View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4287-Insertion-1 (Length: 110)

Name: NF4287-Insertion-1
Description: NF4287
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4287-Insertion-1
NF4287-Insertion-1
[»] chr1 (35 HSPs)
chr1 (1-88)||(26652623-26652710)
chr1 (1-53)||(21663086-21663138)
chr1 (2-49)||(24464664-24464711)
chr1 (1-49)||(15542308-15542356)
chr1 (1-49)||(27912113-27912161)
chr1 (1-50)||(7221565-7221614)
chr1 (1-50)||(14235283-14235332)
chr1 (7-51)||(15526804-15526848)
chr1 (1-45)||(28009795-28009839)
chr1 (5-53)||(33192405-33192453)
chr1 (9-51)||(14782587-14782629)
chr1 (7-53)||(22426511-22426557)
chr1 (1-51)||(22621842-22621892)
chr1 (9-50)||(26611330-26611371)
chr1 (1-50)||(27973352-27973401)
chr1 (1-49)||(729185-729233)
chr1 (1-49)||(18527496-18527544)
chr1 (1-49)||(26647357-26647405)
chr1 (11-50)||(22624675-22624714)
chr1 (7-49)||(16817108-16817150)
chr1 (7-49)||(18734585-18734627)
chr1 (11-49)||(22507381-22507419)
chr1 (7-49)||(22665841-22665883)
chr1 (7-49)||(25402435-25402477)
chr1 (1-50)||(15630932-15630981)
chr1 (1-49)||(11845221-11845269)
chr1 (5-49)||(12210318-12210362)
chr1 (1-33)||(15158804-15158836)
chr1 (1-33)||(16114849-16114881)
chr1 (1-49)||(17016814-17016862)
chr1 (1-49)||(18827445-18827493)
chr1 (7-47)||(26022440-26022480)
chr1 (1-49)||(27116223-27116271)
chr1 (1-49)||(44797167-44797215)
chr1 (1-40)||(21536915-21536954)
[»] chr3 (30 HSPs)
chr3 (1-51)||(22470400-22470450)
chr3 (1-39)||(8765723-8765761)
chr3 (1-39)||(8770613-8770651)
chr3 (1-50)||(2508718-2508767)
chr3 (5-50)||(18535823-18535868)
chr3 (1-50)||(19912629-19912678)
chr3 (1-49)||(7805791-7805839)
chr3 (1-49)||(12517339-12517387)
chr3 (1-40)||(12771211-12771250)
chr3 (1-51)||(16242192-16242242)
chr3 (7-49)||(20021817-20021859)
chr3 (9-50)||(20886925-20886966)
chr3 (1-46)||(22247046-22247090)
chr3 (1-46)||(25530734-25530779)
chr3 (5-49)||(819846-819890)
chr3 (7-51)||(16228342-16228386)
chr3 (7-51)||(24516595-24516639)
chr3 (1-49)||(34276437-34276485)
chr3 (1-49)||(52935533-52935581)
chr3 (9-48)||(3429225-3429264)
chr3 (7-49)||(27412658-27412700)
chr3 (1-49)||(1096761-1096808)
chr3 (7-51)||(19533827-19533871)
chr3 (1-49)||(20891645-20891693)
chr3 (1-45)||(25850952-25850996)
chr3 (9-49)||(26092962-26093002)
chr3 (1-49)||(27852603-27852651)
chr3 (1-49)||(31283903-31283951)
chr3 (1-48)||(51118481-51118529)
chr3 (1-40)||(22450498-22450537)
[»] chr7 (42 HSPs)
chr7 (1-49)||(10332453-10332501)
chr7 (1-52)||(1810953-1811004)
chr7 (1-50)||(17887729-17887778)
chr7 (1-50)||(23173684-23173733)
chr7 (1-50)||(26249074-26249123)
chr7 (1-49)||(2565955-2566003)
chr7 (9-49)||(13280816-13280856)
chr7 (5-49)||(18986744-18986788)
chr7 (5-49)||(19001372-19001416)
chr7 (5-53)||(23897293-23897341)
chr7 (1-49)||(39270273-39270320)
chr7 (1-47)||(2505892-2505938)
chr7 (7-49)||(2927929-2927971)
chr7 (1-51)||(3173759-3173809)
chr7 (11-49)||(9078881-9078919)
chr7 (6-47)||(1586245-1586286)
chr7 (1-42)||(5236873-5236914)
chr7 (8-49)||(19154874-19154915)
chr7 (8-49)||(20754273-20754314)
chr7 (1-49)||(1254696-1254743)
chr7 (1-49)||(3585522-3585570)
chr7 (1-49)||(4450720-4450768)
chr7 (1-49)||(6039297-6039345)
chr7 (1-49)||(9767834-9767882)
chr7 (1-49)||(19201322-19201370)
chr7 (6-49)||(1767430-1767473)
chr7 (7-49)||(2506820-2506862)
chr7 (1-51)||(10414277-10414327)
chr7 (7-49)||(13252707-13252749)
chr7 (7-49)||(13287710-13287752)
chr7 (11-49)||(17189710-17189748)
chr7 (1-47)||(21707339-21707385)
chr7 (1-50)||(1589289-1589338)
chr7 (12-49)||(7399387-7399424)
chr7 (1-42)||(8977477-8977518)
chr7 (1-30)||(14195797-14195826)
chr7 (1-49)||(8052429-8052476)
chr7 (1-49)||(9722490-9722538)
chr7 (1-49)||(10611762-10611810)
chr7 (1-49)||(11804747-11804795)
chr7 (6-49)||(6018412-6018455)
chr7 (18-49)||(20577557-20577588)
[»] chr4 (25 HSPs)
chr4 (1-48)||(8968072-8968119)
chr4 (1-49)||(17335355-17335403)
chr4 (1-49)||(25025155-25025203)
chr4 (1-52)||(8928310-8928361)
chr4 (6-49)||(17277899-17277942)
chr4 (1-47)||(12836072-12836118)
chr4 (1-49)||(9849707-9849755)
chr4 (1-49)||(15166517-15166565)
chr4 (1-49)||(12616763-12616811)
chr4 (5-49)||(17218581-17218625)
chr4 (1-49)||(17434483-17434531)
chr4 (1-49)||(19556541-19556588)
chr4 (1-49)||(25096346-25096394)
chr4 (7-49)||(11252129-11252171)
chr4 (4-49)||(1832054-1832099)
chr4 (1-50)||(14573498-14573546)
chr4 (1-50)||(18750873-18750922)
chr4 (5-53)||(9263346-9263394)
chr4 (1-49)||(11782541-11782589)
chr4 (1-49)||(13588757-13588805)
chr4 (1-49)||(19335225-19335273)
chr4 (1-53)||(26047141-26047193)
chr4 (1-53)||(26052322-26052374)
chr4 (10-49)||(22171806-22171845)
chr4 (3-54)||(25940745-25940796)
[»] chr6 (25 HSPs)
chr6 (5-51)||(21687127-21687173)
chr6 (1-40)||(22564558-22564597)
chr6 (7-49)||(9387603-9387645)
chr6 (1-50)||(9338977-9339026)
chr6 (1-50)||(14076445-14076494)
chr6 (1-49)||(1636682-1636730)
chr6 (1-49)||(9848212-9848260)
chr6 (1-49)||(14641681-14641729)
chr6 (1-49)||(14727183-14727231)
chr6 (10-50)||(17822022-17822062)
chr6 (7-50)||(22404253-22404296)
chr6 (1-51)||(21760405-21760455)
chr6 (1-47)||(26820909-26820955)
chr6 (9-50)||(8038049-8038090)
chr6 (1-50)||(10505195-10505244)
chr6 (7-48)||(17379461-17379502)
chr6 (1-42)||(27961263-27961304)
chr6 (1-49)||(9897868-9897916)
chr6 (1-49)||(17384072-17384120)
chr6 (1-49)||(24480073-24480121)
chr6 (1-39)||(13216314-13216353)
chr6 (7-50)||(18171252-18171295)
chr6 (6-49)||(19246330-19246373)
chr6 (9-48)||(23644318-23644357)
chr6 (6-49)||(31878848-31878891)
[»] scaffold0043 (1 HSPs)
scaffold0043 (1-49)||(88436-88484)
[»] chr8 (35 HSPs)
chr8 (1-49)||(13313271-13313319)
chr8 (1-49)||(19705035-19705083)
chr8 (5-49)||(21695413-21695457)
chr8 (1-49)||(20400383-20400431)
chr8 (7-49)||(19265877-19265919)
chr8 (8-49)||(6886726-6886767)
chr8 (6-51)||(12342889-12342934)
chr8 (1-50)||(17650010-17650059)
chr8 (1-50)||(28621653-28621702)
chr8 (1-49)||(5151968-5152016)
chr8 (1-49)||(13833603-13833651)
chr8 (9-49)||(14271898-14271938)
chr8 (9-49)||(21316840-21316880)
chr8 (9-49)||(24380353-24380393)
chr8 (7-47)||(26829468-26829508)
chr8 (6-49)||(25180721-25180764)
chr8 (9-52)||(26139845-26139888)
chr8 (4-47)||(28318558-28318601)
chr8 (1-51)||(4007149-4007199)
chr8 (1-47)||(24583173-24583219)
chr8 (7-49)||(28275324-28275366)
chr8 (11-49)||(29380960-29380998)
chr8 (11-49)||(29765391-29765429)
chr8 (1-46)||(15557416-15557461)
chr8 (1-33)||(15058520-15058552)
chr8 (5-49)||(17510957-17511001)
chr8 (1-49)||(18836841-18836889)
chr8 (9-49)||(22501890-22501930)
chr8 (1-49)||(23867829-23867877)
chr8 (1-33)||(24090894-24090926)
chr8 (1-49)||(25227308-25227356)
chr8 (10-49)||(6286340-6286379)
chr8 (1-40)||(17976280-17976319)
chr8 (1-32)||(24520019-24520050)
chr8 (10-49)||(24750883-24750922)
[»] chr5 (30 HSPs)
chr5 (5-49)||(25572478-25572522)
chr5 (8-49)||(17831749-17831790)
chr5 (1-50)||(29988006-29988055)
chr5 (1-49)||(23214825-23214873)
chr5 (1-49)||(34488906-34488954)
chr5 (1-52)||(20102890-20102941)
chr5 (7-49)||(24142462-24142504)
chr5 (1-51)||(25400736-25400786)
chr5 (1-50)||(19003764-19003813)
chr5 (1-50)||(19761580-19761629)
chr5 (1-46)||(24162014-24162059)
chr5 (1-45)||(15691317-15691361)
chr5 (1-49)||(19053150-19053198)
chr5 (1-49)||(23338940-23338988)
chr5 (11-51)||(26315245-26315285)
chr5 (1-49)||(32415830-32415878)
chr5 (6-49)||(18939574-18939617)
chr5 (7-50)||(20548452-20548495)
chr5 (8-51)||(34132142-34132185)
chr5 (7-49)||(21352970-21353012)
chr5 (1-47)||(22797422-22797468)
chr5 (3-49)||(23110196-23110242)
chr5 (6-40)||(24263759-24263793)
chr5 (7-49)||(24513196-24513238)
chr5 (1-38)||(17469569-17469606)
chr5 (1-50)||(26069298-26069347)
chr5 (2-47)||(26348492-26348537)
chr5 (1-49)||(26117486-26117534)
chr5 (1-49)||(31600075-31600123)
chr5 (11-50)||(28280342-28280381)
[»] chr2 (34 HSPs)
chr2 (1-49)||(17891780-17891828)
chr2 (1-51)||(16157082-16157132)
chr2 (7-48)||(18120546-18120587)
chr2 (1-50)||(21905775-21905824)
chr2 (1-50)||(23010042-23010091)
chr2 (3-51)||(29144686-29144734)
chr2 (7-49)||(25537611-25537653)
chr2 (1-51)||(32130697-32130747)
chr2 (1-51)||(32139332-32139382)
chr2 (1-33)||(28918237-28918269)
chr2 (1-49)||(35680100-35680148)
chr2 (11-51)||(45572363-45572403)
chr2 (11-51)||(45576030-45576070)
chr2 (11-51)||(45579697-45579737)
chr2 (11-51)||(45583364-45583404)
chr2 (11-51)||(45587031-45587071)
chr2 (11-51)||(45590698-45590738)
chr2 (11-51)||(45594365-45594405)
chr2 (11-51)||(45598032-45598072)
chr2 (11-51)||(45601699-45601739)
chr2 (11-51)||(45605366-45605406)
chr2 (11-51)||(45609033-45609073)
chr2 (11-51)||(45612700-45612740)
chr2 (11-51)||(45616367-45616407)
chr2 (1-48)||(29892239-29892286)
chr2 (7-49)||(25196666-25196708)
chr2 (1-51)||(32137910-32137960)
chr2 (1-50)||(23861134-23861183)
chr2 (1-49)||(17351027-17351075)
chr2 (11-51)||(20853140-20853180)
chr2 (1-29)||(27907542-27907570)
chr2 (1-49)||(34369372-34369420)
chr2 (7-50)||(24086305-24086348)
chr2 (6-49)||(32087102-32087145)
[»] scaffold0555 (1 HSPs)
scaffold0555 (1-50)||(6502-6551)
[»] scaffold0019 (2 HSPs)
scaffold0019 (1-49)||(24851-24899)
scaffold0019 (1-45)||(35227-35271)
[»] scaffold0386 (1 HSPs)
scaffold0386 (5-47)||(4874-4916)
[»] scaffold0032 (1 HSPs)
scaffold0032 (1-50)||(92827-92876)
[»] scaffold0014 (1 HSPs)
scaffold0014 (1-50)||(192171-192220)
[»] scaffold0258 (1 HSPs)
scaffold0258 (9-49)||(20252-20292)
[»] scaffold0113 (1 HSPs)
scaffold0113 (1-49)||(6685-6733)
[»] scaffold0115 (1 HSPs)
scaffold0115 (1-50)||(36130-36179)
[»] scaffold0005 (1 HSPs)
scaffold0005 (1-50)||(243830-243878)
[»] scaffold0637 (1 HSPs)
scaffold0637 (1-49)||(7435-7483)
[»] scaffold0871 (1 HSPs)
scaffold0871 (1-48)||(4007-4054)


