View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4286_low_15 (Length: 230)
Name: NF4286_low_15
Description: NF4286
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4286_low_15 |
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Alignment Details
Target: chr1 (Bit Score: 196; Significance: 1e-107; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 196; E-Value: 1e-107
Query Start/End: Original strand, 4 - 215
Target Start/End: Complemental strand, 51991171 - 51990960
Alignment:
| Q |
4 |
tttaatatgaaacaaacgagtctgaatccagataacaacgacgtaaaccctagaaacagaaacgacgcgtatcctaatgctattgctatgtccgtttgca |
103 |
Q |
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| T |
51991171 |
tttaatatgaaacaaacgagtctgaatccagataacaacgacgtaaaccctagaaacagaaacgacgcgtatcctaatgctattgctatgtccgtttgca |
51991072 |
T |
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| Q |
104 |
cgcaaaaggaattgctcaccgtacacgtgtccatatcctttagtgtcctcgccatcgatgttcccgccgcactcgccgataatagcagatacgcgaaaac |
203 |
Q |
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|||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
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| T |
51991071 |
cgcagaacgaattgctcaccgtacacgtgtccatatcctttagtgtcctcgccatcgatgttcctgccgcactcgccgataatagcagatacgcgaaaat |
51990972 |
T |
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| Q |
204 |
ctgcaccaccag |
215 |
Q |
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|||||||||||| |
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| T |
51990971 |
ctgcaccaccag |
51990960 |
T |
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