View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4288_high_7 (Length: 319)
Name: NF4288_high_7
Description: NF4288
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4288_high_7 |
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Alignment Details
Target: chr1 (Bit Score: 287; Significance: 1e-161; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 287; E-Value: 1e-161
Query Start/End: Original strand, 16 - 302
Target Start/End: Complemental strand, 38316378 - 38316092
Alignment:
| Q |
16 |
ataatactatataaacttgaatgtaaatacagggacataatcgtccacgcacacgaaaagcgaggcgcaatacgcatcacgctaacaatataactcgaag |
115 |
Q |
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| T |
38316378 |
ataatactatataaacttgaatgtaaatacagggacataatcgtccacgcacacgaaaagcgaggcgcaatacgcatcacgctaacaatataactcgaag |
38316279 |
T |
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| Q |
116 |
tctgttttgctctgttcccgcctctttattttcacagcttcgaatcatacatagctcacgaaattcacacacgcttttcaaacataaaatcaaattcacc |
215 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
38316278 |
tctgttttgctctgttcccgcctctttattttcacagcttcgaatcatacatagctcacgaaattcacacacgcttttcaaacataaaatcaaattcacc |
38316179 |
T |
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| Q |
216 |
actccattcaatttctcattccaccgaaaattccaaatctctctcacacttcacttcacgaatatcagagcaaggtaacatcgatct |
302 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
38316178 |
actccattcaatttctcattccaccgaaaattccaaatctctctcacacttcacttcacgaatatcagagcaaggtaacatcgatct |
38316092 |
T |
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