Alignment Details
Target: chr1 (Bit Score: 80; Significance: 5e-38; HSPs: 35)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 80; E-Value: 5e-38
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 26652623 - 26652710
Alignment:
Q  1 aaaatgactgaaaaacatgctaagaataacgtaggatgacatgtcatcaattaatgtataagatatgctaagacttgcatgttttttt 88  Q
    ||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26652623 aaaataactgaaaaacatgctaaaaataacgtaggatgacatgtcatcaattaatgtataagatatgctaagacttgcatgttttttt 26652710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 45; E-Value: 4e-17
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 21663138 - 21663086
Alignment:
Q  1 aaaatgactgaaaaacatgctaagaataacgtaggatgacatgtcatcaatta 53  Q
    ||||||||||||||||||||||||||||||||| |||||| ||||||||||||    
T  21663138 aaaatgactgaaaaacatgctaagaataacgtaagatgacctgtcatcaatta 21663086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 44; E-Value: 1e-16
Query Start/End: Original strand, 2 - 49
Target Start/End: Original strand, 24464664 - 24464711
Alignment:
Q  2 aaatgactgaaaaacatgctaagaataacgtaggatgacatgtcatca 49  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||    
T  24464664 aaatgactgaaaaacatgctaagaataacgtaagatgacatgtcatca 24464711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 41; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 15542356 - 15542308
Alignment:
Q  1 aaaatgactgaaaaacatgctaagaataacgtaggatgacatgtcatca 49  Q
    ||||||||||||||||||| ||||||||||||| |||||||||||||||    
T  15542356 aaaatgactgaaaaacatgttaagaataacgtaagatgacatgtcatca 15542308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 41; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 27912113 - 27912161
Alignment:
Q  1 aaaatgactgaaaaacatgctaagaataacgtaggatgacatgtcatca 49  Q
    ||||||||||||||||||| ||||||||||||| |||||||||||||||    
T  27912113 aaaatgactgaaaaacatgttaagaataacgtaagatgacatgtcatca 27912161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 38; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 7221565 - 7221614
Alignment:
Q  1 aaaatgactgaaaaacatgctaagaataacgtaggatgacatgtcatcaa 50  Q
    ||||||||||||||||||| ||||||||||||| |||||||||| |||||    
T  7221565 aaaatgactgaaaaacatgttaagaataacgtaagatgacatgttatcaa 7221614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 38; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 14235332 - 14235283
Alignment:
Q  1 aaaatgactgaaaaacatgctaagaataacgtaggatgacatgtcatcaa 50  Q
    ||||||||||||||||||||||||| ||||||| ||||||||| ||||||    
T  14235332 aaaatgactgaaaaacatgctaagagtaacgtaagatgacatgccatcaa 14235283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 37; E-Value: 0.000000000002
Query Start/End: Original strand, 7 - 51
Target Start/End: Complemental strand, 15526848 - 15526804
Alignment:
Q  7 actgaaaaacatgctaagaataacgtaggatgacatgtcatcaat 51  Q
    ||||||||||||| ||||||||||||| |||||||||||||||||    
T  15526848 actgaaaaacatgataagaataacgtaagatgacatgtcatcaat 15526804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 37; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 28009795 - 28009839
Alignment:
Q  1 aaaatgactgaaaaacatgctaagaataacgtaggatgacatgtc 45  Q
    ||||||||||||||||||||||||||||| ||| |||||||||||    
T  28009795 aaaatgactgaaaaacatgctaagaataatgtaagatgacatgtc 28009839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 37; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 53
Target Start/End: Original strand, 33192405 - 33192453
Alignment:
Q  5 tgactgaaaaacatgctaagaataacgtaggatgacatgtcatcaatta 53  Q
    |||||||||||||||||||||||| |||| |||||| ||||||||||||    
T  33192405 tgactgaaaaacatgctaagaatagcgtaagatgacttgtcatcaatta 33192453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.00000000003
Query Start/End: Original strand, 9 - 51
Target Start/End: Original strand, 14782587 - 14782629
Alignment:
Q  9 tgaaaaacatgctaagaataacgtaggatgacatgtcatcaat 51  Q
    ||||||||||||||||||||||||| |||||| ||||||||||    
T  14782587 tgaaaaacatgctaagaataacgtaagatgacctgtcatcaat 14782629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.00000000003
Query Start/End: Original strand, 7 - 53
Target Start/End: Complemental strand, 22426557 - 22426511
Alignment:
Q  7 actgaaaaacatgctaagaataacgtaggatgacatgtcatcaatta 53  Q
    ||||||||||||||||||||| ||||| |||||| ||||||||||||    
T  22426557 actgaaaaacatgctaagaatgacgtaagatgacctgtcatcaatta 22426511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 22621842 - 22621892
Alignment:
Q  1 aaaatgactgaaaaacatgctaagaataacgtaggatgacatgtcatcaat 51  Q
    ||||||||||||||||||||||||||| ||||| ||| || ||||||||||    
T  22621842 aaaatgactgaaaaacatgctaagaattacgtaagataacctgtcatcaat 22621892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.0000000001
Query Start/End: Original strand, 9 - 50
Target Start/End: Complemental strand, 26611371 - 26611330
Alignment:
Q  9 tgaaaaacatgctaagaataacgtaggatgacatgtcatcaa 50  Q
    ||||||||||||||||||||||||| |||||| |||||||||    
T  26611371 tgaaaaacatgctaagaataacgtaagatgacctgtcatcaa 26611330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 27973352 - 27973401
Alignment:
Q  1 aaaatgactgaaaaacatgctaagaataacgtaggatgacatgtcatcaa 50  Q
    ||||||||||||||||||||||||||||||||| ||| ||  ||||||||    
T  27973352 aaaatgactgaaaaacatgctaagaataacgtaagataactggtcatcaa 27973401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 729185 - 729233
Alignment:
Q  1 aaaatgactgaaaaacatgctaagaataacgtaggatgacatgtcatca 49  Q
    |||||||||||||| |||||||||||||||||| |||||| | ||||||    
T  729185 aaaatgactgaaaagcatgctaagaataacgtaagatgacctttcatca 729233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 18527544 - 18527496
Alignment:
Q  1 aaaatgactgaaaaacatgctaagaataacgtaggatgacatgtcatca 49  Q
    ||||||| ||||||| ||||||||||||||||| |||||| ||||||||    
T  18527544 aaaatgagtgaaaaagatgctaagaataacgtaagatgacttgtcatca 18527496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 26647405 - 26647357
Alignment:
Q  1 aaaatgactgaaaaacatgctaagaataacgtaggatgacatgtcatca 49  Q
    |||| |||||||||| ||||||||||||||||| |||||| ||||||||    
T  26647405 aaaaagactgaaaaatatgctaagaataacgtaagatgacctgtcatca 26647357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.000000002
Query Start/End: Original strand, 11 - 50
Target Start/End: Original strand, 22624675 - 22624714
Alignment:
Q  11 aaaaacatgctaagaataacgtaggatgacatgtcatcaa 50  Q
    ||||||||||||||||||| ||| ||||||||||||||||    
T  22624675 aaaaacatgctaagaataatgtaagatgacatgtcatcaa 22624714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.000000009
Query Start/End: Original strand, 7 - 49
Target Start/End: Complemental strand, 16817150 - 16817108
Alignment:
Q  7 actgaaaaacatgctaagaataacgtaggatgacatgtcatca 49  Q
    ||||||||||||| ||||||||||||| |||||| ||||||||    
T  16817150 actgaaaaacatgttaagaataacgtaagatgacttgtcatca 16817108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.000000009
Query Start/End: Original strand, 7 - 49
Target Start/End: Complemental strand, 18734627 - 18734585
Alignment:
Q  7 actgaaaaacatgctaagaataacgtaggatgacatgtcatca 49  Q
    ||||||||||||||||||||||||||| ||| || ||||||||    
T  18734627 actgaaaaacatgctaagaataacgtaagataacctgtcatca 18734585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.000000009
Query Start/End: Original strand, 11 - 49
Target Start/End: Complemental strand, 22507419 - 22507381
Alignment:
Q  11 aaaaacatgctaagaataacgtaggatgacatgtcatca 49  Q
    ||||||||||||||||||||||| ||| |||||||||||    
T  22507419 aaaaacatgctaagaataacgtaagatcacatgtcatca 22507381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.000000009
Query Start/End: Original strand, 7 - 49
Target Start/End: Original strand, 22665841 - 22665883
Alignment:
Q  7 actgaaaaacatgctaagaataacgtaggatgacatgtcatca 49  Q
    ||||||||||||||||||||||||| | |||| ||||||||||    
T  22665841 actgaaaaacatgctaagaataacggaagatgtcatgtcatca 22665883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.000000009
Query Start/End: Original strand, 7 - 49
Target Start/End: Complemental strand, 25402477 - 25402435
Alignment:
Q  7 actgaaaaacatgctaagaataacgtaggatgacatgtcatca 49  Q
    ||||||||||||||||||||||||| | |||||| ||||||||    
T  25402477 actgaaaaacatgctaagaataacgcaagatgacctgtcatca 25402435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 15630981 - 15630932
Alignment:
Q  1 aaaatgactgaaaaacatgctaagaataacgtaggatgacatgtcatcaa 50  Q
    ||||||||| |||||||||||||||||||| || ||| || |||||||||    
T  15630981 aaaatgactaaaaaacatgctaagaataacataagataacctgtcatcaa 15630932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 11845269 - 11845221
Alignment:
Q  1 aaaatgactgaaaaacatgctaagaataacgtaggatgacatgtcatca 49  Q
    ||||| ||||||||| ||||||||||||||||| |||||  ||||||||    
T  11845269 aaaataactgaaaaatatgctaagaataacgtaagatgatctgtcatca 11845221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 49
Target Start/End: Original strand, 12210318 - 12210362
Alignment:
Q  5 tgactgaaaaacatgctaagaataacgtaggatgacatgtcatca 49  Q
    ||||||||||||||||||||||||| ||| |||||| | ||||||    
T  12210318 tgactgaaaaacatgctaagaataatgtaagatgacctatcatca 12210362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 15158836 - 15158804
Alignment:
Q  1 aaaatgactgaaaaacatgctaagaataacgta 33  Q
    ||||| |||||||||||||||||||||||||||    
T  15158836 aaaataactgaaaaacatgctaagaataacgta 15158804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 16114849 - 16114881
Alignment:
Q  1 aaaatgactgaaaaacatgctaagaataacgta 33  Q
    ||||||| |||||||||||||||||||||||||    
T  16114849 aaaatgattgaaaaacatgctaagaataacgta 16114881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 17016862 - 17016814
Alignment:
Q  1 aaaatgactgaaaaacatgctaagaataacgtaggatgacatgtcatca 49  Q
    ||||| ||||||||| ||||||||||||||||  |||||||||| ||||    
T  17016862 aaaataactgaaaaatatgctaagaataacgtgagatgacatgttatca 17016814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 18827445 - 18827493
Alignment:
Q  1 aaaatgactgaaaaacatgctaagaataacgtaggatgacatgtcatca 49  Q
    ||||| ||||||||||||| ||||||||||||| ||||||  |||||||    
T  18827445 aaaataactgaaaaacatgttaagaataacgtaagatgaccagtcatca 18827493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 47
Target Start/End: Original strand, 26022440 - 26022480
Alignment:
Q  7 actgaaaaacatgctaagaataacgtaggatgacatgtcat 47  Q
    ||||||||||||||||||||||||||| ||| || ||||||    
T  26022440 actgaaaaacatgctaagaataacgtaagatcacctgtcat 26022480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 27116271 - 27116223
Alignment:
Q  1 aaaatgactgaaaaacatgctaagaataacgtaggatgacatgtcatca 49  Q
    ||||||| ||||||||||| |||||| |||||| |||||||| ||||||    
T  27116271 aaaatgattgaaaaacatgttaagaaaaacgtaagatgacatttcatca 27116223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 44797167 - 44797215
Alignment:
Q  1 aaaatgactgaaaaacatgctaagaataacgtaggatgacatgtcatca 49  Q
    |||| |||||||||||||||||||||||| ||| |||||  ||||||||    
T  44797167 aaaaagactgaaaaacatgctaagaataatgtaagatgatctgtcatca 44797215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 28; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 21536954 - 21536915
Alignment:
Q  1 aaaatgactgaaaaacatgctaagaataacgtaggatgac 40  Q
    ||||||||||||||| ||||||| ||||||||| ||||||    
T  21536954 aaaatgactgaaaaatatgctaaaaataacgtaagatgac 21536915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 47; Significance: 2e-18; HSPs: 30)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 47; E-Value: 2e-18
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 22470450 - 22470400
Alignment:
Q  1 aaaatgactgaaaaacatgctaagaataacgtaggatgacatgtcatcaat 51  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  22470450 aaaatgactgaaaaacatgctaagaataacgtaagatgacatgtcatcaat 22470400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 39; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 8765723 - 8765761
Alignment:
Q  1 aaaatgactgaaaaacatgctaagaataacgtaggatga 39  Q
    |||||||||||||||||||||||||||||||||||||||    
T  8765723 aaaatgactgaaaaacatgctaagaataacgtaggatga 8765761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 39; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 8770613 - 8770651
Alignment:
Q  1 aaaatgactgaaaaacatgctaagaataacgtaggatga 39  Q
    |||||||||||||||||||||||||||||||||||||||    
T  8770613 aaaatgactgaaaaacatgctaagaataacgtaggatga 8770651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 38; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 2508767 - 2508718
Alignment:
Q  1 aaaatgactgaaaaacatgctaagaataacgtaggatgacatgtcatcaa 50  Q
    |||||||||||||||||| |||||||||||||| ||||||||| ||||||    
T  2508767 aaaatgactgaaaaacatactaagaataacgtaagatgacatgccatcaa 2508718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 38; E-Value: 0.0000000000006
Query Start/End: Original strand, 5 - 50
Target Start/End: Original strand, 18535823 - 18535868
Alignment:
Q  5 tgactgaaaaacatgctaagaataacgtaggatgacatgtcatcaa 50  Q
    ||||||||||||||||||||||||||||| |||||| |||||||||    
T  18535823 tgactgaaaaacatgctaagaataacgtaagatgacttgtcatcaa 18535868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 38; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 19912629 - 19912678
Alignment:
Q  1 aaaatgactgaaaaacatgctaagaataacgtaggatgacatgtcatcaa 50  Q
    ||||||||||||||| ||||||||||||||||| |||||| |||||||||    
T  19912629 aaaatgactgaaaaatatgctaagaataacgtaagatgacctgtcatcaa 19912678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 37; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 7805791 - 7805839
Alignment:
Q  1 aaaatgactgaaaaacatgctaagaataacgtaggatgacatgtcatca 49  Q
    ||||||| ||||||||||||||||||||||||| |||||| ||||||||    
T  7805791 aaaatgattgaaaaacatgctaagaataacgtaagatgacctgtcatca 7805839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 37; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 12517339 - 12517387
Alignment:
Q  1 aaaatgactgaaaaacatgctaagaataacgtaggatgacatgtcatca 49  Q
    ||||||||||||||| ||||||||||||||||| |||||| ||||||||    
T  12517339 aaaatgactgaaaaagatgctaagaataacgtaagatgacctgtcatca 12517387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 36; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 12771250 - 12771211
Alignment:
Q  1 aaaatgactgaaaaacatgctaagaataacgtaggatgac 40  Q
    ||||||||||||||||||||||||||||||||| ||||||    
T  12771250 aaaatgactgaaaaacatgctaagaataacgtaagatgac 12771211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 16242242 - 16242192
Alignment:
Q  1 aaaatgactgaaaaacatgctaagaataacgtaggatgacatgtcatcaat 51  Q
    ||||||| ||||||| ||||||||||||||||| |||||| ||||||||||    
T  16242242 aaaatgagtgaaaaatatgctaagaataacgtaagatgacctgtcatcaat 16242192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.00000000003
Query Start/End: Original strand, 7 - 49
Target Start/End: Complemental strand, 20021859 - 20021817
Alignment:
Q  7 actgaaaaacatgctaagaataacgtaggatgacatgtcatca 49  Q
    ||||||||||||||||||| ||||||| |||||||||||||||    
T  20021859 actgaaaaacatgctaagagtaacgtaagatgacatgtcatca 20021817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.0000000001
Query Start/End: Original strand, 9 - 50
Target Start/End: Original strand, 20886925 - 20886966
Alignment:
Q  9 tgaaaaacatgctaagaataacgtaggatgacatgtcatcaa 50  Q
    ||||||||||||||||||||||||| |||||| |||||||||    
T  20886925 tgaaaaacatgctaagaataacgtaagatgacctgtcatcaa 20886966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 22247046 - 22247090
Alignment:
Q  1 aaaatgactgaaaaacatgctaagaataacgtaggatgacatgtca 46  Q
