View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4291-Insertion-88 (Length: 231)
Name: NF4291-Insertion-88
Description: NF4291
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4291-Insertion-88 |
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Alignment Details
Target: chr5 (Bit Score: 181; Significance: 6e-98; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 181; E-Value: 6e-98
Query Start/End: Original strand, 5 - 225
Target Start/End: Original strand, 43134507 - 43134726
Alignment:
| Q |
5 |
agatgtattgtattttataactaaaacctttggtacaagttccttcttctcatcgatgtgggactcggtcaccaacacgttattctccaaaatggtataa |
104 |
Q |
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| T |
43134507 |
agatgtattgtattttataactaaa-cctttgatacaagttccttcttctcgtcgatgtgggactcagtcaccaacacattattctccaaaatggtataa |
43134605 |
T |
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| Q |
105 |
gcttgtaactaccagtaaaacctaacaagtcacaattacctcttctaataagaaagaacaaagtgtttgggatttgggtttcgtatattttgcccacatt |
204 |
Q |
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|||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||| |
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| T |
43134606 |
gcttgtaactactagtaaaacctaacaagtcacaactacctcttctaataagaaagaacaaagagtttgggatttgtgtttcgtatattttgcccacatt |
43134705 |
T |
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| Q |
205 |
gtagagaagaatagatattta |
225 |
Q |
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||||||||||||||||||||| |
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| T |
43134706 |
gtagagaagaatagatattta |
43134726 |
T |
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