View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4291-Insertion-22 (Length: 260)
Name: NF4291-Insertion-22
Description: NF4291
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4291-Insertion-22 |
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| [»] chr4 (1 HSPs) |
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Alignment Details
Target: chr4 (Bit Score: 248; Significance: 1e-138; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 248; E-Value: 1e-138
Query Start/End: Original strand, 5 - 260
Target Start/End: Original strand, 49032578 - 49032833
Alignment:
| Q |
5 |
acttcttttatatcatacgaacaaaattgcttttcgtccgcaacacttctctatgcaataattgtcatttaaaaatctcaacccaatacacttccttaat |
104 |
Q |
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| T |
49032578 |
acttcttttatatcatacgaacaaaattgcttttcgtccgcaacacttctctatgcaataattgtcatttaaaaatctcaacccaatacacttccttaat |
49032677 |
T |
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| Q |
105 |
gaaagtcatctattagtaacttccattgtttctgtggaaacttctattgtatgttatatttaggtaatggacattccacactcattgtttgaggaaaagt |
204 |
Q |
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| T |
49032678 |
gaaagtcatctgttagtaacttccattgtttctgttgaaacttctattgtatgttatatttaggtaatggacattccacactcattgtttgaggaaaagt |
49032777 |
T |
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| Q |
205 |
tagaaaagctaaagcaatcaaaaggcattaaacatgacactggtctatcagccgat |
260 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
49032778 |
tagaaaagctaaagcaatcaaaaggcattaaacatgacactggtctatcagccgat |
49032833 |
T |
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