View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4285_low_9 (Length: 499)

Name: NF4285_low_9
Description: NF4285
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4285_low_9
NF4285_low_9
[»] chr3 (13 HSPs)
chr3 (16-262)||(39453407-39453654)
chr3 (329-485)||(39453035-39453191)
chr3 (360-481)||(53581276-53581397)
chr3 (361-485)||(52585634-52585758)
chr3 (357-481)||(20685395-20685525)
chr3 (254-296)||(39453358-39453400)
chr3 (409-485)||(8726868-8726944)
chr3 (409-485)||(9078755-9078831)
chr3 (409-461)||(4136399-4136451)
chr3 (274-332)||(8726675-8726733)
chr3 (274-332)||(9078562-9078620)
chr3 (273-317)||(20685192-20685236)
chr3 (273-332)||(53581072-53581132)
[»] chr6 (3 HSPs)
chr6 (357-485)||(15610095-15610223)
chr6 (357-481)||(5827563-5827687)
chr6 (273-332)||(15609896-15609955)
[»] chr7 (9 HSPs)
chr7 (361-485)||(26754864-26754988)
chr7 (357-481)||(22911163-22911287)
chr7 (357-485)||(13596904-13597032)
chr7 (361-485)||(23040063-23040188)
chr7 (361-485)||(23586180-23586304)
chr7 (357-485)||(48859428-48859556)
chr7 (408-481)||(15026349-15026422)
chr7 (273-327)||(22910960-22911014)
chr7 (284-332)||(48859241-48859289)
[»] chr1 (7 HSPs)
chr1 (357-485)||(42132023-42132151)
chr1 (360-485)||(44022174-44022299)
chr1 (388-485)||(30939638-30939735)
chr1 (384-465)||(43896445-43896526)
chr1 (395-458)||(32924064-32924127)
chr1 (273-332)||(30939875-30939934)
chr1 (376-477)||(39220923-39221024)
[»] chr4 (5 HSPs)
chr4 (357-485)||(48026102-48026230)
chr4 (361-479)||(39774850-39774970)
chr4 (385-448)||(18570362-18570425)
chr4 (379-483)||(15020640-15020744)
chr4 (277-332)||(48026372-48026427)
[»] chr2 (7 HSPs)
chr2 (357-481)||(18579522-18579646)
chr2 (358-485)||(5849119-5849246)
chr2 (361-479)||(15745565-15745683)
chr2 (376-485)||(33170921-33171029)
chr2 (357-485)||(19051561-19051689)
chr2 (273-332)||(18579790-18579849)
chr2 (273-317)||(5848920-5848964)
[»] chr8 (6 HSPs)
chr8 (357-485)||(17834382-17834510)
chr8 (357-485)||(10260415-10260543)
chr8 (357-487)||(8783544-8783674)
chr8 (377-485)||(9604975-9605083)
chr8 (357-465)||(8871860-8871968)
chr8 (273-332)||(10260216-10260275)
[»] chr5 (3 HSPs)
chr5 (357-477)||(32295863-32295982)
chr5 (363-485)||(17237448-17237570)
chr5 (377-485)||(20174547-20174655)
[»] scaffold0913 (2 HSPs)
scaffold0913 (376-485)||(3529-3638)
scaffold0913 (271-327)||(3327-3383)
[»] scaffold0898 (2 HSPs)
scaffold0898 (376-485)||(1963-2072)
scaffold0898 (271-327)||(2218-2274)


Alignment Details
Target: chr3 (Bit Score: 219; Significance: 1e-120; HSPs: 13)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 16 - 262
Target Start/End: Complemental strand, 39453654 - 39453407
Alignment:
Q  16 cagtatgaaggactctttggttgtattggtagtttgagagactcattataagtggctgggctgtgttgaaagtgataggattattgtatctatgactacg 115  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39453654 cagtatgaaggactctttggttgtattggtagtttgagagactcattataagtggctgggctgtgttgaaagtgataggattattgtatctatgactacg 39453555  T
Q  116 agtggagtgggggtnnnnnnn-cattatactaaatcacaggtggtagttaaaactagaatttattgtgttctattagaggcacttctgcttgagctactc 214  Q
    ||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39453554 agtggagtgggggtaaaaaaaacattatactaaatcacaggtggtagttaaaactagaatttattgtgttctattagaggcacttctgcttgagctactc 39453455  T
Q  215 tcttttcattgaccattctagagtttgacttcacaatttacatttaca 262  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  39453454 tcttttcattgaccattctagagtttgacttcacaatttacatttaca 39453407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 133; E-Value: 6e-69
Query Start/End: Original strand, 329 - 485
Target Start/End: Original strand, 39453035 - 39453191
Alignment:
Q  329 tgaaagctagcttgggatatagccgttgtagctaatctatggactgactcatttgtttgtctcctcacaaactccatattagagttgacataatattgtt 428  Q
    |||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||    
T  39453035 tgaaagttagcttaggatatagccgttgtagctaatctatggactgactcatttgtttgtctcctcacaaagtccacattagagttgacataatattgtt 39453134  T
Q  429 caaagatagttttacaattatggatcatcatcccaaattttgtaacatcctgatgtg 485  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||    
