View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4292_low_18 (Length: 269)

Name: NF4292_low_18
Description: NF4292
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4292_low_18
NF4292_low_18
[»] chr8 (74 HSPs)
chr8 (9-241)||(28528721-28528942)
chr8 (5-241)||(28528556-28528781)
chr8 (100-269)||(28527831-28527989)
chr8 (1-241)||(28528015-28528247)
chr8 (126-241)||(28528183-28528298)
chr8 (126-269)||(28528858-28529001)
chr8 (9-237)||(28527696-28527915)
chr8 (5-241)||(28528381-28528616)
chr8 (160-220)||(1944424-1944484)
chr8 (160-220)||(4465097-4465157)
chr8 (160-220)||(4465731-4465791)
chr8 (160-220)||(8161164-8161224)
chr8 (160-220)||(8762248-8762308)
chr8 (160-220)||(9473472-9473532)
chr8 (160-220)||(25834744-25834804)
chr8 (144-220)||(27854075-27854151)
chr8 (160-220)||(32845811-32845871)
chr8 (160-220)||(36777828-36777888)
chr8 (160-220)||(41157884-41157944)
chr8 (160-220)||(41532460-41532520)
chr8 (1-100)||(28527655-28527756)
chr8 (2-152)||(28528305-28528444)
chr8 (160-220)||(1943681-1943741)
chr8 (160-212)||(8760991-8761043)
chr8 (160-220)||(8761616-8761676)
chr8 (160-220)||(25345233-25345293)
chr8 (160-220)||(25620040-25620100)
chr8 (160-220)||(25835376-25835436)
chr8 (160-212)||(25836009-25836061)
chr8 (160-212)||(32844441-32844493)
chr8 (160-220)||(32845068-32845128)
chr8 (160-220)||(44381413-44381473)
chr8 (160-211)||(1943057-1943108)
chr8 (161-220)||(7390556-7390615)
chr8 (126-239)||(45262268-45262391)
chr8 (160-220)||(8161888-8161948)
chr8 (160-212)||(8162521-8162573)
chr8 (160-220)||(12761472-12761532)
chr8 (160-212)||(24250447-24250499)
chr8 (160-220)||(24254791-24254850)
chr8 (160-220)||(25615767-25615827)
chr8 (160-220)||(25619403-25619463)
chr8 (160-220)||(32846444-32846504)
chr8 (160-220)||(34893337-34893397)
chr8 (160-212)||(41157270-41157322)
chr8 (160-212)||(41533093-41533145)
chr8 (160-212)||(41978202-41978254)
chr8 (160-212)||(44382034-44382086)
chr8 (160-220)||(7389920-7389980)
chr8 (1-44)||(1944424-1944467)
chr8 (1-44)||(4465114-4465157)
chr8 (1-44)||(8161181-8161224)
chr8 (1-44)||(8762248-8762291)
chr8 (1-44)||(9473472-9473515)
chr8 (165-232)||(25630026-25630093)
chr8 (1-44)||(25834761-25834804)
chr8 (1-44)||(32846444-32846487)
chr8 (1-44)||(36777828-36777871)
chr8 (1-44)||(41157884-41157927)
chr8 (166-220)||(15096891-15096945)
chr8 (165-239)||(25629815-25629886)
chr8 (1-44)||(1943681-1943724)
chr8 (1-44)||(4465748-4465791)
chr8 (1-44)||(7390556-7390599)
chr8 (1-44)||(8761616-8761659)
chr8 (1-36)||(24250464-24250499)
chr8 (8-63)||(25629815-25629870)
chr8 (1-56)||(25630026-25630081)
chr8 (1-44)||(25835393-25835436)
chr8 (1-44)||(27854075-27854118)
chr8 (1-44)||(32845068-32845111)
chr8 (5-44)||(32845811-32845850)
chr8 (1-44)||(44381430-44381473)
chr8 (1-63)||(45262268-45262329)
[»] chr7 (75 HSPs)
chr7 (126-220)||(40107665-40107759)
chr7 (126-220)||(20077758-20077852)
chr7 (143-220)||(40241419-40241496)
chr7 (160-220)||(31897442-31897502)
chr7 (160-220)||(36158460-36158520)
chr7 (126-240)||(728543-728662)
chr7 (160-220)||(9150879-9150939)
chr7 (160-220)||(17171599-17171659)
chr7 (160-220)||(24683037-24683097)
chr7 (160-220)||(27733697-27733757)
chr7 (160-220)||(29468680-29468740)
chr7 (160-220)||(33637402-33637462)
chr7 (160-220)||(49144777-49144837)
chr7 (160-220)||(4849687-4849747)
chr7 (160-220)||(7855714-7855774)
chr7 (143-215)||(12409292-12409363)
chr7 (160-220)||(20077436-20077496)
chr7 (160-220)||(24683767-24683827)
chr7 (160-220)||(34873051-34873111)
chr7 (160-220)||(39648601-39648661)
chr7 (160-211)||(24684400-24684451)
chr7 (160-215)||(32201102-32201157)
chr7 (160-215)||(35156121-35156176)
chr7 (160-212)||(690527-690579)
chr7 (160-212)||(27734301-27734353)
chr7 (160-212)||(29468056-29468108)
chr7 (160-220)||(49145542-49145602)
chr7 (1-44)||(39648618-39648661)
chr7 (1-44)||(39704184-39704227)
chr7 (161-212)||(44805825-44805876)
chr7 (166-204)||(728498-728536)
chr7 (166-220)||(12409563-12409616)
chr7 (149-215)||(38029344-38029410)
chr7 (160-205)||(4849068-4849113)
chr7 (160-205)||(33637924-33637969)
chr7 (160-212)||(9150286-9150338)
chr7 (160-212)||(17170974-17171026)
chr7 (168-220)||(24396754-24396806)
chr7 (166-238)||(32201465-32201537)
chr7 (160-220)||(40107471-40107530)
chr7 (160-212)||(48528044-48528096)
chr7 (1-44)||(9150879-9150922)
chr7 (1-44)||(17171599-17171642)
chr7 (1-44)||(24683054-24683097)
chr7 (1-44)||(27733714-27733757)
chr7 (1-44)||(29468680-29468723)
chr7 (1-44)||(33637419-33637462)
chr7 (1-44)||(40241453-40241496)
chr7 (1-44)||(49144794-49144837)
chr7 (166-220)||(12409401-12409455)
chr7 (166-220)||(20077659-20077712)
chr7 (166-220)||(36158683-36158736)
chr7 (166-215)||(728744-728793)
chr7 (1-62)||(32201476-32201537)
chr7 (4-44)||(4849687-4849727)
chr7 (160-196)||(21670430-21670466)
chr7 (172-220)||(26454969-26455017)
chr7 (160-212)||(31898075-31898127)
chr7 (160-196)||(39277015-39277051)
chr7 (164-212)||(39649238-39649286)
chr7 (1-44)||(7855731-7855774)
chr7 (5-44)||(12409577-12409616)
chr7 (1-44)||(20077453-20077496)
chr7 (1-44)||(24396754-24396797)
chr7 (1-44)||(24683784-24683827)
chr7 (1-44)||(26454974-26455017)
chr7 (5-44)||(31897463-31897502)
chr7 (1-44)||(34873051-34873094)
chr7 (5-44)||(36158481-36158520)
chr7 (5-44)||(40107720-40107759)
chr7 (1-39)||(728755-728793)
chr7 (1-39)||(35156138-35156176)
chr7 (166-220)||(39704184-39704238)
chr7 (144-220)||(32201309-32201384)
chr7 (8-44)||(36158700-36158736)
[»] chr5 (81 HSPs)
chr5 (129-238)||(29379249-29379359)
chr5 (126-220)||(19121593-19121687)
chr5 (126-220)||(42691941-42692035)
chr5 (136-213)||(5398874-5398951)
chr5 (126-220)||(3890772-3890866)
chr5 (160-220)||(752816-752876)
chr5 (160-220)||(12418908-12418968)
chr5 (160-220)||(17637436-17637496)
chr5 (160-220)||(25696171-25696231)
chr5 (160-220)||(26601298-26601358)
chr5 (160-220)||(33705388-33705448)
chr5 (160-220)||(34718163-34718223)
chr5 (160-220)||(34726003-34726063)
chr5 (160-220)||(36885529-36885589)
chr5 (160-220)||(41691847-41691907)
chr5 (160-220)||(42976029-42976089)
chr5 (160-220)||(43137021-43137081)
chr5 (126-220)||(3891000-3891093)
chr5 (126-212)||(5398771-5398856)
chr5 (160-212)||(754192-754244)
chr5 (160-220)||(6304553-6304613)
chr5 (160-212)||(6305186-6305238)
chr5 (160-220)||(18241848-18241908)
chr5 (160-220)||(25480874-25480934)
chr5 (160-220)||(30180662-30180722)
chr5 (160-220)||(34726643-34726703)
chr5 (160-220)||(35393121-35393180)
chr5 (160-220)||(43137653-43137713)
chr5 (160-212)||(43138286-43138338)
chr5 (160-215)||(3890579-3890634)
chr5 (175-226)||(22740699-22740750)
chr5 (166-220)||(25480528-25480582)
chr5 (160-214)||(42976653-42976707)
chr5 (160-220)||(753559-753619)
chr5 (160-220)||(2182081-2182141)
chr5 (160-212)||(26601935-26601987)
chr5 (160-220)||(35393747-35393806)
chr5 (160-220)||(39914547-39914607)
chr5 (160-220)||(42692310-42692370)
chr5 (161-220)||(25480658-25480716)
chr5 (1-44)||(30180662-30180705)
chr5 (5-54)||(22740705-22740754)
chr5 (163-220)||(41290296-41290352)
chr5 (160-220)||(3087166-3087225)
chr5 (160-212)||(12419825-12419877)
chr5 (1-97)||(29379297-29379394)
chr5 (160-212)||(33706019-33706070)
chr5 (160-212)||(34717538-34717590)
chr5 (160-212)||(41691224-41691276)
chr5 (144-220)||(42692083-42692158)
chr5 (1-44)||(752833-752876)
chr5 (1-44)||(17637453-17637496)
chr5 (126-220)||(18241662-18241763)
chr5 (1-44)||(25480528-25480571)
chr5 (1-44)||(25480874-25480917)
chr5 (1-44)||(26601315-26601358)
chr5 (1-44)||(33705405-33705448)
chr5 (1-44)||(34718163-34718206)
chr5 (1-44)||(34726020-34726063)
chr5 (1-44)||(35393747-35393790)
chr5 (1-44)||(36885546-36885589)
chr5 (1-44)||(41691847-41691890)
chr5 (1-44)||(42976046-42976089)
chr5 (1-44)||(43137038-43137081)
chr5 (1-63)||(14854237-14854299)
chr5 (181-239)||(14854241-14854299)
chr5 (160-212)||(25696802-25696854)
chr5 (164-212)||(30180037-30180085)
chr5 (1-44)||(2182081-2182124)
chr5 (1-57)||(3890596-3890656)
chr5 (1-44)||(3890823-3890866)
chr5 (1-44)||(6304570-6304613)
chr5 (5-44)||(19121593-19121632)
chr5 (5-44)||(35393121-35393160)
chr5 (1-44)||(42692310-42692353)
chr5 (1-44)||(43137670-43137713)
chr5 (166-220)||(41290422-41290476)
chr5 (7-44)||(41290439-41290476)
chr5 (1-38)||(42976670-42976707)
chr5 (8-44)||(3087189-3087225)
chr5 (5-37)||(5398919-5398951)
[»] scaffold0044 (5 HSPs)
scaffold0044 (126-220)||(87516-87610)
scaffold0044 (160-220)||(87185-87245)
scaffold0044 (5-44)||(87206-87245)
scaffold0044 (5-44)||(87571-87610)
scaffold0044 (143-220)||(87395-87471)
[»] scaffold1155 (3 HSPs)
scaffold1155 (126-220)||(385-479)
scaffold1155 (1-44)||(385-428)
scaffold1155 (1-39)||(1270-1308)
[»] scaffold0345 (3 HSPs)
scaffold0345 (126-220)||(9738-9832)
scaffold0345 (1-44)||(9789-9832)
scaffold0345 (1-39)||(8908-8946)
[»] scaffold0105 (3 HSPs)
scaffold0105 (126-220)||(29148-29242)
scaffold0105 (1-44)||(29148-29191)
scaffold0105 (1-39)||(30033-30071)
[»] chr6 (37 HSPs)
chr6 (126-220)||(19989236-19989330)
chr6 (126-220)||(33007510-33007604)
chr6 (136-213)||(14366194-14366271)
chr6 (160-220)||(1221093-1221153)
chr6 (160-220)||(4109291-4109351)
chr6 (160-220)||(24446500-24446560)
chr6 (160-220)||(4108658-4108718)
chr6 (160-212)||(4897222-4897274)
chr6 (160-220)||(35159470-35159530)
chr6 (166-220)||(33004425-33004479)
chr6 (160-220)||(4896590-4896650)
chr6 (160-212)||(33320701-33320753)
chr6 (160-212)||(35158911-35158963)
chr6 (160-212)||(1220468-1220520)
chr6 (160-212)||(9979348-9979400)
chr6 (160-212)||(14832424-14832476)
chr6 (160-220)||(21078198-21078258)
chr6 (160-212)||(24445875-24445927)
chr6 (160-220)||(33320179-33320239)
chr6 (1-44)||(1221093-1221136)
chr6 (1-44)||(19989592-19989635)
chr6 (160-203)||(21055102-21055145)
chr6 (1-44)||(24446500-24446543)
chr6 (1-44)||(33004425-33004468)
chr6 (1-44)||(33007510-33007553)
chr6 (166-220)||(14366327-14366381)
chr6 (166-220)||(19987937-19987990)
chr6 (174-220)||(19989592-19989638)
chr6 (20-65)||(8674560-8674605)
chr6 (20-65)||(8685239-8685284)
chr6 (5-44)||(4109291-4109330)
chr6 (1-44)||(14366327-14366370)
chr6 (1-44)||(35159470-35159513)
chr6 (196-241)||(8674560-8674605)
chr6 (196-241)||(8685239-8685284)
chr6 (5-37)||(14366194-14366226)
chr6 (160-196)||(15045172-15045208)
[»] chr4 (94 HSPs)
chr4 (127-220)||(49750604-49750697)
chr4 (126-220)||(54094592-54094686)
chr4 (126-213)||(54093214-54093301)
chr4 (160-220)||(9061242-9061302)
chr4 (160-220)||(39405346-39405406)
chr4 (160-220)||(39714129-39714189)
chr4 (160-220)||(50118700-50118760)
chr4 (146-220)||(4875742-4875816)
chr4 (126-220)||(54095243-54095337)
chr4 (160-220)||(2116796-2116856)
chr4 (160-220)||(2117430-2117490)
chr4 (160-220)||(3758622-3758682)
chr4 (160-220)||(8988436-8988496)
chr4 (160-220)||(20590301-20590361)
chr4 (160-220)||(24947383-24947443)
chr4 (160-220)||(29713287-29713347)
chr4 (160-220)||(37351336-37351396)
chr4 (160-220)||(43022743-43022803)
chr4 (160-220)||(47556056-47556116)
chr4 (160-220)||(52801597-52801657)
chr4 (136-220)||(54094192-54094276)
chr4 (161-220)||(22454166-22454225)
chr4 (160-213)||(8531562-8531615)
chr4 (160-212)||(8987179-8987231)
chr4 (160-220)||(8987804-8987864)
chr4 (160-220)||(12682064-12682124)
chr4 (160-220)||(24944667-24944727)
chr4 (160-212)||(29712677-29712729)
chr4 (160-220)||(37350704-37350764)
chr4 (126-202)||(40682457-40682532)
chr4 (160-212)||(43022197-43022249)
chr4 (160-220)||(43023260-43023320)
chr4 (160-220)||(49750967-49751027)
chr4 (160-212)||(50033934-50033986)
chr4 (165-220)||(48809057-48809112)
chr4 (166-220)||(54094992-54095046)
chr4 (160-205)||(5754841-5754886)
chr4 (160-205)||(46105676-46105721)
chr4 (160-212)||(17741020-17741072)
chr4 (160-212)||(37350079-37350131)
chr4 (160-220)||(46104871-46104931)
chr4 (161-220)||(54094475-54094534)
chr4 (160-214)||(46420360-46420414)
chr4 (160-220)||(24548657-24548715)
chr4 (160-205)||(24948016-24948061)
chr4 (160-205)||(47556687-47556732)
chr4 (166-215)||(54094714-54094763)
chr4 (160-220)||(9888026-9888086)
chr4 (160-212)||(9888659-9888711)
chr4 (160-212)||(39714806-39714858)
chr4 (160-220)||(49357575-49357635)
chr4 (160-212)||(52800972-52801024)
chr4 (1-44)||(2117430-2117473)
chr4 (1-44)||(3758622-3758665)
chr4 (1-44)||(8988436-8988479)
chr4 (1-44)||(20590301-20590344)
chr4 (1-44)||(24947400-24947443)
chr4 (1-44)||(29713287-29713330)
chr4 (1-44)||(37351336-37351379)
chr4 (160-211)||(39405966-39406016)
chr4 (1-44)||(43022743-43022786)
chr4 (1-44)||(47556073-47556116)
chr4 (1-44)||(49750604-49750647)
chr4 (1-44)||(52801597-52801640)
chr4 (1-44)||(54094592-54094635)
chr4 (1-44)||(54094992-54095035)
chr4 (166-220)||(22454388-22454441)
chr4 (160-214)||(42350842-42350896)
chr4 (126-220)||(54093090-54093184)
chr4 (166-220)||(54093324-54093378)
chr4 (171-220)||(23632870-23632919)
chr4 (166-215)||(54095103-54095152)
chr4 (1-37)||(54093214-54093250)
chr4 (1-44)||(2116796-2116839)
chr4 (1-44)||(8987804-8987847)
chr4 (5-44)||(9061263-9061302)
chr4 (5-44)||(22454186-22454225)
chr4 (1-44)||(24944684-24944727)
chr4 (1-44)||(37350704-37350747)
chr4 (5-44)||(39405367-39405406)
chr4 (5-44)||(39714150-39714189)
chr4 (1-44)||(43023260-43023303)
chr4 (1-44)||(49750967-49751010)
chr4 (5-44)||(50118721-50118760)
chr4 (1-44)||(54093324-54093367)
chr4 (166-220)||(23633031-23633085)
chr4 (126-204)||(49750756-49750833)
chr4 (166-220)||(54094309-54094362)
chr4 (1-39)||(54094714-54094752)
chr4 (126-167)||(54095140-54095181)
chr4 (5-37)||(8531562-8531594)
chr4 (8-44)||(22454405-22454441)
chr4 (8-44)||(24548657-24548693)
chr4 (8-44)||(54094475-54094511)
[»] scaffold0318 (2 HSPs)
scaffold0318 (143-220)||(6600-6677)
scaffold0318 (1-44)||(6634-6677)
[»] chr2 (43 HSPs)
chr2 (143-220)||(10129695-10129772)
chr2 (145-220)||(25882864-25882939)
chr2 (160-220)||(1513506-1513566)
chr2 (160-220)||(4290302-4290362)
chr2 (160-220)||(17837936-17837996)
chr2 (160-220)||(18091347-18091407)
chr2 (160-215)||(19487513-19487568)
chr2 (161-215)||(28609174-28609228)
chr2 (160-220)||(6931367-6931427)
chr2 (160-220)||(9543268-9543328)
chr2 (160-220)||(19484929-19484989)
chr2 (167-215)||(25883359-25883407)
chr2 (160-220)||(42781914-42781974)
chr2 (182-239)||(37073227-37073284)
chr2 (164-220)||(10875154-10875210)
chr2 (160-212)||(18091982-18092034)
chr2 (160-220)||(32676277-32676337)
chr2 (160-212)||(32676912-32676964)
chr2 (166-220)||(25883197-25883251)
chr2 (1-63)||(37073222-37073284)
chr2 (160-212)||(9543901-9543953)
chr2 (160-212)||(10048277-10048329)
chr2 (126-178)||(10129778-10129830)
chr2 (160-220)||(25236014-25236074)
chr2 (160-212)||(28608558-28608610)
chr2 (1-44)||(4290319-4290362)
chr2 (161-212)||(4290936-4290987)
chr2 (1-44)||(9543285-9543328)
chr2 (1-44)||(10129695-10129738)
chr2 (1-44)||(17837936-17837979)
chr2 (1-44)||(18091364-18091407)
chr2 (1-44)||(25882864-25882907)
chr2 (166-220)||(25883040-25883094)
chr2 (1-39)||(28609174-28609212)
chr2 (5-44)||(1513527-1513566)
chr2 (1-44)||(6931367-6931410)
chr2 (1-44)||(10875167-10875210)
chr2 (1-44)||(19484946-19484989)
chr2 (1-44)||(42781914-42781957)
chr2 (5-39)||(19487513-19487547)
chr2 (166-220)||(25236237-25236290)
chr2 (1-39)||(25883359-25883397)
chr2 (160-212)||(1514234-1514286)
[»] scaffold0210 (4 HSPs)
scaffold0210 (126-220)||(17524-17618)
scaffold0210 (136-220)||(17366-17450)
scaffold0210 (1-44)||(17407-17450)
scaffold0210 (1-44)||(17575-17618)
[»] chr1 (65 HSPs)
chr1 (143-220)||(50290040-50290117)
chr1 (126-220)||(39268558-39268651)
chr1 (160-220)||(1827683-1827743)
chr1 (160-220)||(4892673-4892733)
chr1 (160-220)||(5426932-5426992)
chr1 (160-220)||(5427554-5427614)
chr1 (160-220)||(16301521-16301581)
chr1 (160-220)||(19321053-19321113)
chr1 (160-220)||(22198000-22198060)
chr1 (160-220)||(28572381-28572441)
chr1 (160-220)||(29185754-29185814)
chr1 (160-220)||(33074751-33074811)
chr1 (160-220)||(33362276-33362336)
chr1 (160-220)||(38896053-38896113)
chr1 (160-220)||(45914324-45914384)
chr1 (160-220)||(46624115-46624175)
chr1 (160-220)||(52311417-52311477)
chr1 (177-239)||(8998523-8998585)
chr1 (162-220)||(50278162-50278220)
chr1 (160-212)||(1827065-1827117)
chr1 (160-220)||(16300999-16301059)
chr1 (160-212)||(28571013-28571065)
chr1 (160-212)||(33075383-33075435)
chr1 (126-220)||(39268658-39268752)
chr1 (181-239)||(49193441-49193499)
chr1 (162-220)||(50289830-50289888)
chr1 (160-213)||(43991497-43991550)
chr1 (160-212)||(22198632-22198684)
chr1 (160-220)||(28571638-28571698)
chr1 (160-220)||(28947266-28947326)
chr1 (160-220)||(47137096-47137156)
chr1 (1-44)||(16301521-16301564)
chr1 (126-191)||(50562717-50562782)
chr1 (160-212)||(4892048-4892100)
chr1 (160-212)||(29186387-29186439)
chr1 (160-212)||(33361651-33361703)
chr1 (1-37)||(43991514-43991550)
chr1 (160-212)||(50562012-50562064)
chr1 (160-220)||(50562636-50562696)
chr1 (160-212)||(51965094-51965146)
chr1 (1-44)||(1827683-1827726)
chr1 (1-44)||(4892673-4892716)
chr1 (1-44)||(5427554-5427597)
chr1 (1-44)||(19321070-19321113)
chr1 (1-44)||(22198017-22198060)
chr1 (1-44)||(28572381-28572424)
chr1 (1-44)||(29185771-29185814)
chr1 (1-44)||(33074768-33074811)
chr1 (1-44)||(33362276-33362319)
chr1 (1-44)||(38896053-38896096)
chr1 (1-44)||(45914324-45914367)
chr1 (1-44)||(47137096-47137139)
chr1 (1-44)||(50278177-50278220)
chr1 (1-44)||(50290074-50290117)
chr1 (1-44)||(52311417-52311460)
chr1 (166-220)||(21008029-21008083)
chr1 (1-63)||(49193441-49193503)
chr1 (160-212)||(52310799-52310851)
chr1 (1-44)||(5426932-5426975)
chr1 (5-44)||(39268558-39268597)
chr1 (5-44)||(46624136-46624175)
chr1 (1-44)||(50289845-50289888)
chr1 (5-63)||(8998527-8998585)
chr1 (171-213)||(32575586-32575628)
chr1 (6-44)||(39268658-39268696)
[»] chr3 (51 HSPs)
chr3 (160-220)||(35856132-35856192)
chr3 (160-220)||(9764582-9764642)
chr3 (149-213)||(13495559-13495623)
chr3 (160-220)||(26777178-26777238)
chr3 (126-213)||(11586017-11586104)
chr3 (160-215)||(29529494-29529549)
chr3 (160-220)||(9772817-9772877)
chr3 (160-220)||(55291137-55291197)
chr3 (161-220)||(19361992-19362051)
chr3 (161-220)||(19368072-19368131)
chr3 (166-220)||(8234915-8234969)
chr3 (166-220)||(11585887-11585941)
chr3 (143-205)||(38362618-38362680)
chr3 (160-205)||(18684904-18684949)
chr3 (159-212)||(35855507-35855560)
chr3 (161-222)||(46488361-46488422)
chr3 (160-220)||(4138033-4138093)
chr3 (160-212)||(8396001-8396053)
chr3 (160-220)||(19361367-19361427)
chr3 (160-212)||(39093282-39093334)
chr3 (160-220)||(51656813-51656873)
chr3 (160-212)||(52842543-52842595)
chr3 (160-212)||(55294027-55294079)
chr3 (166-220)||(39093791-39093845)
chr3 (160-220)||(5557609-5557669)
chr3 (160-220)||(26101412-26101472)
chr3 (143-210)||(46487498-46487563)
chr3 (1-44)||(8234926-8234969)
chr3 (1-44)||(9764582-9764625)
chr3 (1-44)||(11585898-11585941)
chr3 (161-220)||(46487714-46487773)
chr3 (166-220)||(8113466-8113520)
chr3 (1-39)||(29529511-29529549)
chr3 (1-37)||(11586068-11586104)
chr3 (1-37)||(13495587-13495623)
chr3 (4-44)||(39093791-39093831)
chr3 (160-212)||(40823917-40823968)
chr3 (160-212)||(48520286-48520338)
chr3 (165-220)||(9764710-9764764)
chr3 (1-44)||(9772817-9772860)
chr3 (1-44)||(19362008-19362051)
chr3 (1-44)||(19368088-19368131)
chr3 (5-44)||(35856132-35856171)
chr3 (1-44)||(46487714-46487757)
chr3 (1-44)||(55291154-55291197)
chr3 (150-220)||(3753377-3753446)
chr3 (166-220)||(11583327-11583381)
chr3 (9-46)||(46488361-46488398)
chr3 (4-44)||(8113466-8113506)
chr3 (160-220)||(8526809-8526868)
chr3 (165-220)||(11582422-11582478)
[»] scaffold0108 (2 HSPs)
scaffold0108 (143-220)||(13819-13896)
scaffold0108 (126-215)||(13992-14081)
[»] scaffold0079 (3 HSPs)
scaffold0079 (160-220)||(9341-9401)
scaffold0079 (160-212)||(9981-10033)
scaffold0079 (1-44)||(9358-9401)
[»] scaffold0057 (3 HSPs)
scaffold0057 (160-220)||(18034-18094)
scaffold0057 (160-212)||(18667-18719)
scaffold0057 (1-44)||(18051-18094)
[»] scaffold0115 (3 HSPs)
scaffold0115 (160-220)||(3361-3421)
scaffold0115 (160-220)||(3978-4043)
scaffold0115 (160-220)||(11718-11783)
[»] scaffold0051 (1 HSPs)
scaffold0051 (160-220)||(54908-54968)
[»] scaffold0009 (3 HSPs)
scaffold0009 (160-220)||(232546-232606)
scaffold0009 (160-212)||(231921-231973)
scaffold0009 (1-44)||(232546-232589)
[»] scaffold2127 (2 HSPs)
scaffold2127 (160-220)||(938-998)
scaffold2127 (1-44)||(938-981)
[»] scaffold0374 (1 HSPs)
scaffold0374 (126-213)||(2337-2425)
[»] scaffold0032 (4 HSPs)
scaffold0032 (160-212)||(4215-4267)
scaffold0032 (160-212)||(10664-10716)
scaffold0032 (1-44)||(3599-3642)
scaffold0032 (176-220)||(3598-3642)
[»] scaffold0381 (2 HSPs)
scaffold0381 (160-212)||(9833-9885)
scaffold0381 (160-220)||(10458-10518)
[»] scaffold0230 (1 HSPs)
scaffold0230 (160-200)||(27303-27343)
[»] scaffold0069 (1 HSPs)
scaffold0069 (160-212)||(13681-13733)
[»] scaffold0484 (2 HSPs)
scaffold0484 (171-220)||(8808-8857)
scaffold0484 (1-44)||(8814-8857)


Alignment Details
Target: chr8 (Bit Score: 104; Significance: 6e-52; HSPs: 74)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 9 - 241
Target Start/End: Complemental strand, 28528942 - 28528721
Alignment:
Q  9 cacacttttgcatttaatatttatctaaagttaaattatattcctaattttatgctannnnnnnagaaaggaattaccccgccctatattacgcccttta 108  Q
    |||||||||||||||||| |||| ||||||| ||||||| ||||| | |||||||||        |||||||||||||||||||||||||||            
T  28528942 cacacttttgcatttaatgtttacctaaagtcaaattatgttcctcactttatgctatttttttggaaaggaattaccccgccctatattac-------- 28528851  T
Q  109 ttactctactggcatct-cttataaagcttaacctgtctcgctatactaaacctaattttaacctaattttttcctccacacttttgcatttaatgttga 207  Q
        |||| |||||||| ||||||||||||||  |||||| ||||||||||| |||||||||| |||||||||||||||||||||||||||||||||| |    
T  28528850 ----tctattggcatctacttataaagcttaatatgtctcactatactaaacttaattttaacgtaattttttcctccacacttttgcatttaatgttta 28528755  T
Q  208 tctaaagtcaaattatgtttctaattttatgcta 241  Q
    ||||||||||||||||||| ||||||||||||||    
T  28528754 tctaaagtcaaattatgttcctaattttatgcta 28528721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 5 - 241
Target Start/End: Complemental strand, 28528781 - 28528556
Alignment:
Q  5 cctccacacttttgcatttaatatttatctaaagttaaattatattcctaattttatgctannnnnnnagaaaggaattaccccgccctatattacgccc 104  Q
    |||||||||||||||||||||| |||||||||||| ||||||| |||||||||||||||||        |||||||||||||| |||||||||||| |      
T  28528781 cctccacacttttgcatttaatgtttatctaaagtcaaattatgttcctaattttatgctatttttttggaaaggaattaccctgccctatattactcg- 28528683  T
Q  105 tttattactctactggcatctctta----taaagcttaacctgtctcgctatactaaacctaattttaacctaattttttcctccacacttttgcattta 200  Q
                 ||||||||||||    ||||||||||||||||||||||||||||| | |||||||||||||||||| ||||||||||||||||||||    
T  28528682 -------------tggcatctcttacttataaagcttaacctgtctcgctatactaaatcgaattttaacctaattttt-cctccacacttttgcattta 28528597  T
Q  201 atgttgatctaaagtcaaattatgtttctaattttatgcta 241  Q
    |||||  ||||||||||||||||||| ||||||||||||||    
T  28528596 atgtttctctaaagtcaaattatgttcctaattttatgcta 28528556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 100 - 269
Target Start/End: Complemental strand, 28527989 - 28527831
Alignment:
Q  100 cgccctttattactctactggcatctcttataaagcttaacctgtctcgctatactaaacctaattttaacctaattttttcctccacacttttgcattt 199  Q
    |||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||           ||||| |||||||||||||||    
T  28527989 cgccctatattactctactggcatctcttataaagcttaacatgtctcgctatactaaacctaatttt-----------ttccttcacacttttgcattt 28527901  T
Q  200 aatgttgatctaaagtcaaattatgtttctaattttatgctannnnnnnggaaatgaattaccccgccct 269  Q
    |||||| ||||||||||||||||||||| |||||||||||||       |||||||||||||||| ||||    
T  28527900 aatgtttatctaaagtcaaattatgtttataattttatgctatttttttggaaatgaattaccccaccct 28527831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 241
Target Start/End: Complemental strand, 28528247 - 28528015
Alignment:
Q  1 tttccctccacacttttgcatttaatatttatctaaagttaaattatattcctaattttatgctannnnnnna--gaaaggaattaccccgccctatatt 98  Q
    |||||||||||| ||||||||||||| |||||||| ||| |||||||||||||||||||||||||          ||||||||||||||||||||         
T  28528247 tttccctccacatttttgcatttaatgtttatctagagtcaaattatattcctaattttatgctatttttttttggaaaggaattaccccgccct----- 28528153  T
Q  99 acgccctttattactctactggcatctctta----taaagcttaacctgtctcgctatactaaa-cctaattttaacctaattttttcctccacactttt 193  Q
           ||||||||||   |||||||||||    ||||| ||||||||||| ||||||||||| |||||||||||| |||||||| ||| |||||||||    
T  28528152 -------ttattactct---ggcatctcttacttataaagtttaacctgtcttgctatactaaaacctaattttaacataatttttcccttcacactttt 28528063  T
Q  194 gcatttaatgttgatctaaagtcaaattatgtttctaattttatgcta 241  Q
    |||||||||||| |||| ||||||||||||||| |||||| |||||||    
T  28528062 gcatttaatgtttatctgaagtcaaattatgttcctaattctatgcta 28528015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 126 - 241
Target Start/End: Complemental strand, 28528298 - 28528183
Alignment:
Q  126 cttataaagcttaacctgtctcgctatactaaacctaattttaacctaattttttcctccacacttttgcatttaatgttgatctaaagtcaaattatgt 225  Q
    ||||||||| ||||| ||||||||||||||||||||||||||||| |||||||| |||||||| |||||||||||||||| ||||| ||||||||||| |    
T  28528298 cttataaagtttaacttgtctcgctatactaaacctaattttaacataatttttccctccacatttttgcatttaatgtttatctagagtcaaattatat 28528199  T
Q  226 ttctaattttatgcta 241  Q
    | ||||||||||||||    
T  28528198 tcctaattttatgcta 28528183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 126 - 269
Target Start/End: Complemental strand, 28529001 - 28528858
Alignment:
Q  126 cttataaagcttaacctgtctcgctatactaaacctaattttaacctaattttttcctccacacttttgcatttaatgttgatctaaagtcaaattatgt 225  Q
    ||||||||| ||||||||||||| ||||||||| ||||||||||| |||||||||||| ||||||||||||||||||||| | |||||||||||||||||    
T  28529001 cttataaagtttaacctgtctcgttatactaaatctaattttaacataattttttccttcacacttttgcatttaatgtttacctaaagtcaaattatgt 28528902  T
Q  226 ttctaattttatgctannnnnnnggaaatgaattaccccgccct 269  Q
    | || | |||||||||       ||||| |||||||||||||||    
T  28528901 tcctcactttatgctatttttttggaaaggaattaccccgccct 28528858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 9 - 237
Target Start/End: Complemental strand, 28527915 - 28527696
Alignment:
Q  9 cacacttttgcatttaatatttatctaaagttaaattatattcctaattttatgctannnnnnnagaaaggaattaccccgccctatattacgcccttta 108  Q
    |||||||||||||||||| |||||||||||| ||||||| ||  |||||||||||||        |||| |||||||||| |||||||||||            
T  28527915 cacacttttgcatttaatgtttatctaaagtcaaattatgtttataattttatgctatttttttggaaatgaattaccccaccctatattac-------- 28527824  T
Q  109 ttactctactggcatctct---tataaagcttaacctgtctcgctatactaaacctaattttaacctaattttttcctccacacttttgcatttaatgtt 205  Q
