View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4290_high_2 (Length: 506)
Name: NF4290_high_2
Description: NF4290
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4290_high_2 |
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Alignment Details
Target: chr4 (Bit Score: 473; Significance: 0; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 473; E-Value: 0
Query Start/End: Original strand, 7 - 491
Target Start/End: Original strand, 53426418 - 53426902
Alignment:
| Q |
7 |
tcgaagaaaatattgaagcactttctctcagaccacacccataagagcattctgtttatgcatcatttagtacttctctctgaataagttatccttagtc |
106 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |
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| T |
53426418 |
tcgaagaaaatattgaagcactttctctcagaccacacccataagagcattctgtttatgcatcatttagtacttctctctgaataaattatccttagtc |
53426517 |
T |
|
| Q |
107 |
ataatcatattttgaaataaccgccacgccaacactgccaccttcaattggcatttcaatatcaatttcacatgatatatcctcctcattacattaagaa |
206 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
53426518 |
ataatcatattttgaaataaccgccacgccaacactgccaccttcaattggcatttcaatatcaatttcacatgatatatcctcctcattacattaagaa |
53426617 |
T |
|
| Q |
207 |
gaatgcagcatacatctacatatattgtgcttatcaaaaacttaattatctcagttccaattctgatatgaatagcagtctccatcactgccactggttc |
306 |
Q |
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||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
53426618 |
gaatgcaacatacatctacatatattgtgcttatcaaaaacttaattatctcagttccaattctgatatgaatagcagtctccatcactgccactggttc |
53426717 |
T |
|
| Q |
307 |
ctatttcttagtgcattgtcaagaactttcagcatactcagcatggctgtattatcagttttctgtgagttttttctttctcaaacttgaattggtttat |
406 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |
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| T |
53426718 |
ctatttcttagtgcattgtcaagaactttcagcatactcagcatggctgtattatcagctttctgtgagttttttctttctcaaacttgaattggtttat |
53426817 |
T |
|
| Q |
407 |
tcattcatacaccaagcctagatcttaattgaccctcattggaaggagtcataggtgaatatttggacatgcataatttgttttt |
491 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
53426818 |
tcattcatacaccaagcctagatcttaattgaccctcattggaaggagtcataggtgaatatttggacatgcataatttgttttt |
53426902 |
T |
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