T  39453135 caaagatagttttacaattatggatcatcatcccaaattttgtaatatcttgatgtg 39453191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 360 - 481
Target Start/End: Complemental strand, 53581397 - 53581276
Alignment:
Q  360 ctaatctatggactgactcatttgtttgtctcctcacaaactccatattagagttgacataatattgttcaaagatagttttacaattatggatcatcat 459  Q
    ||||||||||| ||| |||||||| ||||||||| |||||||| | | |||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  53581397 ctaatctatgggctgcctcatttgcttgtctccttacaaactcaaaactagagttgacataatattgttcaaagatagttttacaattatggataatcat 53581298  T
Q  460 cccaaattttgtaacatcctga 481  Q
    ||||| ||||||||||||||||    
T  53581297 cccaacttttgtaacatcctga 53581276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 361 - 485
Target Start/End: Original strand, 52585634 - 52585758
Alignment:
Q  361 taatctatggactgactcatttgtttgtctcctcacaaactccatattagagttgacataatattgttcaaagatagttttacaattatggatcatcatc 460  Q
    |||||||||| ||| |||||||| ||||||| |||| ||||| | | ||||||||||||||||||||||||||||||||||||||||||  || ||||||    
T  52585634 taatctatgggctgcctcatttgcttgtctcatcacgaactcaacactagagttgacataatattgttcaaagatagttttacaattataaataatcatc 52585733  T
Q  461 ccaaattttgtaacatcctgatgtg 485  Q
     |||||| |||||||||||||||||    
T  52585734 tcaaattctgtaacatcctgatgtg 52585758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 357 - 481
Target Start/End: Complemental strand, 20685525 - 20685395
Alignment:
Q  357 tagctaatctatggactgactcatttgtttgtctcctcacaaactccatattagagttgacataata------ttgttcaaagatagttttacaattatg 450  Q
    |||||||||||||| ||| |||||||| |||||||||||||||||| | | ||||||||||||||||      |||||||||||||||||| ||||||||    
T  20685525 tagctaatctatgggctgtctcatttgcttgtctcctcacaaactcaacactagagttgacataataataatattgttcaaagatagttttgcaattatg 20685426  T
Q  451 gatcatcatcccaaattttgtaacatcctga 481  Q
    ||| |||||||||||||||||||| ||||||    
T  20685425 gataatcatcccaaattttgtaacttcctga 20685395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 254 - 296
Target Start/End: Complemental strand, 39453400 - 39453358
Alignment:
Q  254 acatttacaactaatctttgtgggaatagaagtttgtataagg 296  Q
    ||||||||||||||||||||||||||||||||||| |||||||    
T  39453400 acatttacaactaatctttgtgggaatagaagtttatataagg 39453358  T

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Target: chr3; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 409 - 485
Target Start/End: Complemental strand, 8726944 - 8726868
Alignment:
Q  409 agagttgacataatattgttcaaagatagttttacaattatggatcatcatcccaaattttgtaacatcctgatgtg 485  Q
    ||||||||||| ||| |||||||||||| ||||||| ||||| || |||||| |||| | ||||||||||| |||||    
T  8726944 agagttgacatgatactgttcaaagataattttacacttatgaataatcatcacaaactctgtaacatcctaatgtg 8726868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 409 - 485
Target Start/End: Complemental strand, 9078831 - 9078755
Alignment:
Q  409 agagttgacataatattgttcaaagatagttttacaattatggatcatcatcccaaattttgtaacatcctgatgtg 485  Q
    ||||||||||| ||| |||||||||||| ||||||| ||||| || |||||| |||| | ||||||||||| |||||    
T  9078831 agagttgacatgatactgttcaaagataattttacacttatgaataatcatcacaaactctgtaacatcctaatgtg 9078755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 409 - 461
Target Start/End: Complemental strand, 4136451 - 4136399
Alignment:
Q  409 agagttgacataatattgttcaaagatagttttacaattatggatcatcatcc 461  Q
    ||||||||||||||||||||||| | ||||||||||| |||| || |||||||    
T  4136451 agagttgacataatattgttcaatggtagttttacaaatatgaataatcatcc 4136399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 274 - 332
Target Start/End: Original strand, 8726675 - 8726733
Alignment:
Q  274 tgggaatagaagtttgtataagggatgatagatgcacttttgttatggtaaaaattgaa 332  Q
    ||||||||  |||||||||||||||||||| ||||||||| ||| ||| ||||| ||||    
T  8726675 tgggaatatgagtttgtataagggatgatatatgcactttcgttttggcaaaaaatgaa 8726733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 274 - 332
Target Start/End: Original strand, 9078562 - 9078620
Alignment:
Q  274 tgggaatagaagtttgtataagggatgatagatgcacttttgttatggtaaaaattgaa 332  Q
    ||||||||  |||||||||||||||||||| ||||||||| ||| ||| ||||| ||||    
T  9078562 tgggaatatgagtttgtataagggatgatatatgcactttcgttttggcaaaaaatgaa 9078620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 273 - 317