    ||||||||||||||| ||||||||||||||||| ||||||||||||    
T  22247046 aaaatgactgaaaaa-atgctaagaataacgtaagatgacatgtca 22247090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 25530779 - 25530734
Alignment:
Q  1 aaaatgactgaaaaacatgctaagaataacgtaggatgacatgtca 46  Q
    ||||||||||||||| ||||||||||||||||| ||| ||||||||    
T  25530779 aaaatgactgaaaaatatgctaagaataacgtaagataacatgtca 25530734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.0000000005
Query Start/End: Original strand, 5 - 49
Target Start/End: Complemental strand, 819890 - 819846
Alignment:
Q  5 tgactgaaaaacatgctaagaataacgtaggatgacatgtcatca 49  Q
    ||||||||||||||||||||||||||||| |||||| | ||||||    
T  819890 tgactgaaaaacatgctaagaataacgtaagatgacctatcatca 819846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.0000000005
Query Start/End: Original strand, 7 - 51
Target Start/End: Complemental strand, 16228386 - 16228342
Alignment:
Q  7 actgaaaaacatgctaagaataacgtaggatgacatgtcatcaat 51  Q
    |||||||| |||||||||||||||||| |||||| ||||||||||    
T  16228386 actgaaaagcatgctaagaataacgtaagatgacctgtcatcaat 16228342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.0000000005
Query Start/End: Original strand, 7 - 51
Target Start/End: Original strand, 24516595 - 24516639
Alignment:
Q  7 actgaaaaacatgctaagaataacgtaggatgacatgtcatcaat 51  Q
    |||||||||||||||||||||||| || | |||||||||||||||    
T  24516595 actgaaaaacatgctaagaataacataaggtgacatgtcatcaat 24516639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 34276485 - 34276437
Alignment:
Q  1 aaaatgactgaaaaacatgctaagaataacgtaggatgacatgtcatca 49  Q
    ||||||||||||||| |||||||||||||||||  ||||| ||||||||    
T  34276485 aaaatgactgaaaaatatgctaagaataacgtaaaatgacctgtcatca 34276437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 52935581 - 52935533
Alignment:
Q  1 aaaatgactgaaaaacatgctaagaataacgtaggatgacatgtcatca 49  Q
    ||||||| ||||||||||||||||||||||||| |||||| | ||||||    
T  52935581 aaaatgattgaaaaacatgctaagaataacgtaagatgacctatcatca 52935533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.000000002
Query Start/End: Original strand, 9 - 48
Target Start/End: Complemental strand, 3429264 - 3429225
Alignment:
Q  9 tgaaaaacatgctaagaataacgtaggatgacatgtcatc 48  Q
    ||||||||||| ||||||||||||| ||||||||||||||    
T  3429264 tgaaaaacatgataagaataacgtaagatgacatgtcatc 3429225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.000000009
Query Start/End: Original strand, 7 - 49
Target Start/End: Complemental strand, 27412700 - 27412658
Alignment:
Q  7 actgaaaaacatgctaagaataacgtaggatgacatgtcatca 49  Q
    ||||||||||||||||| ||||||||| |||||| ||||||||    
T  27412700 actgaaaaacatgctaaaaataacgtaagatgacttgtcatca 27412658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 1096808 - 1096761
Alignment:
Q  1 aaaatgactgaaaaacatgctaagaataacgtaggatgacatgtcatca 49  Q
    ||||||||| |||||||||| |||||||||||| |||||| ||||||||    
T  1096808 aaaatgact-aaaaacatgcaaagaataacgtaagatgacctgtcatca 1096761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 51
Target Start/End: Original strand, 19533827 - 19533871
Alignment:
Q  7 actgaaaaacatgctaagaataacgtaggatgacatgtcatcaat 51  Q
    ||||||||| ||||||||||||||||| |||||  ||||||||||    
T  19533827 actgaaaaatatgctaagaataacgtaagatgatctgtcatcaat 19533871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 20891693 - 20891645
Alignment:
Q  1 aaaatgactgaaaaacatgctaagaataacgtaggatgacatgtcatca 49  Q
    |||| |||||||||| ||||||||||||||||| |||||| || |||||    
T  20891693 aaaacgactgaaaaatatgctaagaataacgtaagatgacctgccatca 20891645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 25850996 - 25850952
Alignment:
Q  1 aaaatgactgaaaaacatgctaagaataacgtaggatgacatgtc 45  Q
    ||||| |||||||||||||||||||||||| || |||||| ||||    
T  25850996 aaaataactgaaaaacatgctaagaataacataagatgacctgtc 25850952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 49
Target Start/End: Original strand, 26092962 - 26093002
Alignment:
Q  9 tgaaaaacatgctaagaataacgtaggatgacatgtcatca 49  Q
    ||||||| ||||||||||||| ||| |||||||||||||||    
T  26092962 tgaaaaatatgctaagaataatgtaagatgacatgtcatca 26093002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 27852651 - 27852603
Alignment:
Q  1 aaaatgactgaaaaacatgctaagaataacgtaggatgacatgtcatca 49  Q
    ||||||||| ||| ||||||||| ||||||||| || ||||||||||||    
T  27852651 aaaatgactaaaagacatgctaaaaataacgtaagacgacatgtcatca 27852603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 31283951 - 31283903
Alignment:
Q  1 aaaatgactgaaaaacatgctaagaataacgtaggatgacatgtcatca 49  Q
    ||||||| ||||||||||| ||||||||||||  |||||| ||||||||    
T  31283951 aaaatgattgaaaaacatgataagaataacgttagatgacctgtcatca 31283903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 51118529 - 51118481
Alignment:
Q  1 aaaatgactgaaaaac-atgctaagaataacgtaggatgacatgtcatc 48  Q
    |||||||||||||||  ||||||| ||||||||| ||||||||||||||    
T  51118529 aaaatgactgaaaaaatatgctaaaaataacgtaagatgacatgtcatc 51118481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 28; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 22450498 - 22450537
Alignment:
Q  1 aaaatgactgaaaaacatgctaagaataacgtaggatgac 40  Q
    |||| ||||||||| |||||||||||||||||| ||||||    
T  22450498 aaaacgactgaaaagcatgctaagaataacgtaagatgac 22450537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 45; Significance: 4e-17; HSPs: 42)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 45; E-Value: 4e-17
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 10332453 - 10332501
Alignment:
Q  1 aaaatgactgaaaaacatgctaagaataacgtaggatgacatgtcatca 49  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||    
T  10332453 aaaatgactgaaaaacatgctaagaataacgtaagatgacatgtcatca 10332501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 44; E-Value: 1e-16
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 1810953 - 1811004
Alignment:
Q  1 aaaatgactgaaaaacatgctaagaataacgtaggatgacatgtcatcaatt 52  Q
    |||||||||||||||||||||| |||||||||| ||||||||||||||||||    
T  1810953 aaaatgactgaaaaacatgctacgaataacgtaagatgacatgtcatcaatt 1811004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 42; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 17887778 - 17887729
Alignment:
Q  1 aaaatgactgaaaaacatgctaagaataacgtaggatgacatgtcatcaa 50  Q
    ||||||||||||||| |||||||||||||||||||||||| |||||||||    
T  17887778 aaaatgactgaaaaatatgctaagaataacgtaggatgacctgtcatcaa 17887729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 42; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 23173733 - 23173684
Alignment:
Q  1 aaaatgactgaaaaacatgctaagaataacgtaggatgacatgtcatcaa 50  Q
    ||||| ||||||||||||||||||||||||||| ||||||||||||||||    
T  23173733 aaaataactgaaaaacatgctaagaataacgtaagatgacatgtcatcaa 23173684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 38; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 26249123 - 26249074
Alignment:
Q  1 aaaatgactgaaaaacatgctaagaataacgtaggatgacatgtcatcaa 50  Q
    |||||||||||||||||||||| |||||||||| |||||| |||||||||    
T  26249123 aaaatgactgaaaaacatgctatgaataacgtaagatgacctgtcatcaa 26249074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 37; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 2565955 - 2566003
Alignment:
Q  1 aaaatgactgaaaaacatgctaagaataacgtaggatgacatgtcatca 49  Q
    |||||||||||||||||||||||||||| |||| |||||| ||||||||    
T  2565955 aaaatgactgaaaaacatgctaagaatatcgtaagatgacttgtcatca 2566003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 37; E-Value: 0.000000000002
Query Start/End: Original strand, 9 - 49
Target Start/End: Original strand, 13280816 - 13280856
Alignment:
Q  9 tgaaaaacatgctaagaataacgtaggatgacatgtcatca 49  Q
    ||||||||||||||||||||||||| |||||||||||||||    
T  13280816 tgaaaaacatgctaagaataacgtaagatgacatgtcatca 13280856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 37; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 49
Target Start/End: Complemental strand, 18986788 - 18986744
Alignment:
Q  5 tgactgaaaaacatgctaagaataacgtaggatgacatgtcatca 49  Q
    ||||||||||||||||||||||||||||| ||||| |||||||||    
T  18986788 tgactgaaaaacatgctaagaataacgtaagatgatatgtcatca 18986744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 37; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 49
Target Start/End: Complemental strand, 19001416 - 19001372
Alignment:
Q  5 tgactgaaaaacatgctaagaataacgtaggatgacatgtcatca 49  Q
    ||||||||||||||||||||||||||||| ||||| |||||||||    
T  19001416 tgactgaaaaacatgctaagaataacgtaagatgatatgtcatca 19001372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 37; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 53
Target Start/End: Original strand, 23897293 - 23897341
Alignment:
Q  5 tgactgaaaaacatgctaagaataacgtaggatgacatgtcatcaatta 53  Q
    ||||||||||||||| ||||||||| ||| |||||||||||||||||||    
T  23897293 tgactgaaaaacatgttaagaataatgtaagatgacatgtcatcaatta 23897341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 37; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 39270320 - 39270273
Alignment:
Q  1 aaaatgactgaaaaacatgctaagaataacgtaggatgacatgtcatca 49  Q
    |||||||||||||||||||||||| |||||||| |||||||||||||||    
T  39270320 aaaatgactgaaaaacatgctaag-ataacgtaagatgacatgtcatca 39270273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 2505892 - 2505938
Alignment:
Q  1 aaaatgactgaaaaacatgctaagaataacgtaggatgacatgtcat 47  Q
    ||||||||||||||| ||||||||||||||||| ||||| |||||||    
T  2505892 aaaatgactgaaaaatatgctaagaataacgtaagatgaaatgtcat 2505938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 35; E-Value: 0.00000000003
Query Start/End: Original strand, 7 - 49
Target Start/End: Original strand, 2927929 - 2927971
Alignment:
Q  7 actgaaaaacatgctaagaataacgtaggatgacatgtcatca 49  Q
    ||||||||||||||||||||||||||| |||||| ||||||||    
T  2927929 actgaaaaacatgctaagaataacgtaagatgacctgtcatca 2927971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 3173759 - 3173809
Alignment:
Q  1 aaaatgactgaaaaacatgctaagaataacgtaggatgacatgtcatcaat 51  Q
    ||||||||||||||||||||||||||||||| | |||||  ||||||||||    
T  3173759 aaaatgactgaaaaacatgctaagaataacgcaagatgatctgtcatcaat 3173809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.00000000003
Query Start/End: Original strand, 11 - 49
Target Start/End: Complemental strand, 9078919 - 9078881
Alignment:
Q  11 aaaaacatgctaagaataacgtaggatgacatgtcatca 49  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  9078919 aaaaacatgctaagaataacgtaagatgacatgtcatca 9078881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000001
Query Start/End: Original strand, 6 - 47
Target Start/End: Original strand, 1586245 - 1586286
Alignment:
Q  6 gactgaaaaacatgctaagaataacgtaggatgacatgtcat 47  Q
    ||||| ||||||||||||||||||||||||||||||| ||||    
T  1586245 gactggaaaacatgctaagaataacgtaggatgacatatcat 1586286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 5236914 - 5236873
Alignment:
Q  1 aaaatgactgaaaaacatgctaagaataacgtaggatgacat 42  Q
    ||||| ||||||||||||||||||||||||||| ||||||||    
T  5236914 aaaataactgaaaaacatgctaagaataacgtaagatgacat 5236873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 49
Target Start/End: Original strand, 19154874 - 19154915
Alignment:
Q  8 ctgaaaaacatgctaagaataacgtaggatgacatgtcatca 49  Q
    |||||||||||||||||||||||||| |||||| ||||||||    
T  19154874 ctgaaaaacatgctaagaataacgtaagatgacctgtcatca 19154915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 49
Target Start/End: Original strand, 20754273 - 20754314
Alignment:
Q  8 ctgaaaaacatgctaagaataacgtaggatgacatgtcatca 49  Q
    |||||||||||||||||||||||||| |||||| ||||||||    
T  20754273 ctgaaaaacatgctaagaataacgtaagatgacctgtcatca 20754314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 1254743 - 1254696
Alignment:
Q  1 aaaatgactgaaaaacatgctaagaataacgtaggatgacatgtcatca 49  Q
    ||||||||||||||||||||||| ||||||||| |||||| ||||||||    
T  1254743 aaaatgactgaaaaacatgctaa-aataacgtaagatgacttgtcatca 1254696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 3585570 - 3585522
Alignment:
Q  1 aaaatgactgaaaaacatgctaagaataacgtaggatgacatgtcatca 49  Q
    ||||||| ||||||||||||||||||||| ||| |||||| ||||||||    
T  3585570 aaaatgattgaaaaacatgctaagaataatgtaagatgacttgtcatca 3585522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 4450720 - 4450768
Alignment:
Q  1 aaaatgactgaaaaacatgctaagaataacgtaggatgacatgtcatca 49  Q
    |||||||||| |||||||||||||||||||||| |||||  ||||||||    
T  4450720 aaaatgactggaaaacatgctaagaataacgtaagatgatctgtcatca 4450768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 6039345 - 6039297
Alignment:
Q  1 aaaatgactgaaaaacatgctaagaataacgtaggatgacatgtcatca 49  Q
    ||||||||||||||||||| ||||||||| ||| ||||||||| |||||    
T  6039345 aaaatgactgaaaaacatgttaagaataatgtaagatgacatgacatca 6039297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 9767834 - 9767882
Alignment:
Q  1 aaaatgactgaaaaacatgctaagaataacgtaggatgacatgtcatca 49  Q
    |||||| |||||||||||||||||||||||||  |||||| ||||||||    
T  9767834 aaaatggctgaaaaacatgctaagaataacgtgagatgacctgtcatca 9767882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 19201370 - 19201322
Alignment:
Q  1 aaaatgactgaaaaacatgctaagaataacgtaggatgacatgtcatca 49  Q
    ||||| ||||||||||||||||||||||||||| |||||  ||||||||    
T  19201370 aaaattactgaaaaacatgctaagaataacgtaagatgatctgtcatca 19201322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 49
Target Start/End: Original strand, 1767430 - 1767473
Alignment:
Q  6 gactgaaaaacatgctaagaataacgtaggatgacatgtcatca 49  Q
    |||||||||| ||||||||||||||||| |||||| ||||||||    
T  1767430 gactgaaaaatatgctaagaataacgtaagatgacctgtcatca 1767473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.000000009
Query Start/End: Original strand, 7 - 49
Target Start/End: Complemental strand, 2506862 - 2506820
Alignment:
Q  7 actgaaaaacatgctaagaataacgtaggatgacatgtcatca 49  Q
    ||||||||||||||| ||||||||||| |||||| ||||||||    
T  2506862 actgaaaaacatgctgagaataacgtaagatgacctgtcatca 2506820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 10414327 - 10414277
Alignment:
Q  1 aaaatgactgaaaaacatgctaagaataacgtaggatgacatgtcatcaat 51  Q
    ||||| || |||||||||||||||||||| ||| |||||| ||||||||||    
T  10414327 aaaataaccgaaaaacatgctaagaataatgtaagatgacctgtcatcaat 10414277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.000000009
Query Start/End: Original strand, 7 - 49
Target Start/End: Complemental strand, 13252749 - 13252707
Alignment:
Q  7 actgaaaaacatgctaagaataacgtaggatgacatgtcatca 49  Q
    ||||||||||||||||||||||||||| |||||| || |||||    
T  13252749 actgaaaaacatgctaagaataacgtaagatgacctgccatca 13252707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.000000009
Query Start/End: Original strand, 7 - 49
Target Start/End: Complemental strand, 13287752 - 13287710
Alignment:
Q  7 actgaaaaacatgctaagaataacgtaggatgacatgtcatca 49  Q
    ||||||||||||| ||||||||||||| |||||| ||||||||    
T  13287752 actgaaaaacatgttaagaataacgtaagatgacttgtcatca 13287710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.000000009
Query Start/End: Original strand, 11 - 49
Target Start/End: Complemental strand, 17189748 - 17189710
Alignment:
Q  11 aaaaacatgctaagaataacgtaggatgacatgtcatca 49  Q
    ||||||||||||||||||| ||| |||||||||||||||    
T  17189748 aaaaacatgctaagaataatgtaagatgacatgtcatca 17189710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 21707385 - 21707339
Alignment:
Q  1 aaaatgactgaaaaacatgctaagaataacgtaggatgacatgtcat 47  Q
    ||||||| ||||||| ||||||||||||||||| |||||| ||||||    
