View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4287_low_5 (Length: 390)
Name: NF4287_low_5
Description: NF4287
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4287_low_5 |
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Alignment Details
Target: chr8 (Bit Score: 207; Significance: 1e-113; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 54 - 375
Target Start/End: Original strand, 9049373 - 9049694
Alignment:
| Q |
54 |
gtacttcaaaaaattctgtaaatttttcatttgtctttgtagttttaatgacccttttgtttttactatctaattcatggaaatgaagtattgaaagaat |
153 |
Q |
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| T |
9049373 |
gtacttaaaaaaattctgttaatttttcatttttgtttatagttttagtgacccttttgtttctactttgtaattcatggaaatgaagcattgaaagaat |
9049472 |
T |
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| Q |
154 |
gaaaacaatgnnnnnnnnntcnnnnnnnnnnnngtagaagagagaaaaaagaaggtggatttttaggaaaccagtgaatcatgaaacagtgaataatact |
253 |
Q |
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| T |
9049473 |
gaaaacaacgtaaataaaatatttcttatttttgtagaagagagaaaaaagaaggtggatttttaggaaaccagtgaatcatgaaacagtgaataatact |
9049572 |
T |
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| Q |
254 |
caacaaagtacaccaacaaaattgaagcatgatgtggttactgctacaagtgtggcttcaaggacagatcaggatgagaaacatgctcttgctgtggcta |
353 |
Q |
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| T |
9049573 |
caacaaagtacaccaacaaaattgaagcatgatgtggttactgctacaagtgtggcttcaaggacagatcaggatgagaaacatgctcttgctgtggcta |
9049672 |
T |
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| Q |
354 |
tagctacagctgaggcagcaag |
375 |
Q |
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| T |
9049673 |
tggctacagctgaggcagcaag |
9049694 |
T |
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