View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4286_low_13 (Length: 264)
Name: NF4286_low_13
Description: NF4286
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4286_low_13 |
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Alignment Details
Target: chr4 (Bit Score: 232; Significance: 1e-128; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 14 - 245
Target Start/End: Complemental strand, 22363777 - 22363546
Alignment:
| Q |
14 |
caaaaaccataaccacccttttgttcttcctccttcttggaggagtgaccataacaatgtgtgaagatgaagaaagagaagaagggtcatcatcaaactt |
113 |
Q |
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| T |
22363777 |
caaaaaccataaccacccttttgttcttcctccttcttggaggagtgaccataacaatgtgtgaagatgaagaaagagaagaagggtcatcatcaaactt |
22363678 |
T |
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| Q |
114 |
attcttgatgcaaaactcaaagagtgttgtcaaaactcatgcaggagaattgaggttgtttaaaaacaatgatgataggtttttggataggcacatgcac |
213 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
22363677 |
attcttgatgcaaaactcaaagagtgttgtcaaaactcatgcaggagaattgaggttgtttaaaaacaatgatgataggtttttggataggcacatgcac |
22363578 |
T |
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| Q |
214 |
attggtttgcttaatatggaaccaagatcctg |
245 |
Q |
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|||||||||||||||||||||||||||||||| |
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| T |
22363577 |
attggtttgcttaatatggaaccaagatcctg |
22363546 |
T |
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