T  21707385 aaaatgattgaaaaatatgctaagaataacgtaagatgacgtgtcat 21707339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 1589289 - 1589338
Alignment:
Q  1 aaaatgactgaaaaacatgctaagaataacgtaggatgacatgtcatcaa 50  Q
    |||||| ||||||||||||||||||||| | || |||||| |||||||||    
T  1589289 aaaatggctgaaaaacatgctaagaatagcataagatgacctgtcatcaa 1589338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.00000003
Query Start/End: Original strand, 12 - 49
Target Start/End: Original strand, 7399387 - 7399424
Alignment:
Q  12 aaaacatgctaagaataacgtaggatgacatgtcatca 49  Q
    |||||||| ||||||||||||| |||||||||||||||    
T  7399387 aaaacatgttaagaataacgtaagatgacatgtcatca 7399424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 8977518 - 8977477
Alignment:
Q  1 aaaatgactgaaaaacatgctaagaataacgtaggatgacat 42  Q
    ||||||| ||||||| ||||||||||||||||| ||||||||    
T  8977518 aaaatgattgaaaaagatgctaagaataacgtaagatgacat 8977477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 30
Target Start/End: Original strand, 14195797 - 14195826
Alignment:
Q  1 aaaatgactgaaaaacatgctaagaataac 30  Q
    ||||||||||||||||||||||||||||||    
T  14195797 aaaatgactgaaaaacatgctaagaataac 14195826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 8052476 - 8052429
Alignment:
Q  1 aaaatgactgaaaaacatgctaagaataacgtaggatgacatgtcatca 49  Q
    |||||||||||||| |||||||||||||||||| |||||  ||||||||    
T  8052476 aaaatgactgaaaa-catgctaagaataacgtaagatgatttgtcatca 8052429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 9722490 - 9722538
Alignment:
Q  1 aaaatgactgaaaaacatgctaagaataacgtaggatgacatgtcatca 49  Q
    ||||||| ||||||||||||||| ||||||||| |||||  ||||||||    
T  9722490 aaaatgattgaaaaacatgctaataataacgtaagatgatttgtcatca 9722538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 10611762 - 10611810
Alignment:
Q  1 aaaatgactgaaaaacatgctaagaataacgtaggatgacatgtcatca 49  Q
    ||||| ||||| ||||||||||||||||||| | ||||| |||||||||    
T  10611762 aaaatcactgagaaacatgctaagaataacgcaagatgatatgtcatca 10611810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 11804747 - 11804795
Alignment:
Q  1 aaaatgactgaaaaacatgctaagaataacgtaggatgacatgtcatca 49  Q
    ||||||||||||||||||| || |||||||||| |||||  ||||||||    
T  11804747 aaaatgactgaaaaacatgttatgaataacgtaagatgatctgtcatca 11804795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 28; E-Value: 0.0000005
Query Start/End: Original strand, 6 - 49
Target Start/End: Original strand, 6018412 - 6018455
Alignment:
Q  6 gactgaaaaacatgctaagaataacgtaggatgacatgtcatca 49  Q
    |||||||||||||||||| |||||| || |||||||| ||||||    
T  6018412 gactgaaaaacatgctaaaaataacataagatgacatatcatca 6018455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 28; E-Value: 0.0000005
Query Start/End: Original strand, 18 - 49
Target Start/End: Original strand, 20577557 - 20577588
Alignment:
Q  18 tgctaagaataacgtaggatgacatgtcatca 49  Q
    |||||||||||||||| |||||||||||||||    
T  20577557 tgctaagaataacgtaagatgacatgtcatca 20577588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 44; Significance: 1e-16; HSPs: 25)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 44; E-Value: 1e-16
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 8968119 - 8968072
Alignment:
Q  1 aaaatgactgaaaaacatgctaagaataacgtaggatgacatgtcatc 48  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||    
T  8968119 aaaatgactgaaaaacatgctaagaataacgtaagatgacatgtcatc 8968072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 41; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 17335403 - 17335355
Alignment:
Q  1 aaaatgactgaaaaacatgctaagaataacgtaggatgacatgtcatca 49  Q
    |||||||||||||||||||| |||||||||||| |||||||||||||||    
T  17335403 aaaatgactgaaaaacatgccaagaataacgtaagatgacatgtcatca 17335355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 41; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 25025155 - 25025203
Alignment:
Q  1 aaaatgactgaaaaacatgctaagaataacgtaggatgacatgtcatca 49  Q
    ||||||||||||||||||||||||||||||||| |||||| ||||||||    
T  25025155 aaaatgactgaaaaacatgctaagaataacgtaagatgacctgtcatca 25025203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 40; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 8928361 - 8928310
Alignment:
Q  1 aaaatgactgaaaaacatgctaagaataacgtaggatgacatgtcatcaatt 52  Q
    ||||||||||||||| ||||||| ||||||||| ||||||||||||||||||    
T  8928361 aaaatgactgaaaaatatgctaaaaataacgtaagatgacatgtcatcaatt 8928310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 40; E-Value: 0.00000000000004
Query Start/End: Original strand, 6 - 49
Target Start/End: Original strand, 17277899 - 17277942
Alignment:
Q  6 gactgaaaaacatgctaagaataacgtaggatgacatgtcatca 49  Q
    |||||||||||||||||||||||||||| |||||||||||||||    
T  17277899 gactgaaaaacatgctaagaataacgtaagatgacatgtcatca 17277942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 39; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 12836118 - 12836072
Alignment:
Q  1 aaaatgactgaaaaacatgctaagaataacgtaggatgacatgtcat 47  Q
    ||||||||||||||||||||||||||||||||| ||||| |||||||    
T  12836118 aaaatgactgaaaaacatgctaagaataacgtaagatgaaatgtcat 12836072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 37; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 9849755 - 9849707
Alignment:
Q  1 aaaatgactgaaaaacatgctaagaataacgtaggatgacatgtcatca 49  Q
    |||||||||||||||||| |||||||||||||| |||||| ||||||||    
T  9849755 aaaatgactgaaaaacatactaagaataacgtaagatgacctgtcatca 9849707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 15166517 - 15166565
Alignment:
Q  1 aaaatgactgaaaaacatgctaagaataacgtaggatgacatgtcatca 49  Q
    ||||||||||||||||||||||||||||| ||| |||||| ||||||||    
T  15166517 aaaatgactgaaaaacatgctaagaataatgtaagatgacctgtcatca 15166565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 33; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 12616763 - 12616811
Alignment:
Q  1 aaaatgactgaaaaacatgctaagaataacgtaggatgacatgtcatca 49  Q
    |||| |||||||||||||| ||||||| ||||| |||||||||||||||    
T  12616763 aaaaagactgaaaaacatgttaagaattacgtaagatgacatgtcatca 12616811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.0000000005
Query Start/End: Original strand, 5 - 49
Target Start/End: Original strand, 17218581 - 17218625
Alignment:
Q  5 tgactgaaaaacatgctaagaataacgtaggatgacatgtcatca 49  Q
    ||||||||||||||||||||||||||||| |||||| | ||||||    
T  17218581 tgactgaaaaacatgctaagaataacgtaagatgacctatcatca 17218625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 17434483 - 17434531
Alignment:
Q  1 aaaatgactgaaaaacatgctaagaataacgtaggatgacatgtcatca 49  Q
    ||||||||| ||||||||||||| ||||||||| |||||| ||||||||    
T  17434483 aaaatgacttaaaaacatgctaaaaataacgtaagatgacctgtcatca 17434531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 19556588 - 19556541
Alignment:
Q  1 aaaatgactgaaaaacatgctaagaataacgtaggatgacatgtcatca 49  Q
    |||||||||||||| |||||||||||||||||| |||||| ||||||||    
T  19556588 aaaatgactgaaaa-catgctaagaataacgtaagatgacctgtcatca 19556541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 25096346 - 25096394
Alignment:
Q  1 aaaatgactgaaaaacatgctaagaataacgtaggatgacatgtcatca 49  Q
    ||||| |||| ||||||||||||||| |||||| |||||||||||||||    
T  25096346 aaaattactgtaaaacatgctaagaacaacgtaagatgacatgtcatca 25096394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 31; E-Value: 0.000000009
Query Start/End: Original strand, 7 - 49
Target Start/End: Complemental strand, 11252171 - 11252129
Alignment:
Q  7 actgaaaaacatgctaagaataacgtaggatgacatgtcatca 49  Q
    ||||||||||||||||| ||||||||| |||||| ||||||||    
T  11252171 actgaaaaacatgctaaaaataacgtaagatgacctgtcatca 11252129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 30; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 49
Target Start/End: Complemental strand, 1832099 - 1832054
Alignment:
Q  4 atgactgaaaaacatgctaagaataacgtaggatgacatgtcatca 49  Q
    |||||||||||||||||  |||||||| || |||||||||||||||    
T  1832099 atgactgaaaaacatgcctagaataacataagatgacatgtcatca 1832054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 30; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 14573498 - 14573546
Alignment:
Q  1 aaaatgactgaaaaacatgctaagaataacgtaggatgacatgtcatcaa 50  Q
    ||||||||| ||||| ||||||||||||||||| ||||| ||||||||||    
T  14573498 aaaatgact-aaaaatatgctaagaataacgtaagatgatatgtcatcaa 14573546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 30; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 18750873 - 18750922
Alignment:
Q  1 aaaatgactgaaaaacatgctaagaataacgtaggatgacatgtcatcaa 50  Q
    ||||| ||||||||| ||||||| ||||| ||| ||||||||||||||||    
T  18750873 aaaataactgaaaaatatgctaaaaataatgtaagatgacatgtcatcaa 18750922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 53
Target Start/End: Complemental strand, 9263394 - 9263346
Alignment:
Q  5 tgactgaaaaacatgctaagaataacgtaggatgacatgtcatcaatta 53  Q
    ||||||||||||||||||| ||||||||| ||| || | ||||||||||    
T  9263394 tgactgaaaaacatgctaaaaataacgtaagataacctatcatcaatta 9263346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 11782541 - 11782589
Alignment:
Q  1 aaaatgactgaaaaacatgctaagaataacgtaggatgacatgtcatca 49  Q
    ||||||||| ||||||||| ||||||||||||| |||||| | ||||||    
T  11782541 aaaatgactaaaaaacatgttaagaataacgtaagatgacctatcatca 11782589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 13588757 - 13588805
Alignment:
Q  1 aaaatgactgaaaaacatgctaagaataacgtaggatgacatgtcatca 49  Q
    ||||||| ||||||||||||||| ||||||||| |||||  ||||||||    
T  13588757 aaaatgattgaaaaacatgctaataataacgtaagatgatttgtcatca 13588805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 19335273 - 19335225
Alignment:
Q  1 aaaatgactgaaaaacatgctaagaataacgtaggatgacatgtcatca 49  Q
    ||||||||| ||||| ||||||||||||||||| |||||  ||||||||    
T  19335273 aaaatgactaaaaaatatgctaagaataacgtaagatgatctgtcatca 19335225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 26047193 - 26047141
Alignment:
Q  1 aaaatgactgaaaaacatgctaagaataacgtaggatgacatgtcatcaatta 53  Q
    ||||||||||||||  ||| | | ||||||||| |||||||||||||||||||    
T  26047193 aaaatgactgaaaagtatgttgaaaataacgtaagatgacatgtcatcaatta 26047141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 26052374 - 26052322
Alignment:
Q  1 aaaatgactgaaaaacatgctaagaataacgtaggatgacatgtcatcaatta 53  Q
    ||||||||||||||  ||| | | ||||||||| |||||||||||||||||||    
T  26052374 aaaatgactgaaaagtatgttgaaaataacgtaagatgacatgtcatcaatta 26052322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 28; E-Value: 0.0000005
Query Start/End: Original strand, 10 - 49
Target Start/End: Original strand, 22171806 - 22171845
Alignment:
Q  10 gaaaaacatgctaagaataacgtaggatgacatgtcatca 49  Q
    |||||||||||||||||||| ||| |||||| ||||||||    
T  22171806 gaaaaacatgctaagaataatgtaagatgacctgtcatca 22171845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 28; E-Value: 0.0000005
Query Start/End: Original strand, 3 - 54
Target Start/End: Complemental strand, 25940796 - 25940745
Alignment:
Q  3 aatgactgaaaaacatgctaagaataacgtaggatgacatgtcatcaattaa 54  Q
    |||||| ||||||||| || | ||||||||| |||||||||||||| |||||    
T  25940796 aatgaccgaaaaacattctgaaaataacgtaagatgacatgtcatcgattaa 25940745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 43; Significance: 6e-16; HSPs: 25)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 43; E-Value: 6e-16
Query Start/End: Original strand, 5 - 51
Target Start/End: Complemental strand, 21687173 - 21687127
Alignment:
Q  5 tgactgaaaaacatgctaagaataacgtaggatgacatgtcatcaat 51  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||    
T  21687173 tgactgaaaaacatgctaagaataacgtaagatgacatgtcatcaat 21687127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 36; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 22564597 - 22564558
Alignment:
Q  1 aaaatgactgaaaaacatgctaagaataacgtaggatgac 40  Q
    ||||||||||||||||||||||||||||||||| ||||||    
T  22564597 aaaatgactgaaaaacatgctaagaataacgtaagatgac 22564558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 35; E-Value: 0.00000000003
Query Start/End: Original strand, 7 - 49
Target Start/End: Original strand, 9387603 - 9387645
Alignment:
Q  7 actgaaaaacatgctaagaataacgtaggatgacatgtcatca 49  Q
    |||||||||||||||||||||||||||||||||| ||| ||||    
T  9387603 actgaaaaacatgctaagaataacgtaggatgacctgttatca 9387645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 34; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 9339026 - 9338977
Alignment:
Q  1 aaaatgactgaaaaacatgctaagaataacgtaggatgacatgtcatcaa 50  Q
    ||||||||||||||||||| ||||||| ||||| |||||||||| |||||    
T  9339026 aaaatgactgaaaaacatgttaagaatgacgtaagatgacatgttatcaa 9338977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 34; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 14076445 - 14076494
Alignment:
Q  1 aaaatgactgaaaaacatgctaagaataacgtaggatgacatgtcatcaa 50  Q
    ||||| |||||||| |||||||||||||||||| |||||| |||||||||    
T  14076445 aaaataactgaaaaccatgctaagaataacgtaagatgacctgtcatcaa 14076494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 33; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 1636682 - 1636730
Alignment:
Q  1 aaaatgactgaaaaacatgctaagaataacgtaggatgacatgtcatca 49  Q
    ||||| ||||||||||||||||||||||||||| |||||  ||||||||    
T  1636682 aaaataactgaaaaacatgctaagaataacgtaagatgatctgtcatca 1636730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 33; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 9848212 - 9848260
Alignment:
Q  1 aaaatgactgaaaaacatgctaagaataacgtaggatgacatgtcatca 49  Q
    ||||||||||||||||||| ||||||||||||   ||||||||||||||    
T  9848212 aaaatgactgaaaaacatgttaagaataacgtcaaatgacatgtcatca 9848260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 14641681 - 14641729
Alignment:
Q  1 aaaatgactgaaaaacatgctaagaataacgtaggatgacatgtcatca 49  Q
    ||||| ||||||||||||||||||||||||||| ||| || ||||||||    
T  14641681 aaaataactgaaaaacatgctaagaataacgtaagataacctgtcatca 14641729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 14727183 - 14727231
Alignment:
Q  1 aaaatgactgaaaaacatgctaagaataacgtaggatgacatgtcatca 49  Q
    ||||||||||||||||||| ||| ||||||||| |||||| ||||||||    
T  14727183 aaaatgactgaaaaacatggtaataataacgtaagatgacctgtcatca 14727231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.0000000005
Query Start/End: Original strand, 10 - 50
Target Start/End: Complemental strand, 17822062 - 17822022
Alignment:
Q  10 gaaaaacatgctaagaataacgtaggatgacatgtcatcaa 50  Q
    |||||||||||||||||||||||| ||||||||||| ||||    
T  17822062 gaaaaacatgctaagaataacgtaagatgacatgtcttcaa 17822022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.000000002
Query Start/End: Original strand, 7 - 50
Target Start/End: Complemental strand, 22404296 - 22404253
Alignment:
Q  7 actgaaaaacatgctaagaataacgtaggatgacatgtcatcaa 50  Q
    ||||||||||||| ||||||||||| | ||||||||||||||||    
T  22404296 actgaaaaacatgataagaataacgaaagatgacatgtcatcaa 22404253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 21760455 - 21760405
Alignment:
Q  1 aaaatgactgaaaaacatgctaagaataacgtaggatgacatgtcatcaat 51  Q
    ||||||||||||||| |||||||||||||| || | |||| ||||||||||    
T  21760455 aaaatgactgaaaaatatgctaagaataacttaaggtgacctgtcatcaat 21760405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 26820909 - 26820955
Alignment:
Q  1 aaaatgactgaaaaacatgctaagaataacgtaggatgacatgtcat 47  Q
    ||||| ||||||||||||||||||| ||||||| |||||| ||||||    
T  26820909 aaaataactgaaaaacatgctaagagtaacgtaagatgacctgtcat 26820955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 50