        | |||||||||||||   ||||||| ||||| ||||| |||||||||||| |||||||||| ||||||||  ||||||||||||| ||||||||||    
T  28527823 ----tttactggcatctctacttataaagtttaacatgtcttgctatactaaacttaattttaacgtaatttttctctccacacttttgtatttaatgtt 28527728  T
Q  206 gatctaaagtcaaattatgtttctaattttat 237  Q
     ||||||||| |||||||||| ||||||||||    
T  28527727 tatctaaagttaaattatgttcctaattttat 28527696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 5 - 241
Target Start/End: Complemental strand, 28528616 - 28528381
Alignment:
Q  5 cctccacacttttgcatttaatatttatctaaagttaaattatattcctaattttatgctannnnnnnagaaaggaattaccccgccctatattacgccc 104  Q
    |||||||||||||||||||||| ||| |||||||| ||||||| |||||||||||||||||        || ||||||||||| |||||               
T  28528616 cctccacacttttgcatttaatgtttctctaaagtcaaattatgttcctaattttatgctatttttttggataggaattacccggccct----------- 28528528  T
Q  105 tttattactctactggcatctctta----------ta-aagcttaacctgtctcgctatactaaacctaattttaacctaattttttcctccacactttt 193  Q
     ||||||||||| ||||||||||||          || ||| ||||| ||||| ||||||||||||||||||||||| ||||| || ||| |||||||||    
T  28528527 -ttattactctattggcatctcttacttataaaggtataagtttaacatgtctagctatactaaacctaattttaacataattcttcccttcacactttt 28528429  T
Q  194 gcatttaatgttgatctaaagtcaaattatgtttctaattttatgcta 241  Q
    |||||||||||| |||||||||||||||||||| |||||| |||||||    
T  28528428 gcatttaatgtttatctaaagtcaaattatgttcctaattctatgcta 28528381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 160 - 220
Target Start/End: Complemental strand, 1944484 - 1944424
Alignment:
Q  160 ctaattttaacctaattttttcctccacacttttgcatttaatgttgatctaaagtcaaat 220  Q
    |||||||||||||||||||| ||||||||||||||||||||||||| ||||||||| ||||    
T  1944484 ctaattttaacctaatttttccctccacacttttgcatttaatgtttatctaaagtaaaat 1944424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 160 - 220
Target Start/End: Original strand, 4465097 - 4465157
Alignment:
Q  160 ctaattttaacctaattttttcctccacacttttgcatttaatgttgatctaaagtcaaat 220  Q
    |||||||||||||||||||| ||||||||||||||||||||||||| ||||||||| ||||    
T  4465097 ctaattttaacctaatttttccctccacacttttgcatttaatgtttatctaaagtaaaat 4465157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 160 - 220
Target Start/End: Original strand, 4465731 - 4465791
Alignment:
Q  160 ctaattttaacctaattttttcctccacacttttgcatttaatgttgatctaaagtcaaat 220  Q
    |||||||||||||||||||| ||||||||||||| ||||||||||| ||||||||||||||    
T  4465731 ctaattttaacctaatttttccctccacacttttacatttaatgtttatctaaagtcaaat 4465791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 160 - 220
Target Start/End: Original strand, 8161164 - 8161224
Alignment:
Q  160 ctaattttaacctaattttttcctccacacttttgcatttaatgttgatctaaagtcaaat 220  Q
    |||||||||||||||||||| ||||||||||||||||||||||||| ||||||||| ||||    
T  8161164 ctaattttaacctaatttttccctccacacttttgcatttaatgtttatctaaagtaaaat 8161224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 160 - 220
Target Start/End: Complemental strand, 8762308 - 8762248
Alignment:
Q  160 ctaattttaacctaattttttcctccacacttttgcatttaatgttgatctaaagtcaaat 220  Q
    |||||||||||||||||||| ||||||||||||||||||||||||| ||||||||| ||||    
T  8762308 ctaattttaacctaatttttccctccacacttttgcatttaatgtttatctaaagtaaaat 8762248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 160 - 220
Target Start/End: Complemental strand, 9473532 - 9473472
Alignment:
Q  160 ctaattttaacctaattttttcctccacacttttgcatttaatgttgatctaaagtcaaat 220  Q
    |||||||||||||||||||| ||||||||||||||||||||||||| ||||||||| ||||    
T  9473532 ctaattttaacctaatttttccctccacacttttgcatttaatgtttatctaaagtaaaat 9473472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 160 - 220
Target Start/End: Original strand, 25834744 - 25834804
Alignment:
Q  160 ctaattttaacctaattttttcctccacacttttgcatttaatgttgatctaaagtcaaat 220  Q
    |||||||||||||||||||| ||||||||||||||||||||||||| ||||||||| ||||    
T  25834744 ctaattttaacctaatttttccctccacacttttgcatttaatgtttatctaaagtaaaat 25834804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 144 - 220
Target Start/End: Complemental strand, 27854151 - 27854075
Alignment:
Q  144 tctcgctatactaaacctaattttaacctaattttttcctccacacttttgcatttaatgttgatctaaagtcaaat 220  Q
    ||||| |||||| |||||||||||||| |||||||| ||||||||| ||||||||||||||| ||||||||| ||||    
T  27854151 tctcgttatacttaacctaattttaacttaatttttccctccacacctttgcatttaatgtttatctaaagtaaaat 27854075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 160 - 220
Target Start/End: Complemental strand, 32845871 - 32845811
Alignment:
Q  160 ctaattttaacctaattttttcctccacacttttgcatttaatgttgatctaaagtcaaat 220  Q
    |||||||||||||||| ||||||||||||||||||||||||||||| ||||||||| ||||    
T  32845871 ctaattttaacctaatcttttcctccacacttttgcatttaatgtttatctaaagtaaaat 32845811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 160 - 220
Target Start/End: Complemental strand, 36777888 - 36777828
Alignment:
Q  160 ctaattttaacctaattttttcctccacacttttgcatttaatgttgatctaaagtcaaat 220  Q
    |||||||||||||||||||| ||||||||||||||||||||||||| ||||||||| ||||    
T  36777888 ctaattttaacctaatttttccctccacacttttgcatttaatgtttatctaaagtaaaat 36777828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 160 - 220
Target Start/End: Complemental strand, 41157944 - 41157884
Alignment:
Q  160 ctaattttaacctaattttttcctccacacttttgcatttaatgttgatctaaagtcaaat 220  Q
    |||||||||||||||||||| ||||||||||||||||||||||||| ||||||||| ||||    
T  41157944 ctaattttaacctaatttttccctccacacttttgcatttaatgtttatctaaagtaaaat 41157884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 160 - 220
Target Start/End: Original strand, 41532460 - 41532520
Alignment:
Q  160 ctaattttaacctaattttttcctccacacttttgcatttaatgttgatctaaagtcaaat 220  Q
    |||||||||||||||||||||||| ||||||||||||||||||||| ||||||||| ||||    
T  41532460 ctaattttaacctaattttttccttcacacttttgcatttaatgtttatctaaagtaaaat 41532520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 28527756 - 28527655
Alignment:
Q  1 tttccctccacacttttgcatttaatatttatctaaagttaaattatattcctaattt--tatgctannnnnnnagaaaggaattaccccgccctatatt 98  Q
    |||| ||||||||||||| ||||||| |||||||||||||||||||| ||||||||||  |||||||        ||||||||||||||||| |||||||    
T  28527756 tttctctccacacttttgtatttaatgtttatctaaagttaaattatgttcctaattttatatgctatttttttggaaaggaattaccccgctctatatt 28527657  T
Q  99 ac 100  Q
    ||    
T  28527656 ac 28527655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 2 - 152
Target Start/End: Complemental strand, 28528444 - 28528305
Alignment:
Q  2 ttccctccacacttttgcatttaatatttatctaaagttaaattatattcctaattttatgcta-nnnnnnnagaaaggaattaccccgccctatattac 100  Q
    |||||| |||||||||||||||||| |||||||||||| ||||||| ||||||||| |||||||         ||||||||||| |||||||||          
T  28528444 ttcccttcacacttttgcatttaatgtttatctaaagtcaaattatgttcctaattctatgctattttttttggaaaggaattatcccgcccta------ 28528351  T
Q  101 gccctttattactctactggcatctcttataaagcttaacctgtctcgctat 152  Q
          |||||||||||| ||||||||||||||| |||||||||||||||||    
T  28528350 ------tattactctactagcatctcttataaagtttaacctgtctcgctat 28528305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 160 - 220
Target Start/End: Complemental strand, 1943741 - 1943681
Alignment:
Q  160 ctaattttaacctaattttttcctccacacttttgcatttaatgttgatctaaagtcaaat 220  Q
    |||||||||||||||||||| | ||||||||||||||||||||||| ||||||||| ||||    
T  1943741 ctaattttaacctaatttttccatccacacttttgcatttaatgtttatctaaagtaaaat 1943681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 160 - 212
Target Start/End: Complemental strand, 8761043 - 8760991
Alignment:
Q  160 ctaattttaacctaattttttcctccacacttttgcatttaatgttgatctaa 212  Q
    |||||||||||||||||||||||||||||||||| ||||||||||| ||||||    
T  8761043 ctaattttaacctaattttttcctccacacttttacatttaatgtttatctaa 8760991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 160 - 220
Target Start/End: Complemental strand, 8761676 - 8761616
Alignment:
Q  160 ctaattttaacctaattttttcctccacacttttgcatttaatgttgatctaaagtcaaat 220  Q
    |||||||||||||||||||| | ||||||||||||||||||||||| ||||||||| ||||    
T  8761676 ctaattttaacctaatttttccatccacacttttgcatttaatgtttatctaaagtaaaat 8761616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 160 - 220
Target Start/End: Complemental strand, 25345293 - 25345233
Alignment:
Q  160 ctaattttaacctaattttttcctccacacttttgcatttaatgttgatctaaagtcaaat 220  Q
    |||||||||||||||||||| ||||||||||||| ||||||||||| |||||| |||||||    
T  25345293 ctaattttaacctaatttttccctccacacttttacatttaatgtttatctaaggtcaaat 25345233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 160 - 220
Target Start/End: Original strand, 25620040 - 25620100
Alignment:
Q  160 ctaattttaacctaattttttcctccacacttttgcatttaatgttgatctaaagtcaaat 220  Q
    |||||||||||||||||||| ||||||||||||| ||||||||||| |||||| |||||||    
T  25620040 ctaattttaacctaatttttccctccacacttttacatttaatgtttatctaaggtcaaat 25620100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 160 - 220
Target Start/End: Original strand, 25835376 - 25835436
Alignment:
Q  160 ctaattttaacctaattttttcctccacacttttgcatttaatgttgatctaaagtcaaat 220  Q
    |||||||||||||||||||| | ||||||||||||||||||||||| ||||||||| ||||    
T  25835376 ctaattttaacctaatttttccatccacacttttgcatttaatgtttatctaaagtaaaat 25835436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 160 - 212
Target Start/End: Original strand, 25836009 - 25836061
Alignment:
Q  160 ctaattttaacctaattttttcctccacacttttgcatttaatgttgatctaa 212  Q
    |||||||||||||||||||||||||||||||||| ||||||||||| ||||||    
T  25836009 ctaattttaacctaattttttcctccacacttttacatttaatgtttatctaa 25836061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 160 - 212
Target Start/End: Complemental strand, 32844493 - 32844441
Alignment:
Q  160 ctaattttaacctaattttttcctccacacttttgcatttaatgttgatctaa 212  Q
    |||||||||||||||||||||||||||||||||| ||||||||||| ||||||    
T  32844493 ctaattttaacctaattttttcctccacacttttacatttaatgtttatctaa 32844441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 160 - 220
Target Start/End: Complemental strand, 32845128 - 32845068
Alignment:
Q  160 ctaattttaacctaattttttcctccacacttttgcatttaatgttgatctaaagtcaaat 220  Q
    |||||||||||||||||||| | ||||||||||||||||||||||| ||||||||| ||||    
T  32845128 ctaattttaacctaatttttccatccacacttttgcatttaatgtttatctaaagtaaaat 32845068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 160 - 220
Target Start/End: Original strand, 44381413 - 44381473
Alignment:
Q  160 ctaattttaacctaattttttcctccacacttttgcatttaatgttgatctaaagtcaaat 220  Q
    |||||||||||||||||||| ||||||||||||| ||||||||||| ||||||||| ||||    
T  44381413 ctaattttaacctaatttttccctccacacttttacatttaatgtttatctaaagtaaaat 44381473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 160 - 211
Target Start/End: Complemental strand, 1943108 - 1943057
Alignment:
Q  160 ctaattttaacctaattttttcctccacacttttgcatttaatgttgatcta 211  Q
    |||||||||||||||||||||||||||||||||| ||||||||||| |||||    
T  1943108 ctaattttaacctaattttttcctccacacttttacatttaatgtttatcta 1943057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 161 - 220
Target Start/End: Complemental strand, 7390615 - 7390556
Alignment:
Q  161 taattttaacctaattttttcctccacacttttgcatttaatgttgatctaaagtcaaat 220  Q
    ||||||||||||||||||| |||||||||||||| |||||||||| ||||||||| ||||    
T  7390615 taattttaacctaatttttccctccacacttttgtatttaatgtttatctaaagtaaaat 7390556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 126 - 239
Target Start/End: Complemental strand, 45262391 - 45262268
Alignment:
Q  126 cttataaagcttaacctgtctcgctatactaaacctaattttaacctaatt-----------ttttcctccacacttttgcatttaatgttgatctaaag 214  Q
    |||||||| ||||||| ||||||| | | ||||||||||||||||||||||           ||| ||||||||||||||||||||||||| | ||| ||    
T  45262391 cttataaatcttaacccgtctcgcaaaattaaacctaattttaacctaattctctcgcctaatttccctccacacttttgcatttaatgttta-ctacag 45262293  T
Q  215 tcaaattatgtttctaattttatgc 239  Q
    |||||||||||||||||||| ||||    
T  45262292 tcaaattatgtttctaatttcatgc 45262268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 160 - 220
Target Start/End: Original strand, 8161888 - 8161948
Alignment:
Q  160 ctaattttaacctaattttttcctccacacttttgcatttaatgttgatctaaagtcaaat 220  Q
    |||||||||||||||||||| | ||||||||| ||||||||||||| ||||||||| ||||    
T  8161888 ctaattttaacctaatttttccatccacacttctgcatttaatgtttatctaaagtaaaat 8161948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 160 - 212
Target Start/End: Original strand, 8162521 - 8162573
Alignment:
Q  160 ctaattttaacctaattttttcctccacacttttgcatttaatgttgatctaa 212  Q
    |||||||||||||||| ||||||||||||||||| ||||||||||| ||||||    
T  8162521 ctaattttaacctaatattttcctccacacttttacatttaatgtttatctaa 8162573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 160 - 220
Target Start/End: Complemental strand, 12761532 - 12761472
Alignment:
Q  160 ctaattttaacctaattttttcctccacacttttgcatttaatgttgatctaaagtcaaat 220  Q
    ||||||||||||||||||||  ||| |||||||||||||||||||| ||||||||| ||||    
T  12761532 ctaattttaacctaatttttcgctctacacttttgcatttaatgtttatctaaagtaaaat 12761472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 160 - 212
Target Start/End: Original strand, 24250447 - 24250499
Alignment:
Q  160 ctaattttaacctaattttttcctccacacttttgcatttaatgttgatctaa 212  Q
    |||||||||| ||||||||| ||||||||||||||||||||||||| ||||||    
T  24250447 ctaattttaatctaatttttccctccacacttttgcatttaatgtttatctaa 24250499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 160 - 220
Target Start/End: Original strand, 24254791 - 24254850
Alignment:
Q  160 ctaattttaacctaattttttcctccacacttttgcatttaatgttgatctaaagtcaaat 220  Q
    |||||||||||||||||||| ||||| ||||||||||||||||||| ||||||||| ||||    
T  24254791 ctaattttaacctaattttt-cctcctcacttttgcatttaatgtttatctaaagtaaaat 24254850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 160 - 220
Target Start/End: Original strand, 25615767 - 25615827
Alignment:
Q  160 ctaattttaacctaattttttcctccacacttttgcatttaatgttgatctaaagtcaaat 220  Q
    |||||||||||||| ||||| ||||||||||||| ||||||||||| |||||| |||||||    
T  25615767 ctaattttaacctagtttttccctccacacttttacatttaatgtttatctaaggtcaaat 25615827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 160 - 220
Target Start/End: Original strand, 25619403 - 25619463
Alignment:
Q  160 ctaattttaacctaattttttcctccacacttttgcatttaatgttgatctaaagtcaaat 220  Q
    |||||||||||||||||||| |||||||| |||||||||||||||| ||||| ||| ||||    
T  25619403 ctaattttaacctaatttttccctccacaattttgcatttaatgtttatctagagtaaaat 25619463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 160 - 220
Target Start/End: Complemental strand, 32846504 - 32846444
Alignment:
Q  160 ctaattttaacctaattttttcctccacacttttgcatttaatgttgatctaaagtcaaat 220  Q
    |||||||||||||||||||| ||||||||||||| |||||||| || ||||||||| ||||    
T  32846504 ctaattttaacctaatttttccctccacactttttcatttaatatttatctaaagtaaaat 32846444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 160 - 220
Target Start/End: Complemental strand, 34893397 - 34893337
Alignment:
Q  160 ctaattttaacctaattttttcctccacacttttgcatttaatgttgatctaaagtcaaat 220  Q
    |||||||||||||||||||| |||| |||||||||||||||||||| || |||||| ||||    
T  34893397 ctaattttaacctaatttttccctctacacttttgcatttaatgtttatttaaagtaaaat 34893337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 160 - 212
Target Start/End: Complemental strand, 41157322 - 41157270
Alignment:
Q  160 ctaattttaacctaattttttcctccacacttttgcatttaatgttgatctaa 212  Q
    |||||||||||||||||||| ||||||||||||| ||||||||||| ||||||    
T  41157322 ctaattttaacctaatttttccctccacacttttacatttaatgtttatctaa 41157270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 160 - 212
Target Start/End: Original strand, 41533093 - 41533145
Alignment:
Q  160 ctaattttaacctaattttttcctccacacttttgcatttaatgttgatctaa 212  Q
    |||||||||||||||||||| ||||||||||||| ||||||||||| ||||||    
T  41533093 ctaattttaacctaatttttccctccacacttttacatttaatgtttatctaa 41533145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 160 - 212
Target Start/End: Complemental strand, 41978254 - 41978202
Alignment:
Q  160 ctaattttaacctaattttttcctccacacttttgcatttaatgttgatctaa 212  Q
    ||||||||||||||||||||||||||| |||||| ||||||||||| ||||||    
T  41978254 ctaattttaacctaattttttcctccatacttttacatttaatgtttatctaa 41978202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 160 - 212
Target Start/End: Original strand, 44382034 - 44382086
Alignment:
Q  160 ctaattttaacctaattttttcctccacacttttgcatttaatgttgatctaa 212  Q
    |||||||||||||||||||| ||||||||||||| ||||||||||| ||||||    
T  44382034 ctaattttaacctaatttttccctccacacttttacatttaatgtttatctaa 44382086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 160 - 220
Target Start/End: Complemental strand, 7389980 - 7389920
Alignment:
Q  160 ctaattttaacctaattttttcctccacacttttgcatttaatgttgatctaaagtcaaat 220  Q
    |||||||||||||||||||| |||||||||| || ||||||||||  |||||| |||||||    
T  7389980 ctaattttaacctaatttttccctccacactcttacatttaatgtgtatctaaggtcaaat 7389920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 1944467 - 1944424
Alignment:
Q  1 tttccctccacacttttgcatttaatatttatctaaagttaaat 44  Q
    |||||||||||||||||||||||||| |||||||||||| ||||    
T  1944467 tttccctccacacttttgcatttaatgtttatctaaagtaaaat 1944424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 4465114 - 4465157
Alignment:
Q  1 tttccctccacacttttgcatttaatatttatctaaagttaaat 44  Q
    |||||||||||||||||||||||||| |||||||||||| ||||    
T  4465114 tttccctccacacttttgcatttaatgtttatctaaagtaaaat 4465157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 8161181 - 8161224
Alignment:
Q  1 tttccctccacacttttgcatttaatatttatctaaagttaaat 44  Q
    |||||||||||||||||||||||||| |||||||||||| ||||    
T  8161181 tttccctccacacttttgcatttaatgtttatctaaagtaaaat 8161224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 8762291 - 8762248
Alignment:
Q  1 tttccctccacacttttgcatttaatatttatctaaagttaaat 44  Q
    |||||||||||||||||||||||||| |||||||||||| ||||    
T  8762291 tttccctccacacttttgcatttaatgtttatctaaagtaaaat 8762248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 9473515 - 9473472
Alignment:
Q  1 tttccctccacacttttgcatttaatatttatctaaagttaaat 44  Q
    |||||||||||||||||||||||||| |||||||||||| ||||    
T  9473515 tttccctccacacttttgcatttaatgtttatctaaagtaaaat 9473472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 165 - 232
Target Start/End: Complemental strand, 25630093 - 25630026
Alignment:
Q  165 tttaacctaattttttcctccacacttttgcatttaatgttgatctaaagtcaaattatgtttctaat 232  Q
    ||||| ||||||||| |||||||||| |||||||||| |||  |||||||||||||||| || |||||    
T  25630093 tttaatctaatttttccctccacactattgcatttaaagtttttctaaagtcaaattatcttcctaat 25630026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 25834761 - 25834804
Alignment:
Q  1 tttccctccacacttttgcatttaatatttatctaaagttaaat 44  Q
    |||||||||||||||||||||||||| |||||||||||| ||||    
T  25834761 tttccctccacacttttgcatttaatgtttatctaaagtaaaat 25834804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 32846487 - 32846444
Alignment:
Q  1 tttccctccacacttttgcatttaatatttatctaaagttaaat 44  Q
    ||||||||||||||||| ||||||||||||||||||||| ||||    
T  32846487 tttccctccacactttttcatttaatatttatctaaagtaaaat 32846444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 36777871 - 36777828
Alignment:
Q  1 tttccctccacacttttgcatttaatatttatctaaagttaaat 44  Q
    |||||||||||||||||||||||||| |||||||||||| ||||    
T  36777871 tttccctccacacttttgcatttaatgtttatctaaagtaaaat 36777828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 41157927 - 41157884
Alignment:
Q  1 tttccctccacacttttgcatttaatatttatctaaagttaaat 44  Q
    |||||||||||||||||||||||||| |||||||||||| ||||    
T  41157927 tttccctccacacttttgcatttaatgtttatctaaagtaaaat 41157884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 166 - 220
Target Start/End: Complemental strand, 15096945 - 15096891
Alignment:
Q  166 ttaacctaattttttcctccacacttttgcatttaatgttgatctaaagtcaaat 220  Q
    ||||||||||||||  ||| |||||||||||||||||||| ||||||||| ||||    
T  15096945 ttaacctaatttttctctctacacttttgcatttaatgtttatctaaagtaaaat 15096891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 165 - 239
Target Start/End: Complemental strand, 25629886 - 25629815
Alignment:
Q  165 tttaacctaattttttcctccacacttttgcatttaatgttgatctaaagtcaaattatgtttctaattttatgc 239  Q
    ||||||||||||||| ||   ||||| |||||||||| ||| ||||||||||||||||| || ||||| ||||||    
T  25629886 tttaacctaatttttccc---acactattgcatttaaagtttatctaaagtcaaattatcttcctaatgttatgc 25629815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 1943724 - 1943681
Alignment:
Q  1 tttccctccacacttttgcatttaatatttatctaaagttaaat 44  Q
    ||||| |||||||||||||||||||| |||||||||||| ||||    
T  1943724 tttccatccacacttttgcatttaatgtttatctaaagtaaaat 1943681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 4465748 - 4465791
Alignment:
Q  1 tttccctccacacttttgcatttaatatttatctaaagttaaat 44  Q
    ||||||||||||||||| |||||||| |||||||||||| ||||    
T  4465748 tttccctccacacttttacatttaatgtttatctaaagtcaaat 4465791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 7390599 - 7390556
Alignment:
Q  1 tttccctccacacttttgcatttaatatttatctaaagttaaat 44  Q
    |||||||||||||||||| ||||||| |||||||||||| ||||    
T  7390599 tttccctccacacttttgtatttaatgtttatctaaagtaaaat 7390556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 8761659 - 8761616
Alignment:
Q  1 tttccctccacacttttgcatttaatatttatctaaagttaaat 44  Q
    ||||| |||||||||||||||||||| |||||||||||| ||||    
T  8761659 tttccatccacacttttgcatttaatgtttatctaaagtaaaat 8761616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 36
Target Start/End: Original strand, 24250464 - 24250499
Alignment:
Q  1 tttccctccacacttttgcatttaatatttatctaa 36  Q
    |||||||||||||||||||||||||| |||||||||    
T  24250464 tttccctccacacttttgcatttaatgtttatctaa 24250499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 8 - 63
Target Start/End: Complemental strand, 25629870 - 25629815
Alignment:
Q  8 ccacacttttgcatttaatatttatctaaagttaaattatattcctaattttatgc 63  Q
    ||||||| ||||||||||  |||||||||||| ||||||| |||||||| ||||||    
T  25629870 ccacactattgcatttaaagtttatctaaagtcaaattatcttcctaatgttatgc 25629815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 25630081 - 25630026
Alignment:
Q  1 tttccctccacacttttgcatttaatatttatctaaagttaaattatattcctaat 56  Q
    |||||||||||||| ||||||||||  ||| |||||||| ||||||| ||||||||    
T  25630081 tttccctccacactattgcatttaaagtttttctaaagtcaaattatcttcctaat 25630026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 25835393 - 25835436
Alignment:
Q  1 tttccctccacacttttgcatttaatatttatctaaagttaaat 44  Q
    ||||| |||||||||||||||||||| |||||||||||| ||||    
T  25835393 tttccatccacacttttgcatttaatgtttatctaaagtaaaat 25835436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #70
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 27854118 - 27854075
Alignment:
Q  1 tttccctccacacttttgcatttaatatttatctaaagttaaat 44  Q
    ||||||||||||| |||||||||||| |||||||||||| ||||    
T  27854118 tttccctccacacctttgcatttaatgtttatctaaagtaaaat 27854075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #71
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 32845111 - 32845068
Alignment:
Q  1 tttccctccacacttttgcatttaatatttatctaaagttaaat 44  Q
    ||||| |||||||||||||||||||| |||||||||||| ||||    
T  32845111 tttccatccacacttttgcatttaatgtttatctaaagtaaaat 32845068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #72
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 5 - 44
Target Start/End: Complemental strand, 32845850 - 32845811
Alignment:
Q  5 cctccacacttttgcatttaatatttatctaaagttaaat 44  Q
    |||||||||||||||||||||| |||||||||||| ||||    
T  32845850 cctccacacttttgcatttaatgtttatctaaagtaaaat 32845811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #73
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 44381430 - 44381473
Alignment:
Q  1 tttccctccacacttttgcatttaatatttatctaaagttaaat 44  Q
    ||||||||||||||||| |||||||| |||||||||||| ||||    
T  44381430 tttccctccacacttttacatttaatgtttatctaaagtaaaat 44381473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #74
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 45262329 - 45262268
Alignment:
Q  1 tttccctccacacttttgcatttaatatttatctaaagttaaattatattcctaattttatgc 63  Q
    |||||||||||||||||||||||||| |||| ||| ||| ||||||| || ||||||| ||||    
T  45262329 tttccctccacacttttgcatttaatgttta-ctacagtcaaattatgtttctaatttcatgc 45262268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 71; Significance: 3e-32; HSPs: 75)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 126 - 220
Target Start/End: Original strand, 40107665 - 40107759
Alignment:
Q  126 cttataaagcttaacctgtctcgctatactaaacctaattttaacctaattttttcctccacacttttgcatttaatgttgatctaaagtcaaat 220  Q
    ||||||||  |||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||    
T  40107665 cttataaatgttaatctgtctcgctatacttaacctaattttaacctaattttttcctccacacttttgcatttaatgtttatctaaagtaaaat 40107759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 126 - 220
Target Start/End: Original strand, 20077758 - 20077852
Alignment:
Q  126 cttataaagcttaacctgtctcgctatactaaacctaattttaacctaattttttcctccacacttttgcatttaatgttgatctaaagtcaaat 220  Q
    ||||||||  |||||| ||||||||||||| ||| ||||||||||||||||||||| ||||||||||||||||||||||  ||||||||| ||||    
T  20077758 cttataaatgttaacccgtctcgctatacttaacttaattttaacctaattttttcatccacacttttgcatttaatgtctatctaaagtaaaat 20077852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 143 - 220
Target Start/End: Original strand, 40241419 - 40241496
Alignment:
Q  143 gtctcgctatactaaacctaattttaacctaattttttcctccacacttttgcatttaatgttgatctaaagtcaaat 220  Q
    |||||||| |||| ||||||||||||||||||||||| |||||||||||||||||||||| || ||||||||| ||||    
T  40241419 gtctcgctgtacttaacctaattttaacctaatttttccctccacacttttgcatttaatattcatctaaagtaaaat 40241496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 160 - 220
Target Start/End: Original strand, 31897442 - 31897502
Alignment:
Q  160 ctaattttaacctaattttttcctccacacttttgcatttaatgttgatctaaagtcaaat 220  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||    
T  31897442 ctaattttaacctaattttttcctccacacttttgcatttaatgtttatctaaagtaaaat 31897502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 160 - 220
Target Start/End: Original strand, 36158460 - 36158520
Alignment:
Q  160 ctaattttaacctaattttttcctccacacttttgcatttaatgttgatctaaagtcaaat 220  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||    
T  36158460 ctaattttaacctaattttttcctccacacttttgcatttaatgtttatctaaagtaaaat 36158520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 126 - 240
Target Start/End: Original strand, 728543 - 728662
