View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4288_low_11 (Length: 307)
Name: NF4288_low_11
Description: NF4288
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4288_low_11 |
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Alignment Details
Target: chr7 (Bit Score: 214; Significance: 1e-117; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 78 - 291
Target Start/End: Complemental strand, 1702008 - 1701795
Alignment:
| Q |
78 |
gtttcttgaccaacaagaaaccgattttttctcaatgctgcaactcaacagcacttcttcacctcgccaccgtcacaaaacctccaccaaacgtcgttca |
177 |
Q |
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| T |
1702008 |
gtttcttgaccaacaagaaaccgattttttctcaatgctgcaactcaacagcacttcttcacctcgccaccgtcacaaaacctccaccaaacgtcgttca |
1701909 |
T |
|
| Q |
178 |
atggcgtcatcttcctccgaacgacgtgccaagaagcattcttttgaccaagatgatctcaccaacaatggcttctctgccatttcacttccttttagtg |
277 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
1701908 |
atggcgtcatcttcctccgaacgacgtgccaagaagcattcttttgaccaagatgatctcaccaacaatggcttctctgccatttcacttccttttagtg |
1701809 |
T |
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| Q |
278 |
tttgtggtaatgat |
291 |
Q |
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|||||||||||||| |
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| T |
1701808 |
tttgtggtaatgat |
1701795 |
T |
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