Target Start/End: Original strand, 20685192 - 20685236
Alignment:
Q  273 gtgggaatagaagtttgtataagggatgatagatgcacttttgtt 317  Q
    |||||||||| ||||||||||||||||| || || ||||||||||    
T  20685192 gtgggaatagcagtttgtataagggatgttacattcacttttgtt 20685236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 273 - 332
Target Start/End: Original strand, 53581072 - 53581132
Alignment:
Q  273 gtgggaatagaagtttgtata-agggatgatagatgcacttttgttatggtaaaaattgaa 332  Q
    |||||||||| |||||||||| | |||||||| ||||||||||||| ||| ||||| ||||    
T  53581072 gtgggaataggagtttgtatataaggatgatacatgcacttttgttttggcaaaaactgaa 53581132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 93; Significance: 4e-45; HSPs: 3)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 357 - 485
Target Start/End: Complemental strand, 15610223 - 15610095
Alignment:
Q  357 tagctaatctatggactgactcatttgtttgtctcctcacaaactccatattagagttgacataatattgttcaaagatagttttacaattatggatcat 456  Q
    |||||||||||||| ||  ||||||||||||||||||||||||||| | | ||||||||||||| |||||||||||||||||||||||||||||||| ||    
T  15610223 tagctaatctatgggctacctcatttgtttgtctcctcacaaactcaacactagagttgacatagtattgttcaaagatagttttacaattatggataat 15610124  T
Q  457 catcccaaattttgtaacatcctgatgtg 485  Q
    ||||||||||| |||||||||||||||||    
T  15610123 catcccaaattctgtaacatcctgatgtg 15610095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 357 - 481
Target Start/End: Complemental strand, 5827687 - 5827563
Alignment:
Q  357 tagctaatctatggactgactcatttgtttgtctcctcacaaactccatattagagttgacataatattgttcaaagatagttttacaattatggatcat 456  Q
    |||||||| ||||  ||| |||||||| ||||||||| |||||||| | | ||||||||| |||||||||||||||||||||||||||||||||||| ||    
T  5827687 tagctaatgtatgagctgcctcatttgcttgtctccttacaaactcaacactagagttgatataatattgttcaaagatagttttacaattatggataat 5827588  T
Q  457 catcccaaattttgtaacatcctga 481  Q
    |||||||||||||||||||||||||    
T  5827587 catcccaaattttgtaacatcctga 5827563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 273 - 332
Target Start/End: Original strand, 15609896 - 15609955
Alignment:
Q  273 gtgggaatagaagtttgtataagggatgatagatgcacttttgttatggtaaaaattgaa 332  Q
    |||||||||  |||||||||||||||||||| ||||||||||||| ||| ||||| ||||    
T  15609896 gtgggaatatgagtttgtataagggatgatacatgcacttttgttttggcaaaaactgaa 15609955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 89; Significance: 1e-42; HSPs: 9)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 361 - 485
Target Start/End: Complemental strand, 26754988 - 26754864
Alignment:
Q  361 taatctatggactgactcatttgtttgtctcctcacaaactccatattagagttgacataatattgttcaaagatagttttacaattatggatcatcatc 460  Q
    |||||||||| ||| |||||||| |||||||||||||||||| | | || ||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  26754988 taatctatgggctgcctcatttgcttgtctcctcacaaactcaacactatagttgacataatattgttcaaagatagttttacaattatggataatcatc 26754889  T
Q  461 ccaaattttgtaacatcctgatgtg 485  Q
    ||||||| |||||||||||||||||    
T  26754888 ccaaattatgtaacatcctgatgtg 26754864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 357 - 481
Target Start/End: Complemental strand, 22911287 - 22911163
Alignment:
Q  357 tagctaatctatggactgactcatttgtttgtctcctcacaaactccatattagagttgacataatattgttcaaagatagttttacaattatggatcat 456  Q
    |||||||||||||| ||  |||||||| ||||||||| |||||||| | | |||||||||||||||||||||||||||||||||||||||||||||| ||    
T  22911287 tagctaatctatggcctccctcatttgcttgtctccttacaaactcaaaactagagttgacataatattgttcaaagatagttttacaattatggataat 22911188  T
Q  457 catcccaaattttgtaacatcctga 481  Q
    ||||||||||| |||||||||||||    
T  22911187 catcccaaattctgtaacatcctga 22911163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 357 - 485
Target Start/End: Complemental strand, 13597032 - 13596904
Alignment:
Q  357 tagctaatctatggactgactcatttgtttgtctcctcacaaactccatattagagttgacataatattgttcaaagatagttttacaattatggatcat 456  Q
    ||||||||||| || ||| |||||||| |||||||||||||||||| | | ||||||||||||| ||||||||||||||||||||||||||||| || ||    
T  13597032 tagctaatctaggggctgcctcatttgcttgtctcctcacaaactcaacactagagttgacatagtattgttcaaagatagttttacaattatgaattat 13596933  T