Alignment:
Q  126 cttataaagcttaacctgtctcgctatactaaacctaattttaacctaattttttcctccacacttttgcatttaatgttgatctaaag-----tcaaat 220  Q
    ||||||||  |||||  ||||||||||| | ||||||||||||||||||||||| | |||| |||||||||||||||||| ||||||||     | ||||    
T  728543 cttataaatgttaactcgtctcgctataattaacctaattttaacctaatttttccatccatacttttgcatttaatgtttatctaaagtaaaataaaat 728642  T
Q  221 tatgtttctaattttatgct 240  Q
    ||||||||||||| ||||||    
T  728643 tatgtttctaattatatgct 728662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 160 - 220
Target Start/End: Complemental strand, 9150939 - 9150879
Alignment:
Q  160 ctaattttaacctaattttttcctccacacttttgcatttaatgttgatctaaagtcaaat 220  Q
    |||||||||||||||||||| ||||||||||||||||||||||||| ||||||||| ||||    
T  9150939 ctaattttaacctaatttttccctccacacttttgcatttaatgtttatctaaagtaaaat 9150879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 160 - 220
Target Start/End: Complemental strand, 17171659 - 17171599
Alignment:
Q  160 ctaattttaacctaattttttcctccacacttttgcatttaatgttgatctaaagtcaaat 220  Q
    |||||||||||||||||||| ||||||||||||||||||||||||| ||||||||| ||||    
T  17171659 ctaattttaacctaatttttccctccacacttttgcatttaatgtttatctaaagtaaaat 17171599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 160 - 220
Target Start/End: Original strand, 24683037 - 24683097
Alignment:
Q  160 ctaattttaacctaattttttcctccacacttttgcatttaatgttgatctaaagtcaaat 220  Q
    |||||||||||||||||||| ||||||||||||||||||||||||| ||||||||| ||||    
T  24683037 ctaattttaacctaatttttccctccacacttttgcatttaatgtttatctaaagtaaaat 24683097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 160 - 220
Target Start/End: Original strand, 27733697 - 27733757
Alignment:
Q  160 ctaattttaacctaattttttcctccacacttttgcatttaatgttgatctaaagtcaaat 220  Q
    |||||||||||||||||||| ||||||||||||||||||||||||| ||||||||| ||||    
T  27733697 ctaattttaacctaatttttccctccacacttttgcatttaatgtttatctaaagtaaaat 27733757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 160 - 220
Target Start/End: Complemental strand, 29468740 - 29468680
Alignment:
Q  160 ctaattttaacctaattttttcctccacacttttgcatttaatgttgatctaaagtcaaat 220  Q
    |||||||||||||||||||| ||||||||||||||||||||||||| ||||||||| ||||    
T  29468740 ctaattttaacctaatttttccctccacacttttgcatttaatgtttatctaaagtaaaat 29468680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 160 - 220
Target Start/End: Original strand, 33637402 - 33637462
Alignment:
Q  160 ctaattttaacctaattttttcctccacacttttgcatttaatgttgatctaaagtcaaat 220  Q
    |||||||||||||||||||| ||||||||||||||||||||||||| ||||||||| ||||    
T  33637402 ctaattttaacctaatttttccctccacacttttgcatttaatgtttatctaaagtaaaat 33637462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 160 - 220
Target Start/End: Original strand, 49144777 - 49144837
Alignment:
Q  160 ctaattttaacctaattttttcctccacacttttgcatttaatgttgatctaaagtcaaat 220  Q
    |||||||||||||||||||| ||||||||||||||||||||||||| ||||||||| ||||    
T  49144777 ctaattttaacctaatttttccctccacacttttgcatttaatgtttatctaaagtaaaat 49144837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 160 - 220
Target Start/End: Complemental strand, 4849747 - 4849687
Alignment:
Q  160 ctaattttaacctaattttttcctccacacttttgcatttaatgttgatctaaagtcaaat 220  Q
    |||||||||||||||||||  ||||||||||||||||||||||||| ||||||||| ||||    
T  4849747 ctaattttaacctaattttaccctccacacttttgcatttaatgtttatctaaagtaaaat 4849687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 160 - 220
Target Start/End: Original strand, 7855714 - 7855774
Alignment:
Q  160 ctaattttaacctaattttttcctccacacttttgcatttaatgttgatctaaagtcaaat 220  Q
    |||||||||||||||||||| || |||||||||||||||||||||| ||||||||| ||||    
T  7855714 ctaattttaacctaatttttccccccacacttttgcatttaatgtttatctaaagtaaaat 7855774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 143 - 215
Target Start/End: Original strand, 12409292 - 12409363
Alignment:
Q  143 gtctcgctatactaaacctaattttaacctaattttttcctccacacttttgcatttaatgttgatctaaagt 215  Q
    |||| |||||||| ||| ||||||||| ||||||||||||||||||||||| ||||||||||| |||||||||    
T  12409292 gtcttgctatacttaac-taattttaatctaattttttcctccacacttttacatttaatgtttatctaaagt 12409363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 160 - 220
Target Start/End: Original strand, 20077436 - 20077496
Alignment:
Q  160 ctaattttaacctaattttttcctccacacttttgcatttaatgttgatctaaagtcaaat 220  Q
    |||||||||||||||||||| |||||||| |||||||||||||||| ||||||||| ||||    
T  20077436 ctaattttaacctaatttttccctccacaattttgcatttaatgtttatctaaagtaaaat 20077496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 160 - 220
Target Start/End: Original strand, 24683767 - 24683827
Alignment:
Q  160 ctaattttaacctaattttttcctccacacttttgcatttaatgttgatctaaagtcaaat 220  Q
    |||||||||||||||||||| | ||||||||||||||||||||||| ||||||||| ||||    
T  24683767 ctaattttaacctaatttttccatccacacttttgcatttaatgtttatctaaagtaaaat 24683827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 160 - 220
Target Start/End: Complemental strand, 34873111 - 34873051
Alignment:
Q  160 ctaattttaacctaattttttcctccacacttttgcatttaatgttgatctaaagtcaaat 220  Q
    |||||||||||||||||||| | ||||||||||||||||||||||| ||||||||| ||||    
T  34873111 ctaattttaacctaatttttccttccacacttttgcatttaatgtttatctaaagtaaaat 34873051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 160 - 220
Target Start/End: Original strand, 39648601 - 39648661
Alignment:
Q  160 ctaattttaacctaattttttcctccacacttttgcatttaatgttgatctaaagtcaaat 220  Q
    |||||||||||||||||||| |||||||||||||||||||||| || ||||||||| ||||    
T  39648601 ctaattttaacctaatttttccctccacacttttgcatttaatatttatctaaagtaaaat 39648661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 160 - 211
Target Start/End: Original strand, 24684400 - 24684451
Alignment:
Q  160 ctaattttaacctaattttttcctccacacttttgcatttaatgttgatcta 211  Q
    |||||||||||||||||||||||||||||||||| ||||||||||| |||||    
T  24684400 ctaattttaacctaattttttcctccacacttttacatttaatgtttatcta 24684451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 160 - 215
Target Start/End: Original strand, 32201102 - 32201157
Alignment:
Q  160 ctaattttaacctaattttttcctccacacttttgcatttaatgttgatctaaagt 215  Q
    |||||||| |||||||||||||| |||||||||||||||||||||| |||||||||    
T  32201102 ctaattttgacctaattttttccaccacacttttgcatttaatgtttatctaaagt 32201157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 160 - 215
Target Start/End: Original strand, 35156121 - 35156176
Alignment:
Q  160 ctaattttaacctaattttttcctccacacttttgcatttaatgttgatctaaagt 215  Q
    |||||||||||||||||||| ||| ||||||||||||||||||||| |||||||||    
T  35156121 ctaattttaacctaatttttcccttcacacttttgcatttaatgtttatctaaagt 35156176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 160 - 212
Target Start/End: Complemental strand, 690579 - 690527
Alignment:
Q  160 ctaattttaacctaattttttcctccacacttttgcatttaatgttgatctaa 212  Q
    |||||||||||||||||||| | ||||||||||||||||||||||| ||||||    
T  690579 ctaattttaacctaatttttccttccacacttttgcatttaatgtttatctaa 690527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 160 - 212
Target Start/End: Original strand, 27734301 - 27734353
Alignment:
Q  160 ctaattttaacctaattttttcctccacacttttgcatttaatgttgatctaa 212  Q
    |||||||||||||||||||| ||||||||||||| ||||||||||| ||||||    
T  27734301 ctaattttaacctaatttttccctccacacttttacatttaatgtttatctaa 27734353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 160 - 212
Target Start/End: Complemental strand, 29468108 - 29468056
Alignment:
Q  160 ctaattttaacctaattttttcctccacacttttgcatttaatgttgatctaa 212  Q
    ||||||||||||||||||||||||||||| |||| ||||||||||| ||||||    
T  29468108 ctaattttaacctaattttttcctccacatttttacatttaatgtttatctaa 29468056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 160 - 220
Target Start/End: Original strand, 49145542 - 49145602
Alignment:
Q  160 ctaattttaacctaattttttcctccacacttttgcatttaatgttgatctaaagtcaaat 220  Q
    ||||||||||||||||||||  |||||||||||| ||||||||||| |||||| |||||||    
T  49145542 ctaattttaacctaatttttcactccacacttttacatttaatgtttatctaaggtcaaat 49145602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 39648618 - 39648661
Alignment:
Q  1 tttccctccacacttttgcatttaatatttatctaaagttaaat 44  Q
    ||||||||||||||||||||||||||||||||||||||| ||||    
T  39648618 tttccctccacacttttgcatttaatatttatctaaagtaaaat 39648661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 39704227 - 39704184
Alignment:
Q  1 tttccctccacacttttgcatttaatatttatctaaagttaaat 44  Q
    ||||||||||||||||||||||||||||||||||||||| ||||    
T  39704227 tttccctccacacttttgcatttaatatttatctaaagtaaaat 39704184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 161 - 212
Target Start/End: Complemental strand, 44805876 - 44805825
Alignment:
Q  161 taattttaacctaattttttcctccacacttttgcatttaatgttgatctaa 212  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||| ||||||    
T  44805876 taattttaacctaatttttccctccacacttttacatttaatgtttatctaa 44805825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 166 - 204
Target Start/End: Original strand, 728498 - 728536
Alignment:
Q  166 ttaacctaattttttcctccacacttttgcatttaatgt 204  Q
    |||||||||||||||||||||||||||||||||||||||    
T  728498 ttaacctaattttttcctccacacttttgcatttaatgt 728536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 166 - 220
Target Start/End: Original strand, 12409563 - 12409616
Alignment:
Q  166 ttaacctaattttttcctccacacttttgcatttaatgttgatctaaagtcaaat 220  Q
    ||||||||||||| |||||||||||||||||||||||||| ||||||||| ||||    
T  12409563 ttaacctaatttt-tcctccacacttttgcatttaatgtttatctaaagtaaaat 12409616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 149 - 215
Target Start/End: Original strand, 38029344 - 38029410
Alignment:
Q  149 ctatactaaacctaattttaacctaattttttcctccacacttttgcatttaatgttgatctaaagt 215  Q
    ||||||| || ||||||||||||||||||||  ||||||||||||  |||||||||| |||||||||    
T  38029344 ctatacttaatctaattttaacctaatttttctctccacactttttaatttaatgtttatctaaagt 38029410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 160 - 205
Target Start/End: Complemental strand, 4849113 - 4849068
Alignment:
Q  160 ctaattttaacctaattttttcctccacacttttgcatttaatgtt 205  Q
    |||||||||||||||||||| ||||||||||||| |||||||||||    
T  4849113 ctaattttaacctaatttttccctccacacttttacatttaatgtt 4849068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 160 - 205
Target Start/End: Original strand, 33637924 - 33637969
Alignment:
Q  160 ctaattttaacctaattttttcctccacacttttgcatttaatgtt 205  Q
    |||||||||||||||||||| ||||||||||||| |||||||||||    
T  33637924 ctaattttaacctaatttttccctccacacttttacatttaatgtt 33637969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 160 - 212
Target Start/End: Complemental strand, 9150338 - 9150286
Alignment:
Q  160 ctaattttaacctaattttttcctccacacttttgcatttaatgttgatctaa 212  Q
    |||||||||||||||||||| |||||| |||||| ||||||||||| ||||||    
T  9150338 ctaattttaacctaatttttccctccatacttttacatttaatgtttatctaa 9150286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 160 - 212
Target Start/End: Complemental strand, 17171026 - 17170974
Alignment:
Q  160 ctaattttaacctaattttttcctccacacttttgcatttaatgttgatctaa 212  Q
    |||||||||||||||||||| |||||| |||||| ||||||||||| ||||||    
T  17171026 ctaattttaacctaatttttccctccagacttttacatttaatgtttatctaa 17170974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 168 - 220
Target Start/End: Complemental strand, 24396806 - 24396754
Alignment:
Q  168 aacctaattttttcctccacacttttgcatttaatgttgatctaaagtcaaat 220  Q
    |||||||||||| ||||||||||||| ||||||||||| ||||||||| ||||    
T  24396806 aacctaatttttccctccacactttttcatttaatgtttatctaaagtaaaat 24396754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 166 - 238
Target Start/End: Original strand, 32201465 - 32201537
Alignment:
Q  166 ttaacctaattttttcctccacacttttgcatttaatgttgatctaaagtcaaattatgtttctaattttatg 238  Q
    |||||||||||||| ||||||||||||||||||||||||| |  |||| | ||||||| || |||||| ||||    
T  32201465 ttaacctaatttttccctccacacttttgcatttaatgttaaagtaaaataaaattatattcctaattatatg 32201537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 160 - 220
Target Start/End: Original strand, 40107471 - 40107530
Alignment:
Q  160 ctaattttaacctaattttttcctccacacttttgcatttaatgttgatctaaagtcaaat 220  Q
    |||||||||| |||||||||||||| | |||||||||||||||||| ||||||||| ||||    
T  40107471 ctaattttaaactaattttttcctc-atacttttgcatttaatgtttatctaaagtaaaat 40107530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 160 - 212
Target Start/End: Original strand, 48528044 - 48528096
Alignment:
Q  160 ctaattttaacctaattttttcctccacacttttgcatttaatgttgatctaa 212  Q
    |||||||||||||||||||| |||||| |||||| ||||||||||| ||||||    
T  48528044 ctaattttaacctaatttttccctccagacttttacatttaatgtttatctaa 48528096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 9150922 - 9150879
Alignment:
Q  1 tttccctccacacttttgcatttaatatttatctaaagttaaat 44  Q
    |||||||||||||||||||||||||| |||||||||||| ||||    
T  9150922 tttccctccacacttttgcatttaatgtttatctaaagtaaaat 9150879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 17171642 - 17171599
Alignment:
Q  1 tttccctccacacttttgcatttaatatttatctaaagttaaat 44  Q
    |||||||||||||||||||||||||| |||||||||||| ||||    
T  17171642 tttccctccacacttttgcatttaatgtttatctaaagtaaaat 17171599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 24683054 - 24683097
Alignment:
Q  1 tttccctccacacttttgcatttaatatttatctaaagttaaat 44  Q
    |||||||||||||||||||||||||| |||||||||||| ||||    
T  24683054 tttccctccacacttttgcatttaatgtttatctaaagtaaaat 24683097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 27733714 - 27733757
Alignment:
Q  1 tttccctccacacttttgcatttaatatttatctaaagttaaat 44  Q
    |||||||||||||||||||||||||| |||||||||||| ||||    
T  27733714 tttccctccacacttttgcatttaatgtttatctaaagtaaaat 27733757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 29468723 - 29468680
Alignment:
Q  1 tttccctccacacttttgcatttaatatttatctaaagttaaat 44  Q
    |||||||||||||||||||||||||| |||||||||||| ||||    
T  29468723 tttccctccacacttttgcatttaatgtttatctaaagtaaaat 29468680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 33637419 - 33637462
Alignment:
Q  1 tttccctccacacttttgcatttaatatttatctaaagttaaat 44  Q
    |||||||||||||||||||||||||| |||||||||||| ||||    
T  33637419 tttccctccacacttttgcatttaatgtttatctaaagtaaaat 33637462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 40241453 - 40241496
Alignment:
Q  1 tttccctccacacttttgcatttaatatttatctaaagttaaat 44  Q
    ||||||||||||||||||||||||||||| ||||||||| ||||    
T  40241453 tttccctccacacttttgcatttaatattcatctaaagtaaaat 40241496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 49144794 - 49144837
Alignment:
Q  1 tttccctccacacttttgcatttaatatttatctaaagttaaat 44  Q
    |||||||||||||||||||||||||| |||||||||||| ||||    
T  49144794 tttccctccacacttttgcatttaatgtttatctaaagtaaaat 49144837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 166 - 220
Target Start/End: Original strand, 12409401 - 12409455
Alignment:
Q  166 ttaacctaattttttcctccacacttttgcatttaatgttgatctaaagtcaaat 220  Q
    |||||||||||||| |||| |||||||||||||||||||| |||| |||| ||||    
T  12409401 ttaacctaatttttccctcgacacttttgcatttaatgtttatcttaagtaaaat 12409455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 166 - 220
Target Start/End: Original strand, 20077659 - 20077712
Alignment:
Q  166 ttaacctaattttttcctccacacttttgcatttaatgttgatctaaagtcaaat 220  Q
    ||||||||||||||||||| ||| |||||||||||||||| ||||||||| ||||    
T  20077659 ttaacctaattttttcctc-acatttttgcatttaatgtttatctaaagtaaaat 20077712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 166 - 220
Target Start/End: Original strand, 36158683 - 36158736
Alignment:
Q  166 ttaacctaattttttcctccacacttttgcatttaatgttgatctaaagtcaaat 220  Q
    |||||||||||||| || |||||||||||||||||||||| ||||||||| ||||    
T  36158683 ttaacctaatttttccc-ccacacttttgcatttaatgtttatctaaagtaaaat 36158736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 166 - 215
Target Start/End: Original strand, 728744 - 728793
Alignment:
Q  166 ttaacctaattttttcctccacacttttgcatttaatgttgatctaaagt 215  Q
    ||||||||| |||| ||||||||||||| ||||||||||| |||||||||    
T  728744 ttaacctaacttttccctccacacttttccatttaatgtttatctaaagt 728793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 32201476 - 32201537
Alignment:
Q  1 tttccctccacacttttgcatttaatatttatctaaagttaaattatattcctaattttatg 62  Q
    |||||||||||||||||||||||||| || |  |||| | ||||||||||||||||| ||||    
T  32201476 tttccctccacacttttgcatttaatgttaaagtaaaataaaattatattcctaattatatg 32201537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 44
Target Start/End: Complemental strand, 4849727 - 4849687
Alignment:
Q  4 ccctccacacttttgcatttaatatttatctaaagttaaat 44  Q
    ||||||||||||||||||||||| |||||||||||| ||||    
T  4849727 ccctccacacttttgcatttaatgtttatctaaagtaaaat 4849687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 160 - 196
Target Start/End: Original strand, 21670430 - 21670466
Alignment:
Q  160 ctaattttaacctaattttttcctccacacttttgca 196  Q
    |||||||||||||||||||| ||||||||||||||||    
T  21670430 ctaattttaacctaatttttccctccacacttttgca 21670466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 172 - 220
Target Start/End: Original strand, 26454969 - 26455017
Alignment:
Q  172 taattttttcctccacacttttgcatttaatgttgatctaaagtcaaat 220  Q
    |||||||| ||||||||||||||||||||||||| || |||||| ||||    
T  26454969 taatttttccctccacacttttgcatttaatgtttatttaaagtaaaat 26455017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 160 - 212
Target Start/End: Original strand, 31898075 - 31898127
Alignment:
Q  160 ctaattttaacctaattttttcctccacacttttgcatttaatgttgatctaa 212  Q
    |||||||||||||||||||| |||||| |||||| |||||||| || ||||||    
T  31898075 ctaattttaacctaatttttccctccagacttttacatttaatttttatctaa 31898127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 160 - 196
Target Start/End: Complemental strand, 39277051 - 39277015
Alignment:
Q  160 ctaattttaacctaattttttcctccacacttttgca 196  Q
    |||||||||||||||||||| ||||||||||||||||    
T  39277051 ctaattttaacctaatttttccctccacacttttgca 39277015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 164 - 212
Target Start/End: Original strand, 39649238 - 39649286
Alignment:
Q  164 ttttaacctaattttttcctccacacttttgcatttaatgttgatctaa 212  Q
    |||||||||||||||| |||| |||||||| ||||||||||| ||||||    
T  39649238 ttttaacctaatttttccctctacacttttacatttaatgtttatctaa 39649286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 7855731 - 7855774
Alignment:
Q  1 tttccctccacacttttgcatttaatatttatctaaagttaaat 44  Q
    |||||| ||||||||||||||||||| |||||||||||| ||||    
T  7855731 tttccccccacacttttgcatttaatgtttatctaaagtaaaat 7855774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 5 - 44
Target Start/End: Original strand, 12409577 - 12409616
Alignment:
Q  5 cctccacacttttgcatttaatatttatctaaagttaaat 44  Q
    |||||||||||||||||||||| |||||||||||| ||||    
T  12409577 cctccacacttttgcatttaatgtttatctaaagtaaaat 12409616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 20077453 - 20077496
Alignment:
Q  1 tttccctccacacttttgcatttaatatttatctaaagttaaat 44  Q
    |||||||||||| ||||||||||||| |||||||||||| ||||    
T  20077453 tttccctccacaattttgcatttaatgtttatctaaagtaaaat 20077496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 24396797 - 24396754
Alignment:
Q  1 tttccctccacacttttgcatttaatatttatctaaagttaaat 44  Q
    ||||||||||||||||| |||||||| |||||||||||| ||||    
T  24396797 tttccctccacactttttcatttaatgtttatctaaagtaaaat 24396754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 24683784 - 24683827
Alignment:
Q  1 tttccctccacacttttgcatttaatatttatctaaagttaaat 44  Q
    ||||| |||||||||||||||||||| |||||||||||| ||||    
T  24683784 tttccatccacacttttgcatttaatgtttatctaaagtaaaat 24683827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 26454974 - 26455017
Alignment:
Q  1 tttccctccacacttttgcatttaatatttatctaaagttaaat 44  Q
    |||||||||||||||||||||||||| ||||| |||||| ||||    
T  26454974 tttccctccacacttttgcatttaatgtttatttaaagtaaaat 26455017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 5 - 44
Target Start/End: Original strand, 31897463 - 31897502
Alignment:
Q  5 cctccacacttttgcatttaatatttatctaaagttaaat 44  Q
    |||||||||||||||||||||| |||||||||||| ||||    
T  31897463 cctccacacttttgcatttaatgtttatctaaagtaaaat 31897502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 34873094 - 34873051
Alignment:
Q  1 tttccctccacacttttgcatttaatatttatctaaagttaaat 44  Q
    ||||| |||||||||||||||||||| |||||||||||| ||||    
T  34873094 tttccttccacacttttgcatttaatgtttatctaaagtaaaat 34873051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 5 - 44
Target Start/End: Original strand, 36158481 - 36158520
Alignment:
Q  5 cctccacacttttgcatttaatatttatctaaagttaaat 44  Q
    |||||||||||||||||||||| |||||||||||| ||||    
T  36158481 cctccacacttttgcatttaatgtttatctaaagtaaaat 36158520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 5 - 44
Target Start/End: Original strand, 40107720 - 40107759
Alignment:
Q  5 cctccacacttttgcatttaatatttatctaaagttaaat 44  Q
    |||||||||||||||||||||| |||||||||||| ||||    
T  40107720 cctccacacttttgcatttaatgtttatctaaagtaaaat 40107759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 728755 - 728793
Alignment:
Q  1 tttccctccacacttttgcatttaatatttatctaaagt 39  Q
    ||||||||||||||||| |||||||| ||||||||||||    
T  728755 tttccctccacacttttccatttaatgtttatctaaagt 728793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 35156138 - 35156176
Alignment:
Q  1 tttccctccacacttttgcatttaatatttatctaaagt 39  Q
    ||||||| |||||||||||||||||| ||||||||||||    
T  35156138 tttcccttcacacttttgcatttaatgtttatctaaagt 35156176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 166 - 220
Target Start/End: Complemental strand, 39704238 - 39704184
Alignment:
Q  166 ttaacctaattttttcctccacacttttgcatttaatgttgatctaaagtcaaat 220  Q
    ||||| || ||||| |||||||||||||||||||||| || ||||||||| ||||    
T  39704238 ttaacgtagtttttccctccacacttttgcatttaatatttatctaaagtaaaat 39704184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 144 - 220
Target Start/End: Original strand, 32201309 - 32201384
Alignment:
Q  144 tctcgctatactaaacctaattttaacctaattttttcctccacacttttgcatttaatgttgatctaaagtcaaat 220  Q
    |||| ||||||| |||||||||||||| ||| |||| || |||||||||| ||||||||| | ||||| ||| ||||    
T  32201309 tctcactatacttaacctaattttaacttaa-ttttccccccacacttttacatttaatggttatctatagtaaaat 32201384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 8 - 44
Target Start/End: Original strand, 36158700 - 36158736
Alignment:
Q  8 ccacacttttgcatttaatatttatctaaagttaaat 44  Q
    ||||||||||||||||||| |||||||||||| ||||    
T  36158700 ccacacttttgcatttaatgtttatctaaagtaaaat 36158736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 71; Significance: 3e-32; HSPs: 81)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 129 - 238
Target Start/End: Original strand, 29379249 - 29379359
Alignment:
Q  129 ataaagcttaacctgtctcgctatactaaacctaattttaacctaattttttcctccacac-ttttgcatttaatgttgatctaaagtcaaattatgttt 227  Q
    |||||| |||||| ||||||||||||| ||||||||||||||||||||||| ||||||||| |||| ||||||||||| ||||||| ||||||||||||     
T  29379249 ataaagtttaacccgtctcgctatacttaacctaattttaacctaatttttccctccacactttttacatttaatgtttatctaaattcaaattatgttc 29379348  T
Q  228 ctaattttatg 238  Q
    |||||||||||    
T  29379349 ctaattttatg 29379359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 126 - 220
Target Start/End: Complemental strand, 19121687 - 19121593
Alignment:
Q  126 cttataaagcttaacctgtctcgctatactaaacctaattttaacctaattttttcctccacacttttgcatttaatgttgatctaaagtcaaat 220  Q
    ||||||||  |||| | ||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||| ||||    
T  19121687 cttataaatgttaatccgtctcgctatacttaacctaattttaacccaattttttcctccacacttttgcatttaatgtttatctaaagtaaaat 19121593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 126 - 220
Target Start/End: Complemental strand, 42692035 - 42691941
Alignment:
Q  126 cttataaagcttaacctgtctcgctatactaaacctaattttaacctaattttttcctccacacttttgcatttaatgttgatctaaagtcaaat 220  Q
    ||||||||  |||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||  ||||||||| ||||    
T  42692035 cttataaatgttaacccgtctcgctatacttaacctaattttaacctaattttttcctccacactttttcatttaatgtgtatctaaagtaaaat 42691941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 136 - 213
Target Start/End: Original strand, 5398874 - 5398951
Alignment:
Q  136 ttaacctgtctcgctatactaaacctaattttaacctaattttttcctccacacttttgcatttaatgttgatctaaa 213  Q
    |||||| ||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  5398874 ttaacccgtctcgctatacttaacataattttaacctaattttttcctccacacttttgcatttaatgtttatctaaa 5398951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 126 - 220
Target Start/End: Original strand, 3890772 - 3890866
Alignment:
Q  126 cttataaagcttaacctgtctcgctatactaaacctaattttaacctaattttttcctccacacttttgcatttaatgttgatctaaagtcaaat 220  Q
    ||||||||  |||| | ||||||||||||| |||||||||||||| |||||||| ||||||||||||||||| ||||||| ||||||||| ||||    
T  3890772 cttataaatgttaatccgtctcgctatacttaacctaattttaacttaatttttccctccacacttttgcatataatgtttatctaaagtaaaat 3890866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 160 - 220
Target Start/End: Original strand, 752816 - 752876
Alignment:
Q  160 ctaattttaacctaattttttcctccacacttttgcatttaatgttgatctaaagtcaaat 220  Q
    |||||||||||||||||||| ||||||||||||||||||||||||| ||||||||| ||||    
T  752816 ctaattttaacctaatttttccctccacacttttgcatttaatgtttatctaaagtaaaat 752876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 160 - 220
Target Start/End: Complemental strand, 12418968 - 12418908
Alignment:
Q  160 ctaattttaacctaattttttcctccacacttttgcatttaatgttgatctaaagtcaaat 220  Q
    |||||||||||||||||||||||||||||||||||||| ||||||| ||||||||| ||||    
T  12418968 ctaattttaacctaattttttcctccacacttttgcatataatgtttatctaaagtaaaat 12418908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 160 - 220
Target Start/End: Original strand, 17637436 - 17637496
Alignment:
Q  160 ctaattttaacctaattttttcctccacacttttgcatttaatgttgatctaaagtcaaat 220  Q
    |||||||||||||||||||| ||||||||||||||||||||||||| ||||||||| ||||    
T  17637436 ctaattttaacctaatttttccctccacacttttgcatttaatgtttatctaaagtaaaat 17637496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 160 - 220
Target Start/End: Original strand, 25696171 - 25696231
Alignment:
Q  160 ctaattttaacctaattttttcctccacacttttgcatttaatgttgatctaaagtcaaat 220  Q
    ||||||||||||||||||||||||||||||||||| |||||||||| ||||||||| ||||    
T  25696171 ctaattttaacctaattttttcctccacacttttgaatttaatgtttatctaaagtaaaat 25696231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 160 - 220
