View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4291-Insertion-51 (Length: 49)
Name: NF4291-Insertion-51
Description: NF4291
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4291-Insertion-51 |
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| [»] chr6 (2 HSPs) |
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Alignment Details
Target: chr6 (Bit Score: 45; Significance: 1e-17; HSPs: 2)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 45; E-Value: 1e-17
Query Start/End: Original strand, 5 - 49
Target Start/End: Complemental strand, 13856086 - 13856042
Alignment:
| Q |
5 |
ctaacacaataccatccttcgtcaccaagtgagccaagagcatca |
49 |
Q |
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| T |
13856086 |
ctaacacaataccatccttcgtcaccaagtgagccaagagcatca |
13856042 |
T |
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Target: chr6; HSP #2
Raw Score: 33; E-Value: 0.0000000002
Query Start/End: Original strand, 5 - 45
Target Start/End: Complemental strand, 13852207 - 13852167
Alignment:
| Q |
5 |
ctaacacaataccatccttcgtcaccaagtgagccaagagc |
45 |
Q |
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| T |
13852207 |
ctaacacaataccatccttcgtcaccaagagagccgagagc |
13852167 |
T |
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