View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4291_low_14 (Length: 249)
Name: NF4291_low_14
Description: NF4291
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4291_low_14 |
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Alignment Details
Target: chr2 (Bit Score: 217; Significance: 1e-119; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 15 - 231
Target Start/End: Complemental strand, 1905786 - 1905570
Alignment:
| Q |
15 |
tcatcacctgatctttcctccctttcccacggtgaaccaccaaccctcatggataatttggttcaagtatgcttcacagaagacaaattaagcataaatc |
114 |
Q |
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| T |
1905786 |
tcatcacctgatctttcctccctttcccacggtgaaccaccaaccctcatggataatttggttcaagtatgcttcacagaagacaaattaagcataaatc |
1905687 |
T |
|
| Q |
115 |
ataatgtactgcatgtatttccagaattcttgtagtaaaatattggtccgggaacaagcattaatttacttgcgttttagctatccttaatcctttgatt |
214 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
1905686 |
ataatgtactgcatgtatttccagaattcttgtagtaaaatattggtccgggaacaagcattaatttacttgcgttttagctatccttaatcctttgatt |
1905587 |
T |
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| Q |
215 |
gggggaatgagccatct |
231 |
Q |
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| T |
1905586 |
gggggaatgagccatct |
1905570 |
T |
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