Target Start/End: Original strand, 26601298 - 26601358
Alignment:
Q  160 ctaattttaacctaattttttcctccacacttttgcatttaatgttgatctaaagtcaaat 220  Q
    |||||||||||||||||||| ||||||||||||||||||||||||| ||||||||| ||||    
T  26601298 ctaattttaacctaatttttccctccacacttttgcatttaatgtttatctaaagtaaaat 26601358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 160 - 220
Target Start/End: Original strand, 33705388 - 33705448
Alignment:
Q  160 ctaattttaacctaattttttcctccacacttttgcatttaatgttgatctaaagtcaaat 220  Q
    |||||||||||||||||||| ||||||||||||||||||||||||| ||||||||| ||||    
T  33705388 ctaattttaacctaatttttccctccacacttttgcatttaatgtttatctaaagtaaaat 33705448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 160 - 220
Target Start/End: Complemental strand, 34718223 - 34718163
Alignment:
Q  160 ctaattttaacctaattttttcctccacacttttgcatttaatgttgatctaaagtcaaat 220  Q
    |||||||||||||||||||| ||||||||||||||||||||||||| ||||||||| ||||    
T  34718223 ctaattttaacctaatttttccctccacacttttgcatttaatgtttatctaaagtaaaat 34718163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 160 - 220
Target Start/End: Original strand, 34726003 - 34726063
Alignment:
Q  160 ctaattttaacctaattttttcctccacacttttgcatttaatgttgatctaaagtcaaat 220  Q
    |||||||||||||||||||| ||||||||||||||||||||||||| ||||||||| ||||    
T  34726003 ctaattttaacctaatttttccctccacacttttgcatttaatgtttatctaaagtaaaat 34726063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 160 - 220
Target Start/End: Original strand, 36885529 - 36885589
Alignment:
Q  160 ctaattttaacctaattttttcctccacacttttgcatttaatgttgatctaaagtcaaat 220  Q
    |||||||||||||||||||| ||||||||||||||||||||||||| ||||||||| ||||    
T  36885529 ctaattttaacctaatttttccctccacacttttgcatttaatgtttatctaaagtaaaat 36885589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 160 - 220
Target Start/End: Complemental strand, 41691907 - 41691847
Alignment:
Q  160 ctaattttaacctaattttttcctccacacttttgcatttaatgttgatctaaagtcaaat 220  Q
    |||||||||||||||||||| ||||||||||||||||||||||||| ||||||||| ||||    
T  41691907 ctaattttaacctaatttttccctccacacttttgcatttaatgtttatctaaagtaaaat 41691847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 160 - 220
Target Start/End: Original strand, 42976029 - 42976089
Alignment:
Q  160 ctaattttaacctaattttttcctccacacttttgcatttaatgttgatctaaagtcaaat 220  Q
    |||||||||||||||||||| ||||||||||||||||||||||||| ||||||||| ||||    
T  42976029 ctaattttaacctaatttttccctccacacttttgcatttaatgtttatctaaagtaaaat 42976089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 160 - 220
Target Start/End: Original strand, 43137021 - 43137081
Alignment:
Q  160 ctaattttaacctaattttttcctccacacttttgcatttaatgttgatctaaagtcaaat 220  Q
    |||||||||||||||||||| ||||||||||||||||||||||||| ||||||||| ||||    
T  43137021 ctaattttaacctaatttttccctccacacttttgcatttaatgtttatctaaagtaaaat 43137081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 126 - 220
Target Start/End: Original strand, 3891000 - 3891093
Alignment:
Q  126 cttataaagcttaacctgtctcgctatactaaacctaattttaacctaattttttcctccacacttttgcatttaatgttgatctaaagtcaaat 220  Q
    ||||||||  |||| | ||||||||||||| ||||||||||||||| ||||||| ||| ||||||||||||||||||||| ||||| ||| ||||    
T  3891000 cttataaatgttaatcagtctcgctatacttaacctaattttaaccaaatttttccct-cacacttttgcatttaatgtttatctagagtaaaat 3891093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 126 - 212
Target Start/End: Original strand, 5398771 - 5398856
Alignment:
Q  126 cttataaagcttaacctgtctcgctatactaaacctaattttaacctaattttttcctccacacttttgcatttaatgttgatctaa 212  Q
    ||||||||  |||||| ||||| |||||||  |||||||||||||||||||||| ||||||||||||||||||| ||||| ||||||    
T  5398771 cttataaatgttaacc-gtctcactatacttcacctaattttaacctaatttttccctccacacttttgcatttgatgtttatctaa 5398856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 160 - 212
Target Start/End: Original strand, 754192 - 754244
Alignment:
Q  160 ctaattttaacctaattttttcctccacacttttgcatttaatgttgatctaa 212  Q
    |||||||||||||||||||||||||||||||||| ||||||||||| ||||||    
T  754192 ctaattttaacctaattttttcctccacacttttacatttaatgtttatctaa 754244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 160 - 220
Target Start/End: Original strand, 6304553 - 6304613
Alignment:
Q  160 ctaattttaacctaattttttcctccacacttttgcatttaatgttgatctaaagtcaaat 220  Q
    |||||||||||||||||||| | ||||||||||||||||||||||| ||||||||| ||||    
T  6304553 ctaattttaacctaatttttccatccacacttttgcatttaatgtttatctaaagtaaaat 6304613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 160 - 212
Target Start/End: Original strand, 6305186 - 6305238
Alignment:
Q  160 ctaattttaacctaattttttcctccacacttttgcatttaatgttgatctaa 212  Q
    |||||||||||||||||||||||||||||||||| ||||||||||| ||||||    
T  6305186 ctaattttaacctaattttttcctccacacttttacatttaatgtttatctaa 6305238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 160 - 220
Target Start/End: Complemental strand, 18241908 - 18241848
Alignment:
Q  160 ctaattttaacctaattttttcctccacacttttgcatttaatgttgatctaaagtcaaat 220  Q
    |||||||||||||||||||||| ||||||||||||||||||||| | ||||||||| ||||    
T  18241908 ctaattttaacctaattttttcatccacacttttgcatttaatgattatctaaagtaaaat 18241848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 160 - 220
Target Start/End: Complemental strand, 25480934 - 25480874
Alignment:
Q  160 ctaattttaacctaattttttcctccacacttttgcatttaatgttgatctaaagtcaaat 220  Q
    ||||| |||||||||||||| ||||||||||||||||||||||||| ||||||||| ||||    
T  25480934 ctaatattaacctaatttttccctccacacttttgcatttaatgtttatctaaagtaaaat 25480874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 160 - 220
Target Start/End: Complemental strand, 30180722 - 30180662
Alignment:
Q  160 ctaattttaacctaattttttcctccacacttttgcatttaatgttgatctaaagtcaaat 220  Q
    |||||||||||||||||||| |||||||||||||||||||||| || ||||||||| ||||    
T  30180722 ctaattttaacctaatttttccctccacacttttgcatttaatatttatctaaagtaaaat 30180662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 160 - 220
Target Start/End: Original strand, 34726643 - 34726703
Alignment:
Q  160 ctaattttaacctaattttttcctccacacttttgcatttaatgttgatctaaagtcaaat 220  Q
    |||||||||||||||||||| ||||||||||||| ||||||||||| |||||| |||||||    
T  34726643 ctaattttaacctaatttttccctccacacttttacatttaatgtttatctaaggtcaaat 34726703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 160 - 220
Target Start/End: Complemental strand, 35393180 - 35393121
Alignment:
Q  160 ctaattttaacctaattttttcctccacacttttgcatttaatgttgatctaaagtcaaat 220  Q
    |||||||||||||||||||| ||||||||||||||||||||||||| ||||||||| ||||    
T  35393180 ctaattttaacctaattttt-cctccacacttttgcatttaatgtttatctaaagtaaaat 35393121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 160 - 220
Target Start/End: Original strand, 43137653 - 43137713
Alignment:
Q  160 ctaattttaacctaattttttcctccacacttttgcatttaatgttgatctaaagtcaaat 220  Q
    |||||||||||||||||||| | ||||||||||||||||||||||| ||||||||| ||||    
T  43137653 ctaattttaacctaatttttccatccacacttttgcatttaatgtttatctaaagtaaaat 43137713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 160 - 212
Target Start/End: Original strand, 43138286 - 43138338
Alignment:
Q  160 ctaattttaacctaattttttcctccacacttttgcatttaatgttgatctaa 212  Q
    |||||||||||||||||||||||||||||||||| ||||||||||| ||||||    
T  43138286 ctaattttaacctaattttttcctccacacttttacatttaatgtttatctaa 43138338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 160 - 215
Target Start/End: Original strand, 3890579 - 3890634
Alignment:
Q  160 ctaattttaacctaattttttcctccacacttttgcatttaatgttgatctaaagt 215  Q
    |||||||||||||||||||| ||||||||||||||||| ||||||| |||||||||    
T  3890579 ctaattttaacctaatttttccctccacacttttgcatataatgtttatctaaagt 3890634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 175 - 226
Target Start/End: Original strand, 22740699 - 22740750
Alignment:
Q  175 ttttttcctccacacttttgcatttaatgttgatctaaagtcaaattatgtt 226  Q
    ||||||||||||||||||||||||||||||| ||||||||| ||||||||||    
T  22740699 ttttttcctccacacttttgcatttaatgtttatctaaagtaaaattatgtt 22740750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 166 - 220
Target Start/End: Complemental strand, 25480582 - 25480528
Alignment:
Q  166 ttaacctaattttttcctccacacttttgcatttaatgttgatctaaagtcaaat 220  Q
    |||||||||||||| ||||||||||||||||||||||||| ||||||||| ||||    
T  25480582 ttaacctaatttttccctccacacttttgcatttaatgtttatctaaagtaaaat 25480528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 160 - 214
Target Start/End: Original strand, 42976653 - 42976707
Alignment:
Q  160 ctaattttaacctaattttttcctccacacttttgcatttaatgttgatctaaag 214  Q
    |||||||||||||||||||| ||||||||| ||||||||||||||| ||||||||    
T  42976653 ctaattttaacctaatttttccctccacacctttgcatttaatgtttatctaaag 42976707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 160 - 220
Target Start/End: Original strand, 753559 - 753619
Alignment:
Q  160 ctaattttaacctaattttttcctccacacttttgcatttaatgttgatctaaagtcaaat 220  Q
    |||||||||||||||||||| | |||| |||||||||||||||||| ||||||||| ||||    
T  753559 ctaattttaacctaatttttccatccatacttttgcatttaatgtttatctaaagtaaaat 753619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 160 - 220
Target Start/End: Complemental strand, 2182141 - 2182081
Alignment:
Q  160 ctaattttaacctaattttttcctccacacttttgcatttaatgttgatctaaagtcaaat 220  Q
    ||||||||||| |||||||| ||||| ||||||||||||||||||| ||||||||| ||||    
T  2182141 ctaattttaacttaatttttccctcctcacttttgcatttaatgtttatctaaagtaaaat 2182081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 160 - 212
Target Start/End: Original strand, 26601935 - 26601987
Alignment:
Q  160 ctaattttaacctaattttttcctccacacttttgcatttaatgttgatctaa 212  Q
    |||||||||||| ||||||||||||||||||||| ||||||||||| ||||||    
T  26601935 ctaattttaaccaaattttttcctccacacttttacatttaatgtttatctaa 26601987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 160 - 220
Target Start/End: Complemental strand, 35393806 - 35393747
Alignment:
Q  160 ctaattttaacctaattttttcctccacacttttgcatttaatgttgatctaaagtcaaat 220  Q
    |||||||||||||||||||  ||||||||||||||||||||||||| ||||||||| ||||    
T  35393806 ctaattttaacctaattttc-cctccacacttttgcatttaatgtttatctaaagtaaaat 35393747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 160 - 220
Target Start/End: Complemental strand, 39914607 - 39914547
Alignment:
Q  160 ctaattttaacctaattttttcctccacacttttgcatttaatgttgatctaaagtcaaat 220  Q
    ||||||||||||||||||||  |||||| ||||||||||||||||| ||||||||| ||||    
T  39914607 ctaattttaacctaatttttctctccacgcttttgcatttaatgtttatctaaagtaaaat 39914547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 160 - 220
Target Start/End: Complemental strand, 42692370 - 42692310
Alignment:
Q  160 ctaattttaacctaattttttcctccacacttttgcatttaatgttgatctaaagtcaaat 220  Q
    |||||||||| ||||||||| |||| |||||||||||||||||||| ||||||||| ||||    
T  42692370 ctaattttaaactaatttttccctctacacttttgcatttaatgtttatctaaagtaaaat 42692310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 161 - 220
Target Start/End: Complemental strand, 25480716 - 25480658
Alignment:
Q  161 taattttaacctaattttttcctccacacttttgcatttaatgttgatctaaagtcaaat 220  Q
    ||||||||||||||||||| |||| |||||||||||||||||||| ||||||||| ||||    
T  25480716 taattttaacctaatttttccctc-acacttttgcatttaatgtttatctaaagtaaaat 25480658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 30180705 - 30180662
Alignment:
Q  1 tttccctccacacttttgcatttaatatttatctaaagttaaat 44  Q
    ||||||||||||||||||||||||||||||||||||||| ||||    
T  30180705 tttccctccacacttttgcatttaatatttatctaaagtaaaat 30180662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 54
Target Start/End: Original strand, 22740705 - 22740754
Alignment:
Q  5 cctccacacttttgcatttaatatttatctaaagttaaattatattccta 54  Q
    |||||||||||||||||||||| |||||||||||| ||||||| ||||||    
T  22740705 cctccacacttttgcatttaatgtttatctaaagtaaaattatgttccta 22740754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 163 - 220
Target Start/End: Original strand, 41290296 - 41290352
Alignment:
Q  163 attttaacctaattttttcctccacacttttgcatttaatgttgatctaaagtcaaat 220  Q
    |||||||||||||||| |||||||||||||||||| ||||||| ||||||||| ||||    
T  41290296 attttaacctaatttt-tcctccacacttttgcatataatgtttatctaaagtaaaat 41290352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 160 - 220
Target Start/End: Original strand, 3087166 - 3087225
Alignment:
Q  160 ctaattttaacctaattttttcctccacacttttgcatttaatgttgatctaaagtcaaat 220  Q
    |||| ||||||||||||||| || |||||||||||||||||||||| ||||||||| ||||    
T  3087166 ctaactttaacctaatttttccc-ccacacttttgcatttaatgtttatctaaagtaaaat 3087225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 160 - 212
Target Start/End: Original strand, 12419825 - 12419877
Alignment:
Q  160 ctaattttaacctaattttttcctccacacttttgcatttaatgttgatctaa 212  Q
    |||||||||||||||||||| | || |||||||||||||||||||| ||||||    
T  12419825 ctaattttaacctaatttttccgtcaacacttttgcatttaatgtttatctaa 12419877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 29379297 - 29379394
Alignment:
Q  1 tttccctccacacttttg-catttaatatttatctaaagttaaattatattcctaattttatgctannnnnnnagaaaggaattaccccgccctatat 97  Q
    |||||||||||||||||  |||||||| |||||||||| | ||||||| |||||||||||||| ||        ||||| ||||||||||||||||||    
T  29379297 tttccctccacactttttacatttaatgtttatctaaattcaaattatgttcctaattttatgttatttttttggaaagaaattaccccgccctatat 29379394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 160 - 212
Target Start/End: Original strand, 33706019 - 33706070
Alignment:
Q  160 ctaattttaacctaattttttcctccacacttttgcatttaatgttgatctaa 212  Q
    ||||||||||||||||||| |||||||||||||| ||||||||||| ||||||    
T  33706019 ctaattttaacctaatttt-tcctccacacttttacatttaatgtttatctaa 33706070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 160 - 212
Target Start/End: Complemental strand, 34717590 - 34717538
Alignment:
Q  160 ctaattttaacctaattttttcctccacacttttgcatttaatgttgatctaa 212  Q
    |||||||||||||||||||| |||||| |||||| ||||||||||| ||||||    
T  34717590 ctaattttaacctaatttttccctccaaacttttacatttaatgtttatctaa 34717538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 160 - 212
Target Start/End: Complemental strand, 41691276 - 41691224
Alignment:
Q  160 ctaattttaacctaattttttcctccacacttttgcatttaatgttgatctaa 212  Q
    |||||||||||||||||||| |||||| |||||| ||||||||||| ||||||    
T  41691276 ctaattttaacctaatttttccctccagacttttacatttaatgtttatctaa 41691224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 144 - 220
Target Start/End: Complemental strand, 42692158 - 42692083
Alignment:
Q  144 tctcgctatactaaacctaattttaacctaattttttcctccacacttttgcatttaatgttgatctaaagtcaaat 220  Q
    |||||||||| | ||||||||||| | ||||||||| |||| ||||||| |||||||||||| ||||||||| ||||    
T  42692158 tctcgctatatttaacctaattttgatctaatttttccctc-acactttcgcatttaatgtttatctaaagtaaaat 42692083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 752833 - 752876
Alignment:
Q  1 tttccctccacacttttgcatttaatatttatctaaagttaaat 44  Q
    |||||||||||||||||||||||||| |||||||||||| ||||    
T  752833 tttccctccacacttttgcatttaatgtttatctaaagtaaaat 752876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 17637453 - 17637496
Alignment:
Q  1 tttccctccacacttttgcatttaatatttatctaaagttaaat 44  Q
    |||||||||||||||||||||||||| |||||||||||| ||||    
T  17637453 tttccctccacacttttgcatttaatgtttatctaaagtaaaat 17637496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 126 - 220
Target Start/End: Complemental strand, 18241763 - 18241662
Alignment:
Q  126 cttataaagcttaacctgtctcgctatactaaacctaatttt-------aacctaattttttcctccacacttttgcatttaatgttgatctaaagtcaa 218  Q
    ||||||||  |||||||||||||||||||| |||||||||||       |  |||||||||  |||||||||||| ||||||||||| ||||||||| ||    
T  18241763 cttataaatgttaacctgtctcgctatacttaacctaatttttctctccacactaatttttctctccacacttttacatttaatgtttatctaaagtaaa 18241664  T
Q  219 at 220  Q
    ||    
T  18241663 at 18241662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 25480571 - 25480528
Alignment:
Q  1 tttccctccacacttttgcatttaatatttatctaaagttaaat 44  Q
    |||||||||||||||||||||||||| |||||||||||| ||||    
T  25480571 tttccctccacacttttgcatttaatgtttatctaaagtaaaat 25480528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 25480917 - 25480874
Alignment:
Q  1 tttccctccacacttttgcatttaatatttatctaaagttaaat 44  Q
    |||||||||||||||||||||||||| |||||||||||| ||||    
T  25480917 tttccctccacacttttgcatttaatgtttatctaaagtaaaat 25480874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 26601315 - 26601358
Alignment:
Q  1 tttccctccacacttttgcatttaatatttatctaaagttaaat 44  Q
    |||||||||||||||||||||||||| |||||||||||| ||||    
T  26601315 tttccctccacacttttgcatttaatgtttatctaaagtaaaat 26601358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 33705405 - 33705448
Alignment:
Q  1 tttccctccacacttttgcatttaatatttatctaaagttaaat 44  Q
    |||||||||||||||||||||||||| |||||||||||| ||||    
T  33705405 tttccctccacacttttgcatttaatgtttatctaaagtaaaat 33705448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 34718206 - 34718163
Alignment:
Q  1 tttccctccacacttttgcatttaatatttatctaaagttaaat 44  Q
    |||||||||||||||||||||||||| |||||||||||| ||||    
T  34718206 tttccctccacacttttgcatttaatgtttatctaaagtaaaat 34718163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 34726020 - 34726063
Alignment:
Q  1 tttccctccacacttttgcatttaatatttatctaaagttaaat 44  Q
    |||||||||||||||||||||||||| |||||||||||| ||||    
T  34726020 tttccctccacacttttgcatttaatgtttatctaaagtaaaat 34726063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 35393790 - 35393747
Alignment:
Q  1 tttccctccacacttttgcatttaatatttatctaaagttaaat 44  Q
    |||||||||||||||||||||||||| |||||||||||| ||||    
T  35393790 tttccctccacacttttgcatttaatgtttatctaaagtaaaat 35393747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 36885546 - 36885589
Alignment:
Q  1 tttccctccacacttttgcatttaatatttatctaaagttaaat 44  Q
    |||||||||||||||||||||||||| |||||||||||| ||||    
T  36885546 tttccctccacacttttgcatttaatgtttatctaaagtaaaat 36885589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 41691890 - 41691847
Alignment:
Q  1 tttccctccacacttttgcatttaatatttatctaaagttaaat 44  Q
    |||||||||||||||||||||||||| |||||||||||| ||||    
T  41691890 tttccctccacacttttgcatttaatgtttatctaaagtaaaat 41691847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 42976046 - 42976089
Alignment:
Q  1 tttccctccacacttttgcatttaatatttatctaaagttaaat 44  Q
    |||||||||||||||||||||||||| |||||||||||| ||||    
T  42976046 tttccctccacacttttgcatttaatgtttatctaaagtaaaat 42976089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 43137038 - 43137081
Alignment:
Q  1 tttccctccacacttttgcatttaatatttatctaaagttaaat 44  Q
    |||||||||||||||||||||||||| |||||||||||| ||||    
T  43137038 tttccctccacacttttgcatttaatgtttatctaaagtaaaat 43137081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 14854237 - 14854299
Alignment:
Q  1 tttccctccacacttttgcatttaatatttatctaaagttaaattatattcctaattttatgc 63  Q
    |||||||| ||||||||||||||||| |||||||| || |||||||| || ||||||| ||||    
T  14854237 tttccctcaacacttttgcatttaatgtttatctacaggtaaattatgtttctaatttcatgc 14854299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 181 - 239
Target Start/End: Original strand, 14854241 - 14854299
Alignment:
Q  181 cctccacacttttgcatttaatgttgatctaaagtcaaattatgtttctaattttatgc 239  Q
    |||| |||||||||||||||||||| ||||| ||  |||||||||||||||||| ||||    
T  14854241 cctcaacacttttgcatttaatgtttatctacaggtaaattatgtttctaatttcatgc 14854299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 160 - 212
Target Start/End: Original strand, 25696802 - 25696854
Alignment:
Q  160 ctaattttaacctaattttttcctccacacttttgcatttaatgttgatctaa 212  Q
    |||||||||||||||||||| |||| | |||||| ||||||||||| ||||||    
T  25696802 ctaattttaacctaatttttccctctagacttttacatttaatgtttatctaa 25696854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 164 - 212
Target Start/End: Complemental strand, 30180085 - 30180037
Alignment:
Q  164 ttttaacctaattttttcctccacacttttgcatttaatgttgatctaa 212  Q
    |||||||||||||||| |||||| |||||| ||||||||||| ||||||    
T  30180085 ttttaacctaatttttccctccagacttttacatttaatgtttatctaa 30180037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 2182124 - 2182081
Alignment:
Q  1 tttccctccacacttttgcatttaatatttatctaaagttaaat 44  Q
    ||||||||| |||||||||||||||| |||||||||||| ||||    
T  2182124 tttccctcctcacttttgcatttaatgtttatctaaagtaaaat 2182081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #70
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 3890596 - 3890656
Alignment:
Q  1 tttccctccacacttttgcatttaatatttatctaaagt----taaattatattcctaatt 57  Q
    ||||||||||||||||||||| |||| ||||||||||||    |||||||| |||||||||    
T  3890596 tttccctccacacttttgcatataatgtttatctaaagtataataaattatgttcctaatt 3890656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #71
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 3890823 - 3890866
Alignment:
Q  1 tttccctccacacttttgcatttaatatttatctaaagttaaat 44  Q
    ||||||||||||||||||||| |||| |||||||||||| ||||    
T  3890823 tttccctccacacttttgcatataatgtttatctaaagtaaaat 3890866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #72
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 6304570 - 6304613
Alignment:
Q  1 tttccctccacacttttgcatttaatatttatctaaagttaaat 44  Q
    ||||| |||||||||||||||||||| |||||||||||| ||||    
T  6304570 tttccatccacacttttgcatttaatgtttatctaaagtaaaat 6304613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #73
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 5 - 44
Target Start/End: Complemental strand, 19121632 - 19121593
Alignment:
Q  5 cctccacacttttgcatttaatatttatctaaagttaaat 44  Q
    |||||||||||||||||||||| |||||||||||| ||||    
T  19121632 cctccacacttttgcatttaatgtttatctaaagtaaaat 19121593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #74
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 5 - 44
Target Start/End: Complemental strand, 35393160 - 35393121
Alignment:
Q  5 cctccacacttttgcatttaatatttatctaaagttaaat 44  Q
    |||||||||||||||||||||| |||||||||||| ||||    
T  35393160 cctccacacttttgcatttaatgtttatctaaagtaaaat 35393121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #75
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 42692353 - 42692310
Alignment:
Q  1 tttccctccacacttttgcatttaatatttatctaaagttaaat 44  Q
    |||||||| ||||||||||||||||| |||||||||||| ||||    
T  42692353 tttccctctacacttttgcatttaatgtttatctaaagtaaaat 42692310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #76
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 43137670 - 43137713
Alignment:
Q  1 tttccctccacacttttgcatttaatatttatctaaagttaaat 44  Q
    ||||| |||||||||||||||||||| |||||||||||| ||||    
T  43137670 tttccatccacacttttgcatttaatgtttatctaaagtaaaat 43137713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #77
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 166 - 220
Target Start/End: Original strand, 41290422 - 41290476
Alignment:
Q  166 ttaacctaattttttcctccacacttttgcatttaatgttgatctaaagtcaaat 220  Q
    ||||| ||||||||   ||||||||||||||||||||||| ||||||||| ||||    
T  41290422 ttaacttaatttttctatccacacttttgcatttaatgtttatctaaagtaaaat 41290476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #78
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 7 - 44
Target Start/End: Original strand, 41290439 - 41290476
Alignment:
Q  7 tccacacttttgcatttaatatttatctaaagttaaat 44  Q
    |||||||||||||||||||| |||||||||||| ||||    
T  41290439 tccacacttttgcatttaatgtttatctaaagtaaaat 41290476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #79
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 42976670 - 42976707
Alignment:
Q  1 tttccctccacacttttgcatttaatatttatctaaag 38  Q
    ||||||||||||| |||||||||||| |||||||||||    
T  42976670 tttccctccacacctttgcatttaatgtttatctaaag 42976707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #80
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 8 - 44
Target Start/End: Original strand, 3087189 - 3087225
Alignment:
Q  8 ccacacttttgcatttaatatttatctaaagttaaat 44  Q
    ||||||||||||||||||| |||||||||||| ||||    
T  3087189 ccacacttttgcatttaatgtttatctaaagtaaaat 3087225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #81
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 37
Target Start/End: Original strand, 5398919 - 5398951
Alignment:
Q  5 cctccacacttttgcatttaatatttatctaaa 37  Q
    |||||||||||||||||||||| ||||||||||    
T  5398919 cctccacacttttgcatttaatgtttatctaaa 5398951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 67; Significance: 8e-30; HSPs: 5)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 126 - 220
Target Start/End: Original strand, 87516 - 87610
Alignment:
Q  126 cttataaagcttaacctgtctcgctatactaaacctaattttaacctaattttttcctccacacttttgcatttaatgttgatctaaagtcaaat 220  Q
    ||||||||  |||||| ||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||    
T  87516 cttataaatgttaacccgtctcgctatagttaacctaattttaacctaattttttcctccacacttttgcatttaatgtttatctaaagtaaaat 87610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 160 - 220
Target Start/End: Original strand, 87185 - 87245
Alignment:
Q  160 ctaattttaacctaattttttcctccacacttttgcatttaatgttgatctaaagtcaaat 220  Q
    |||||||||| |||||||||||||||||||||||||||||||| || ||||||||| ||||    
T  87185 ctaattttaaactaattttttcctccacacttttgcatttaatatttatctaaagtaaaat 87245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 44
Target Start/End: Original strand, 87206 - 87245
Alignment:
Q  5 cctccacacttttgcatttaatatttatctaaagttaaat 44  Q
    ||||||||||||||||||||||||||||||||||| ||||    
T  87206 cctccacacttttgcatttaatatttatctaaagtaaaat 87245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044; HSP #4
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 5 - 44
Target Start/End: Original strand, 87571 - 87610
Alignment:
Q  5 cctccacacttttgcatttaatatttatctaaagttaaat 44  Q
    |||||||||||||||||||||| |||||||||||| ||||    
T  87571 cctccacacttttgcatttaatgtttatctaaagtaaaat 87610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044; HSP #5
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 143 - 220
Target Start/End: Original strand, 87395 - 87471
Alignment:
Q  143 gtctcgctatactaaacctaattttaacctaattttttcctccacacttttgcatttaatgttgatctaaagtcaaat 220  Q
    ||||| ||||||| ||||||| | ||||| ||||||| | ||  ||||||||||||||||||| ||||||||| ||||    
T  87395 gtctcactatacttaacctaaatataaccaaatttttccatcg-cacttttgcatttaatgtttatctaaagtaaaat 87471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1155 (Bit Score: 63; Significance: 2e-27; HSPs: 3)
Name: scaffold1155
