View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4292-Insertion-7 (Length: 150)
Name: NF4292-Insertion-7
Description: NF4292
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4292-Insertion-7 |
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| [»] chr3 (1 HSPs) |
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Alignment Details
Target: chr3 (Bit Score: 150; Significance: 1e-79; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 150; E-Value: 1e-79
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 51719768 - 51719917
Alignment:
| Q |
1 |
atttcttttgccatgaacagggtcaggtgaacgataagaatcagcaagaagagtggaagtgaaataagttataaaagagaaagcaagtagaactgctggg |
100 |
Q |
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| T |
51719768 |
atttcttttgccatgaacagggtcaggtgaacgataagaatcagcaagaagagtggaagtgaaataagttataaaagagaaagcaagtagaactgctggg |
51719867 |
T |
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| Q |
101 |
ccagcaatccaacccatttgagctattgcccatgcaagtgataacactcc |
150 |
Q |
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| T |
51719868 |
ccagcaatccaacccatttgagctattgcccatgcaagtgataacactcc |
51719917 |
T |
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Target: chr1 (Bit Score: 74; Significance: 3e-34; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 74; E-Value: 3e-34
Query Start/End: Original strand, 2 - 143
Target Start/End: Original strand, 315065 - 315206
Alignment:
| Q |
2 |
tttcttttgccatgaacagggtcaggtgaacgataagaatcagcaagaagagtggaagtgaaataagttataaaagagaaagcaagtagaactgctgggc |
101 |
Q |
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| T |
315065 |
tttctcttgccatgaacaggatcaggtgaacggtaacaatcagcaagaagagtggaagtgaaataggtaatgaaagaaaatgcaaagagaactgcaggac |
315164 |
T |
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| Q |
102 |
cagcaatccaacccatttgagctattgcccatgcaagtgata |
143 |
Q |
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| T |
315165 |
cagctacccaacccatttgtgctattgcccatgctagtgata |
315206 |
T |
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