View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4291-Insertion-73 (Length: 228)
Name: NF4291-Insertion-73
Description: NF4291
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4291-Insertion-73 |
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| [»] chr5 (1 HSPs) |
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Alignment Details
Target: chr5 (Bit Score: 174; Significance: 9e-94; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 174; E-Value: 9e-94
Query Start/End: Original strand, 8 - 228
Target Start/End: Original strand, 9214444 - 9214663
Alignment:
| Q |
8 |
ttccaaaacattatcagtaagtatatattaatcggttactttaccttacatccaaatacttatggccagctagaagaagctcgtgagctacacgcactgg |
107 |
Q |
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| T |
9214444 |
ttccaaaacattatcagtaagtata--ttaatcggttactttaccttacatccaaatacttatggccagctagaagaagctcgtgagctacacgcactgg |
9214541 |
T |
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| Q |
108 |
caccgaggttggaactccaacaacttcttccaaattcccctttaaaccacacatcgtgcttcaatatnnnnnnnccatcaacaactttacttactcaaat |
207 |
Q |
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| T |
9214542 |
caccgaggttggaactccaacaacttcttctaaattcccctttaaaccacacatcgtgcttcaatataaaaaaaccatcaacaacgttacttactcaaat |
9214641 |
T |
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| Q |
208 |
aaaaaac-attttattgaacta |
228 |
Q |
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||||||| |||||||||||||| |
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| T |
9214642 |
aaaaaacaattttattgaacta |
9214663 |
T |
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