Q  457 catcccaaattttgtaacatcctgatgtg 485  Q
    ||||||||||| ||||| |||||||||||    
T  13596932 catcccaaattctgtaaaatcctgatgtg 13596904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 361 - 485
Target Start/End: Original strand, 23040063 - 23040188
Alignment:
Q  361 taatctatggactgactcatttgtttg-tctcctcacaaactccatattagagttgacataatattgttcaaagatagttttacaattatggatcatcat 459  Q
    |||||||||| ||| |||||||| ||| |||||| |||||||| | | |||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  23040063 taatctatgggctgcctcatttgcttggtctccttacaaactcaacactagagttgacataatattgttcaaagatagttttacaattatggataatcat 23040162  T
Q  460 cccaaattttgtaacatcctgatgtg 485  Q
    | |||||| |||||||||||||||||    
T  23040163 cgcaaattctgtaacatcctgatgtg 23040188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 361 - 485
Target Start/End: Complemental strand, 23586304 - 23586180
Alignment:
Q  361 taatctatggactgactcatttgtttgtctcctcacaaactccatattagagttgacataatattgttcaaagatagttttacaattatggatcatcatc 460  Q
    ||||||||||  || ||||||||||||||||||||||||||  | ||||  ||||||||||||||||||||||||||||||||||||||| || ||||||    
T  23586304 taatctatgggttgtctcatttgtttgtctcctcacaaactgaacattaaggttgacataatattgttcaaagatagttttacaattatgaataatcatc 23586205  T
Q  461 ccaaattttgtaacatcctgatgtg 485  Q
    ||||| ||||||||||| |||||||    
T  23586204 ccaaactttgtaacatcttgatgtg 23586180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 357 - 485
Target Start/End: Complemental strand, 48859556 - 48859428
Alignment:
Q  357 tagctaatctatggactgactcatttgtttgtctcctcacaaactccatattagagttgacataatattgttcaaagatagttttacaattatggatcat 456  Q
    |||||| ||||| ||||| || ||||| ||||||| |||||||||| | | ||||||||| ||||||||||||| ||||||||||||||||||| || ||    
T  48859556 tagctagtctatagactgccttatttgcttgtctcttcacaaactcaacactagagttgatataatattgttcatagatagttttacaattatgaataat 48859457  T
Q  457 catcccaaattttgtaacatcctgatgtg 485  Q
    ||||||||||| || ||||||||||||||    
T  48859456 catcccaaattctgcaacatcctgatgtg 48859428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 408 - 481
Target Start/End: Complemental strand, 15026422 - 15026349
Alignment:
Q  408 tagagttgacataatattgttcaaagatagttttacaattatggatcatcatcccaaattttgtaacatcctga 481  Q
    ||||||||||||||||||||||||||||||||| |||| ||||||| ||||||||||||| |||||||||||||    
T  15026422 tagagttgacataatattgttcaaagatagtttaacaaatatggataatcatcccaaattatgtaacatcctga 15026349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 273 - 327
Target Start/End: Original strand, 22910960 - 22911014
Alignment:
Q  273 gtgggaatagaagtttgtataagggatgatagatgcacttttgttatggtaaaaa 327  Q
    |||||||||| ||| |||||||||||||||| ||| ||||||||| ||| |||||    
T  22910960 gtgggaataggagtctgtataagggatgatacatgtacttttgttttggcaaaaa 22911014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 284 - 332
Target Start/End: Original strand, 48859241 - 48859289
Alignment:
Q  284 agtttgtataagggatgatagatgcacttttgttatggtaaaaattgaa 332  Q
    |||||||||||||||||||| ||||| ||||||| ||| ||||| ||||    
T  48859241 agtttgtataagggatgatacatgcatttttgttttggcaaaaactgaa 48859289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 89; Significance: 1e-42; HSPs: 7)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 357 - 485
Target Start/End: Complemental strand, 42132151 - 42132023
Alignment:
Q  357 tagctaatctatggactgactcatttgtttgtctcctcacaaactccatattagagttgacataatattgttcaaagatagttttacaattatggatcat 456  Q
    ||||||||||||||  || ||||||||||||||||||||||||||| | | ||||||||| |||||||||||||||||||||||||| ||||||||| ||    
T  42132151 tagctaatctatgggttgcctcatttgtttgtctcctcacaaactcaacactagagttgatataatattgttcaaagatagttttacgattatggataat 42132052  T
Q  457 catcccaaattttgtaacatcctgatgtg 485  Q
    ||||||||||| |||||||||||||||||    
T  42132051 catcccaaattatgtaacatcctgatgtg 42132023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 360 - 485
Target Start/End: Complemental strand, 44022299 - 44022174
Alignment:
Q  360 ctaatctatggactgactcatttgtttgtctcctcacaaactccatattagagttgacataatattgttcaaagatagttttacaattatggatcatcat 459  Q
    ||||||||||  ||| ||||||||||||||| ||||||||||| | | ||||||||||||| |||||||||||||||||||| ||||||||||| |||||    
