View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4291-Insertion-47 (Length: 137)
Name: NF4291-Insertion-47
Description: NF4291
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4291-Insertion-47 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 127; Significance: 6e-66; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 127; E-Value: 6e-66
Query Start/End: Original strand, 3 - 137
Target Start/End: Original strand, 13274789 - 13274923
Alignment:
| Q |
3 |
agtaattaggagtttttctatatatgtcttcaatatatgccaattgatatgttgccccaagatactaaataaaacttgtattgaacctttcttcctctct |
102 |
Q |
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| T |
13274789 |
agtaattaggagtttttctatatatgtcttcaatatatgccaattgatatgttgccccaagatactaaataaaacttgtatcgaacctttctttctctct |
13274888 |
T |
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| Q |
103 |
ctccttctcctggacaaataaaatttctaatttga |
137 |
Q |
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| T |
13274889 |
ctccttctcctggacaaataaaatttctaatttga |
13274923 |
T |
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Target: chr3 (Bit Score: 32; Significance: 0.000000003; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 62 - 105
Target Start/End: Original strand, 55454799 - 55454842
Alignment:
| Q |
62 |
agatactaaataaaacttgtattgaacctttcttcctctctctc |
105 |
Q |
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| T |
55454799 |
agatactaaataaaatttgtatcgaacctttcttcctctttctc |
55454842 |
T |
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