View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4286_high_5 (Length: 344)
Name: NF4286_high_5
Description: NF4286
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4286_high_5 |
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Alignment Details
Target: chr6 (Bit Score: 266; Significance: 1e-148; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 266; E-Value: 1e-148
Query Start/End: Original strand, 14 - 283
Target Start/End: Original strand, 6066897 - 6067166
Alignment:
| Q |
14 |
ctttggtcacaagttctttggctaaggaatgaaaatcatcaacttatagagaaacttaaccatgtttctgagaatcatgatcaagttgttcaagagaatg |
113 |
Q |
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| T |
6066897 |
ctttggtcacaagttctttggctaaggaatgaaaatcatcaacttatagagaaacttaaccatgtttctgagaatcatgatcaagttgttcaagagaatg |
6066996 |
T |
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| Q |
114 |
ctcagcttaaagaagaagctttggaacttcgacaaatgataaaagatatgcagattcatagtcctttaatcccttcttttagtcctttggatgatacata |
213 |
Q |
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| T |
6066997 |
ctcagcttaaagaagaagctttggaacttcgacaaatgataaaagatatgcagattcatagtcctttaatcccttcttttagtcctttggatgatacata |
6067096 |
T |
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| Q |
214 |
tcttagagatgattcttcaaacaattccatctcaagttcaatggatcttcttggctgatttcaagacaaa |
283 |
Q |
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| T |
6067097 |
tcttagagatgattcttcaaacaattccatctcaagttcaatggatcttcttggttgatttcaagacaaa |
6067166 |
T |
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Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 14 - 151
Target Start/End: Original strand, 5744891 - 5745028
Alignment:
| Q |
14 |
ctttggtcacaagttctttggctaaggaatgaaaatcatcaacttatagagaaacttaaccatgtttctgagaatcatgatcaagttgttcaagagaatg |
113 |
Q |
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||||||||||||||| |||||||||||||||||||||||||| | |||| || || ||| || | | ||||| ||||||| ||||||| |||||||||| |
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| T |
5744891 |
ctttggtcacaagttgtttggctaaggaatgaaaatcatcaattactagataagctcaacaatttctgtgagactcatgataaagttgtccaagagaatg |
5744990 |
T |
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| Q |
114 |
ctcagcttaaagaagaagctttggaacttcgacaaatg |
151 |
Q |
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| T |
5744991 |
ttcaattgaaagaacaagcttcggaacttcgacaaatg |
5745028 |
T |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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