T  44022299 ctaatctatgagctgtctcatttgtttgtcttctcacaaactcaacactagagttgacatagtattgttcaaagatagttttgcaattatggataatcat 44022200  T
Q  460 cccaaattttgtaacatcctgatgtg 485  Q
    |||||||| ||||||||||| |||||    
T  44022199 cccaaattatgtaacatcctaatgtg 44022174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 388 - 485
Target Start/End: Original strand, 30939638 - 30939735
Alignment:
Q  388 tctcctcacaaactccatattagagttgacataatattgttcaaagatagttttacaattatggatcatcatcccaaattttgtaacatcctgatgtg 485  Q
    |||| ||||||||||  |||||||||||  ||||||||| ||||||||||||||| ||||||| || ||||||||||||||||||||||| |||||||    
T  30939638 tctcatcacaaactcattattagagttggtataatattgatcaaagatagttttaaaattatgaataatcatcccaaattttgtaacatcttgatgtg 30939735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 384 - 465
Target Start/End: Complemental strand, 43896526 - 43896445
Alignment:
Q  384 tttgtctcctcacaaactccatattagagttgacataatattgttcaaagatagttttacaattatggatcatcatcccaaa 465  Q
    ||||||||||||||||||| |||    |||||| ||||||||||||||||||||||||||||||||| || ||||| |||||    
T  43896526 tttgtctcctcacaaactcaatacggaagttgatataatattgttcaaagatagttttacaattatgaataatcattccaaa 43896445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 395 - 458
Target Start/End: Complemental strand, 32924127 - 32924064
Alignment:
Q  395 acaaactccatattagagttgacataatattgttcaaagatagttttacaattatggatcatca 458  Q
    |||||||| | | |||||||||||| |||||||||||||||||||||||||||| |||| ||||    
T  32924127 acaaactcaacactagagttgacatgatattgttcaaagatagttttacaattaaggataatca 32924064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 273 - 332
Target Start/End: Complemental strand, 30939934 - 30939875
Alignment:
Q  273 gtgggaatagaagtttgtataagggatgatagatgcacttttgttatggtaaaaattgaa 332  Q
    |||||||||  |||||||||||||||||||| ||||||||| ||| ||| ||||| ||||    
T  30939934 gtgggaataagagtttgtataagggatgatacatgcactttcgttttggcaaaaactgaa 30939875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 376 - 477
Target Start/End: Complemental strand, 39221024 - 39220923
Alignment:
Q  376 ctcatttgtttgtctcctcacaaactccatattagagttgacataatattgttcaaagatagttttacaattatggatcatcatcccaaattttgtaaca 475  Q
    ||||||||| || ||||| |||||||| | ||| ||||| |  ||||||||||  || ||| ||||||||||||| ||  |||||||||| ||||| |||    
T  39221024 ctcatttgtctgcctccttacaaactcaacattggagttaatgtaatattgtttgaaaataattttacaattatgaatagtcatcccaaactttgtgaca 39220925  T
Q  476 tc 477  Q
    ||    
T  39220924 tc 39220923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 81; Significance: 6e-38; HSPs: 5)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 357 - 485
Target Start/End: Original strand, 48026102 - 48026230
Alignment:
Q  357 tagctaatctatggactgactcatttgtttgtctcctcacaaactccatattagagttgacataatattgttcaaagatagttttacaattatggatcat 456  Q
    |||||||||||||| |||  ||||||| ||||||||||  |||||| | | ||||||||||||||||||||||||||||||||||||||||||| || ||    
T  48026102 tagctaatctatgggctgcttcatttgcttgtctcctcgtaaactcaacactagagttgacataatattgttcaaagatagttttacaattatgaataat 48026201  T
Q  457 catcccaaattttgtaacatcctgatgtg 485  Q
    ||||||||| |||||||||||||||||||    
T  48026202 catcccaaaatttgtaacatcctgatgtg 48026230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 361 - 479
Target Start/End: Complemental strand, 39774970 - 39774850
Alignment:
Q  361 taatctatggactgactcatttgtttgtctcctcacaaactccatattagagttgacataa-tattgttcaaagatag-ttttacaattatggatcatca 458  Q
    ||||||||||| || || |||||||||||||||||||||||| | | || ||||||||||| || | |||||| |||| |||||| |||||| || ||||    
T  39774970 taatctatggattgccttatttgtttgtctcctcacaaactcaacactaaagttgacataattaatattcaaaaatagtttttacgattatgaataatca 39774871  T
Q  459 tcccaaattttgtaacatcct 479  Q
    |||||||||||||||||||||    
T  39774870 tcccaaattttgtaacatcct 39774850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 385 - 448
Target Start/End: Original strand, 18570362 - 18570425
Alignment:
Q  385 ttgtctcctcacaaactccatattagagttgacataatattgttcaaagatagttttacaatta 448  Q
    |||||||||||||||||| | | ||||||||| ||||||||||||||||||| |||||||||||    
T  18570362 ttgtctcctcacaaactcaacactagagttgatataatattgttcaaagatatttttacaatta 18570425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 379 - 483