Description:

Target: scaffold1155; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 126 - 220
Target Start/End: Complemental strand, 479 - 385
Alignment:
Q  126 cttataaagcttaacctgtctcgctatactaaacctaattttaacctaattttttcctccacacttttgcatttaatgttgatctaaagtcaaat 220  Q
    ||||||||  |||||| ||||||||||||| ||||||||||||||||||||||| |||| |||||||||||||||||||| ||||||||| ||||    
T  479 cttataaatgttaacccgtctcgctatacttaacctaattttaacctaatttttccctcgacacttttgcatttaatgtttatctaaagtaaaat 385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1155; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 428 - 385
Alignment:
Q  1 tttccctccacacttttgcatttaatatttatctaaagttaaat 44  Q
    |||||||| ||||||||||||||||| |||||||||||| ||||    
T  428 tttccctcgacacttttgcatttaatgtttatctaaagtaaaat 385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1155; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 1308 - 1270
Alignment:
Q  1 tttccctccacacttttgcatttaatatttatctaaagt 39  Q
    |||||||||||||||||||||||||| |||||| |||||    
T  1308 tttccctccacacttttgcatttaatgtttatcaaaagt 1270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0345 (Bit Score: 63; Significance: 2e-27; HSPs: 3)
Name: scaffold0345
Description:

Target: scaffold0345; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 126 - 220
Target Start/End: Original strand, 9738 - 9832
Alignment:
Q  126 cttataaagcttaacctgtctcgctatactaaacctaattttaacctaattttttcctccacacttttgcatttaatgttgatctaaagtcaaat 220  Q
    ||||||||  |||||| ||||||||||||| ||||||||||||||||||||||| |||| |||||||||||||||||||| ||||||||| ||||    
T  9738 cttataaatgttaacccgtctcgctatacttaacctaattttaacctaatttttccctcgacacttttgcatttaatgtttatctaaagtaaaat 9832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0345; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 9789 - 9832
Alignment:
Q  1 tttccctccacacttttgcatttaatatttatctaaagttaaat 44  Q
    |||||||| ||||||||||||||||| |||||||||||| ||||    
T  9789 tttccctcgacacttttgcatttaatgtttatctaaagtaaaat 9832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0345; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 8908 - 8946
Alignment:
Q  1 tttccctccacacttttgcatttaatatttatctaaagt 39  Q
    |||||||||||||||||||||||||| |||||| |||||    
T  8908 tttccctccacacttttgcatttaatgtttatcaaaagt 8946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0105 (Bit Score: 63; Significance: 2e-27; HSPs: 3)
Name: scaffold0105
Description:

Target: scaffold0105; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 126 - 220
Target Start/End: Complemental strand, 29242 - 29148
Alignment:
Q  126 cttataaagcttaacctgtctcgctatactaaacctaattttaacctaattttttcctccacacttttgcatttaatgttgatctaaagtcaaat 220  Q
    ||||||||  |||||| ||||||||||||| ||||||||||||||||||||||| |||| |||||||||||||||||||| ||||||||| ||||    
T  29242 cttataaatgttaacccgtctcgctatacttaacctaattttaacctaatttttccctcgacacttttgcatttaatgtttatctaaagtaaaat 29148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0105; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 29191 - 29148
Alignment:
Q  1 tttccctccacacttttgcatttaatatttatctaaagttaaat 44  Q
    |||||||| ||||||||||||||||| |||||||||||| ||||    
T  29191 tttccctcgacacttttgcatttaatgtttatctaaagtaaaat 29148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0105; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 30071 - 30033
Alignment:
Q  1 tttccctccacacttttgcatttaatatttatctaaagt 39  Q
    |||||||||||||||||||||||||| |||||| |||||    
T  30071 tttccctccacacttttgcatttaatgtttatcaaaagt 30033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 63; Significance: 2e-27; HSPs: 37)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 126 - 220
Target Start/End: Complemental strand, 19989330 - 19989236
Alignment:
Q  126 cttataaagcttaacctgtctcgctatactaaacctaattttaacctaattttttcctccacacttttgcatttaatgttgatctaaagtcaaat 220  Q
    ||||||||  |||||| || |||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||| ||||    
T  19989330 cttataaatgttaacccgtttcgctatacttaacctaattttaacctaattttttcctccacacttttgcttttaatgtttatctaaagtaaaat 19989236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 126 - 220
Target Start/End: Complemental strand, 33007604 - 33007510
Alignment:
Q  126 cttataaagcttaacctgtctcgctatactaaacctaattttaacctaattttttcctccacacttttgcatttaatgttgatctaaagtcaaat 220  Q
    ||||||||  |||||| ||||||||||||| ||| ||||||||||||||||||| ||||||||||||||||||||||||| ||||||||| ||||    
T  33007604 cttataaatgttaacccgtctcgctatacttaacttaattttaacctaatttttccctccacacttttgcatttaatgtttatctaaagtaaaat 33007510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 136 - 213
Target Start/End: Complemental strand, 14366271 - 14366194
Alignment:
Q  136 ttaacctgtctcgctatactaaacctaattttaacctaattttttcctccacacttttgcatttaatgttgatctaaa 213  Q
    |||||| |||||| | |||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  14366271 ttaacccgtctcgttgtactcaacctaattttaacctaattttttcctccacacttttgcatttaatgtttatctaaa 14366194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 160 - 220
Target Start/End: Complemental strand, 1221153 - 1221093
Alignment:
Q  160 ctaattttaacctaattttttcctccacacttttgcatttaatgttgatctaaagtcaaat 220  Q
    |||||||||||||||||||| ||||||||||||||||||||||||| ||||||||| ||||    
T  1221153 ctaattttaacctaatttttccctccacacttttgcatttaatgtttatctaaagtaaaat 1221093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 160 - 220
Target Start/End: Complemental strand, 4109351 - 4109291
Alignment:
Q  160 ctaattttaacctaattttttcctccacacttttgcatttaatgttgatctaaagtcaaat 220  Q
    ||||||| |||||||||||||||||||||||||||||||||||||| ||||||||| ||||    
T  4109351 ctaatttaaacctaattttttcctccacacttttgcatttaatgtttatctaaagtaaaat 4109291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 160 - 220
Target Start/End: Complemental strand, 24446560 - 24446500
Alignment:
Q  160 ctaattttaacctaattttttcctccacacttttgcatttaatgttgatctaaagtcaaat 220  Q
    |||||||||||||||||||| ||||||||||||||||||||||||| ||||||||| ||||    
T  24446560 ctaattttaacctaatttttccctccacacttttgcatttaatgtttatctaaagtaaaat 24446500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 160 - 220
Target Start/End: Complemental strand, 4108718 - 4108658
Alignment:
Q  160 ctaattttaacctaattttttcctccacacttttgcatttaatgttgatctaaagtcaaat 220  Q
    |||||||||||||||||||| ||||||||||||| ||||||||||| |||||| |||||||    
T  4108718 ctaattttaacctaatttttccctccacacttttacatttaatgtttatctaaggtcaaat 4108658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 160 - 212
Target Start/End: Original strand, 4897222 - 4897274
Alignment:
Q  160 ctaattttaacctaattttttcctccacacttttgcatttaatgttgatctaa 212  Q
    |||||||||||||||||||||||||||||||||| ||||||||||| ||||||    
T  4897222 ctaattttaacctaattttttcctccacacttttacatttaatgtttatctaa 4897274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 160 - 220
Target Start/End: Complemental strand, 35159530 - 35159470
Alignment:
Q  160 ctaattttaacctaattttttcctccacacttttgcatttaatgttgatctaaagtcaaat 220  Q
    |||||||||||||||||||| | ||||||||||||||||||||||| ||||||||| ||||    
T  35159530 ctaattttaacctaatttttccatccacacttttgcatttaatgtttatctaaagtaaaat 35159470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 166 - 220
Target Start/End: Complemental strand, 33004479 - 33004425
Alignment:
Q  166 ttaacctaattttttcctccacacttttgcatttaatgttgatctaaagtcaaat 220  Q
    |||||||||||||| ||||||||||||||||||||||||| ||||||||| ||||    
T  33004479 ttaacctaatttttccctccacacttttgcatttaatgtttatctaaagtaaaat 33004425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 160 - 220
Target Start/End: Original strand, 4896590 - 4896650
Alignment:
Q  160 ctaattttaacctaattttttcctccacacttttgcatttaatgttgatctaaagtcaaat 220  Q
    |||||||||||||||||||| ||||||  ||||||||||||||||| ||||||||| ||||    
T  4896590 ctaattttaacctaatttttccctccatgcttttgcatttaatgtttatctaaagtaaaat 4896650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 160 - 212
Target Start/End: Original strand, 33320701 - 33320753
Alignment:
Q  160 ctaattttaacctaattttttcctccacacttttgcatttaatgttgatctaa 212  Q
    |||||||||||||||||||| ||||||||||||| ||||||||||| ||||||    
T  33320701 ctaattttaacctaatttttccctccacacttttacatttaatgtttatctaa 33320753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 160 - 212
Target Start/End: Complemental strand, 35158963 - 35158911
Alignment:
Q  160 ctaattttaacctaattttttcctccacacttttgcatttaatgttgatctaa 212  Q
    |||||||||||||||||||| ||||||||||||| ||||||||||| ||||||    
T  35158963 ctaattttaacctaatttttacctccacacttttacatttaatgtttatctaa 35158911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 160 - 212
Target Start/End: Complemental strand, 1220520 - 1220468
Alignment:
Q  160 ctaattttaacctaattttttcctccacacttttgcatttaatgttgatctaa 212  Q
    |||||||||||||||||||| |||||| |||||| ||||||||||| ||||||    
T  1220520 ctaattttaacctaatttttccctccagacttttacatttaatgtttatctaa 1220468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 160 - 212
Target Start/End: Original strand, 9979348 - 9979400
Alignment:
Q  160 ctaattttaacctaattttttcctccacacttttgcatttaatgttgatctaa 212  Q
    |||||||||||||||||||| |||||| |||||| ||||||||||| ||||||    
T  9979348 ctaattttaacctaatttttccctccagacttttacatttaatgtttatctaa 9979400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 160 - 212
Target Start/End: Complemental strand, 14832476 - 14832424
Alignment:
Q  160 ctaattttaacctaattttttcctccacacttttgcatttaatgttgatctaa 212  Q
    |||||||||||||||||||| |||||||||||||  |||||||||| ||||||    
T  14832476 ctaattttaacctaatttttacctccacacttttaaatttaatgtttatctaa 14832424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 160 - 220
Target Start/End: Complemental strand, 21078258 - 21078198
Alignment:
Q  160 ctaattttaacctaattttttcctccacacttttgcatttaatgttgatctaaagtcaaat 220  Q
    ||||||||||||||||||||  |||||| ||||||||||||||||| ||||| ||| ||||    
T  21078258 ctaattttaacctaatttttctctccacgcttttgcatttaatgtttatctatagtaaaat 21078198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 160 - 212
Target Start/End: Complemental strand, 24445927 - 24445875
Alignment:
Q  160 ctaattttaacctaattttttcctccacacttttgcatttaatgttgatctaa 212  Q
    |||||||||||||||||||| |||||| |||||| ||||||||||| ||||||    
T  24445927 ctaattttaacctaatttttccctccagacttttacatttaatgtttatctaa 24445875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 160 - 220
Target Start/End: Original strand, 33320179 - 33320239
Alignment:
Q  160 ctaattttaacctaattttttcctccacacttttgcatttaatgttgatctaaagtcaaat 220  Q
    |||||||||||||||||||| | |||||| ||||||||||| |||| ||||||||| ||||    
T  33320179 ctaattttaacctaatttttccatccacatttttgcatttattgtttatctaaagtaaaat 33320239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 1221136 - 1221093
Alignment:
Q  1 tttccctccacacttttgcatttaatatttatctaaagttaaat 44  Q
    |||||||||||||||||||||||||| |||||||||||| ||||    
T  1221136 tttccctccacacttttgcatttaatgtttatctaaagtaaaat 1221093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 19989635 - 19989592
Alignment:
Q  1 tttccctccacacttttgcatttaatatttatctaaagttaaat 44  Q
    |||||||||||||||||||||||||| |||||||||||| ||||    
T  19989635 tttccctccacacttttgcatttaatgtttatctaaagtaaaat 19989592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 160 - 203
Target Start/End: Complemental strand, 21055145 - 21055102
Alignment:
Q  160 ctaattttaacctaattttttcctccacacttttgcatttaatg 203  Q
    ||||||||||||||||||||  ||||||||||||||||||||||    
T  21055145 ctaattttaacctaatttttctctccacacttttgcatttaatg 21055102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 24446543 - 24446500
Alignment:
Q  1 tttccctccacacttttgcatttaatatttatctaaagttaaat 44  Q
    |||||||||||||||||||||||||| |||||||||||| ||||    
T  24446543 tttccctccacacttttgcatttaatgtttatctaaagtaaaat 24446500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 33004468 - 33004425
Alignment:
Q  1 tttccctccacacttttgcatttaatatttatctaaagttaaat 44  Q
    |||||||||||||||||||||||||| |||||||||||| ||||    
T  33004468 tttccctccacacttttgcatttaatgtttatctaaagtaaaat 33004425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 33007553 - 33007510
Alignment:
Q  1 tttccctccacacttttgcatttaatatttatctaaagttaaat 44  Q
    |||||||||||||||||||||||||| |||||||||||| ||||    
T  33007553 tttccctccacacttttgcatttaatgtttatctaaagtaaaat 33007510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 166 - 220
Target Start/End: Complemental strand, 14366381 - 14366327
Alignment:
Q  166 ttaacctaattttttcctccacacttttgcatttaatgttgatctaaagtcaaat 220  Q
    |||| ||||||||| ||||||| ||||||||||||||||| ||||||||| ||||    
T  14366381 ttaagctaatttttccctccactcttttgcatttaatgtttatctaaagtaaaat 14366327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 166 - 220
Target Start/End: Complemental strand, 19987990 - 19987937
Alignment:
Q  166 ttaacctaattttttcctccacacttttgcatttaatgttgatctaaagtcaaat 220  Q
    |||||||||||||| |||| |||||||||||||||||||| ||||||||| ||||    
T  19987990 ttaacctaatttttccctc-acacttttgcatttaatgtttatctaaagtaaaat 19987937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 174 - 220
Target Start/End: Complemental strand, 19989638 - 19989592
Alignment:
Q  174 attttttcctccacacttttgcatttaatgttgatctaaagtcaaat 220  Q
    |||||| ||||||||||||||||||||||||| ||||||||| ||||    
T  19989638 atttttccctccacacttttgcatttaatgtttatctaaagtaaaat 19989592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 20 - 65
Target Start/End: Original strand, 8674560 - 8674605
Alignment:
Q  20 atttaatatttatctaaagttaaattatattcctaattttatgcta 65  Q
    ||||||| |||||| ||||||||||||| |||||||||||||||||    
T  8674560 atttaatgtttatcaaaagttaaattatgttcctaattttatgcta 8674605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 20 - 65
Target Start/End: Original strand, 8685239 - 8685284
Alignment:
Q  20 atttaatatttatctaaagttaaattatattcctaattttatgcta 65  Q
    ||||||| |||||| ||||||||||||| |||||||||||||||||    
T  8685239 atttaatgtttatcaaaagttaaattatgttcctaattttatgcta 8685284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 5 - 44
Target Start/End: Complemental strand, 4109330 - 4109291
Alignment:
Q  5 cctccacacttttgcatttaatatttatctaaagttaaat 44  Q
    |||||||||||||||||||||| |||||||||||| ||||    
T  4109330 cctccacacttttgcatttaatgtttatctaaagtaaaat 4109291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 14366370 - 14366327
Alignment:
Q  1 tttccctccacacttttgcatttaatatttatctaaagttaaat 44  Q
    ||||||||||| |||||||||||||| |||||||||||| ||||    
T  14366370 tttccctccactcttttgcatttaatgtttatctaaagtaaaat 14366327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 35159513 - 35159470
Alignment:
Q  1 tttccctccacacttttgcatttaatatttatctaaagttaaat 44  Q
    ||||| |||||||||||||||||||| |||||||||||| ||||    
T  35159513 tttccatccacacttttgcatttaatgtttatctaaagtaaaat 35159470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 196 - 241
Target Start/End: Original strand, 8674560 - 8674605
Alignment:
Q  196 atttaatgttgatctaaagtcaaattatgtttctaattttatgcta 241  Q
    |||||||||| ||| ||||| |||||||||| ||||||||||||||    
T  8674560 atttaatgtttatcaaaagttaaattatgttcctaattttatgcta 8674605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 196 - 241
Target Start/End: Original strand, 8685239 - 8685284
Alignment:
Q  196 atttaatgttgatctaaagtcaaattatgtttctaattttatgcta 241  Q
    |||||||||| ||| ||||| |||||||||| ||||||||||||||    
T  8685239 atttaatgtttatcaaaagttaaattatgttcctaattttatgcta 8685284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 37
Target Start/End: Complemental strand, 14366226 - 14366194
Alignment:
Q  5 cctccacacttttgcatttaatatttatctaaa 37  Q
    |||||||||||||||||||||| ||||||||||    
T  14366226 cctccacacttttgcatttaatgtttatctaaa 14366194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 160 - 196
Target Start/End: Original strand, 15045172 - 15045208
Alignment:
Q  160 ctaattttaacctaattttttcctccacacttttgca 196  Q
    ||||||||| |||||||||| ||||||||||||||||    
T  15045172 ctaattttatcctaatttttccctccacacttttgca 15045208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 62; Significance: 7e-27; HSPs: 94)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 127 - 220
Target Start/End: Complemental strand, 49750697 - 49750604
Alignment:
Q  127 ttataaagcttaacctgtctcgctatactaaacctaattttaacctaattttttcctccacacttttgcatttaatgttgatctaaagtcaaat 220  Q
    |||||||  |||||| ||||||||||||| ||||||||||||| ||||||||| ||||||||||||||||||||||||| ||||||||| ||||    
T  49750697 ttataaatgttaacccgtctcgctatacttaacctaattttaatctaatttttccctccacacttttgcatttaatgtttatctaaagtaaaat 49750604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 126 - 220
Target Start/End: Complemental strand, 54094686 - 54094592
Alignment:
Q  126 cttataaagcttaacctgtctcgctatactaaacctaattttaacctaattttttcctccacacttttgcatttaatgttgatctaaagtcaaat 220  Q
    ||||||||  |||||| |||| |||||||| |||||| |||||||||||||||| ||||||||||||||||||||||||| ||||||||| ||||    
T  54094686 cttataaatgttaacccgtcttgctatacttaacctagttttaacctaatttttccctccacacttttgcatttaatgtttatctaaagtaaaat 54094592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 126 - 213
Target Start/End: Complemental strand, 54093301 - 54093214
Alignment:
Q  126 cttataaagcttaacctgtctcgctatactaaacctaattttaacctaattttttcctccacacttttgcatttaatgttgatctaaa 213  Q
    ||||||||  |||||| |||| | |||||| ||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||    
T  54093301 cttataaatgttaacccgtcttgttatacttaacctaattttaacctaatttttccctccacacttttgcatttaatgtttatctaaa 54093214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 160 - 220
Target Start/End: Original strand, 9061242 - 9061302
Alignment:
Q  160 ctaattttaacctaattttttcctccacacttttgcatttaatgttgatctaaagtcaaat 220  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||    
T  9061242 ctaattttaacctaattttttcctccacacttttgcatttaatgtttatctaaagtaaaat 9061302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 160 - 220
Target Start/End: Original strand, 39405346 - 39405406
Alignment:
Q  160 ctaattttaacctaattttttcctccacacttttgcatttaatgttgatctaaagtcaaat 220  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||    
T  39405346 ctaattttaacctaattttttcctccacacttttgcatttaatgtttatctaaagtaaaat 39405406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 160 - 220
Target Start/End: Original strand, 39714129 - 39714189
Alignment:
Q  160 ctaattttaacctaattttttcctccacacttttgcatttaatgttgatctaaagtcaaat 220  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||    
T  39714129 ctaattttaacctaattttttcctccacacttttgcatttaatgtttatctaaagtaaaat 39714189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 160 - 220
Target Start/End: Original strand, 50118700 - 50118760
Alignment:
Q  160 ctaattttaacctaattttttcctccacacttttgcatttaatgttgatctaaagtcaaat 220  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||    
T  50118700 ctaattttaacctaattttttcctccacacttttgcatttaatgtttatctaaagtaaaat 50118760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 146 - 220
Target Start/End: Complemental strand, 4875816 - 4875742
Alignment:
Q  146 tcgctatactaaacctaattttaacctaattttttcctccacacttttgcatttaatgttgatctaaagtcaaat 220  Q
    ||||| |||| |||||||||||||||||||||||| || ||||||||||||||||||||| ||||||||| ||||    
T  4875816 tcgctgtacttaacctaattttaacctaatttttttcttcacacttttgcatttaatgtttatctaaagtaaaat 4875742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 126 - 220
Target Start/End: Complemental strand, 54095337 - 54095243
Alignment:
Q  126 cttataaagcttaacctgtctcgctatactaaacctaattttaacctaattttttcctccacacttttgcatttaatgttgatctaaagtcaaat 220  Q
    ||||||||  |||||||||||| ||||||| |||||| ||||||||||||||||  |||||||| |||||||||| |||| ||||||||| ||||    
T  54095337 cttataaatgttaacctgtctcactatacttaacctatttttaacctaatttttcactccacacctttgcatttattgtttatctaaagtaaaat 54095243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 160 - 220
Target Start/End: Complemental strand, 2116856 - 2116796
Alignment:
Q  160 ctaattttaacctaattttttcctccacacttttgcatttaatgttgatctaaagtcaaat 220  Q
    |||||||||||||||||||| ||||||||||||| ||||||||||| ||||||||||||||    
T  2116856 ctaattttaacctaatttttccctccacacttttacatttaatgtttatctaaagtcaaat 2116796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 160 - 220
Target Start/End: Complemental strand, 2117490 - 2117430
Alignment:
Q  160 ctaattttaacctaattttttcctccacacttttgcatttaatgttgatctaaagtcaaat 220  Q
    |||||||||||||||||||| ||||||||||||||||||||||||| ||||||||| ||||    
T  2117490 ctaattttaacctaatttttccctccacacttttgcatttaatgtttatctaaagtaaaat 2117430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 160 - 220
Target Start/End: Complemental strand, 3758682 - 3758622
Alignment:
Q  160 ctaattttaacctaattttttcctccacacttttgcatttaatgttgatctaaagtcaaat 220  Q
    |||||||||||||||||||| ||||||||||||||||||||||||| ||||||||| ||||    
T  3758682 ctaattttaacctaatttttccctccacacttttgcatttaatgtttatctaaagtaaaat 3758622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 160 - 220
Target Start/End: Complemental strand, 8988496 - 8988436
Alignment:
Q  160 ctaattttaacctaattttttcctccacacttttgcatttaatgttgatctaaagtcaaat 220  Q
    |||||||||||||||||||| ||||||||||||||||||||||||| ||||||||| ||||    
T  8988496 ctaattttaacctaatttttccctccacacttttgcatttaatgtttatctaaagtaaaat 8988436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 160 - 220
Target Start/End: Complemental strand, 20590361 - 20590301
Alignment:
Q  160 ctaattttaacctaattttttcctccacacttttgcatttaatgttgatctaaagtcaaat 220  Q
    |||||||||||||||||||| ||||||||||||||||||||||||| ||||||||| ||||    
T  20590361 ctaattttaacctaatttttccctccacacttttgcatttaatgtttatctaaagtaaaat 20590301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 160 - 220
Target Start/End: Original strand, 24947383 - 24947443
Alignment:
Q  160 ctaattttaacctaattttttcctccacacttttgcatttaatgttgatctaaagtcaaat 220  Q
    |||||||||||||||||||| ||||||||||||||||||||||||| ||||||||| ||||    
T  24947383 ctaattttaacctaatttttccctccacacttttgcatttaatgtttatctaaagtaaaat 24947443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 160 - 220
Target Start/End: Complemental strand, 29713347 - 29713287
Alignment:
Q  160 ctaattttaacctaattttttcctccacacttttgcatttaatgttgatctaaagtcaaat 220  Q
    |||||||||||||||||||| ||||||||||||||||||||||||| ||||||||| ||||    
T  29713347 ctaattttaacctaatttttccctccacacttttgcatttaatgtttatctaaagtaaaat 29713287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 160 - 220
Target Start/End: Complemental strand, 37351396 - 37351336
Alignment:
Q  160 ctaattttaacctaattttttcctccacacttttgcatttaatgttgatctaaagtcaaat 220  Q
    |||||||||||||||||||| ||||||||||||||||||||||||| ||||||||| ||||    
T  37351396 ctaattttaacctaatttttccctccacacttttgcatttaatgtttatctaaagtaaaat 37351336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 160 - 220
Target Start/End: Complemental strand, 43022803 - 43022743
Alignment:
Q  160 ctaattttaacctaattttttcctccacacttttgcatttaatgttgatctaaagtcaaat 220  Q
    |||||||||||||||||||| ||||||||||||||||||||||||| ||||||||| ||||    
T  43022803 ctaattttaacctaatttttccctccacacttttgcatttaatgtttatctaaagtaaaat 43022743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 160 - 220
Target Start/End: Original strand, 47556056 - 47556116
Alignment:
Q  160 ctaattttaacctaattttttcctccacacttttgcatttaatgttgatctaaagtcaaat 220  Q
    |||||||||||||||||||| ||||||||||||||||||||||||| ||||||||| ||||    
T  47556056 ctaattttaacctaatttttccctccacacttttgcatttaatgtttatctaaagtaaaat 47556116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 160 - 220
Target Start/End: Complemental strand, 52801657 - 52801597
Alignment:
Q  160 ctaattttaacctaattttttcctccacacttttgcatttaatgttgatctaaagtcaaat 220  Q
    |||||||||||||||||||| ||||||||||||||||||||||||| ||||||||| ||||    
T  52801657 ctaattttaacctaatttttccctccacacttttgcatttaatgtttatctaaagtaaaat 52801597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 136 - 220
Target Start/End: Complemental strand, 54094276 - 54094192
Alignment:
Q  136 ttaacctgtctcgctatactaaacctaattttaacctaattttttcctccacacttttgcatttaatgttgatctaaagtcaaat 220  Q
    |||||| |||||| |||| | ||| |||||||||||| |||||||||||||||||||||||||||||||| || |||||| ||||    
T  54094276 ttaacccgtctcgttataattaacataattttaaccttattttttcctccacacttttgcatttaatgtttatgtaaagtaaaat 54094192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 161 - 220
Target Start/End: Original strand, 22454166 - 22454225
Alignment:
Q  161 taattttaacctaattttttcctccacacttttgcatttaatgttgatctaaagtcaaat 220  Q
    ||||||||| ||||||||||||||||||||||||||||||||||| ||||||||| ||||    
T  22454166 taattttaatctaattttttcctccacacttttgcatttaatgtttatctaaagtaaaat 22454225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 160 - 213
Target Start/End: Complemental strand, 8531615 - 8531562
Alignment:
Q  160 ctaattttaacctaattttttcctccacacttttgcatttaatgttgatctaaa 213  Q
    |||||||||||||||| ||||||||||||||||||||||||||||| |||||||    
T  8531615 ctaattttaacctaatattttcctccacacttttgcatttaatgtttatctaaa 8531562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 160 - 212
Target Start/End: Complemental strand, 8987231 - 8987179
Alignment:
Q  160 ctaattttaacctaattttttcctccacacttttgcatttaatgttgatctaa 212  Q
    |||||||||||||||||||||||||||||||||| ||||||||||| ||||||    
T  8987231 ctaattttaacctaattttttcctccacacttttacatttaatgtttatctaa 8987179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 160 - 220
Target Start/End: Complemental strand, 8987864 - 8987804
Alignment:
Q  160 ctaattttaacctaattttttcctccacacttttgcatttaatgttgatctaaagtcaaat 220  Q
    |||||||||||||||||||| | ||||||||||||||||||||||| ||||||||| ||||    
T  8987864 ctaattttaacctaatttttccatccacacttttgcatttaatgtttatctaaagtaaaat 8987804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 160 - 220
Target Start/End: Original strand, 12682064 - 12682124
Alignment:
Q  160 ctaattttaacctaattttttcctccacacttttgcatttaatgttgatctaaagtcaaat 220  Q
    |||||||||||||||||||| ||||||||||||| ||||||||||| |||||| |||||||    
T  12682064 ctaattttaacctaatttttccctccacacttttacatttaatgtttatctaaggtcaaat 12682124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 160 - 220
Target Start/End: Original strand, 24944667 - 24944727
Alignment:
Q  160 ctaattttaacctaattttttcctccacacttttgcatttaatgttgatctaaagtcaaat 220  Q
    |||||||||||||||||||| |||||||||||||| |||||||||| ||||||||| ||||    
T  24944667 ctaattttaacctaatttttccctccacacttttgaatttaatgtttatctaaagtaaaat 24944727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 160 - 212
Target Start/End: Complemental strand, 29712729 - 29712677
Alignment:
Q  160 ctaattttaacctaattttttcctccacacttttgcatttaatgttgatctaa 212  Q
    |||||||||||||||||||||||||||||||||| ||||||||||| ||||||    
