View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4290-Insertion-20 (Length: 136)
Name: NF4290-Insertion-20
Description: NF4290
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4290-Insertion-20 |
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| [»] chr4 (1 HSPs) |
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Alignment Details
Target: chr4 (Bit Score: 132; Significance: 6e-69; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 132; E-Value: 6e-69
Query Start/End: Original strand, 1 - 136
Target Start/End: Complemental strand, 183980 - 183845
Alignment:
| Q |
1 |
ggaaacacactaaataatagaatacagctcctctgtcgaagacccctcaagctcagactaaacgggagtttcccatcccttccaaattccaatgacagta |
100 |
Q |
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| T |
183980 |
ggaaacacactaaataatagaatacagctcctctgtcgaagacccctcaagctcagactaaacgggagtttcccatcccttccaaattccaatgacagta |
183881 |
T |
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| Q |
101 |
aaaatgaagacctctccatcatagtaatatgaacta |
136 |
Q |
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||||||||||| |||||||||||||||||||||||| |
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| T |
183880 |
aaaatgaagacttctccatcatagtaatatgaacta |
183845 |
T |
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