Target Start/End: Complemental strand, 8038090 - 8038049
Alignment:
Q  9 tgaaaaacatgctaagaataacgtaggatgacatgtcatcaa 50  Q
    ||||||||| ||||||||||||||| |||||| |||||||||    
T  8038090 tgaaaaacaggctaagaataacgtaagatgacctgtcatcaa 8038049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 10505195 - 10505244
Alignment:
Q  1 aaaatgactgaaaaacatgctaagaataacgtaggatgacatgtcatcaa 50  Q
    ||||||||||||||| |||||||| |||||||| ||| || |||||||||    
T  10505195 aaaatgactgaaaaatatgctaagtataacgtaagataacttgtcatcaa 10505244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.00000003
Query Start/End: Original strand, 7 - 48
Target Start/End: Complemental strand, 17379502 - 17379461
Alignment:
Q  7 actgaaaaacatgctaagaataacgtaggatgacatgtcatc 48  Q
    ||||||||||||||||||||||||||| |||||  |||||||    
T  17379502 actgaaaaacatgctaagaataacgtaagatgaattgtcatc 17379461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 27961263 - 27961304
Alignment:
Q  1 aaaatgactgaaaaacatgctaagaataacgtaggatgacat 42  Q
    ||||||| ||||||||||| ||||||||||||| ||||||||    
T  27961263 aaaatgattgaaaaacatgttaagaataacgtaagatgacat 27961304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 9897916 - 9897868
Alignment:
Q  1 aaaatgactgaaaaacatgctaagaataacgtaggatgacatgtcatca 49  Q
    ||||||||| |||| |||||||||||  ||||| |||||||||||||||    
T  9897916 aaaatgactaaaaatcatgctaagaacgacgtaagatgacatgtcatca 9897868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 17384072 - 17384120
Alignment:
Q  1 aaaatgactgaaaaacatgctaagaataacgtaggatgacatgtcatca 49  Q
    ||||| ||||||||||||||||||||||| ||| |||||  ||||||||    
T  17384072 aaaataactgaaaaacatgctaagaataatgtaagatgatctgtcatca 17384120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 24480073 - 24480121
Alignment:
Q  1 aaaatgactgaaaaacatgctaagaataacgtaggatgacatgtcatca 49  Q
    ||||||| ||||| ||||||||||||||||||| |||||| | ||||||    
T  24480073 aaaatgattgaaatacatgctaagaataacgtaagatgacctatcatca 24480121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 28; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 13216353 - 13216314
Alignment:
Q  1 aaaatgactgaaaaa-catgctaagaataacgtaggatga 39  Q
    ||||||||||||||| |||||||||||||||||| |||||    
T  13216353 aaaatgactgaaaaaacatgctaagaataacgtaagatga 13216314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 28; E-Value: 0.0000005
Query Start/End: Original strand, 7 - 50
Target Start/End: Complemental strand, 18171295 - 18171252
Alignment:
Q  7 actgaaaaacatgctaagaataacgtaggatgacatgtcatcaa 50  Q
    ||||||||||||||||||||||| | | |||||| |||||||||    
T  18171295 actgaaaaacatgctaagaataatgcaagatgacctgtcatcaa 18171252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 28; E-Value: 0.0000005
Query Start/End: Original strand, 6 - 49
Target Start/End: Original strand, 19246330 - 19246373
Alignment:
Q  6 gactgaaaaacatgctaagaataacgtaggatgacatgtcatca 49  Q
    |||||||||||||||| ||||||||||  |||||| ||||||||    
T  19246330 gactgaaaaacatgcttagaataacgttagatgacctgtcatca 19246373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 28; E-Value: 0.0000005
Query Start/End: Original strand, 9 - 48
Target Start/End: Complemental strand, 23644357 - 23644318
Alignment:
Q  9 tgaaaaacatgctaagaataacgtaggatgacatgtcatc 48  Q
    ||||||||||||||||||||||||| ||| || |||||||    
T  23644357 tgaaaaacatgctaagaataacgtaagataacctgtcatc 23644318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 28; E-Value: 0.0000005
Query Start/End: Original strand, 6 - 49
Target Start/End: Complemental strand, 31878891 - 31878848
Alignment:
Q  6 gactgaaaaacatgctaagaataacgtaggatgacatgtcatca 49  Q
    |||||||||||||||||||||||| ||| |||||| | ||||||    
T  31878891 gactgaaaaacatgctaagaataaagtaagatgacctctcatca 31878848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043 (Bit Score: 41; Significance: 0.000000000000009; HSPs: 1)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 41; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 88484 - 88436
Alignment:
Q  1 aaaatgactgaaaaacatgctaagaataacgtaggatgacatgtcatca 49  Q
    ||||||| ||||||||||||||||||||||||| |||||||||||||||    
T  88484 aaaatgattgaaaaacatgctaagaataacgtaagatgacatgtcatca 88436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 41; Significance: 0.000000000000009; HSPs: 35)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 41; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 13313319 - 13313271
Alignment:
Q  1 aaaatgactgaaaaacatgctaagaataacgtaggatgacatgtcatca 49  Q
    ||||||||||||||||||||||||||||||||| || ||||||||||||    
T  13313319 aaaatgactgaaaaacatgctaagaataacgtaagacgacatgtcatca 13313271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 41; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 19705035 - 19705083
Alignment:
Q  1 aaaatgactgaaaaacatgctaagaataacgtaggatgacatgtcatca 49  Q
    |||||||||||||||||| |||||||||||||| |||||||||||||||    
T  19705035 aaaatgactgaaaaacatactaagaataacgtaagatgacatgtcatca 19705083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 41; E-Value: 0.000000000000009
Query Start/End: Original strand, 5 - 49
Target Start/End: Complemental strand, 21695457 - 21695413
Alignment:
Q  5 tgactgaaaaacatgctaagaataacgtaggatgacatgtcatca 49  Q
    ||||||||||||||||||||||||||||| |||||||||||||||    
T  21695457 tgactgaaaaacatgctaagaataacgtaagatgacatgtcatca 21695413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 37; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 20400383 - 20400431
Alignment:
Q  1 aaaatgactgaaaaacatgctaagaataacgtaggatgacatgtcatca 49  Q
    |||||||||||||| |||||||||||||||||| |||||| ||||||||    
T  20400383 aaaatgactgaaaagcatgctaagaataacgtaagatgacctgtcatca 20400431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 35; E-Value: 0.00000000003
Query Start/End: Original strand, 7 - 49
Target Start/End: Original strand, 19265877 - 19265919
Alignment:
Q  7 actgaaaaacatgctaagaataacgtaggatgacatgtcatca 49  Q
    ||||||||||||||||||||||||||| |||||| ||||||||    
T  19265877 actgaaaaacatgctaagaataacgtaagatgacctgtcatca 19265919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 34; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 49
Target Start/End: Original strand, 6886726 - 6886767
Alignment:
Q  8 ctgaaaaacatgctaagaataacgtaggatgacatgtcatca 49  Q
    |||||||||||||||||||||||||| |||||| ||||||||    
T  6886726 ctgaaaaacatgctaagaataacgtaagatgacttgtcatca 6886767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 34; E-Value: 0.0000000001
Query Start/End: Original strand, 6 - 51
Target Start/End: Complemental strand, 12342934 - 12342889
Alignment:
Q  6 gactgaaaaacatgctaagaataacgtaggatgacatgtcatcaat 51  Q
    |||||||||||| | ||||||||||||| |||||||||||||||||    
T  12342934 gactgaaaaacaagttaagaataacgtaagatgacatgtcatcaat 12342889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 17650010 - 17650059
Alignment:
Q  1 aaaatgactgaaaaacatgctaagaataacgtaggatgacatgtcatcaa 50  Q
    |||| |||||||||||||| ||||||||||||| |||||| |||||||||    
T  17650010 aaaacgactgaaaaacatgttaagaataacgtaagatgacttgtcatcaa 17650059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 34; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 28621653 - 28621702
Alignment:
Q  1 aaaatgactgaaaaacatgctaagaataacgtaggatgacatgtcatcaa 50  Q
    ||||| ||||||||||||||||||||||||||  |||||| |||||||||    
T  28621653 aaaataactgaaaaacatgctaagaataacgttagatgacctgtcatcaa 28621702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 5151968 - 5152016
Alignment:
Q  1 aaaatgactgaaaaacatgctaagaataacgtaggatgacatgtcatca 49  Q
    ||||| ||||||||||||| ||||||||||||| |||||| ||||||||    
T  5151968 aaaattactgaaaaacatgttaagaataacgtaagatgacttgtcatca 5152016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 13833651 - 13833603
Alignment:
Q  1 aaaatgactgaaaaacatgctaagaataacgtaggatgacatgtcatca 49  Q
    |||||||||||||||||||| |||||||||||| ||| || ||||||||    
T  13833651 aaaatgactgaaaaacatgcaaagaataacgtaagattacttgtcatca 13833603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.0000000005
Query Start/End: Original strand, 9 - 49
Target Start/End: Original strand, 14271898 - 14271938
Alignment:
Q  9 tgaaaaacatgctaagaataacgtaggatgacatgtcatca 49  Q
    ||||||||||||||||||||||||| |||||| ||||||||    
T  14271898 tgaaaaacatgctaagaataacgtaagatgacctgtcatca 14271938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.0000000005
Query Start/End: Original strand, 9 - 49
Target Start/End: Original strand, 21316840 - 21316880
Alignment:
Q  9 tgaaaaacatgctaagaataacgtaggatgacatgtcatca 49  Q
    ||||||||||||||||||||||||| |||||| ||||||||    
T  21316840 tgaaaaacatgctaagaataacgtaagatgacctgtcatca 21316880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.0000000005
Query Start/End: Original strand, 9 - 49
Target Start/End: Complemental strand, 24380393 - 24380353
Alignment:
Q  9 tgaaaaacatgctaagaataacgtaggatgacatgtcatca 49  Q
    ||||||||||||||||||||||||| |||||||||| ||||    
T  24380393 tgaaaaacatgctaagaataacgtaagatgacatgttatca 24380353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.0000000005
Query Start/End: Original strand, 7 - 47
Target Start/End: Complemental strand, 26829508 - 26829468
Alignment:
Q  7 actgaaaaacatgctaagaataacgtaggatgacatgtcat 47  Q
    ||||||||||||||||||||||||||| |||||| ||||||    
T  26829508 actgaaaaacatgctaagaataacgtaagatgacgtgtcat 26829468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 49
Target Start/End: Complemental strand, 25180764 - 25180721
Alignment:
Q  6 gactgaaaaacatgctaagaataacgtaggatgacatgtcatca 49  Q
    |||||||||||||| |||| |||||||| |||||||||||||||    
T  25180764 gactgaaaaacatgttaaggataacgtaagatgacatgtcatca 25180721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.000000002
Query Start/End: Original strand, 9 - 52
Target Start/End: Original strand, 26139845 - 26139888
Alignment:
Q  9 tgaaaaacatgctaagaataacgtaggatgacatgtcatcaatt 52  Q
    ||||||||||||||||||||||||| |||||| | |||||||||    
T  26139845 tgaaaaacatgctaagaataacgtaagatgacctttcatcaatt 26139888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 47
Target Start/End: Original strand, 28318558 - 28318601
Alignment:
Q  4 atgactgaaaaacatgctaagaataacgtaggatgacatgtcat 47  Q
    |||||||||||| ||||||||||||||||| ||||| |||||||    
T  28318558 atgactgaaaaatatgctaagaataacgtaagatgatatgtcat 28318601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 4007199 - 4007149
Alignment:
Q  1 aaaatgactgaaaaacatgctaagaataacgtaggatgacatgtcatcaat 51  Q
    ||||||||||||||||||||||| | |||| || |||||| ||||||||||    
T  4007199 aaaatgactgaaaaacatgctaatattaacataagatgacctgtcatcaat 4007149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 24583219 - 24583173
Alignment:
Q  1 aaaatgactgaaaaacatgctaagaataacgtaggatgacatgtcat 47  Q
    |||||||||||||||||||||||||||||| ||  ||||| ||||||    
T  24583219 aaaatgactgaaaaacatgctaagaataacataaaatgacctgtcat 24583173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.000000009
Query Start/End: Original strand, 7 - 49
Target Start/End: Complemental strand, 28275366 - 28275324
Alignment:
Q  7 actgaaaaacatgctaagaataacgtaggatgacatgtcatca 49  Q
    ||||||||||||||||||||||||||| |||||  ||||||||    
T  28275366 actgaaaaacatgctaagaataacgtaagatgatttgtcatca 28275324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.000000009
Query Start/End: Original strand, 11 - 49
Target Start/End: Complemental strand, 29380998 - 29380960
Alignment:
Q  11 aaaaacatgctaagaataacgtaggatgacatgtcatca 49  Q
    ||||||||||||||||||||||| |||||| ||||||||    
T  29380998 aaaaacatgctaagaataacgtaagatgacctgtcatca 29380960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.000000009
Query Start/End: Original strand, 11 - 49
Target Start/End: Complemental strand, 29765429 - 29765391
Alignment:
Q  11 aaaaacatgctaagaataacgtaggatgacatgtcatca 49  Q
    ||||||||||||||||||||||| |||||| ||||||||    
T  29765429 aaaaacatgctaagaataacgtaagatgacctgtcatca 29765391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 15557416 - 15557461
Alignment:
Q  1 aaaatgactgaaaaacatgctaagaataacgtaggatgacatgtca 46  Q
    |||||||||||||||||  |||||||||| ||| ||||||||||||    
T  15557416 aaaatgactgaaaaacagactaagaataatgtaagatgacatgtca 15557461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 15058552 - 15058520
Alignment:
Q  1 aaaatgactgaaaaacatgctaagaataacgta 33  Q
    ||||||||| |||||||||||||||||||||||    
T  15058552 aaaatgactaaaaaacatgctaagaataacgta 15058520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 49
Target Start/End: Original strand, 17510957 - 17511001
Alignment:
Q  5 tgactgaaaaacatgctaagaataacgtaggatgacatgtcatca 49  Q
    ||||||||||||||||||||||||| ||| |||||| | ||||||    
T  17510957 tgactgaaaaacatgctaagaataatgtaagatgacctatcatca 17511001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 18836841 - 18836889
Alignment:
Q  1 aaaatgactgaaaaacatgctaagaataacgtaggatgacatgtcatca 49  Q
    ||||||| ||||||||||||||||||||| ||| |||||  ||||||||    
T  18836841 aaaatgattgaaaaacatgctaagaataatgtaagatgatctgtcatca 18836889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 49
Target Start/End: Original strand, 22501890 - 22501930
Alignment:
Q  9 tgaaaaacatgctaagaataacgtaggatgacatgtcatca 49  Q
    ||||||||||| ||||||||||||| ||||| |||||||||    
T  22501890 tgaaaaacatgataagaataacgtaagatgatatgtcatca 22501930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 23867877 - 23867829
Alignment:
Q  1 aaaatgactgaaaaacatgctaagaataacgtaggatgacatgtcatca 49  Q
    |||||| ||||||||||| |||||||| ||||| |||||| ||||||||    
T  23867877 aaaatgcctgaaaaacatactaagaattacgtaagatgacctgtcatca 23867829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 24090926 - 24090894
Alignment:
Q  1 aaaatgactgaaaaacatgctaagaataacgta 33  Q
    ||||| |||||||||||||||||||||||||||    
T  24090926 aaaataactgaaaaacatgctaagaataacgta 24090894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 25227308 - 25227356
Alignment:
Q  1 aaaatgactgaaaaacatgctaagaataacgtaggatgacatgtcatca 49  Q
    ||||| |||||||||| |||||||||||| ||| |||||| ||||||||    
T  25227308 aaaataactgaaaaacctgctaagaataatgtaagatgacctgtcatca 25227356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 28; E-Value: 0.0000005
Query Start/End: Original strand, 10 - 49
Target Start/End: Original strand, 6286340 - 6286379
Alignment:
Q  10 gaaaaacatgctaagaataacgtaggatgacatgtcatca 49  Q
    |||| ||||||||||||||||||| |||||| ||||||||    
T  6286340 gaaagacatgctaagaataacgtaagatgacctgtcatca 6286379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 28; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 17976280 - 17976319
Alignment:
Q  1 aaaatgactgaaaaacatgctaagaataacgtaggatgac 40  Q
    ||||||||| ||||||||||||| ||||||||| ||||||    
T  17976280 aaaatgactaaaaaacatgctaaaaataacgtaagatgac 17976319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 28; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 24520050 - 24520019
Alignment:
Q  1 aaaatgactgaaaaacatgctaagaataacgt 32  Q
    ||||| ||||||||||||||||||||||||||    
T  24520050 aaaataactgaaaaacatgctaagaataacgt 24520019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 28; E-Value: 0.0000005
Query Start/End: Original strand, 10 - 49
Target Start/End: Original strand, 24750883 - 24750922
Alignment:
Q  10 gaaaaacatgctaagaataacgtaggatgacatgtcatca 49  Q
    |||||||||||||||||||| ||| ||| |||||||||||    
T  24750883 gaaaaacatgctaagaataatgtaagataacatgtcatca 24750922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 41; Significance: 0.000000000000009; HSPs: 30)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 41; E-Value: 0.000000000000009