T  29712729 ctaattttaacctaattttttcctccacacttttacatttaatgtttatctaa 29712677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 160 - 220
Target Start/End: Complemental strand, 37350764 - 37350704
Alignment:
Q  160 ctaattttaacctaattttttcctccacacttttgcatttaatgttgatctaaagtcaaat 220  Q
    |||||||||||||||||||| | ||||||||||||||||||||||| ||||||||| ||||    
T  37350764 ctaattttaacctaatttttccatccacacttttgcatttaatgtttatctaaagtaaaat 37350704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 126 - 202
Target Start/End: Complemental strand, 40682532 - 40682457
Alignment:
Q  126 cttataaagcttaacctgtctcgctatactaaacctaattttaacctaattttttcctccacacttttgcatttaat 202  Q
    ||||||||  |||| | ||||||||||||| ||||||||||||||||||||||| ||| ||||||||||||||||||    
T  40682532 cttataaatgttaatccgtctcgctatacttaacctaattttaacctaatttttccct-cacacttttgcatttaat 40682457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 160 - 212
Target Start/End: Complemental strand, 43022249 - 43022197
Alignment:
Q  160 ctaattttaacctaattttttcctccacacttttgcatttaatgttgatctaa 212  Q
    |||||||||||||||||||||||||||||||||| ||||||||||| ||||||    
T  43022249 ctaattttaacctaattttttcctccacacttttacatttaatgtttatctaa 43022197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 160 - 220
Target Start/End: Complemental strand, 43023320 - 43023260
Alignment:
Q  160 ctaattttaacctaattttttcctccacacttttgcatttaatgttgatctaaagtcaaat 220  Q
    ||||||||||||||||||||  |||||||||||||||||||||||| ||||||||| ||||    
T  43023320 ctaattttaacctaatttttctctccacacttttgcatttaatgtttatctaaagtaaaat 43023260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 160 - 220
Target Start/End: Complemental strand, 49751027 - 49750967
Alignment:
Q  160 ctaattttaacctaattttttcctccacacttttgcatttaatgttgatctaaagtcaaat 220  Q
    ||||||||||||||||||||  |||||||||||||||||||||||| ||||||||| ||||    
T  49751027 ctaattttaacctaatttttctctccacacttttgcatttaatgtttatctaaagtaaaat 49750967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 160 - 212
Target Start/End: Complemental strand, 50033986 - 50033934
Alignment:
Q  160 ctaattttaacctaattttttcctccacacttttgcatttaatgttgatctaa 212  Q
    |||||||||||||||||||||||||||||||||| ||||||||||| ||||||    
T  50033986 ctaattttaacctaattttttcctccacacttttacatttaatgtttatctaa 50033934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 165 - 220
Target Start/End: Original strand, 48809057 - 48809112
Alignment:
Q  165 tttaacctaattttttcctccacacttttgcatttaatgttgatctaaagtcaaat 220  Q
    ||||||||||||||||||||||| ||||||||||||||||| ||||||||| ||||    
T  48809057 tttaacctaattttttcctccacgcttttgcatttaatgtttatctaaagtaaaat 48809112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 166 - 220
Target Start/End: Complemental strand, 54095046 - 54094992
Alignment:
Q  166 ttaacctaattttttcctccacacttttgcatttaatgttgatctaaagtcaaat 220  Q
    |||||||||||||| ||||||||||||||||||||||||| ||||||||| ||||    
T  54095046 ttaacctaatttttccctccacacttttgcatttaatgtttatctaaagtaaaat 54094992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 160 - 205
Target Start/End: Complemental strand, 5754886 - 5754841
Alignment:
Q  160 ctaattttaacctaattttttcctccacacttttgcatttaatgtt 205  Q
    |||||||||||||||||||| |||||||||||||||||||||||||    
T  5754886 ctaattttaacctaatttttccctccacacttttgcatttaatgtt 5754841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 160 - 205
Target Start/End: Complemental strand, 46105721 - 46105676
Alignment:
Q  160 ctaattttaacctaattttttcctccacacttttgcatttaatgtt 205  Q
    |||||||||||||||||||| |||||||||||||||||||||||||    
T  46105721 ctaattttaacctaatttttccctccacacttttgcatttaatgtt 46105676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 160 - 212
Target Start/End: Complemental strand, 17741072 - 17741020
Alignment:
Q  160 ctaattttaacctaattttttcctccacacttttgcatttaatgttgatctaa 212  Q
    |||||||||||||||||||||||||||||||||| || |||||||| ||||||    
T  17741072 ctaattttaacctaattttttcctccacacttttacaattaatgtttatctaa 17741020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 160 - 212
Target Start/End: Complemental strand, 37350131 - 37350079
Alignment:
Q  160 ctaattttaacctaattttttcctccacacttttgcatttaatgttgatctaa 212  Q
    |||||||||||||||||||||||||||||||||| |||||||| || ||||||    
T  37350131 ctaattttaacctaattttttcctccacacttttacatttaatatttatctaa 37350079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 160 - 220
Target Start/End: Complemental strand, 46104931 - 46104871
Alignment:
Q  160 ctaattttaacctaattttttcctccacacttttgcatttaatgttgatctaaagtcaaat 220  Q
    |||||||||||||||||||| |||||| |||||| ||||||||||| |||||| |||||||    
T  46104931 ctaattttaacctaatttttccctccatacttttacatttaatgtttatctaaggtcaaat 46104871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 161 - 220
Target Start/End: Complemental strand, 54094534 - 54094475
Alignment:
Q  161 taattttaacctaattttttcctccacacttttgcatttaatgttgatctaaagtcaaat 220  Q
    |||||||||||| |||| |||| |||||||||||||||||||||| ||||||||| ||||    
T  54094534 taattttaaccttatttgttcccccacacttttgcatttaatgtttatctaaagtaaaat 54094475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 160 - 214
Target Start/End: Original strand, 46420360 - 46420414
Alignment:
Q  160 ctaattttaacctaattttttcctccacacttttgcatttaatgttgatctaaag 214  Q
    ||||||||||||||||||||  ||| |||||||||||||||||||| ||||||||    
T  46420360 ctaattttaacctaatttttctctctacacttttgcatttaatgtttatctaaag 46420414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 160 - 220
Target Start/End: Complemental strand, 24548715 - 24548657
Alignment:
Q  160 ctaattttaacctaattttttcctccacacttttgcatttaatgttgatctaaagtcaaat 220  Q
    |||||||||||||||||||  || |||||||||||||||||||||| ||||||||| ||||    
T  24548715 ctaattttaacctaatttt--cccccacacttttgcatttaatgtttatctaaagtaaaat 24548657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 160 - 205
Target Start/End: Original strand, 24948016 - 24948061
Alignment:
Q  160 ctaattttaacctaattttttcctccacacttttgcatttaatgtt 205  Q
    |||||||||||||||||||| ||||||||||||| |||||||||||    
T  24948016 ctaattttaacctaatttttccctccacacttttacatttaatgtt 24948061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 160 - 205
Target Start/End: Original strand, 47556687 - 47556732
Alignment:
Q  160 ctaattttaacctaattttttcctccacacttttgcatttaatgtt 205  Q
    |||||||||||||||||||| ||||||||||||| |||||||||||    
T  47556687 ctaattttaacctaatttttccctccacacttttacatttaatgtt 47556732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 166 - 215
Target Start/End: Complemental strand, 54094763 - 54094714
Alignment:
Q  166 ttaacctaattttttcctccacacttttgcatttaatgttgatctaaagt 215  Q
    ||||||||||||||  |||||||||||||||||||||||| |||||||||    
T  54094763 ttaacctaatttttcactccacacttttgcatttaatgtttatctaaagt 54094714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 160 - 220
Target Start/End: Original strand, 9888026 - 9888086
Alignment:
Q  160 ctaattttaacctaattttttcctccacacttttgcatttaatgttgatctaaagtcaaat 220  Q
    |||||||||||||||||||| | |||| ||||||| |||||||||| ||||||||| ||||    
T  9888026 ctaattttaacctaatttttccatccatacttttgtatttaatgtttatctaaagtaaaat 9888086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 160 - 212
Target Start/End: Original strand, 9888659 - 9888711
Alignment:
Q  160 ctaattttaacctaattttttcctccacacttttgcatttaatgttgatctaa 212  Q
    ||||||||||||||||||||| ||||| |||||| ||||||||||| ||||||    
T  9888659 ctaattttaacctaatttttttctccagacttttacatttaatgtttatctaa 9888711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 160 - 212
Target Start/End: Original strand, 39714806 - 39714858
Alignment:
Q  160 ctaattttaacctaattttttcctccacacttttgcatttaatgttgatctaa 212  Q
    |||||||||||||||||||| |||||| |||||| ||||||||||| ||||||    
T  39714806 ctaattttaacctaatttttccctccagacttttacatttaatgtttatctaa 39714858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 160 - 220
Target Start/End: Original strand, 49357575 - 49357635
Alignment:
Q  160 ctaattttaacctaattttttcctccacacttttgcatttaatgttgatctaaagtcaaat 220  Q
    ||||||||||||||||||||| |||| ||||||| ||| ||||||| ||||||||| ||||    
T  49357575 ctaattttaacctaatttttttctccgcacttttccatataatgtttatctaaagtaaaat 49357635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 160 - 212
Target Start/End: Complemental strand, 52801024 - 52800972
Alignment:
Q  160 ctaattttaacctaattttttcctccacacttttgcatttaatgttgatctaa 212  Q
    |||||||||||||||||||| |||||| |||||| ||||||||||| ||||||    
T  52801024 ctaattttaacctaatttttccctccagacttttacatttaatgtttatctaa 52800972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 2117473 - 2117430
Alignment:
Q  1 tttccctccacacttttgcatttaatatttatctaaagttaaat 44  Q
    |||||||||||||||||||||||||| |||||||||||| ||||    
T  2117473 tttccctccacacttttgcatttaatgtttatctaaagtaaaat 2117430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 3758665 - 3758622
Alignment:
Q  1 tttccctccacacttttgcatttaatatttatctaaagttaaat 44  Q
    |||||||||||||||||||||||||| |||||||||||| ||||    
T  3758665 tttccctccacacttttgcatttaatgtttatctaaagtaaaat 3758622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 8988479 - 8988436
Alignment:
Q  1 tttccctccacacttttgcatttaatatttatctaaagttaaat 44  Q
    |||||||||||||||||||||||||| |||||||||||| ||||    
T  8988479 tttccctccacacttttgcatttaatgtttatctaaagtaaaat 8988436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 20590344 - 20590301
Alignment:
Q  1 tttccctccacacttttgcatttaatatttatctaaagttaaat 44  Q
    |||||||||||||||||||||||||| |||||||||||| ||||    
T  20590344 tttccctccacacttttgcatttaatgtttatctaaagtaaaat 20590301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 24947400 - 24947443
Alignment:
Q  1 tttccctccacacttttgcatttaatatttatctaaagttaaat 44  Q
    |||||||||||||||||||||||||| |||||||||||| ||||    
T  24947400 tttccctccacacttttgcatttaatgtttatctaaagtaaaat 24947443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 29713330 - 29713287
Alignment:
Q  1 tttccctccacacttttgcatttaatatttatctaaagttaaat 44  Q
    |||||||||||||||||||||||||| |||||||||||| ||||    
T  29713330 tttccctccacacttttgcatttaatgtttatctaaagtaaaat 29713287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 37351379 - 37351336
Alignment:
Q  1 tttccctccacacttttgcatttaatatttatctaaagttaaat 44  Q
    |||||||||||||||||||||||||| |||||||||||| ||||    
T  37351379 tttccctccacacttttgcatttaatgtttatctaaagtaaaat 37351336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 160 - 211
Target Start/End: Original strand, 39405966 - 39406016
Alignment:
Q  160 ctaattttaacctaattttttcctccacacttttgcatttaatgttgatcta 211  Q
    ||||||||||||||||||| |||||||||||||| ||||||||||| |||||    
T  39405966 ctaattttaacctaatttt-tcctccacacttttacatttaatgtttatcta 39406016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 43022786 - 43022743
Alignment:
Q  1 tttccctccacacttttgcatttaatatttatctaaagttaaat 44  Q
    |||||||||||||||||||||||||| |||||||||||| ||||    
T  43022786 tttccctccacacttttgcatttaatgtttatctaaagtaaaat 43022743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 47556073 - 47556116
Alignment:
Q  1 tttccctccacacttttgcatttaatatttatctaaagttaaat 44  Q
    |||||||||||||||||||||||||| |||||||||||| ||||    
T  47556073 tttccctccacacttttgcatttaatgtttatctaaagtaaaat 47556116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 49750647 - 49750604
Alignment:
Q  1 tttccctccacacttttgcatttaatatttatctaaagttaaat 44  Q
    |||||||||||||||||||||||||| |||||||||||| ||||    
T  49750647 tttccctccacacttttgcatttaatgtttatctaaagtaaaat 49750604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 52801640 - 52801597
Alignment:
Q  1 tttccctccacacttttgcatttaatatttatctaaagttaaat 44  Q
    |||||||||||||||||||||||||| |||||||||||| ||||    
T  52801640 tttccctccacacttttgcatttaatgtttatctaaagtaaaat 52801597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 54094635 - 54094592
Alignment:
Q  1 tttccctccacacttttgcatttaatatttatctaaagttaaat 44  Q
    |||||||||||||||||||||||||| |||||||||||| ||||    
T  54094635 tttccctccacacttttgcatttaatgtttatctaaagtaaaat 54094592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 54095035 - 54094992
Alignment:
Q  1 tttccctccacacttttgcatttaatatttatctaaagttaaat 44  Q
    |||||||||||||||||||||||||| |||||||||||| ||||    
T  54095035 tttccctccacacttttgcatttaatgtttatctaaagtaaaat 54094992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 166 - 220
Target Start/End: Original strand, 22454388 - 22454441
Alignment:
Q  166 ttaacctaattttttcctccacacttttgcatttaatgttgatctaaagtcaaat 220  Q
    ||||||||||||||| | |||||||||||||||||||||| ||||||||| ||||    
T  22454388 ttaacctaatttttttc-ccacacttttgcatttaatgtttatctaaagtaaaat 22454441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 160 - 214
Target Start/End: Original strand, 42350842 - 42350896
Alignment:
Q  160 ctaattttaacctaattttttcctccacacttttgcatttaatgttgatctaaag 214  Q
    ||||||||||||||| |||| |||  |||||||||||||||||||| ||||||||    
T  42350842 ctaattttaacctaaattttccctatacacttttgcatttaatgtttatctaaag 42350896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 126 - 220
Target Start/End: Complemental strand, 54093184 - 54093090
Alignment:
Q  126 cttataaagcttaacctgtctcgctatactaaacctaattttaacctaattttttcctccacacttttgcatttaatgttgatctaaagtcaaat 220  Q
    ||||||||  |||| | |||||| |||||| ||| ||||||||||||||||||| ||| |||||||||| |||   |||| ||||||||| ||||    
T  54093184 cttataaatgttaatccgtctcgttatacttaacataattttaacctaatttttcccttcacacttttgaattatttgtttatctaaagtaaaat 54093090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 166 - 220
Target Start/End: Complemental strand, 54093378 - 54093324
Alignment:
Q  166 ttaacctaattttttcctccacacttttgcatttaatgttgatctaaagtcaaat 220  Q
    ||||||||||||||  ||||||||||||||||||||| || ||||||||| ||||    
T  54093378 ttaacctaatttttcactccacacttttgcatttaatctttatctaaagtaaaat 54093324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 171 - 220
Target Start/End: Original strand, 23632870 - 23632919
Alignment:
Q  171 ctaattttttcctccacacttttgcatttaatgttgatctaaagtcaaat 220  Q
    |||||||||||||| ||||||||| |||||||||| ||||||||| ||||    
T  23632870 ctaattttttcctctacacttttgtatttaatgtttatctaaagtaaaat 23632919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 166 - 215
Target Start/End: Complemental strand, 54095152 - 54095103
Alignment:
Q  166 ttaacctaattttttcctccacacttttgcatttaatgttgatctaaagt 215  Q
    ||||||||||||||  ||||| |||||||||||||||||| |||||||||    
T  54095152 ttaacctaatttttcactccatacttttgcatttaatgtttatctaaagt 54095103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 54093250 - 54093214
Alignment:
Q  1 tttccctccacacttttgcatttaatatttatctaaa 37  Q
    |||||||||||||||||||||||||| ||||||||||    
T  54093250 tttccctccacacttttgcatttaatgtttatctaaa 54093214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 2116839 - 2116796
Alignment:
Q  1 tttccctccacacttttgcatttaatatttatctaaagttaaat 44  Q
    ||||||||||||||||| |||||||| |||||||||||| ||||    
T  2116839 tttccctccacacttttacatttaatgtttatctaaagtcaaat 2116796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 8987847 - 8987804
Alignment:
Q  1 tttccctccacacttttgcatttaatatttatctaaagttaaat 44  Q
    ||||| |||||||||||||||||||| |||||||||||| ||||    
T  8987847 tttccatccacacttttgcatttaatgtttatctaaagtaaaat 8987804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 5 - 44
Target Start/End: Original strand, 9061263 - 9061302
Alignment:
Q  5 cctccacacttttgcatttaatatttatctaaagttaaat 44  Q
    |||||||||||||||||||||| |||||||||||| ||||    
T  9061263 cctccacacttttgcatttaatgtttatctaaagtaaaat 9061302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 5 - 44
Target Start/End: Original strand, 22454186 - 22454225
Alignment:
Q  5 cctccacacttttgcatttaatatttatctaaagttaaat 44  Q
    |||||||||||||||||||||| |||||||||||| ||||    
T  22454186 cctccacacttttgcatttaatgtttatctaaagtaaaat 22454225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 24944684 - 24944727
Alignment:
Q  1 tttccctccacacttttgcatttaatatttatctaaagttaaat 44  Q
    |||||||||||||||||| ||||||| |||||||||||| ||||    
T  24944684 tttccctccacacttttgaatttaatgtttatctaaagtaaaat 24944727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 37350747 - 37350704
Alignment:
Q  1 tttccctccacacttttgcatttaatatttatctaaagttaaat 44  Q
    ||||| |||||||||||||||||||| |||||||||||| ||||    
T  37350747 tttccatccacacttttgcatttaatgtttatctaaagtaaaat 37350704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 5 - 44
Target Start/End: Original strand, 39405367 - 39405406
Alignment:
Q  5 cctccacacttttgcatttaatatttatctaaagttaaat 44  Q
    |||||||||||||||||||||| |||||||||||| ||||    
T  39405367 cctccacacttttgcatttaatgtttatctaaagtaaaat 39405406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 5 - 44
Target Start/End: Original strand, 39714150 - 39714189
Alignment:
Q  5 cctccacacttttgcatttaatatttatctaaagttaaat 44  Q
    |||||||||||||||||||||| |||||||||||| ||||    
T  39714150 cctccacacttttgcatttaatgtttatctaaagtaaaat 39714189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 43023303 - 43023260
Alignment:
Q  1 tttccctccacacttttgcatttaatatttatctaaagttaaat 44  Q
    |||| ||||||||||||||||||||| |||||||||||| ||||    
T  43023303 tttctctccacacttttgcatttaatgtttatctaaagtaaaat 43023260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 49751010 - 49750967
Alignment:
Q  1 tttccctccacacttttgcatttaatatttatctaaagttaaat 44  Q
    |||| ||||||||||||||||||||| |||||||||||| ||||    
T  49751010 tttctctccacacttttgcatttaatgtttatctaaagtaaaat 49750967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 5 - 44
Target Start/End: Original strand, 50118721 - 50118760
Alignment:
Q  5 cctccacacttttgcatttaatatttatctaaagttaaat 44  Q
    |||||||||||||||||||||| |||||||||||| ||||    
T  50118721 cctccacacttttgcatttaatgtttatctaaagtaaaat 50118760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 54093367 - 54093324
Alignment:
Q  1 tttccctccacacttttgcatttaatatttatctaaagttaaat 44  Q
    |||| ||||||||||||||||||||| |||||||||||| ||||    
T  54093367 tttcactccacacttttgcatttaatctttatctaaagtaaaat 54093324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 166 - 220
Target Start/End: Original strand, 23633031 - 23633085
Alignment:
Q  166 ttaacctaattttttcctccacacttttgcatttaatgttgatctaaagtcaaat 220  Q
    |||||||||||| | |||||||| |||||||||| ||||| ||||||||| ||||    
T  23633031 ttaacctaatttctccctccacagttttgcattttatgtttatctaaagtgaaat 23633085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #87
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 204
Target Start/End: Complemental strand, 49750833 - 49750756
Alignment:
Q  126 cttataaagcttaacctgtctcgctatactaaacctaattttaacctaattttttcctccacacttttgcatttaatgt 204  Q
    ||||||||  |||| | ||||| ||||||| ||| |||||||||| ||| |||| || |||||||||||||||||||||    
T  49750833 cttataaatgttaatccgtctcactatacttaacataattttaacttaaattttccc-ccacacttttgcatttaatgt 49750756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #88
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 166 - 220
Target Start/End: Complemental strand, 54094362 - 54094309
Alignment:
Q  166 ttaacctaattttttcctccacacttttgcatttaatgttgatctaaagtcaaat 220  Q
    |||||||||||||| |||||| |||||||||| ||||||| ||||||||| ||||    
T  54094362 ttaacctaatttttccctcca-acttttgcatgtaatgtttatctaaagtaaaat 54094309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #89
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 54094752 - 54094714
Alignment:
Q  1 tttccctccacacttttgcatttaatatttatctaaagt 39  Q
    |||| ||||||||||||||||||||| ||||||||||||    
T  54094752 tttcactccacacttttgcatttaatgtttatctaaagt 54094714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #90
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 126 - 167
Target Start/End: Complemental strand, 54095181 - 54095140
Alignment:
Q  126 cttataaagcttaacctgtctcgctatactaaacctaatttt 167  Q
    ||||||||  |||||||||||||||||||| |||||||||||    
T  54095181 cttataaatgttaacctgtctcgctatacttaacctaatttt 54095140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #91
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 37
Target Start/End: Complemental strand, 8531594 - 8531562
Alignment:
Q  5 cctccacacttttgcatttaatatttatctaaa 37  Q
    |||||||||||||||||||||| ||||||||||    
T  8531594 cctccacacttttgcatttaatgtttatctaaa 8531562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #92
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 8 - 44
Target Start/End: Original strand, 22454405 - 22454441
Alignment:
Q  8 ccacacttttgcatttaatatttatctaaagttaaat 44  Q
    ||||||||||||||||||| |||||||||||| ||||    
T  22454405 ccacacttttgcatttaatgtttatctaaagtaaaat 22454441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #93
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 8 - 44
Target Start/End: Complemental strand, 24548693 - 24548657
Alignment:
Q  8 ccacacttttgcatttaatatttatctaaagttaaat 44  Q
    ||||||||||||||||||| |||||||||||| ||||    
T  24548693 ccacacttttgcatttaatgtttatctaaagtaaaat 24548657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #94
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 8 - 44
Target Start/End: Complemental strand, 54094511 - 54094475
Alignment:
Q  8 ccacacttttgcatttaatatttatctaaagttaaat 44  Q
    ||||||||||||||||||| |||||||||||| ||||    
T  54094511 ccacacttttgcatttaatgtttatctaaagtaaaat 54094475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0318 (Bit Score: 58; Significance: 2e-24; HSPs: 2)
Name: scaffold0318
Description:

Target: scaffold0318; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 143 - 220
Target Start/End: Original strand, 6600 - 6677
Alignment:
Q  143 gtctcgctatactaaacctaattttaacctaattttttcctccacacttttgcatttaatgttgatctaaagtcaaat 220  Q
    ||||||||||||| |||||||||||||| |||||||| ||||||||||||||||||||||||| ||||||||| ||||    
T  6600 gtctcgctatacttaacctaattttaacttaatttttccctccacacttttgcatttaatgtttatctaaagtaaaat 6677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0318; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 6634 - 6677
Alignment:
Q  1 tttccctccacacttttgcatttaatatttatctaaagttaaat 44  Q
    |||||||||||||||||||||||||| |||||||||||| ||||    
T  6634 tttccctccacacttttgcatttaatgtttatctaaagtaaaat 6677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 58; Significance: 2e-24; HSPs: 43)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 143 - 220
Target Start/End: Complemental strand, 10129772 - 10129695
Alignment:
Q  143 gtctcgctatactaaacctaattttaacctaattttttcctccacacttttgcatttaatgttgatctaaagtcaaat 220  Q
    ||||||||||||| || |||||||||||||||||||| ||||||||||||||||||||||||| ||||||||| ||||    
T  10129772 gtctcgctatacttaatctaattttaacctaatttttccctccacacttttgcatttaatgtttatctaaagtaaaat 10129695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 145 - 220
Target Start/End: Complemental strand, 25882939 - 25882864
Alignment:
Q  145 ctcgctatactaaacctaattttaacctaattttttcctccacacttttgcatttaatgttgatctaaagtcaaat 220  Q
    ||||||||||| ||| ||||||||||||||||||| ||||||||||||||||||||||||| ||||||||| ||||    
T  25882939 ctcgctatacttaacataattttaacctaatttttccctccacacttttgcatttaatgtttatctaaagtaaaat 25882864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 160 - 220
Target Start/End: Original strand, 1513506 - 1513566
Alignment:
Q  160 ctaattttaacctaattttttcctccacacttttgcatttaatgttgatctaaagtcaaat 220  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||    
T  1513506 ctaattttaacctaattttttcctccacacttttgcatttaatgtttatctaaagtaaaat 1513566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 160 - 220
Target Start/End: Original strand, 4290302 - 4290362
Alignment:
Q  160 ctaattttaacctaattttttcctccacacttttgcatttaatgttgatctaaagtcaaat 220  Q
    |||||||||||||||||||| ||||||||||||||||||||||||| ||||||||| ||||    
T  4290302 ctaattttaacctaatttttccctccacacttttgcatttaatgtttatctaaagtaaaat 4290362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 160 - 220
Target Start/End: Complemental strand, 17837996 - 17837936
Alignment:
Q  160 ctaattttaacctaattttttcctccacacttttgcatttaatgttgatctaaagtcaaat 220  Q
    |||||||||||||||||||| ||||||||||||||||||||||||| ||||||||| ||||    
T  17837996 ctaattttaacctaatttttccctccacacttttgcatttaatgtttatctaaagtaaaat 17837936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 160 - 220
Target Start/End: Original strand, 18091347 - 18091407
Alignment:
Q  160 ctaattttaacctaattttttcctccacacttttgcatttaatgttgatctaaagtcaaat 220  Q
    |||||||||||||||||||| ||||||||||||||||||||||||| ||||||||| ||||    
T  18091347 ctaattttaacctaatttttccctccacacttttgcatttaatgtttatctaaagtaaaat 18091407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 160 - 215
Target Start/End: Complemental strand, 19487568 - 19487513
Alignment:
Q  160 ctaattttaacctaattttttcctccacacttttgcatttaatgttgatctaaagt 215  Q
    |||||||||||||||||||| ||||||||||||||||||||||||| |||||||||    
T  19487568 ctaattttaacctaatttttacctccacacttttgcatttaatgtttatctaaagt 19487513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 161 - 215
Target Start/End: Complemental strand, 28609228 - 28609174
Alignment:
Q  161 taattttaacctaattttttcctccacacttttgcatttaatgttgatctaaagt 215  Q
    ||||||||||||||||||| ||||||||||||||||||||||||| |||||||||    
T  28609228 taattttaacctaatttttccctccacacttttgcatttaatgtttatctaaagt 28609174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 160 - 220
Target Start/End: Complemental strand, 6931427 - 6931367
Alignment:
Q  160 ctaattttaacctaattttttcctccacacttttgcatttaatgttgatctaaagtcaaat 220  Q
    |||||||||||||||||||| ||||||| ||||||||||||||||| ||||||||| ||||    
T  6931427 ctaattttaacctaatttttccctccacgcttttgcatttaatgtttatctaaagtaaaat 6931367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 160 - 220
Target Start/End: Original strand, 9543268 - 9543328
Alignment:
Q  160 ctaattttaacctaattttttcctccacacttttgcatttaatgttgatctaaagtcaaat 220  Q
    |||||||||||||| ||||| ||||||||||||||||||||||||| ||||||||| ||||    
T  9543268 ctaattttaacctattttttccctccacacttttgcatttaatgtttatctaaagtaaaat 9543328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 160 - 220
Target Start/End: Original strand, 19484929 - 19484989
Alignment:
Q  160 ctaattttaacctaattttttcctccacacttttgcatttaatgttgatctaaagtcaaat 220  Q
    |||||||||||||||||||| ||||||||| ||||||||||||||| ||||||||| ||||    
T  19484929 ctaattttaacctaatttttccctccacacctttgcatttaatgtttatctaaagtaaaat 19484989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 167 - 215
Target Start/End: Complemental strand, 25883407 - 25883359
Alignment:
Q  167 taacctaattttttcctccacacttttgcatttaatgttgatctaaagt 215  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||    
T  25883407 taacctaatttttccctccacacttttgcatttaatgttgatctaaagt 25883359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 160 - 220
