View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4287_high_7 (Length: 331)
Name: NF4287_high_7
Description: NF4287
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4287_high_7 |
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Alignment Details
Target: chr6 (Bit Score: 302; Significance: 1e-170; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 302; E-Value: 1e-170
Query Start/End: Original strand, 19 - 320
Target Start/End: Complemental strand, 32377472 - 32377171
Alignment:
| Q |
19 |
tctcatgcatgttaagcactgaagttggtgcagttctagcagtgatacgacgttatcccgaatttactcctgtctacaacatatcttctcctgaagaatc |
118 |
Q |
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| T |
32377472 |
tctcatgcatgttaagcactgaagttggtgcagttctagcagtgatacgacgttatcccgaatttactcctgtctacaacatatcttctcctgaagaatc |
32377373 |
T |
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| Q |
119 |
ctacgattcttccattattaattctttaaggtctctccgttctctcatattcaatcctcaacaagaatggcgcactatcgatccttccatttaccttact |
218 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32377372 |
ctacgattcttccattattaattctttaaggtctctccgttctctcatattcaatcctcaacaagaatggcgcactatcgatccttccatttaccttact |
32377273 |
T |
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| Q |
219 |
cctttccttgatgtcattcaaagcgatgatgttccagcgtccgcgacaggcgttgcactttcttccatactcaagattctcaagtttcaagtgtttgatg |
318 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32377272 |
cctttccttgatgtcattcaaagcgatgatgttccagcgtccgcgacaggcgttgcactttcttccatactcaagattctcaagtttcaagtgtttgatg |
32377173 |
T |
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| Q |
319 |
at |
320 |
Q |
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|| |
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| T |
32377172 |
at |
32377171 |
T |
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