Query Start/End: Original strand, 5 - 49
Target Start/End: Complemental strand, 25572522 - 25572478
Alignment:
Q  5 tgactgaaaaacatgctaagaataacgtaggatgacatgtcatca 49  Q
    |||||||||||||||||||||||||||||||||||| ||||||||    
T  25572522 tgactgaaaaacatgctaagaataacgtaggatgacttgtcatca 25572478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 38; E-Value: 0.0000000000006
Query Start/End: Original strand, 8 - 49
Target Start/End: Original strand, 17831749 - 17831790
Alignment:
Q  8 ctgaaaaacatgctaagaataacgtaggatgacatgtcatca 49  Q
    |||||||||||||||||||||||||| |||||||||||||||    
T  17831749 ctgaaaaacatgctaagaataacgtaagatgacatgtcatca 17831790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 38; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 29988006 - 29988055
Alignment:
Q  1 aaaatgactgaaaaacatgctaagaataacgtaggatgacatgtcatcaa 50  Q
    ||||||||||||||||||||||| ||||||||| |||||| |||||||||    
T  29988006 aaaatgactgaaaaacatgctaaaaataacgtaagatgacctgtcatcaa 29988055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 37; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 23214873 - 23214825
Alignment:
Q  1 aaaatgactgaaaaacatgctaagaataacgtaggatgacatgtcatca 49  Q
    ||||| ||||||||||||||||||||||||||| |||||| ||||||||    
T  23214873 aaaataactgaaaaacatgctaagaataacgtaagatgacctgtcatca 23214825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 37; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 34488906 - 34488954
Alignment:
Q  1 aaaatgactgaaaaacatgctaagaataacgtaggatgacatgtcatca 49  Q
    ||||||||||||||||||||||||||||||||| |||||| || |||||    
T  34488906 aaaatgactgaaaaacatgctaagaataacgtaagatgacctgccatca 34488954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 36; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 20102941 - 20102890
Alignment:
Q  1 aaaatgactgaaaaacatgctaagaataacgtaggatgacatgtcatcaatt 52  Q
    ||||||||||||||| ||||||| ||||||||| |||| |||||||||||||    
T  20102941 aaaatgactgaaaaatatgctaaaaataacgtaagatggcatgtcatcaatt 20102890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 35; E-Value: 0.00000000003
Query Start/End: Original strand, 7 - 49
Target Start/End: Original strand, 24142462 - 24142504
Alignment:
Q  7 actgaaaaacatgctaagaataacgtaggatgacatgtcatca 49  Q
    |||||||||||||||||||||||| || |||||||||||||||    
T  24142462 actgaaaaacatgctaagaataacataagatgacatgtcatca 24142504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 25400786 - 25400736
Alignment:
Q  1 aaaatgactgaaaaacatgctaagaataacgtaggatgacatgtcatcaat 51  Q
    |||||||||||||||||||||||||||||||||  ||||| | ||||||||    
T  25400786 aaaatgactgaaaaacatgctaagaataacgtaaaatgacctctcatcaat 25400736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 19003813 - 19003764
Alignment:
Q  1 aaaatgactgaaaaacatgctaagaataacgtaggatgacatgtcatcaa 50  Q
    ||||| |||||||||||||| |||||||||||| ||| ||||||||||||    
T  19003813 aaaataactgaaaaacatgccaagaataacgtaagatcacatgtcatcaa 19003764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 19761629 - 19761580
Alignment:
Q  1 aaaatgactgaaaaacatgctaagaataacgtaggatgacatgtcatcaa 50  Q
    |||||||||||| |||||||||| ||||||||| |||||| |||||||||    
T  19761629 aaaatgactgaataacatgctaataataacgtaagatgacctgtcatcaa 19761580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 24162059 - 24162014
Alignment:
Q  1 aaaatgactgaaaaacatgctaagaataacgtaggatgacatgtca 46  Q
    |||||||||||||||||||||||||||||||||  ||||| |||||    
T  24162059 aaaatgactgaaaaacatgctaagaataacgtaaaatgacctgtca 24162014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 15691317 - 15691361
Alignment:
Q  1 aaaatgactgaaaaacatgctaagaataacgtaggatgacatgtc 45  Q
    ||||||||| ||||| ||||||||||||||||| |||||||||||    
T  15691317 aaaatgactaaaaaatatgctaagaataacgtaagatgacatgtc 15691361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 19053150 - 19053198
Alignment:
Q  1 aaaatgactgaaaaacatgctaagaataacgtaggatgacatgtcatca 49  Q
    ||||| ||||| |||||||||||||||||||||  ||||||||||||||    
T  19053150 aaaataactgataaacatgctaagaataacgtaaaatgacatgtcatca 19053198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 23338940 - 23338988
Alignment:
Q  1 aaaatgactgaaaaacatgctaagaataacgtaggatgacatgtcatca 49  Q
    ||||||| |||||||||||||||||||||| || |||||| ||||||||    
T  23338940 aaaatgattgaaaaacatgctaagaataacctaagatgacctgtcatca 23338988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.0000000005
Query Start/End: Original strand, 11 - 51
Target Start/End: Original strand, 26315245 - 26315285
Alignment:
Q  11 aaaaacatgctaagaataacgtaggatgacatgtcatcaat 51  Q
    ||||| ||||||||||||||||| |||||||||||||||||    
T  26315245 aaaaaaatgctaagaataacgtaagatgacatgtcatcaat 26315285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 32415878 - 32415830
Alignment:
Q  1 aaaatgactgaaaaacatgctaagaataacgtaggatgacatgtcatca 49  Q
    ||||| ||||||||| ||||||||||||| ||| |||||||||||||||    
T  32415878 aaaattactgaaaaatatgctaagaataatgtaagatgacatgtcatca 32415830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 49
Target Start/End: Original strand, 18939574 - 18939617
Alignment:
Q  6 gactgaaaaacatgctaagaataacgtaggatgacatgtcatca 49  Q
    |||||||||||||| ||||||||||||| |||||| ||||||||    
T  18939574 gactgaaaaacatgttaagaataacgtaagatgacctgtcatca 18939617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.000000002
Query Start/End: Original strand, 7 - 50
Target Start/End: Complemental strand, 20548495 - 20548452
Alignment:
Q  7 actgaaaaacatgctaagaataacgtaggatgacatgtcatcaa 50  Q
    |||||||||||||||| |||||||||| |||||| |||||||||    
T  20548495 actgaaaaacatgctaggaataacgtaagatgacctgtcatcaa 20548452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 51
Target Start/End: Original strand, 34132142 - 34132185
Alignment:
Q  8 ctgaaaaacatgctaagaataacgtaggatgacatgtcatcaat 51  Q
    |||||||||||||||||||||| ||| ||||||||| |||||||    
T  34132142 ctgaaaaacatgctaagaataaagtaagatgacatgccatcaat 34132185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.000000009
Query Start/End: Original strand, 7 - 49
Target Start/End: Original strand, 21352970 - 21353012
Alignment:
Q  7 actgaaaaacatgctaagaataacgtaggatgacatgtcatca 49  Q
    |||||||||||||||||||||||| || |||||| ||||||||    
T  21352970 actgaaaaacatgctaagaataacataagatgacctgtcatca 21353012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 22797468 - 22797422
Alignment:
Q  1 aaaatgactgaaaaacatgctaagaataacgtaggatgacatgtcat 47  Q
    |||||||||||||||||||| || ||||||||| |||||| ||||||    
T  22797468 aaaatgactgaaaaacatgcgaataataacgtaagatgacctgtcat 22797422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.000000009
Query Start/End: Original strand, 3 - 49
Target Start/End: Complemental strand, 23110242 - 23110196
Alignment:
Q  3 aatgactgaaaaacatgctaagaataacgtaggatgacatgtcatca 49  Q
    ||||||| ||||||||| ||||||||||||| ||||||| |||||||    
T  23110242 aatgactaaaaaacatgttaagaataacgtaagatgacacgtcatca 23110196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.000000009
Query Start/End: Original strand, 6 - 40
Target Start/End: Complemental strand, 24263793 - 24263759
Alignment:
Q  6 gactgaaaaacatgctaagaataacgtaggatgac 40  Q
    |||||||||||||||||||||||||||| ||||||    
T  24263793 gactgaaaaacatgctaagaataacgtaagatgac 24263759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.000000009
Query Start/End: Original strand, 7 - 49
Target Start/End: Complemental strand, 24513238 - 24513196
Alignment:
Q  7 actgaaaaacatgctaagaataacgtaggatgacatgtcatca 49  Q
    ||||||||||||||||||||||||||| |||||| ||| ||||    
T  24513238 actgaaaaacatgctaagaataacgtaagatgacctgtaatca 24513196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 17469606 - 17469569
Alignment:
Q  1 aaaatgactgaaaaacatgctaagaataacgtaggatg 38  Q
    ||||||| ||||||||||||||||||||||||| ||||    
T  17469606 aaaatgattgaaaaacatgctaagaataacgtaagatg 17469569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 26069298 - 26069347
Alignment:
Q  1 aaaatgactgaaaaacatgctaagaataacgtaggatgacatgtcatcaa 50  Q
    ||||||||| ||||||||| ||||||||||||| ||| || |||||||||    
T  26069298 aaaatgactaaaaaacatgttaagaataacgtaagataacttgtcatcaa 26069347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 47
Target Start/End: Original strand, 26348492 - 26348537
Alignment:
Q  2 aaatgactgaaaaacatgctaagaataacgtaggatgacatgtcat 47  Q
    ||||||||||||||||| ||||||||||||||  ||||| ||||||    
T  26348492 aaatgactgaaaaacatactaagaataacgtaaaatgacctgtcat 26348537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 26117486 - 26117534
Alignment:
Q  1 aaaatgactgaaaaacatgctaagaataacgtaggatgacatgtcatca 49  Q
    ||||||| | ||||||||||||||||||| ||| ||||||||| |||||    
T  26117486 aaaatgattaaaaaacatgctaagaataatgtaagatgacatgccatca 26117534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 31600123 - 31600075
Alignment:
Q  1 aaaatgactgaaaaacatgctaagaataacgtaggatgacatgtcatca 49  Q
    |||| |||| ||||||||||||||||||||||| || ||| ||||||||    
T  31600123 aaaaagacttaaaaacatgctaagaataacgtaagaggacctgtcatca 31600075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 28; E-Value: 0.0000005
Query Start/End: Original strand, 11 - 50
Target Start/End: Original strand, 28280342 - 28280381
Alignment:
Q  11 aaaaacatgctaagaataacgtaggatgacatgtcatcaa 50  Q
    ||||| ||||||| ||||||||| ||||||||||||||||    
T  28280342 aaaaatatgctaaaaataacgtaagatgacatgtcatcaa 28280381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 41; Significance: 0.000000000000009; HSPs: 34)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 41; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 17891780 - 17891828
Alignment:
Q  1 aaaatgactgaaaaacatgctaagaataacgtaggatgacatgtcatca 49  Q
    ||||||||||||||||||| ||||||||||||| |||||||||||||||    
T  17891780 aaaatgactgaaaaacatgttaagaataacgtaagatgacatgtcatca 17891828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 39; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 16157132 - 16157082
Alignment:
Q  1 aaaatgactgaaaaacatgctaagaataacgtaggatgacatgtcatcaat 51  Q
    ||||||||||||||||||||||||||||| ||| |||||| ||||||||||    
T  16157132 aaaatgactgaaaaacatgctaagaataatgtaagatgacctgtcatcaat 16157082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 38; E-Value: 0.0000000000006
Query Start/End: Original strand, 7 - 48
Target Start/End: Complemental strand, 18120587 - 18120546
Alignment:
Q  7 actgaaaaacatgctaagaataacgtaggatgacatgtcatc 48  Q
    ||||||||||||||||||||||||||| ||||||||||||||    
T  18120587 actgaaaaacatgctaagaataacgtaagatgacatgtcatc 18120546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 38; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 21905775 - 21905824
Alignment:
Q  1 aaaatgactgaaaaacatgctaagaataacgtaggatgacatgtcatcaa 50  Q
    |||||||||||||||||||||||||||||| || |||||| |||||||||    
T  21905775 aaaatgactgaaaaacatgctaagaataacataagatgacctgtcatcaa 21905824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 38; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 23010091 - 23010042
Alignment:
Q  1 aaaatgactgaaaaacatgctaagaataacgtaggatgacatgtcatcaa 50  Q
    ||||||||||||||||||||||||||||||||| |||||| ||| |||||    
T  23010091 aaaatgactgaaaaacatgctaagaataacgtaagatgacttgttatcaa 23010042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 37; E-Value: 0.000000000002
Query Start/End: Original strand, 3 - 51
Target Start/End: Original strand, 29144686 - 29144734
Alignment:
Q  3 aatgactgaaaaacatgctaagaataacgtaggatgacatgtcatcaat 51  Q
    ||||||| ||||||||||||||||||||||| |||||| ||||||||||    
T  29144686 aatgactaaaaaacatgctaagaataacgtaagatgacctgtcatcaat 29144734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.00000000003
Query Start/End: Original strand, 7 - 49
Target Start/End: Original strand, 25537611 - 25537653
Alignment:
Q  7 actgaaaaacatgctaagaataacgtaggatgacatgtcatca 49  Q
    ||||||||||||||||||||||||||| |||||| ||||||||    
T  25537611 actgaaaaacatgctaagaataacgtaagatgacctgtcatca 25537653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 32130747 - 32130697
Alignment:
Q  1 aaaatgactgaaaaacatgctaagaataacgtaggatgacatgtcatcaat 51  Q
    ||||||||||| |||||| |||||||||||||| |||||| ||||||||||    
T  32130747 aaaatgactgataaacatactaagaataacgtaagatgacctgtcatcaat 32130697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 32139382 - 32139332
Alignment:
Q  1 aaaatgactgaaaaacatgctaagaataacgtaggatgacatgtcatcaat 51  Q
    ||||||||||| |||||| |||||||||||||| |||||| ||||||||||    
T  32139382 aaaatgactgataaacatactaagaataacgtaagatgacctgtcatcaat 32139332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 28918237 - 28918269
Alignment:
Q  1 aaaatgactgaaaaacatgctaagaataacgta 33  Q
    |||||||||||||||||||||||||||||||||    
T  28918237 aaaatgactgaaaaacatgctaagaataacgta 28918269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 35680148 - 35680100
Alignment:
Q  1 aaaatgactgaaaaacatgctaagaataacgtaggatgacatgtcatca 49  Q
    ||||||||| ||||||||||||||||||||||| |||| | ||||||||    
T  35680148 aaaatgacttaaaaacatgctaagaataacgtaagatggcctgtcatca 35680100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.0000000005
Query Start/End: Original strand, 11 - 51
Target Start/End: Complemental strand, 45572403 - 45572363
Alignment:
Q  11 aaaaacatgctaagaataacgtaggatgacatgtcatcaat 51  Q
    ||||||||||||||| ||||||| |||||||||||||||||    
T  45572403 aaaaacatgctaagattaacgtaagatgacatgtcatcaat 45572363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.0000000005
Query Start/End: Original strand, 11 - 51
Target Start/End: Complemental strand, 45576070 - 45576030
Alignment:
Q  11 aaaaacatgctaagaataacgtaggatgacatgtcatcaat 51  Q
    ||||||||||||||| ||||||| |||||||||||||||||    
T  45576070 aaaaacatgctaagattaacgtaagatgacatgtcatcaat 45576030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.0000000005
Query Start/End: Original strand, 11 - 51
Target Start/End: Complemental strand, 45579737 - 45579697
Alignment:
Q  11 aaaaacatgctaagaataacgtaggatgacatgtcatcaat 51  Q
    ||||||||||||||| ||||||| |||||||||||||||||    
T  45579737 aaaaacatgctaagattaacgtaagatgacatgtcatcaat 45579697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.0000000005
Query Start/End: Original strand, 11 - 51
Target Start/End: Complemental strand, 45583404 - 45583364
Alignment:
Q  11 aaaaacatgctaagaataacgtaggatgacatgtcatcaat 51  Q
    ||||||||||||||| ||||||| |||||||||||||||||    
T  45583404 aaaaacatgctaagattaacgtaagatgacatgtcatcaat 45583364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.0000000005
Query Start/End: Original strand, 11 - 51
Target Start/End: Complemental strand, 45587071 - 45587031
Alignment:
Q  11 aaaaacatgctaagaataacgtaggatgacatgtcatcaat 51  Q
    ||||||||||||||| ||||||| |||||||||||||||||    
T  45587071 aaaaacatgctaagattaacgtaagatgacatgtcatcaat 45587031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.0000000005
Query Start/End: Original strand, 11 - 51
Target Start/End: Complemental strand, 45590738 - 45590698
Alignment:
Q  11 aaaaacatgctaagaataacgtaggatgacatgtcatcaat 51  Q
    ||||||||||||||| ||||||| |||||||||||||||||    
T  45590738 aaaaacatgctaagattaacgtaagatgacatgtcatcaat 45590698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.0000000005
Query Start/End: Original strand, 11 - 51
Target Start/End: Complemental strand, 45594405 - 45594365
Alignment:
Q  11 aaaaacatgctaagaataacgtaggatgacatgtcatcaat 51  Q
    ||||||||||||||| ||||||| |||||||||||||||||    
T  45594405 aaaaacatgctaagattaacgtaagatgacatgtcatcaat 45594365  T