Target Start/End: Complemental strand, 42781974 - 42781914
Alignment:
Q  160 ctaattttaacctaattttttcctccacacttttgcatttaatgttgatctaaagtcaaat 220  Q
    |||||||||||||||||||| || |||||||||||||||||||||| ||||||||| ||||    
T  42781974 ctaattttaacctaatttttccccccacacttttgcatttaatgtttatctaaagtaaaat 42781914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 182 - 239
Target Start/End: Original strand, 37073227 - 37073284
Alignment:
Q  182 ctccacacttttgcatttaatgttgatctaaagtcaaattatgtttctaattttatgc 239  Q
    |||||||||||||||||||||||| ||||| ||||||||||| |||||||||| ||||    
T  37073227 ctccacacttttgcatttaatgtttatctacagtcaaattatatttctaatttcatgc 37073284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 164 - 220
Target Start/End: Original strand, 10875154 - 10875210
Alignment:
Q  164 ttttaacctaattttttcctccacacttttgcatttaatgttgatctaaagtcaaat 220  Q
    |||||||||||||||| |||||||||||||||| |||||||| ||||||||| ||||    
T  10875154 ttttaacctaatttttccctccacacttttgcaattaatgtttatctaaagtaaaat 10875210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 160 - 212
Target Start/End: Original strand, 18091982 - 18092034
Alignment:
Q  160 ctaattttaacctaattttttcctccacacttttgcatttaatgttgatctaa 212  Q
    |||||||||||||||||||| ||||||||||||| ||||||||||| ||||||    
T  18091982 ctaattttaacctaatttttccctccacacttttacatttaatgtttatctaa 18092034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 160 - 220
Target Start/End: Original strand, 32676277 - 32676337
Alignment:
Q  160 ctaattttaacctaattttttcctccacacttttgcatttaatgttgatctaaagtcaaat 220  Q
    |||||||||||||||||||| |||||||||||||||| |||||||| ||| ||||| ||||    
T  32676277 ctaattttaacctaatttttccctccacacttttgcaattaatgtttatcaaaagtaaaat 32676337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 160 - 212
Target Start/End: Original strand, 32676912 - 32676964
Alignment:
Q  160 ctaattttaacctaattttttcctccacacttttgcatttaatgttgatctaa 212  Q
    |||||||||||||||||||||||||||||||||  ||||||||||| ||||||    
T  32676912 ctaattttaacctaattttttcctccacactttcacatttaatgtttatctaa 32676964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 166 - 220
Target Start/End: Complemental strand, 25883251 - 25883197
Alignment:
Q  166 ttaacctaattttttcctccacacttttgcatttaatgttgatctaaagtcaaat 220  Q
    |||||||||||||||||||||||| ||||||||||||||| || |||||| ||||    
T  25883251 ttaacctaattttttcctccacacatttgcatttaatgtttatttaaagtaaaat 25883197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 37073222 - 37073284
Alignment:
Q  1 tttccctccacacttttgcatttaatatttatctaaagttaaattatattcctaattttatgc 63  Q
    |||| ||||||||||||||||||||| |||||||| ||| |||||||||| ||||||| ||||    
T  37073222 tttctctccacacttttgcatttaatgtttatctacagtcaaattatatttctaatttcatgc 37073284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 160 - 212
Target Start/End: Original strand, 9543901 - 9543953
Alignment:
Q  160 ctaattttaacctaattttttcctccacacttttgcatttaatgttgatctaa 212  Q
    |||||||||||||||||||| |||||| |||||| ||||||||||| ||||||    
T  9543901 ctaattttaacctaatttttccctccagacttttacatttaatgtttatctaa 9543953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 160 - 212
Target Start/End: Original strand, 10048277 - 10048329
Alignment:
Q  160 ctaattttaacctaattttttcctccacacttttgcatttaatgttgatctaa 212  Q
    |||||||||||||||||||| |||||| |||||| ||||||||||| ||||||    
T  10048277 ctaattttaacctaatttttccctccagacttttacatttaatgtttatctaa 10048329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 126 - 178
Target Start/End: Complemental strand, 10129830 - 10129778
Alignment:
Q  126 cttataaagcttaacctgtctcgctatactaaacctaattttaacctaatttt 178  Q
    ||||||||  ||||| |||||||||||||| ||||||||||||||||||||||    
T  10129830 cttataaatgttaacatgtctcgctatacttaacctaattttaacctaatttt 10129778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 160 - 220
Target Start/End: Original strand, 25236014 - 25236074
Alignment:
Q  160 ctaattttaacctaattttttcctccacacttttgcatttaatgttgatctaaagtcaaat 220  Q
    |||||||||||||||||||| | ||||||| ||||||| ||||||| ||||||||| ||||    
T  25236014 ctaattttaacctaatttttccatccacacatttgcatataatgtttatctaaagtaaaat 25236074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 160 - 212
Target Start/End: Complemental strand, 28608610 - 28608558
Alignment:
Q  160 ctaattttaacctaattttttcctccacacttttgcatttaatgttgatctaa 212  Q
    |||||||||||||||||||| |||||| |||||| ||||||||||| ||||||    
T  28608610 ctaattttaacctaatttttccctccagacttttacatttaatgtttatctaa 28608558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 4290319 - 4290362
Alignment:
Q  1 tttccctccacacttttgcatttaatatttatctaaagttaaat 44  Q
    |||||||||||||||||||||||||| |||||||||||| ||||    
T  4290319 tttccctccacacttttgcatttaatgtttatctaaagtaaaat 4290362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 161 - 212
Target Start/End: Original strand, 4290936 - 4290987
Alignment:
Q  161 taattttaacctaattttttcctccacacttttgcatttaatgttgatctaa 212  Q
    ||||||||||||||||||| |||||| |||||| ||||||||||| ||||||    
T  4290936 taattttaacctaatttttccctccagacttttacatttaatgtttatctaa 4290987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 9543285 - 9543328
Alignment:
Q  1 tttccctccacacttttgcatttaatatttatctaaagttaaat 44  Q
    |||||||||||||||||||||||||| |||||||||||| ||||    
T  9543285 tttccctccacacttttgcatttaatgtttatctaaagtaaaat 9543328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 10129738 - 10129695
Alignment:
Q  1 tttccctccacacttttgcatttaatatttatctaaagttaaat 44  Q
    |||||||||||||||||||||||||| |||||||||||| ||||    
T  10129738 tttccctccacacttttgcatttaatgtttatctaaagtaaaat 10129695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 17837979 - 17837936
Alignment:
Q  1 tttccctccacacttttgcatttaatatttatctaaagttaaat 44  Q
    |||||||||||||||||||||||||| |||||||||||| ||||    
T  17837979 tttccctccacacttttgcatttaatgtttatctaaagtaaaat 17837936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 18091364 - 18091407
Alignment:
Q  1 tttccctccacacttttgcatttaatatttatctaaagttaaat 44  Q
    |||||||||||||||||||||||||| |||||||||||| ||||    
T  18091364 tttccctccacacttttgcatttaatgtttatctaaagtaaaat 18091407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 25882907 - 25882864
Alignment:
Q  1 tttccctccacacttttgcatttaatatttatctaaagttaaat 44  Q
    |||||||||||||||||||||||||| |||||||||||| ||||    
T  25882907 tttccctccacacttttgcatttaatgtttatctaaagtaaaat 25882864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 166 - 220
Target Start/End: Complemental strand, 25883094 - 25883040
Alignment:
Q  166 ttaacctaattttttcctccacacttttgcatttaatgttgatctaaagtcaaat 220  Q
    |||||||||||||| ||||||||  ||||||||||||||| ||||||||| ||||    
T  25883094 ttaacctaatttttccctccacatgtttgcatttaatgtttatctaaagtaaaat 25883040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 28609212 - 28609174
Alignment:
Q  1 tttccctccacacttttgcatttaatatttatctaaagt 39  Q
    |||||||||||||||||||||||||| ||||||||||||    
T  28609212 tttccctccacacttttgcatttaatgtttatctaaagt 28609174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 5 - 44
Target Start/End: Original strand, 1513527 - 1513566
Alignment:
Q  5 cctccacacttttgcatttaatatttatctaaagttaaat 44  Q
    |||||||||||||||||||||| |||||||||||| ||||    
T  1513527 cctccacacttttgcatttaatgtttatctaaagtaaaat 1513566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 6931410 - 6931367
Alignment:
Q  1 tttccctccacacttttgcatttaatatttatctaaagttaaat 44  Q
    ||||||||||| |||||||||||||| |||||||||||| ||||    
T  6931410 tttccctccacgcttttgcatttaatgtttatctaaagtaaaat 6931367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 10875167 - 10875210
Alignment:
Q  1 tttccctccacacttttgcatttaatatttatctaaagttaaat 44  Q
    |||||||||||||||||||| ||||| |||||||||||| ||||    
T  10875167 tttccctccacacttttgcaattaatgtttatctaaagtaaaat 10875210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 19484946 - 19484989
Alignment:
Q  1 tttccctccacacttttgcatttaatatttatctaaagttaaat 44  Q
    ||||||||||||| |||||||||||| |||||||||||| ||||    
T  19484946 tttccctccacacctttgcatttaatgtttatctaaagtaaaat 19484989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 42781957 - 42781914
Alignment:
Q  1 tttccctccacacttttgcatttaatatttatctaaagttaaat 44  Q
    |||||| ||||||||||||||||||| |||||||||||| ||||    
T  42781957 tttccccccacacttttgcatttaatgtttatctaaagtaaaat 42781914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 39
Target Start/End: Complemental strand, 19487547 - 19487513
Alignment:
Q  5 cctccacacttttgcatttaatatttatctaaagt 39  Q
    |||||||||||||||||||||| ||||||||||||    
T  19487547 cctccacacttttgcatttaatgtttatctaaagt 19487513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 166 - 220
Target Start/End: Original strand, 25236237 - 25236290
Alignment:
Q  166 ttaacctaattttttcctccacacttttgcatttaatgttgatctaaagtcaaat 220  Q
    ||||||||||||| ||||| | |||||||||||||||||| ||||||||| ||||    
T  25236237 ttaacctaattttctcctc-atacttttgcatttaatgtttatctaaagtaaaat 25236290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 25883397 - 25883359
Alignment:
Q  1 tttccctccacacttttgcatttaatatttatctaaagt 39  Q
    |||||||||||||||||||||||||| || |||||||||    
T  25883397 tttccctccacacttttgcatttaatgttgatctaaagt 25883359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 160 - 212
Target Start/End: Original strand, 1514234 - 1514286
Alignment:
Q  160 ctaattttaacctaattttttcctccacacttttgcatttaatgttgatctaa 212  Q
    ||||||||||||||| ||||  | |||||||||| ||||||||||| ||||||    
T  1514234 ctaattttaacctaaattttctcgccacacttttacatttaatgtttatctaa 1514286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0210 (Bit Score: 55; Significance: 1e-22; HSPs: 4)
Name: scaffold0210
Description:

Target: scaffold0210; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 126 - 220
Target Start/End: Original strand, 17524 - 17618
Alignment:
Q  126 cttataaagcttaacctgtctcgctatactaaacctaattttaacctaattttttcctccacacttttgcatttaatgttgatctaaagtcaaat 220  Q
    ||||||||  |||||| ||||||||||||| |||| |||||||||||| | ||| ||||||||||||||||||||||||| ||||||||| ||||    
T  17524 cttataaatgttaacccgtctcgctatacttaacccaattttaacctattgtttccctccacacttttgcatttaatgtttatctaaagtaaaat 17618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0210; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 136 - 220
Target Start/End: Original strand, 17366 - 17450
Alignment:
Q  136 ttaacctgtctcgctatactaaacctaattttaacctaattttttcctccacacttttgcatttaatgttgatctaaagtcaaat 220  Q
    |||||| ||||||||||||| |||||||||||||| || | ||| ||||||||||||||||||||||||| ||||||||| ||||    
T  17366 ttaacccgtctcgctatacttaacctaattttaacatattgtttccctccacacttttgcatttaatgtttatctaaagtaaaat 17450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0210; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 17407 - 17450
Alignment:
Q  1 tttccctccacacttttgcatttaatatttatctaaagttaaat 44  Q
    |||||||||||||||||||||||||| |||||||||||| ||||    
T  17407 tttccctccacacttttgcatttaatgtttatctaaagtaaaat 17450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0210; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 17575 - 17618
Alignment:
Q  1 tttccctccacacttttgcatttaatatttatctaaagttaaat 44  Q
    |||||||||||||||||||||||||| |||||||||||| ||||    
T  17575 tttccctccacacttttgcatttaatgtttatctaaagtaaaat 17618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 54; Significance: 4e-22; HSPs: 65)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 143 - 220
Target Start/End: Original strand, 50290040 - 50290117
Alignment:
Q  143 gtctcgctatactaaacctaattttaacctaattttttcctccacacttttgcatttaatgttgatctaaagtcaaat 220  Q
    ||||||||||| | |||||||||||||| |||||||| ||||||||||||||||||||||||| ||||||||| ||||    
T  50290040 gtctcgctatagttaacctaattttaacttaatttttccctccacacttttgcatttaatgtttatctaaagtaaaat 50290117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 126 - 220
Target Start/End: Complemental strand, 39268651 - 39268558
Alignment:
Q  126 cttataaagcttaacctgtctcgctatactaaacctaattttaacctaattttttcctccacacttttgcatttaatgttgatctaaagtcaaat 220  Q
    ||||||||  |||| | ||||||||||||  |||| |||||||||||||||||| ||||||||||||||||||||||||| ||||||||| ||||    
T  39268651 cttataaacgttaatccgtctcgctatacgtaacccaattttaacctaattttt-cctccacacttttgcatttaatgtttatctaaagtaaaat 39268558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 160 - 220
Target Start/End: Complemental strand, 1827743 - 1827683
Alignment:
Q  160 ctaattttaacctaattttttcctccacacttttgcatttaatgttgatctaaagtcaaat 220  Q
    |||||||||||||||||||| ||||||||||||||||||||||||| ||||||||| ||||    
T  1827743 ctaattttaacctaatttttccctccacacttttgcatttaatgtttatctaaagtaaaat 1827683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 160 - 220
Target Start/End: Complemental strand, 4892733 - 4892673
Alignment:
Q  160 ctaattttaacctaattttttcctccacacttttgcatttaatgttgatctaaagtcaaat 220  Q
    |||||||||||||||||||| ||||||||||||||||||||||||| ||||||||| ||||    
T  4892733 ctaattttaacctaatttttccctccacacttttgcatttaatgtttatctaaagtaaaat 4892673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 160 - 220
Target Start/End: Complemental strand, 5426992 - 5426932
Alignment:
Q  160 ctaattttaacctaattttttcctccacacttttgcatttaatgttgatctaaagtcaaat 220  Q
    |||||||||||||||||||| ||||||||||||| ||||||||||| ||||||||||||||    
T  5426992 ctaattttaacctaatttttccctccacacttttacatttaatgtttatctaaagtcaaat 5426932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 160 - 220
Target Start/End: Complemental strand, 5427614 - 5427554
Alignment:
Q  160 ctaattttaacctaattttttcctccacacttttgcatttaatgttgatctaaagtcaaat 220  Q
    |||||||||||||||||||| ||||||||||||||||||||||||| ||||||||| ||||    
T  5427614 ctaattttaacctaatttttccctccacacttttgcatttaatgtttatctaaagtaaaat 5427554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 160 - 220
Target Start/End: Complemental strand, 16301581 - 16301521
Alignment:
Q  160 ctaattttaacctaattttttcctccacacttttgcatttaatgttgatctaaagtcaaat 220  Q
    |||||||||||||||||||| ||||||||||||||||||||||||| ||||||||| ||||    
T  16301581 ctaattttaacctaatttttccctccacacttttgcatttaatgtttatctaaagttaaat 16301521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 160 - 220
Target Start/End: Original strand, 19321053 - 19321113
Alignment:
Q  160 ctaattttaacctaattttttcctccacacttttgcatttaatgttgatctaaagtcaaat 220  Q
    |||||||||||||||||||| ||||||||||||||||||||||||| ||||||||| ||||    
T  19321053 ctaattttaacctaatttttccctccacacttttgcatttaatgtttatctaaagtaaaat 19321113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 160 - 220
Target Start/End: Original strand, 22198000 - 22198060
Alignment:
Q  160 ctaattttaacctaattttttcctccacacttttgcatttaatgttgatctaaagtcaaat 220  Q
    |||||||||||||||||||| ||||||||||||||||||||||||| ||||||||| ||||    
T  22198000 ctaattttaacctaatttttccctccacacttttgcatttaatgtttatctaaagtaaaat 22198060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 160 - 220
Target Start/End: Complemental strand, 28572441 - 28572381
Alignment:
Q  160 ctaattttaacctaattttttcctccacacttttgcatttaatgttgatctaaagtcaaat 220  Q
    |||||||||||||||||||| ||||||||||||||||||||||||| ||||||||| ||||    
T  28572441 ctaattttaacctaatttttccctccacacttttgcatttaatgtttatctaaagtaaaat 28572381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 160 - 220
Target Start/End: Original strand, 29185754 - 29185814
Alignment:
Q  160 ctaattttaacctaattttttcctccacacttttgcatttaatgttgatctaaagtcaaat 220  Q
    |||||||||||||||||||| ||||||||||||||||||||||||| ||||||||| ||||    
T  29185754 ctaattttaacctaatttttccctccacacttttgcatttaatgtttatctaaagtaaaat 29185814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 160 - 220
Target Start/End: Original strand, 33074751 - 33074811
Alignment:
Q  160 ctaattttaacctaattttttcctccacacttttgcatttaatgttgatctaaagtcaaat 220  Q
    |||||||||||||||||||| ||||||||||||||||||||||||| ||||||||| ||||    
T  33074751 ctaattttaacctaatttttccctccacacttttgcatttaatgtttatctaaagtaaaat 33074811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 160 - 220
Target Start/End: Complemental strand, 33362336 - 33362276
Alignment:
Q  160 ctaattttaacctaattttttcctccacacttttgcatttaatgttgatctaaagtcaaat 220  Q
    |||||||||||||||||||| ||||||||||||||||||||||||| ||||||||| ||||    
T  33362336 ctaattttaacctaatttttccctccacacttttgcatttaatgtttatctaaagtaaaat 33362276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 160 - 220
Target Start/End: Complemental strand, 38896113 - 38896053
Alignment:
Q  160 ctaattttaacctaattttttcctccacacttttgcatttaatgttgatctaaagtcaaat 220  Q
    |||||||||||||||||||| ||||||||||||||||||||||||| ||||||||| ||||    
T  38896113 ctaattttaacctaatttttccctccacacttttgcatttaatgtttatctaaagtaaaat 38896053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 160 - 220
Target Start/End: Complemental strand, 45914384 - 45914324
Alignment:
Q  160 ctaattttaacctaattttttcctccacacttttgcatttaatgttgatctaaagtcaaat 220  Q
    |||||||||||||||||||| ||||||||||||||||||||||||| ||||||||| ||||    
T  45914384 ctaattttaacctaatttttccctccacacttttgcatttaatgtttatctaaagtaaaat 45914324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 160 - 220
Target Start/End: Original strand, 46624115 - 46624175
Alignment:
Q  160 ctaattttaacctaattttttcctccacacttttgcatttaatgttgatctaaagtcaaat 220  Q
    |||||||||| ||||||||||||||||||||||||||||||||||| ||||||||| ||||    
T  46624115 ctaattttaatctaattttttcctccacacttttgcatttaatgtttatctaaagtaaaat 46624175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 160 - 220
Target Start/End: Complemental strand, 52311477 - 52311417
Alignment:
Q  160 ctaattttaacctaattttttcctccacacttttgcatttaatgttgatctaaagtcaaat 220  Q
    |||||||||||||||||||| ||||||||||||||||||||||||| ||||||||| ||||    
T  52311477 ctaattttaacctaatttttccctccacacttttgcatttaatgtttatctaaagtaaaat 52311417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 177 - 239
Target Start/End: Original strand, 8998523 - 8998585
Alignment:
Q  177 ttttcctccacacttttgcatttaatgttgatctaaagtcaaattatgtttctaattttatgc 239  Q
    ||||||||||||||||||||||||||||| ||||| ||||||||| |||||||||||| ||||    
T  8998523 ttttcctccacacttttgcatttaatgtttatctacagtcaaattgtgtttctaatttcatgc 8998585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 162 - 220
Target Start/End: Original strand, 50278162 - 50278220
Alignment:
Q  162 aattttaacctaattttttcctccacacttttgcatttaatgttgatctaaagtcaaat 220  Q
    |||||||||||||||||| ||||||||||||||||||||||||| ||||||||| ||||    
T  50278162 aattttaacctaatttttccctccacacttttgcatttaatgtttatctaaagtaaaat 50278220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 160 - 212
Target Start/End: Complemental strand, 1827117 - 1827065
Alignment:
Q  160 ctaattttaacctaattttttcctccacacttttgcatttaatgttgatctaa 212  Q
    |||||||||||||||||||||||||||||||||| ||||||||||| ||||||    
T  1827117 ctaattttaacctaattttttcctccacacttttacatttaatgtttatctaa 1827065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 160 - 220
Target Start/End: Complemental strand, 16301059 - 16300999
Alignment:
Q  160 ctaattttaacctaattttttcctccacacttttgcatttaatgttgatctaaagtcaaat 220  Q
    |||||||||||||||||||| ||||||||||||| ||||||||||| |||||| |||||||    
T  16301059 ctaattttaacctaatttttccctccacacttttacatttaatgtttatctaaggtcaaat 16300999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 160 - 212
Target Start/End: Complemental strand, 28571065 - 28571013
Alignment:
Q  160 ctaattttaacctaattttttcctccacacttttgcatttaatgttgatctaa 212  Q
    |||||||||||||||||||||||||||||||||| ||||||||||| ||||||    
T  28571065 ctaattttaacctaattttttcctccacacttttacatttaatgtttatctaa 28571013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 160 - 212
Target Start/End: Original strand, 33075383 - 33075435
Alignment:
Q  160 ctaattttaacctaattttttcctccacacttttgcatttaatgttgatctaa 212  Q
    |||||||||||||||||||||||||||||||||| ||||||||||| ||||||    
T  33075383 ctaattttaacctaattttttcctccacacttttacatttaatgtttatctaa 33075435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 126 - 220
Target Start/End: Complemental strand, 39268752 - 39268658
Alignment:
Q  126 cttataaagcttaacctgtctcgctatactaaacctaattttaacctaattttttcctccacacttttgcatttaatgttgatctaaagtcaaat 220  Q
    ||||||||  |||||  |||| |||||| | || |||||||||||||||||||   |||||||||||||||||||||||| ||||||||| ||||    
T  39268752 cttataaatgttaacgcgtcttgctatatttaaactaattttaacctaattttcctctccacacttttgcatttaatgtttatctaaagtaaaat 39268658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 181 - 239
Target Start/End: Complemental strand, 49193499 - 49193441
Alignment:
Q  181 cctccacacttttgcatttaatgttgatctaaagtcaaattatgtttctaattttatgc 239  Q
    |||||| |||||||||||||||||| ||||| |||||||||||||||||||||| ||||    
T  49193499 cctccatacttttgcatttaatgtttatctacagtcaaattatgtttctaatttcatgc 49193441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 162 - 220
Target Start/End: Original strand, 50289830 - 50289888
Alignment:
Q  162 aattttaacctaattttttcctccacacttttgcatttaatgttgatctaaagtcaaat 220  Q
    |||||||||||||||||| ||||||||||||||||||||||||| || |||||| ||||    
T  50289830 aattttaacctaatttttccctccacacttttgcatttaatgtttatataaagtaaaat 50289888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 160 - 213
Target Start/End: Original strand, 43991497 - 43991550
Alignment:
Q  160 ctaattttaacctaattttttcctccacacttttgcatttaatgttgatctaaa 213  Q
    |||||||||||||||||||| |||||||||||||||||||||| || |||||||    
T  43991497 ctaattttaacctaatttttccctccacacttttgcatttaatatttatctaaa 43991550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 160 - 212
Target Start/End: Original strand, 22198632 - 22198684
Alignment:
Q  160 ctaattttaacctaattttttcctccacacttttgcatttaatgttgatctaa 212  Q
    ||||||||||||||||||||||||||||| |||| ||||||||||| ||||||    
T  22198632 ctaattttaacctaattttttcctccacatttttacatttaatgtttatctaa 22198684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 160 - 220
Target Start/End: Complemental strand, 28571698 - 28571638
Alignment:
Q  160 ctaattttaacctaattttttcctccacacttttgcatttaatgttgatctaaagtcaaat 220  Q
    |||||||||||||||||||| | |||| |||||||||||||||||| ||||||||| ||||    
T  28571698 ctaattttaacctaatttttccatccatacttttgcatttaatgtttatctaaagtaaaat 28571638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 160 - 220
Target Start/End: Complemental strand, 28947326 - 28947266
Alignment:
Q  160 ctaattttaacctaattttttcctccacacttttgcatttaatgttgatctaaagtcaaat 220  Q
    |||||||||||||||||||| ||||||||||||||||| |||| || ||||||||| ||||    
T  28947326 ctaattttaacctaatttttccctccacacttttgcatataatcttcatctaaagtaaaat 28947266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 160 - 220
Target Start/End: Complemental strand, 47137156 - 47137096
Alignment:
Q  160 ctaattttaacctaattttttcctccacacttttgcatttaatgttgatctaaagtcaaat 220  Q
    |||||||||| || |||||| ||||||||||||||||||||||||| ||||||||| ||||    
T  47137156 ctaattttaaactgatttttccctccacacttttgcatttaatgtttatctaaagtaaaat 47137096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 16301564 - 16301521
Alignment:
Q  1 tttccctccacacttttgcatttaatatttatctaaagttaaat 44  Q
    |||||||||||||||||||||||||| |||||||||||||||||    
T  16301564 tttccctccacacttttgcatttaatgtttatctaaagttaaat 16301521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 126 - 191
Target Start/End: Complemental strand, 50562782 - 50562717
Alignment:
Q  126 cttataaagcttaacctgtctcgctatactaaacctaattttaacctaattttttcctccacactt 191  Q
    ||||||||  |||| | ||||||||||||| |||||||||||||||||| |||| |||||||||||    
T  50562782 cttataaatgttaatccgtctcgctatacttaacctaattttaacctaacttttccctccacactt 50562717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 160 - 212
Target Start/End: Complemental strand, 4892100 - 4892048
Alignment:
Q  160 ctaattttaacctaattttttcctccacacttttgcatttaatgttgatctaa 212  Q
    |||||||||||||||||||| |||||| |||||| ||||||||||| ||||||    
T  4892100 ctaattttaacctaatttttccctccagacttttacatttaatgtttatctaa 4892048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 160 - 212
Target Start/End: Original strand, 29186387 - 29186439
Alignment:
Q  160 ctaattttaacctaattttttcctccacacttttgcatttaatgttgatctaa 212  Q
    |||||||||||||||||||| |||||| |||||| ||||||||||| ||||||    
T  29186387 ctaattttaacctaatttttccctccagacttttacatttaatgtttatctaa 29186439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 160 - 212
Target Start/End: Complemental strand, 33361703 - 33361651
Alignment:
Q  160 ctaattttaacctaattttttcctccacacttttgcatttaatgttgatctaa 212  Q
    |||||||||||||||||||| |||||| |||||| ||||||||||| ||||||    
T  33361703 ctaattttaacctaatttttccctccagacttttacatttaatgtttatctaa 33361651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 43991514 - 43991550
Alignment:
Q  1 tttccctccacacttttgcatttaatatttatctaaa 37  Q
    |||||||||||||||||||||||||||||||||||||    
T  43991514 tttccctccacacttttgcatttaatatttatctaaa 43991550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 160 - 212
Target Start/End: Complemental strand, 50562064 - 50562012
Alignment:
Q  160 ctaattttaacctaattttttcctccacacttttgcatttaatgttgatctaa 212  Q
    ||||||||||||||||||||  |||||||||||| ||||||||||| ||||||    
T  50562064 ctaattttaacctaatttttctctccacacttttacatttaatgtttatctaa 50562012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 160 - 220
Target Start/End: Complemental strand, 50562696 - 50562636
Alignment:
Q  160 ctaattttaacctaattttttcctccacacttttgcatttaatgttgatctaaagtcaaat 220  Q
    |||||||||||||||||||| ||||||||||||   |||||||||| ||||||||| ||||    
T  50562696 ctaattttaacctaatttttccctccacactttaatatttaatgtttatctaaagtaaaat 50562636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 160 - 212
Target Start/End: Original strand, 51965094 - 51965146
Alignment:
Q  160 ctaattttaacctaattttttcctccacacttttgcatttaatgttgatctaa 212  Q
    ||||||||||| |||||||| ||||||||||||| ||||||||||| ||||||    
T  51965094 ctaattttaacataatttttccctccacacttttacatttaatgtttatctaa 51965146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 1827726 - 1827683
Alignment:
Q  1 tttccctccacacttttgcatttaatatttatctaaagttaaat 44  Q
    |||||||||||||||||||||||||| |||||||||||| ||||    
T  1827726 tttccctccacacttttgcatttaatgtttatctaaagtaaaat 1827683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 4892716 - 4892673
Alignment:
Q  1 tttccctccacacttttgcatttaatatttatctaaagttaaat 44  Q
    |||||||||||||||||||||||||| |||||||||||| ||||    
T  4892716 tttccctccacacttttgcatttaatgtttatctaaagtaaaat 4892673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 5427597 - 5427554
Alignment:
Q  1 tttccctccacacttttgcatttaatatttatctaaagttaaat 44  Q
    |||||||||||||||||||||||||| |||||||||||| ||||    