Target Start/End: Complemental strand, 15020744 - 15020640
Alignment:
Q  379 atttgtttgtctcctcacaaactccatattagagttgacataatattgttcaaagatagttttacaattatggatcatcatcccaaattttgtaacatcc 478  Q
    ||||||||||||  |||||||||| | ||||||||| ||||||||||   | ||||||||| ||||||||| ||| ||||| ||| | |||||| ||||     
T  15020744 atttgtttgtcttttcacaaactcaacattagagtttacataatattagccgaagatagttctacaattatagattatcattccatactttgtagcatca 15020645  T
Q  479 tgatg 483  Q
    |||||    
T  15020644 tgatg 15020640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 277 - 332
Target Start/End: Complemental strand, 48026427 - 48026372
Alignment:
Q  277 gaatagaagtttgtataagggatgatagatgcacttttgttatggtaaaaattgaa 332  Q
    |||||| |||||||||||||||||||| ||||||||||||| ||| ||||| ||||    
T  48026427 gaataggagtttgtataagggatgatacatgcacttttgttttggcaaaaactgaa 48026372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 81; Significance: 6e-38; HSPs: 7)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 357 - 481
Target Start/End: Original strand, 18579522 - 18579646
Alignment:
Q  357 tagctaatctatggactgactcatttgtttgtctcctcacaaactccatattagagttgacataatattgttcaaagatagttttacaattatggatcat 456  Q
    |||||||||||||| ||| ||||||||||||||||||||||||||| | | || ||||||||||||||||||| ||||||||||||||||||| ||| ||    
T  18579522 tagctaatctatgggctgcctcatttgtttgtctcctcacaaactcaacactaaagttgacataatattgttctaagatagttttacaattatagattat 18579621  T
Q  457 catcccaaattttgtaacatcctga 481  Q
    ||||||||||| ||||||| |||||    
T  18579622 catcccaaattctgtaacaacctga 18579646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 358 - 485
Target Start/End: Complemental strand, 5849246 - 5849119
Alignment:
Q  358 agctaatctatggactgactcatttgtttgtctcctcacaaactccatattagagttgacataatattgttcaaagatagttttacaattatggatcatc 457  Q
    ||||||||||||  ||| ||||||||||||||||||||||||||| | | |||||||||||||| |||||||||||||||||||| ||||||  || |||    
T  5849246 agctaatctatgagctgcctcatttgtttgtctcctcacaaactcaacactagagttgacataacattgttcaaagatagttttataattataaataatc 5849147  T
Q  458 atcccaaattttgtaacatcctgatgtg 485  Q
    |||||| ||| |||||||||||||||||    
T  5849146 atcccacattatgtaacatcctgatgtg 5849119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 361 - 479
Target Start/End: Original strand, 15745565 - 15745683
Alignment:
Q  361 taatctatggactgactcatttgtttgtctcctcacaaactccatattagagttgacataatattgttcaaagatagttttacaattatggatcatcatc 460  Q
    |||||||||| ||| |||||||| ||||||||| ||||| || | || |||||||||||||||||||||||| |||||||||||||||||||| ||||||    
T  15745565 taatctatgggctgtctcatttgcttgtctccttacaaattcaacataagagttgacataatattgttcaaatatagttttacaattatggataatcatc 15745664  T
Q  461 ccaaattttgtaacatcct 479  Q
    ||||||| |||||||||||    
T  15745665 ccaaattctgtaacatcct 15745683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 376 - 485
Target Start/End: Original strand, 33170921 - 33171029
Alignment:
Q  376 ctcatttgtttgtctcctcacaaactccatattagagttgacataatattgttcaaagatagttttacaattatggatcatcatcccaaattttgtaaca 475  Q
    |||||||| |||||||||||  ||||| | | ||||||||||||||||||||||||||||||||||||||||||| || ||||| ||||| | |||||||    
T  33170921 ctcatttgcttgtctcctcaagaactcaaaactagagttgacataatattgttcaaagatagttttacaattatgaataatcat-ccaaactctgtaaca 33171019  T
Q  476 tcctgatgtg 485  Q
    ||||||||||    
T  33171020 tcctgatgtg 33171029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 357 - 485
Target Start/End: Complemental strand, 19051689 - 19051561
Alignment:
Q  357 tagctaatctatggactgactcatttgtttgtctcctcacaaactccatattagagttgacataatattgttcaaagatagttttacaattatggatcat 456  Q
    |||||||||||| | |||  ||||||  ||||||| |||||||||| | |||| ||||| | |||||||||||||| ||||||||||| ||||| || ||    
T  19051689 tagctaatctattggctgcttcattttcttgtctcttcacaaactcaacattatagttgtcgtaatattgttcaaatatagttttacacttatgaataat 19051590  T
Q  457 catcccaaattttgtaacatcctgatgtg 485  Q
    |||||| || | |||||||| ||||||||    
T  19051589 catcccgaactatgtaacattctgatgtg 19051561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 273 - 332
Target Start/End: Complemental strand, 18579849 - 18579790
Alignment:
Q  273 gtgggaatagaagtttgtataagggatgatagatgcacttttgttatggtaaaaattgaa 332  Q
    |||||||||| |||||||||||||||||||| | ||||||||||| ||| ||||| ||||    
T  18579849 gtgggaataggagtttgtataagggatgatacaggcacttttgttttggcaaaaactgaa 18579790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 273 - 317
Target Start/End: Original strand, 5848920 - 5848964
Alignment:
Q  273 gtgggaatagaagtttgtataagggatgatagatgcacttttgtt 317  Q
    |||||||||| |||||||||||| ||||||| |||||||||||||    
T  5848920 gtgggaataggagtttgtataagagatgatacatgcacttttgtt 5848964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 77; Significance: 2e-35; HSPs: 6)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 357 - 485
Target Start/End: Original strand, 17834382 - 17834510
Alignment:
Q  357 tagctaatctatggactgactcatttgtttgtctcctcacaaactccatattagagttgacataatattgttcaaagatagttttacaattatggatcat 456  Q
    ||||||||||||||  || ||||||||||||||||||||||||||| | | ||||||||||||| |||| ||||||||||| | |||||||||| || ||    
T  17834382 tagctaatctatgggttgtctcatttgtttgtctcctcacaaactcaacactagagttgacatagtattattcaaagatagctatacaattatgaataat 17834481  T
Q  457 catcccaaattttgtaacatcctgatgtg 485  Q
    ||||||||||| |||||||||||||||||    
T  17834482 catcccaaattctgtaacatcctgatgtg 17834510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 357 - 485
Target Start/End: Complemental strand, 10260543 - 10260415
Alignment:
Q  357 tagctaatctatggactgactcatttgtttgtctcctcacaaactccatattagagttgacataatattgttcaaagatagttttacaattatggatcat 456  Q
    |||| ||||||||| ||  |||||||| ||||||| ||| |||||| | | ||||||||||||| ||||||||||||||||||||||||||||| || ||    
T  10260543 tagcaaatctatgggctacctcatttgcttgtctcttcagaaactcaacactagagttgacatagtattgttcaaagatagttttacaattatgaataat 10260444  T
Q  457 catcccaaattttgtaacatcctgatgtg 485  Q
    ||||||||||| ||||||||| |||||||    
T  10260443 catcccaaattatgtaacatcatgatgtg 10260415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 357 - 487
Target Start/End: Complemental strand, 8783674 - 8783544
Alignment:
Q  357 tagctaatctatggactgactcatttgtttgtctcctcacaaactccatattagagttgacataatattgttcaaagatagttttacaattatggatcat 456  Q
    |||||||||||||| ||| ||| |||  ||||||| |||||||||| | | ||||||  ||||||| || |||||| ||||||||||||||||| || ||    
T  8783674 tagctaatctatgggctgcctcgtttccttgtctcgtcacaaactcaacactagagtcaacataatgtttttcaaatatagttttacaattatgtataat 8783575  T
Q  457 catcccaaattttgtaacatcctgatgtgaa 487  Q
    || ||||||||||||||||||||||| ||||    
T  8783574 caccccaaattttgtaacatcctgatatgaa 8783544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 377 - 485
Target Start/End: Original strand, 9604975 - 9605083
Alignment:
Q  377 tcatttgtttgtctcctcacaaactccatattagagttgacataatattgttcaaagatagttttacaattatggatcatcatcccaaattttgtaacat 476  Q
    |||| ||||||||||||||||||||| | | ||||||||| ||||||||||| ||||||| ||||||||||||| || |||||| |||| | | ||||||    
T  9604975 tcatctgtttgtctcctcacaaactcaacactagagttgatataatattgtttaaagataattttacaattatgaataatcatcacaaactctataacat 9605074  T
Q  477 cctgatgtg 485  Q
    | |||||||    
T  9605075 cttgatgtg 9605083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 357 - 465
Target Start/End: Original strand, 8871860 - 8871968
Alignment:
Q  357 tagctaatctatggactgactcatttgtttgtctcctcacaaactccatattagagttgacataatattgttcaaagatagttttacaattatggatcat 456  Q
    |||||||| ||||| ||  |||||||| |||| ||||||||||||| | | || |||| ||||||||||||||||| ||| ||||| ||||||| || ||    
T  8871860 tagctaatttatgggctacctcatttgcttgtatcctcacaaactcaacactaaagttaacataatattgttcaaaaataattttataattatgaataat 8871959  T
Q  457 catcccaaa 465  Q
    |||||||||    
T  8871960 catcccaaa 8871968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 273 - 332
Target Start/End: Original strand, 10260216 - 10260275
Alignment:
Q  273 gtgggaatagaagtttgtataagggatgatagatgcacttttgttatggtaaaaattgaa 332  Q
    |||||||||| |||||||||||||||||||| ||||||||||||| ||||||||| ||||    
T  10260216 gtgggaataggagtttgtataagggatgatacatgcacttttgttttggtaaaaactgaa 10260275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 77; Significance: 2e-35; HSPs: 3)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 357 - 477