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Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.0000000005
Query Start/End: Original strand, 11 - 51
Target Start/End: Complemental strand, 45598072 - 45598032
Alignment:
Q  11 aaaaacatgctaagaataacgtaggatgacatgtcatcaat 51  Q
    ||||||||||||||| ||||||| |||||||||||||||||    
T  45598072 aaaaacatgctaagattaacgtaagatgacatgtcatcaat 45598032  T

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Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.0000000005
Query Start/End: Original strand, 11 - 51
Target Start/End: Complemental strand, 45601739 - 45601699
Alignment:
Q  11 aaaaacatgctaagaataacgtaggatgacatgtcatcaat 51  Q
    ||||||||||||||| ||||||| |||||||||||||||||    
T  45601739 aaaaacatgctaagattaacgtaagatgacatgtcatcaat 45601699  T

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Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.0000000005
Query Start/End: Original strand, 11 - 51
Target Start/End: Complemental strand, 45605406 - 45605366
Alignment:
Q  11 aaaaacatgctaagaataacgtaggatgacatgtcatcaat 51  Q
    ||||||||||||||| ||||||| |||||||||||||||||    
T  45605406 aaaaacatgctaagattaacgtaagatgacatgtcatcaat 45605366  T

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Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.0000000005
Query Start/End: Original strand, 11 - 51
Target Start/End: Complemental strand, 45609073 - 45609033
Alignment:
Q  11 aaaaacatgctaagaataacgtaggatgacatgtcatcaat 51  Q
    ||||||||||||||| ||||||| |||||||||||||||||    
T  45609073 aaaaacatgctaagattaacgtaagatgacatgtcatcaat 45609033  T

