View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4291-Insertion-25 (Length: 322)
Name: NF4291-Insertion-25
Description: NF4291
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4291-Insertion-25 |
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| [»] chr3 (1 HSPs) |
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Alignment Details
Target: chr3 (Bit Score: 292; Significance: 1e-164; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 292; E-Value: 1e-164
Query Start/End: Original strand, 1 - 322
Target Start/End: Complemental strand, 38903317 - 38902999
Alignment:
| Q |
1 |
tatacacattcaaaactgaaaatacattcaaatctagaatattcaaatgccttataagttgtttcggttaatgaaaatgtagaacaacaaagttaaattc |
100 |
Q |
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| T |
38903317 |
tatacacattcaaaactgaaaatacattcaaatctagaatattcaaatgccttataagttgtttcggttaatgaaaatgtagaacaaaa---ttaaattc |
38903221 |
T |
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| Q |
101 |
agaccattttctttttccaaaactctaactatcaattaaaacataacttgtatatttatatctcaaaagcacgtcagaaatatttgatgataaataactg |
200 |
Q |
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| T |
38903220 |
agtccattttctttttccaaaactctaactaccaattaaaacataacttgtatatttatatctcaaaagcacgtcagaaatatttgatgataaataactg |
38903121 |
T |
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| Q |
201 |
aaattcttaaagaaaatgtcataatgaaaattaccagactttctaaaatagaaagattggcttctccacaacgattcccatatgcccgtgataccatcct |
300 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
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| T |
38903120 |
aaattcttaaagaaaatgtcataatgaaaattaccagactttctaaaatagaaagattggcttctccgcaacgattcccatatgcccgtgataccatcct |
38903021 |
T |
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| Q |
301 |
tctcgtagttccaaccttcatg |
322 |
Q |
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|||||||||||||||||||||| |
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| T |
38903020 |
tctcgtagttccaaccttcatg |
38902999 |
T |
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