View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4291-Insertion-20 (Length: 245)
Name: NF4291-Insertion-20
Description: NF4291
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4291-Insertion-20 |
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| [»] chr7 (2 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 127; Significance: 1e-65; HSPs: 2)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 69 - 245
Target Start/End: Complemental strand, 32016906 - 32016731
Alignment:
| Q |
69 |
aatccatgatttttctccaaagtcaatcccatgattttcctccaattcttagaaataacactacaatgcaagaaaagatgcgttgaagattctacctaag |
168 |
Q |
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| T |
32016906 |
aatccatgatttttctccaaagtcaatcccatgattttcctccaattcttagaaataacactacaatgcaagaaaatatgtgttgaagattctaccgaag |
32016807 |
T |
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| Q |
169 |
catcgcnnnnnnncacaattggtcgaacttttcgggtccaataaattctgaatggcaagattcctcccgtaggaatc |
245 |
Q |
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| T |
32016806 |
catcgc-aaaaaacacaattggtcgaacttttcggatccaataaattctgaatggcaagatttctcctgtaggaatc |
32016731 |
T |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 6 - 40
Target Start/End: Complemental strand, 32016945 - 32016911
Alignment:
| Q |
6 |
ctacttacctctcgcttccccactccaacattcaa |
40 |
Q |
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| T |
32016945 |
ctacttacctctcgcttccccactccaacattcaa |
32016911 |
T |
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