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Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.0000000005
Query Start/End: Original strand, 11 - 51
Target Start/End: Complemental strand, 45612740 - 45612700
Alignment:
Q  11 aaaaacatgctaagaataacgtaggatgacatgtcatcaat 51  Q
    ||||||||||||||| ||||||| |||||||||||||||||    
T  45612740 aaaaacatgctaagattaacgtaagatgacatgtcatcaat 45612700  T

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Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.0000000005
Query Start/End: Original strand, 11 - 51
Target Start/End: Complemental strand, 45616407 - 45616367
Alignment:
Q  11 aaaaacatgctaagaataacgtaggatgacatgtcatcaat 51  Q
    ||||||||||||||| ||||||| |||||||||||||||||    
T  45616407 aaaaacatgctaagattaacgtaagatgacatgtcatcaat 45616367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 29892239 - 29892286
Alignment:
Q  1 aaaatgactgaaaaacatgctaagaataacgtaggatgacatgtcatc 48  Q
    ||||| ||||||||| ||| ||||||||||||| ||||||||||||||    
T  29892239 aaaataactgaaaaatatgttaagaataacgtaagatgacatgtcatc 29892286  T

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Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.000000009
Query Start/End: Original strand, 7 - 49
Target Start/End: Original strand, 25196666 - 25196708
Alignment:
Q  7 actgaaaaacatgctaagaataacgtaggatgacatgtcatca 49  Q
    ||||||||||||| |||||||||| || |||||||||||||||    
T  25196666 actgaaaaacatgttaagaataacataagatgacatgtcatca 25196708  T

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Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 32137960 - 32137910
Alignment:
Q  1 aaaatgactgaaaaacatgctaagaataacgtaggatgacatgtcatcaat 51  Q
    ||||||||||| ||||||  ||||||||||||| |||||| ||||||||||    
T  32137960 aaaatgactgataaacataataagaataacgtaagatgacctgtcatcaat 32137910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 23861134 - 23861183
Alignment:
Q  1 aaaatgactgaaaaacatgctaagaataacgtaggatgacatgtcatcaa 50  Q
    ||||||||||||| | ||||||| ||||||||| |||||||||| |||||    
T  23861134 aaaatgactgaaatatatgctaaaaataacgtaagatgacatgtgatcaa 23861183  T

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Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 17351027 - 17351075
Alignment:
Q  1 aaaatgactgaaaaacatgctaagaataacgtaggatgacatgtcatca 49  Q
    ||||| ||||||||| ||| ||||||||||||| |||||| ||||||||    
T  17351027 aaaataactgaaaaatatgttaagaataacgtaagatgacttgtcatca 17351075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 51
Target Start/End: Original strand, 20853140 - 20853180
Alignment:
Q  11 aaaaacatgctaagaataacgtaggatgacatgtcatcaat 51  Q
    ||||||||||||| ||||||||  |||||||||||||||||    
T  20853140 aaaaacatgctaataataacgtgagatgacatgtcatcaat 20853180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 29
Target Start/End: Complemental strand, 27907570 - 27907542
Alignment:
Q  1 aaaatgactgaaaaacatgctaagaataa 29  Q
    |||||||||||||||||||||||||||||    
T  27907570 aaaatgactgaaaaacatgctaagaataa 27907542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 34369372 - 34369420
Alignment:
Q  1 aaaatgactgaaaaacatgctaagaataacgtaggatgacatgtcatca 49  Q
    ||||| |||||||||||||||||||||||| || |||||  ||||||||    
T  34369372 aaaataactgaaaaacatgctaagaataacataagatgatctgtcatca 34369420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 28; E-Value: 0.0000005
Query Start/End: Original strand, 7 - 50
Target Start/End: Complemental strand, 24086348 - 24086305
Alignment:
Q  7 actgaaaaacatgctaagaataacgtaggatgacatgtcatcaa 50  Q
    ||||||||||||||||||||||||||| | |||| |||| ||||    
T  24086348 actgaaaaacatgctaagaataacgtaagttgacctgtcgtcaa 24086305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 28; E-Value: 0.0000005
Query Start/End: Original strand, 6 - 49
Target Start/End: Original strand, 32087102 - 32087145
Alignment:
Q  6 gactgaaaaacatgctaagaataacgtaggatgacatgtcatca 49  Q
    |||| ||||| ||||||| ||||||||| |||||||||||||||    
T  32087102 gactaaaaaatatgctaataataacgtaagatgacatgtcatca 32087145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0555 (Bit Score: 38; Significance: 0.0000000000006; HSPs: 1)
Name: scaffold0555
Description:

Target: scaffold0555; HSP #1
Raw Score: 38; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 6502 - 6551
Alignment:
Q  1 aaaatgactgaaaaacatgctaagaataacgtaggatgacatgtcatcaa 50  Q
    ||||| ||||||||||||||||||||||||||| ||| ||||||||||||    
T  6502 aaaataactgaaaaacatgctaagaataacgtaagataacatgtcatcaa 6551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 37; Significance: 0.000000000002; HSPs: 2)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 37; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 24851 - 24899
Alignment:
Q  1 aaaatgactgaaaaacatgctaagaataacgtaggatgacatgtcatca 49  Q
    |||||||||||||||||||||||||||||| || |||||||||| ||||    
T  24851 aaaatgactgaaaaacatgctaagaataacataagatgacatgttatca 24899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019; HSP #2
Raw Score: 33; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 35227 - 35271
Alignment:
Q  1 aaaatgactgaaaaacatgctaagaataacgtaggatgacatgtc 45  Q
    |||||||||||||||||||||||||||||| || ||| |||||||    
T  35227 aaaatgactgaaaaacatgctaagaataacataagataacatgtc 35271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0386 (Bit Score: 35; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0386
Description:

Target: scaffold0386; HSP #1
Raw Score: 35; E-Value: 0.00000000003
Query Start/End: Original strand, 5 - 47
Target Start/End: Complemental strand, 4916 - 4874
Alignment:
Q  5 tgactgaaaaacatgctaagaataacgtaggatgacatgtcat 47  Q
    ||||||||||||||||||||||||||||| |||||| ||||||    
T  4916 tgactgaaaaacatgctaagaataacgtaagatgacttgtcat 4874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 34; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 34; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 92876 - 92827
Alignment:
Q  1 aaaatgactgaaaaacatgctaagaataacgtaggatgacatgtcatcaa 50  Q
    ||||| ||||||||||||||||||||||||||| ||| || |||||||||    
T  92876 aaaataactgaaaaacatgctaagaataacgtaagataacttgtcatcaa 92827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 34; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 34; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 192171 - 192220
Alignment:
Q  1 aaaatgactgaaaaacatgctaagaataacgtaggatgacatgtcatcaa 50  Q
    |||||||||||||| |||||||| ||||||||| |||||| |||||||||    
T  192171 aaaatgactgaaaaccatgctaaaaataacgtaagatgacctgtcatcaa 192220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0258 (Bit Score: 33; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 33; E-Value: 0.0000000005
Query Start/End: Original strand, 9 - 49
Target Start/End: Complemental strand, 20292 - 20252
Alignment:
Q  9 tgaaaaacatgctaagaataacgtaggatgacatgtcatca 49  Q
    ||||||||||||||||||||||||| |||||| ||||||||    
T  20292 tgaaaaacatgctaagaataacgtaagatgacttgtcatca 20252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 33; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 33; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 6685 - 6733
Alignment:
Q  1 aaaatgactgaaaaacatgctaagaataacgtaggatgacatgtcatca 49  Q
    ||||||| ||||||||||||||| ||||| |||||||||| ||||||||    
T  6685 aaaatgaatgaaaaacatgctaaaaataatgtaggatgacttgtcatca 6733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0115 (Bit Score: 30; Significance: 0.00000003; HSPs: 1)
Name: scaffold0115
Description:

Target: scaffold0115; HSP #1
Raw Score: 30; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 36179 - 36130
Alignment:
Q  1 aaaatgactgaaaaacatgctaagaataacgtaggatgacatgtcatcaa 50  Q
    ||||||||||||||||||| ||||||||||||| ||| | ||| ||||||    
T  36179 aaaatgactgaaaaacatgataagaataacgtaagataatatgccatcaa 36130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 30; Significance: 0.00000003; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 30; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 243878 - 243830
Alignment:
Q  1 aaaatgactgaaaaacatgctaagaataacgtaggatgacatgtcatcaa 50  Q
    ||||||||| ||||| ||||||||||||||||| ||||| ||||||||||    
T  243878 aaaatgact-aaaaatatgctaagaataacgtaagatgatatgtcatcaa 243830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0637 (Bit Score: 29; Significance: 0.0000001; HSPs: 1)
Name: scaffold0637
Description:

Target: scaffold0637; HSP #1
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 7435 - 7483
Alignment:
Q  1 aaaatgactgaaaaacatgctaagaataacgtaggatgacatgtcatca 49  Q
    ||||||||||||||||||||| | ||||| ||| | |||||||||||||    
T  7435 aaaatgactgaaaaacatgcttacaataatgtaagttgacatgtcatca 7483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0871 (Bit Score: 28; Significance: 0.0000005; HSPs: 1)
Name: scaffold0871
Description:

Target: scaffold0871; HSP #1
Raw Score: 28; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 4007 - 4054
Alignment:
Q  1 aaaatgactgaaaaacatgctaagaataacgtaggatgacatgtcatc 48  Q
    ||||| ||| ||||||||||||||||||||||| || ||| |||||||    
T  4007 aaaataacttaaaaacatgctaagaataacgtaagaggacctgtcatc 4054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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