Target Start/End: Original strand, 32295863 - 32295982
Alignment:
Q  357 tagctaatctatggactgactcatttgtttgtctcctcacaaactccatattagagttgacataatattgttcaaagatagttttacaattatggatcat 456  Q
    |||||||||||||| ||| ||||||||||||||| ||||||||||| | | |||||||||||| ||||||||||||||||||||||||||||||||| ||    
T  32295863 tagctaatctatgg-ctgcctcatttgtttgtcttctcacaaactcaacactagagttgacatgatattgttcaaagatagttttacaattatggataat 32295961  T
Q  457 catcccaaattttgtaacatc 477  Q
    ||||||||||| || ||||||    
T  32295962 catcccaaattctgcaacatc 32295982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 363 - 485
Target Start/End: Original strand, 17237448 - 17237570
Alignment:
Q  363 atctatggactgactcatttgtttgtctcctcacaaactccatattagagttgacataatattgttcaaagatagttttacaattatggatcatcatccc 462  Q
    |||||||  ||| |||||||||||| |||||||||||||| | | ||||||||||||| ||||||| ||||||||||||||| ||||| || ||||||||    
T  17237448 atctatgtgctgcctcatttgtttgcctcctcacaaactcaacactagagttgacatagtattgtttaaagatagttttacagttatgaataatcatccc 17237547  T
Q  463 aaattttgtaacatcctgatgtg 485  Q
    || || ||||||||| |||||||    
T  17237548 aatttctgtaacatcatgatgtg 17237570  T

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Target: chr5; HSP #3
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 377 - 485
Target Start/End: Complemental strand, 20174655 - 20174547
Alignment:
Q  377 tcatttgtttgtctcctcacaaactccatattagagttgacataatattgttcaaagatagttttacaattatggatcatcatcccaaattttgtaacat 476  Q
    ||||||| |||||||||||||||||| | | |||| |||||||||||||||||||||||||||||||||||||| || |||||| |||| | | ||||||    
T  20174655 tcatttgcttgtctcctcacaaactcaacactagaattgacataatattgttcaaagatagttttacaattatgaataatcatctcaaactctataacat 20174556  T
Q  477 cctgatgtg 485  Q
    | |||||||    
T  20174555 cttgatgtg 20174547  T

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Target: scaffold0913 (Bit Score: 58; Significance: 3e-24; HSPs: 2)
Name: scaffold0913
Description:

Target: scaffold0913; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 376 - 485
Target Start/End: Complemental strand, 3638 - 3529
Alignment:
Q  376 ctcatttgtttgtctcctcacaaactccatattagagttgacataatattgttcaaagatagttttacaattatggatcatcatcccaaattttgtaaca 475  Q
    |||||||| ||||||||||||||| || | | ||||||| ||||||||| ||||||||||| ||||||||||||| || || |||||||| | |||||||    
T  3638 ctcatttgcttgtctcctcacaaattcaacactagagttcacataatatcgttcaaagataattttacaattatgaataattatcccaaactctgtaaca 3539  T
Q  476 tcctgatgtg 485  Q
    ||||||||||    
T  3538 tcctgatgtg 3529  T

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Target: scaffold0913; HSP #2
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 271 - 327
Target Start/End: Original strand, 3327 - 3383
Alignment:
Q  271 ttgtgggaatagaagtttgtataagggatgatagatgcacttttgttatggtaaaaa 327  Q
    |||||| ||||  |||||||||||||||||||| || |||||||||| ||| |||||    
T  3327 ttgtggaaataagagtttgtataagggatgatacatacacttttgttttggcaaaaa 3383  T

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Target: scaffold0898 (Bit Score: 58; Significance: 3e-24; HSPs: 2)
Name: scaffold0898
Description:

Target: scaffold0898; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 376 - 485
Target Start/End: Original strand, 1963 - 2072
Alignment:
Q  376 ctcatttgtttgtctcctcacaaactccatattagagttgacataatattgttcaaagatagttttacaattatggatcatcatcccaaattttgtaaca 475  Q
    |||||||| ||||||||||||||| || | | ||||||| ||||||||| ||||||||||| ||||||||||||| || || |||||||| | |||||||    
T  1963 ctcatttgcttgtctcctcacaaattcaacactagagttcacataatatcgttcaaagataattttacaattatgaataattatcccaaactctgtaaca 2062  T
Q  476 tcctgatgtg 485  Q
    ||||||||||    
T  2063 tcctgatgtg 2072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0898; HSP #2
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 271 - 327
Target Start/End: Complemental strand, 2274 - 2218
Alignment:
Q  271 ttgtgggaatagaagtttgtataagggatgatagatgcacttttgttatggtaaaaa 327  Q
    |||||| ||||  |||||||||||||||||||| || |||||||||| ||| |||||    
T  2274 ttgtggaaataagagtttgtataagggatgatacatacacttttgttttggcaaaaa 2218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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