T  5427597 tttccctccacacttttgcatttaatgtttatctaaagtaaaat 5427554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 19321070 - 19321113
Alignment:
Q  1 tttccctccacacttttgcatttaatatttatctaaagttaaat 44  Q
    |||||||||||||||||||||||||| |||||||||||| ||||    
T  19321070 tttccctccacacttttgcatttaatgtttatctaaagtaaaat 19321113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 22198017 - 22198060
Alignment:
Q  1 tttccctccacacttttgcatttaatatttatctaaagttaaat 44  Q
    |||||||||||||||||||||||||| |||||||||||| ||||    
T  22198017 tttccctccacacttttgcatttaatgtttatctaaagtaaaat 22198060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 28572424 - 28572381
Alignment:
Q  1 tttccctccacacttttgcatttaatatttatctaaagttaaat 44  Q
    |||||||||||||||||||||||||| |||||||||||| ||||    
T  28572424 tttccctccacacttttgcatttaatgtttatctaaagtaaaat 28572381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 29185771 - 29185814
Alignment:
Q  1 tttccctccacacttttgcatttaatatttatctaaagttaaat 44  Q
    |||||||||||||||||||||||||| |||||||||||| ||||    
T  29185771 tttccctccacacttttgcatttaatgtttatctaaagtaaaat 29185814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 33074768 - 33074811
Alignment:
Q  1 tttccctccacacttttgcatttaatatttatctaaagttaaat 44  Q
    |||||||||||||||||||||||||| |||||||||||| ||||    
T  33074768 tttccctccacacttttgcatttaatgtttatctaaagtaaaat 33074811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 33362319 - 33362276
Alignment:
Q  1 tttccctccacacttttgcatttaatatttatctaaagttaaat 44  Q
    |||||||||||||||||||||||||| |||||||||||| ||||    
T  33362319 tttccctccacacttttgcatttaatgtttatctaaagtaaaat 33362276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 38896096 - 38896053
Alignment:
Q  1 tttccctccacacttttgcatttaatatttatctaaagttaaat 44  Q
    |||||||||||||||||||||||||| |||||||||||| ||||    
T  38896096 tttccctccacacttttgcatttaatgtttatctaaagtaaaat 38896053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 45914367 - 45914324
Alignment:
Q  1 tttccctccacacttttgcatttaatatttatctaaagttaaat 44  Q
    |||||||||||||||||||||||||| |||||||||||| ||||    
T  45914367 tttccctccacacttttgcatttaatgtttatctaaagtaaaat 45914324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 47137139 - 47137096
Alignment:
Q  1 tttccctccacacttttgcatttaatatttatctaaagttaaat 44  Q
    |||||||||||||||||||||||||| |||||||||||| ||||    
T  47137139 tttccctccacacttttgcatttaatgtttatctaaagtaaaat 47137096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 50278177 - 50278220
Alignment:
Q  1 tttccctccacacttttgcatttaatatttatctaaagttaaat 44  Q
    |||||||||||||||||||||||||| |||||||||||| ||||    
T  50278177 tttccctccacacttttgcatttaatgtttatctaaagtaaaat 50278220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 50290074 - 50290117
Alignment:
Q  1 tttccctccacacttttgcatttaatatttatctaaagttaaat 44  Q
    |||||||||||||||||||||||||| |||||||||||| ||||    
T  50290074 tttccctccacacttttgcatttaatgtttatctaaagtaaaat 50290117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 52311460 - 52311417
Alignment:
Q  1 tttccctccacacttttgcatttaatatttatctaaagttaaat 44  Q
    |||||||||||||||||||||||||| |||||||||||| ||||    
T  52311460 tttccctccacacttttgcatttaatgtttatctaaagtaaaat 52311417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 166 - 220
Target Start/End: Complemental strand, 21008083 - 21008029
Alignment:
Q  166 ttaacctaattttttcctccacacttttgcatttaatgttgatctaaagtcaaat 220  Q
    |||||||||||||| ||||||| ||||||||||||||||| |||| |||| ||||    
T  21008083 ttaacctaatttttccctccacgcttttgcatttaatgtttatctgaagtaaaat 21008029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 49193503 - 49193441
Alignment:
Q  1 tttccctccacacttttgcatttaatatttatctaaagttaaattatattcctaattttatgc 63  Q
    |||||||||| ||||||||||||||| |||||||| ||| ||||||| || ||||||| ||||    
T  49193503 tttccctccatacttttgcatttaatgtttatctacagtcaaattatgtttctaatttcatgc 49193441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 160 - 212
Target Start/End: Complemental strand, 52310851 - 52310799
Alignment:
Q  160 ctaattttaacctaattttttcctccacacttttgcatttaatgttgatctaa 212  Q
    ||||| |||||||||||||| ||||||||||||| ||||| ||||| ||||||    
T  52310851 ctaatgttaacctaatttttccctccacacttttacatttcatgtttatctaa 52310799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 5426975 - 5426932
Alignment:
Q  1 tttccctccacacttttgcatttaatatttatctaaagttaaat 44  Q
    ||||||||||||||||| |||||||| |||||||||||| ||||    
T  5426975 tttccctccacacttttacatttaatgtttatctaaagtcaaat 5426932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 5 - 44
Target Start/End: Complemental strand, 39268597 - 39268558
Alignment:
Q  5 cctccacacttttgcatttaatatttatctaaagttaaat 44  Q
    |||||||||||||||||||||| |||||||||||| ||||    
T  39268597 cctccacacttttgcatttaatgtttatctaaagtaaaat 39268558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 5 - 44
Target Start/End: Original strand, 46624136 - 46624175
Alignment:
Q  5 cctccacacttttgcatttaatatttatctaaagttaaat 44  Q
    |||||||||||||||||||||| |||||||||||| ||||    
T  46624136 cctccacacttttgcatttaatgtttatctaaagtaaaat 46624175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 50289845 - 50289888
Alignment:
Q  1 tttccctccacacttttgcatttaatatttatctaaagttaaat 44  Q
    |||||||||||||||||||||||||| ||||| |||||| ||||    
T  50289845 tttccctccacacttttgcatttaatgtttatataaagtaaaat 50289888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 63
Target Start/End: Original strand, 8998527 - 8998585
Alignment:
Q  5 cctccacacttttgcatttaatatttatctaaagttaaattatattcctaattttatgc 63  Q
    |||||||||||||||||||||| |||||||| ||| ||||| | || ||||||| ||||    
T  8998527 cctccacacttttgcatttaatgtttatctacagtcaaattgtgtttctaatttcatgc 8998585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 213
Target Start/End: Complemental strand, 32575628 - 32575586
Alignment:
Q  171 ctaattttttcctccacacttttgcatttaatgttgatctaaa 213  Q
    |||||||||||||| ||||||||| |||||||||| |||||||    
T  32575628 ctaattttttcctctacacttttgtatttaatgtttatctaaa 32575586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 44
Target Start/End: Complemental strand, 39268696 - 39268658
Alignment:
Q  6 ctccacacttttgcatttaatatttatctaaagttaaat 44  Q
    ||||||||||||||||||||| |||||||||||| ||||    
T  39268696 ctccacacttttgcatttaatgtttatctaaagtaaaat 39268658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 53; Significance: 2e-21; HSPs: 51)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 160 - 220
Target Start/End: Complemental strand, 35856192 - 35856132
Alignment:
Q  160 ctaattttaacctaattttttcctccacacttttgcatttaatgttgatctaaagtcaaat 220  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||    
T  35856192 ctaattttaacctaattttttcctccacacttttgcatttaatgtttatctaaagtaaaat 35856132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 160 - 220
Target Start/End: Complemental strand, 9764642 - 9764582
Alignment:
Q  160 ctaattttaacctaattttttcctccacacttttgcatttaatgttgatctaaagtcaaat 220  Q
    |||||||||||||||||||| ||||||||||||||||||||||||| ||||||||| ||||    
T  9764642 ctaattttaacctaatttttccctccacacttttgcatttaatgtttatctaaagtaaaat 9764582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 149 - 213
Target Start/End: Original strand, 13495559 - 13495623
Alignment:
Q  149 ctatactaaacctaattttaacctaattttttcctccacacttttgcatttaatgttgatctaaa 213  Q
    ||||||| |||||||||| |||||||||||| ||||||||||||||||||||||||| |||||||    
T  13495559 ctatacttaacctaatttaaacctaatttttccctccacacttttgcatttaatgtttatctaaa 13495623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 160 - 220
Target Start/End: Original strand, 26777178 - 26777238
Alignment:
Q  160 ctaattttaacctaattttttcctccacacttttgcatttaatgttgatctaaagtcaaat 220  Q
    |||||||||||||||||||||||||||||||||| ||||||||||| |||||| |||||||    
T  26777178 ctaattttaacctaattttttcctccacacttttacatttaatgtttatctaaggtcaaat 26777238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 126 - 213
Target Start/End: Original strand, 11586017 - 11586104
Alignment:
Q  126 cttataaagcttaacctgtctcgctatactaaacctaattttaacctaattttttcctccacacttttgcatttaatgttgatctaaa 213  Q
    ||||||||  |||||  |||||| |||||| ||||||||||||||||||||||| ||||||||||||| |||||||| || |||||||    
T  11586017 cttataaatgttaactcgtctcgttatacttaacctaattttaacctaatttttccctccacacttttacatttaatatttatctaaa 11586104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 160 - 215
Target Start/End: Original strand, 29529494 - 29529549
Alignment:
Q  160 ctaattttaacctaattttttcctccacacttttgcatttaatgttgatctaaagt 215  Q
    |||||||||||||||||||| ||||||||||||||||||||||||| |||||||||    
T  29529494 ctaattttaacctaatttttccctccacacttttgcatttaatgtttatctaaagt 29529549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 160 - 220
Target Start/End: Complemental strand, 9772877 - 9772817
Alignment:
Q  160 ctaattttaacctaattttttcctccacacttttgcatttaatgttgatctaaagtcaaat 220  Q
    |||||||||||||||||||| |||||| |||||||||||||||||| ||||||||| ||||    
T  9772877 ctaattttaacctaatttttccctccaaacttttgcatttaatgtttatctaaagtaaaat 9772817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 160 - 220
Target Start/End: Original strand, 55291137 - 55291197
Alignment:
Q  160 ctaattttaacctaattttttcctccacacttttgcatttaatgttgatctaaagtcaaat 220  Q
    |||||||||||||||||||| ||| ||||||||||||||||||||| ||||||||| ||||    
T  55291137 ctaattttaacctaatttttcccttcacacttttgcatttaatgtttatctaaagtaaaat 55291197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 161 - 220
Target Start/End: Original strand, 19361992 - 19362051
Alignment:
Q  161 taattttaacctaattttttcctccacacttttgcatttaatgttgatctaaagtcaaat 220  Q
    ||||||||||||||||||| |||| |||||||||||||||||||| ||||||||| ||||    
T  19361992 taattttaacctaatttttccctctacacttttgcatttaatgtttatctaaagtaaaat 19362051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 161 - 220
Target Start/End: Original strand, 19368072 - 19368131
Alignment:
Q  161 taattttaacctaattttttcctccacacttttgcatttaatgttgatctaaagtcaaat 220  Q
    ||||||||||||||||||| |||| |||||||||||||||||||| ||||||||| ||||    
T  19368072 taattttaacctaatttttccctctacacttttgcatttaatgtttatctaaagtaaaat 19368131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 166 - 220
Target Start/End: Original strand, 8234915 - 8234969
Alignment:
Q  166 ttaacctaattttttcctccacacttttgcatttaatgttgatctaaagtcaaat 220  Q
    |||||||||||||| ||||||||||||||||||||||||| ||||||||| ||||    
T  8234915 ttaacctaatttttccctccacacttttgcatttaatgtttatctaaagtaaaat 8234969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 166 - 220
Target Start/End: Original strand, 11585887 - 11585941
Alignment:
Q  166 ttaacctaattttttcctccacacttttgcatttaatgttgatctaaagtcaaat 220  Q
    |||||||||||||| ||||||||||||||||||||||||| ||||||||| ||||    
T  11585887 ttaacctaatttttccctccacacttttgcatttaatgtttatctaaagtaaaat 11585941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 143 - 205
Target Start/End: Original strand, 38362618 - 38362680
Alignment:
Q  143 gtctcgctatactaaacctaattttaacctaattttttcctccacacttttgcatttaatgtt 205  Q
    |||||||| |||| |||||||||||||| ||||||||  ||||||||||||||||||||||||    
T  38362618 gtctcgctgtacttaacctaattttaacttaatttttctctccacacttttgcatttaatgtt 38362680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 160 - 205
Target Start/End: Complemental strand, 18684949 - 18684904
Alignment:
Q  160 ctaattttaacctaattttttcctccacacttttgcatttaatgtt 205  Q
    |||||||||||||||||||| |||||||||||||||||||||||||    
T  18684949 ctaattttaacctaatttttccctccacacttttgcatttaatgtt 18684904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 159 - 212
Target Start/End: Complemental strand, 35855560 - 35855507
Alignment:
Q  159 cctaattttaacctaattttttcctccacacttttgcatttaatgttgatctaa 212  Q
    |||||||||||| |||||||||||||||||||||| ||||||||||| ||||||    
T  35855560 cctaattttaacataattttttcctccacacttttacatttaatgtttatctaa 35855507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 161 - 222
Target Start/End: Complemental strand, 46488422 - 46488361
Alignment:
Q  161 taattttaacctaattttttcctccacacttttgcatttaatgttgatctaaagtcaaatta 222  Q
    ||||||||||||||||||||||| |||||||||||||||||| || ||||| ||| ||||||    
T  46488422 taattttaacctaattttttccttcacacttttgcatttaatatttatctatagtaaaatta 46488361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 160 - 220
Target Start/End: Original strand, 4138033 - 4138093
Alignment:
Q  160 ctaattttaacctaattttttcctccacacttttgcatttaatgttgatctaaagtcaaat 220  Q
    |||||||||||||||||||| |||||||||| || ||||||||||| |||||| |||||||    
T  4138033 ctaattttaacctaatttttccctccacactcttacatttaatgtttatctaaggtcaaat 4138093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 160 - 212
Target Start/End: Complemental strand, 8396053 - 8396001
Alignment:
Q  160 ctaattttaacctaattttttcctccacacttttgcatttaatgttgatctaa 212  Q
    |||||||||||||||||||| | ||||||||||||||||||||||| ||||||    
T  8396053 ctaattttaacctaatttttccttccacacttttgcatttaatgtttatctaa 8396001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 160 - 220
Target Start/End: Original strand, 19361367 - 19361427
Alignment:
Q  160 ctaattttaacctaattttttcctccacacttttgcatttaatgttgatctaaagtcaaat 220  Q
    |||||||||||||||||||| |||||||||||||||| |||||||| ||| ||||| ||||    
T  19361367 ctaattttaacctaatttttccctccacacttttgcagttaatgtttatcaaaagtaaaat 19361427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 160 - 212
Target Start/End: Complemental strand, 39093334 - 39093282
Alignment:
Q  160 ctaattttaacctaattttttcctccacacttttgcatttaatgttgatctaa 212  Q
    |||||||||||||||||||| ||||||||||||| ||||||||||| ||||||    
T  39093334 ctaattttaacctaatttttccctccacacttttacatttaatgtttatctaa 39093282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 160 - 220
Target Start/End: Original strand, 51656813 - 51656873
Alignment:
Q  160 ctaattttaacctaattttttcctccacacttttgcatttaatgttgatctaaagtcaaat 220  Q
    |||||||||||||||||||| | ||||||||||||||||||||||| |||| |||| ||||    
T  51656813 ctaattttaacctaatttttccttccacacttttgcatttaatgtttatctgaagtaaaat 51656873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 160 - 212
Target Start/End: Complemental strand, 52842595 - 52842543
Alignment:
Q  160 ctaattttaacctaattttttcctccacacttttgcatttaatgttgatctaa 212  Q
    |||||||||||||||||||| |||||||| |||||||||||||||| ||||||    
T  52842595 ctaattttaacctaatttttccctccacaattttgcatttaatgtttatctaa 52842543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 160 - 212
Target Start/End: Original strand, 55294027 - 55294079
Alignment:
Q  160 ctaattttaacctaattttttcctccacacttttgcatttaatgttgatctaa 212  Q
    |||||||||||||||||||| ||||||||||||| ||||||||||| ||||||    
T  55294027 ctaattttaacctaatttttccctccacacttttacatttaatgtttatctaa 55294079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 166 - 220
Target Start/End: Complemental strand, 39093845 - 39093791
Alignment:
Q  166 ttaacctaattttttcctccacacttttgcatttaatgttgatctaaagtcaaat 220  Q
    |||||||||||||  ||||||||||||||||||||||||| ||||||||| ||||    
T  39093845 ttaacctaattttcccctccacacttttgcatttaatgtttatctaaagtaaaat 39093791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 160 - 220
Target Start/End: Original strand, 5557609 - 5557669
Alignment:
Q  160 ctaattttaacctaattttttcctccacacttttgcatttaatgttgatctaaagtcaaat 220  Q
    ||||||||||||||||||| |||||||||||||| |||| |||||| || |||||| ||||    
T  5557609 ctaattttaacctaattttctcctccacacttttccattcaatgtttatataaagtaaaat 5557669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 160 - 220
Target Start/End: Original strand, 26101412 - 26101472
Alignment:
Q  160 ctaattttaacctaattttttcctccacacttttgcatttaatgttgatctaaagtcaaat 220  Q
    ||||||||||| |||||||| |||  |||||||||||||||||||| ||||||||| ||||    
T  26101412 ctaattttaacttaatttttccctttacacttttgcatttaatgtttatctaaagtaaaat 26101472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 143 - 210
Target Start/End: Complemental strand, 46487563 - 46487498
Alignment:
Q  143 gtctcgctatactaaacctaattttaacctaattttttcctccacacttttgcatttaatgttgatct 210  Q
    ||||||||||||| ||| ||||||||||||||  ||||||  ||||||||||||||||||||| ||||    
T  46487563 gtctcgctatacttaacttaattttaacctaa--ttttccctcacacttttgcatttaatgtttatct 46487498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 8234926 - 8234969
Alignment:
Q  1 tttccctccacacttttgcatttaatatttatctaaagttaaat 44  Q
    |||||||||||||||||||||||||| |||||||||||| ||||    
T  8234926 tttccctccacacttttgcatttaatgtttatctaaagtaaaat 8234969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 9764625 - 9764582
Alignment:
Q  1 tttccctccacacttttgcatttaatatttatctaaagttaaat 44  Q
    |||||||||||||||||||||||||| |||||||||||| ||||    
T  9764625 tttccctccacacttttgcatttaatgtttatctaaagtaaaat 9764582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 11585898 - 11585941
Alignment:
Q  1 tttccctccacacttttgcatttaatatttatctaaagttaaat 44  Q
    |||||||||||||||||||||||||| |||||||||||| ||||    
T  11585898 tttccctccacacttttgcatttaatgtttatctaaagtaaaat 11585941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 161 - 220
Target Start/End: Complemental strand, 46487773 - 46487714
Alignment:
Q  161 taattttaacctaattttttcctccacacttttgcatttaatgttgatctaaagtcaaat 220  Q
    ||||||||||||||||||| ||| |||||||||||||||||| || ||||| ||| ||||    
T  46487773 taattttaacctaatttttcccttcacacttttgcatttaatatttatctatagtaaaat 46487714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 166 - 220
Target Start/End: Complemental strand, 8113520 - 8113466
Alignment:
Q  166 ttaacctaattttttcctccacacttttgcatttaatgttgatctaaagtcaaat 220  Q
    |||||||||||||  ||||||||||||||||||||||||| ||||| ||| ||||    
T  8113520 ttaacctaattttcccctccacacttttgcatttaatgtttatctatagtaaaat 8113466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 29529511 - 29529549
Alignment:
Q  1 tttccctccacacttttgcatttaatatttatctaaagt 39  Q
    |||||||||||||||||||||||||| ||||||||||||    
T  29529511 tttccctccacacttttgcatttaatgtttatctaaagt 29529549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 11586068 - 11586104
Alignment:
Q  1 tttccctccacacttttgcatttaatatttatctaaa 37  Q
    ||||||||||||||||| |||||||||||||||||||    
T  11586068 tttccctccacacttttacatttaatatttatctaaa 11586104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 13495587 - 13495623
Alignment:
Q  1 tttccctccacacttttgcatttaatatttatctaaa 37  Q
    |||||||||||||||||||||||||| ||||||||||    
T  13495587 tttccctccacacttttgcatttaatgtttatctaaa 13495623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 44
Target Start/End: Complemental strand, 39093831 - 39093791
Alignment:
Q  4 ccctccacacttttgcatttaatatttatctaaagttaaat 44  Q
    ||||||||||||||||||||||| |||||||||||| ||||    
T  39093831 ccctccacacttttgcatttaatgtttatctaaagtaaaat 39093791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 160 - 212
Target Start/End: Original strand, 40823917 - 40823968
Alignment:
Q  160 ctaattttaacctaattttttcctccacacttttgcatttaatgttgatctaa 212  Q
    ||||| ||||||||||||| |||||||||||||| ||||||||||| ||||||    
T  40823917 ctaatcttaacctaatttt-tcctccacacttttacatttaatgtttatctaa 40823968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 160 - 212
Target Start/End: Original strand, 48520286 - 48520338
Alignment:
Q  160 ctaattttaacctaattttttcctccacacttttgcatttaatgttgatctaa 212  Q
    |||||||||||||||||||| ||| ||||||||| |||||||| || ||||||    
T  48520286 ctaattttaacctaatttttcccttcacacttttacatttaatatttatctaa 48520338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 165 - 220
Target Start/End: Complemental strand, 9764764 - 9764710
Alignment:
Q  165 tttaacctaattttttcctccacacttttgcatttaatgttgatctaaagtcaaat 220  Q
    |||||||||||||||  ||||||||||||||| |||||||| ||||||||| ||||    
T  9764764 tttaacctaatttttctctccacacttttgca-ttaatgtttatctaaagtaaaat 9764710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 9772860 - 9772817
Alignment:
Q  1 tttccctccacacttttgcatttaatatttatctaaagttaaat 44  Q
    |||||||||| ||||||||||||||| |||||||||||| ||||    
T  9772860 tttccctccaaacttttgcatttaatgtttatctaaagtaaaat 9772817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 19362008 - 19362051
Alignment:
Q  1 tttccctccacacttttgcatttaatatttatctaaagttaaat 44  Q
    |||||||| ||||||||||||||||| |||||||||||| ||||    
T  19362008 tttccctctacacttttgcatttaatgtttatctaaagtaaaat 19362051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 19368088 - 19368131
Alignment:
Q  1 tttccctccacacttttgcatttaatatttatctaaagttaaat 44  Q
    |||||||| ||||||||||||||||| |||||||||||| ||||    
T  19368088 tttccctctacacttttgcatttaatgtttatctaaagtaaaat 19368131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 5 - 44
Target Start/End: Complemental strand, 35856171 - 35856132
Alignment:
Q  5 cctccacacttttgcatttaatatttatctaaagttaaat 44  Q
    |||||||||||||||||||||| |||||||||||| ||||    
T  35856171 cctccacacttttgcatttaatgtttatctaaagtaaaat 35856132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 46487757 - 46487714
Alignment:
Q  1 tttccctccacacttttgcatttaatatttatctaaagttaaat 44  Q
    ||||||| ||||||||||||||||||||||||||| ||| ||||    
T  46487757 tttcccttcacacttttgcatttaatatttatctatagtaaaat 46487714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 55291154 - 55291197
Alignment:
Q  1 tttccctccacacttttgcatttaatatttatctaaagttaaat 44  Q
    ||||||| |||||||||||||||||| |||||||||||| ||||    
T  55291154 tttcccttcacacttttgcatttaatgtttatctaaagtaaaat 55291197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 150 - 220
Target Start/End: Original strand, 3753377 - 3753446
Alignment:
Q  150 tatactaaacctaattttaacctaattttttcctccacacttttgcatttaatgttgatctaaagtcaaat 220  Q
    |||||| ||| ||||||||| |||||||| ||||||| |||| ||||||||||||| || |||||| ||||    
T  3753377 tatacttaacttaattttaatctaatttt-tcctccatacttatgcatttaatgtttatttaaagtaaaat 3753446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 166 - 220
Target Start/End: Original strand, 11583327 - 11583381
Alignment:
Q  166 ttaacctaattttttcctccacacttttgcatttaatgttgatctaaagtcaaat 220  Q
    |||| ||||||||| | | ||||||||||||||||||||| ||||||||| ||||    
T  11583327 ttaatctaatttttccattcacacttttgcatttaatgtttatctaaagtaaaat 11583381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 9 - 46
Target Start/End: Complemental strand, 46488398 - 46488361
Alignment:
Q  9 cacacttttgcatttaatatttatctaaagttaaatta 46  Q
    ||||||||||||||||||||||||||| ||| ||||||    
T  46488398 cacacttttgcatttaatatttatctatagtaaaatta 46488361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 44
Target Start/End: Complemental strand, 8113506 - 8113466
Alignment:
Q  4 ccctccacacttttgcatttaatatttatctaaagttaaat 44  Q
    ||||||||||||||||||||||| |||||||| ||| ||||    
T  8113506 ccctccacacttttgcatttaatgtttatctatagtaaaat 8113466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 160 - 220
Target Start/End: Original strand, 8526809 - 8526868
Alignment:
Q  160 ctaattttaacctaattttttcctccacacttttgcatttaatgttgatctaaagtcaaat 220  Q
    |||| ||||||||||||||  || || ||||||||||||||||||| ||||||||| ||||    
T  8526809 ctaactttaacctaattttcccc-ccgcacttttgcatttaatgtttatctaaagtaaaat 8526868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 165 - 220
Target Start/End: Complemental strand, 11582478 - 11582422
Alignment:
Q  165 tttaacctaattttttcctccacac-ttttgcatttaatgttgatctaaagtcaaat 220  Q
    ||||||||||||||||||  ||||| |||||||||||||||| ||| ||||| ||||    
T  11582478 tttaacctaattttttcccacacactttttgcatttaatgtttatcaaaagtaaaat 11582422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0108 (Bit Score: 50; Significance: 1e-19; HSPs: 2)
Name: scaffold0108
Description:

Target: scaffold0108; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 143 - 220
Target Start/End: Complemental strand, 13896 - 13819
Alignment:
Q  143 gtctcgctatactaaacctaattttaacctaattttttcctccacacttttgcatttaatgttgatctaaagtcaaat 220  Q
    ||||| ||||||| |||||||| |||||||||| ||||||||||||||||||||||||||||| || |||||| ||||    
T  13896 gtctcactatacttaacctaatgttaacctaatattttcctccacacttttgcatttaatgtttatttaaagtaaaat 13819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0108; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 126 - 215
Target Start/End: Complemental strand, 14081 - 13992
Alignment:
Q  126 cttataaagcttaacctgtctcgctatactaaacctaattttaacctaattttttcctccacacttttgcatttaatgttgatctaaagt 215  Q
    ||||||||  ||||||| |||| ||||| | ||| ||||||||| ||||||||| | |||||||||||  |||||||||| |||||||||    
T  14081 cttataaatgttaacctatctcactatatttaacttaattttaatctaatttttccttccacacttttctatttaatgtttatctaaagt 13992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0079 (Bit Score: 49; Significance: 4e-19; HSPs: 3)
Name: scaffold0079
Description:

Target: scaffold0079; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 160 - 220
Target Start/End: Original strand, 9341 - 9401
Alignment:
Q  160 ctaattttaacctaattttttcctccacacttttgcatttaatgttgatctaaagtcaaat 220  Q
    |||||||||||||||||||| ||||||||||||||||||||||||| ||||||||| ||||    
T  9341 ctaattttaacctaatttttccctccacacttttgcatttaatgtttatctaaagtaaaat 9401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0079; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 160 - 212
Target Start/End: Original strand, 9981 - 10033
Alignment:
Q  160 ctaattttaacctaattttttcctccacacttttgcatttaatgttgatctaa 212  Q
    |||||||||||||||||||| |||||||| |||| ||||||||||| ||||||    
T  9981 ctaattttaacctaatttttccctccacatttttccatttaatgtttatctaa 10033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0079; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 9358 - 9401
Alignment:
Q  1 tttccctccacacttttgcatttaatatttatctaaagttaaat 44  Q
    |||||||||||||||||||||||||| |||||||||||| ||||    
T  9358 tttccctccacacttttgcatttaatgtttatctaaagtaaaat 9401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 49; Significance: 4e-19; HSPs: 3)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 160 - 220
Target Start/End: Original strand, 18034 - 18094
Alignment:
Q  160 ctaattttaacctaattttttcctccacacttttgcatttaatgttgatctaaagtcaaat 220  Q
    |||||||||||||||||||| ||||||||||||||||||||||||| ||||||||| ||||    
T  18034 ctaattttaacctaatttttccctccacacttttgcatttaatgtttatctaaagtaaaat 18094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 160 - 212
Target Start/End: Original strand, 18667 - 18719
Alignment:
Q  160 ctaattttaacctaattttttcctccacacttttgcatttaatgttgatctaa 212  Q
    |||||||||||||||||||| |||||| |||||| ||||||||||| ||||||    
T  18667 ctaattttaacctaatttttccctccagacttttacatttaatgtttatctaa 18719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 18051 - 18094
Alignment:
Q  1 tttccctccacacttttgcatttaatatttatctaaagttaaat 44  Q
    |||||||||||||||||||||||||| |||||||||||| ||||    
T  18051 tttccctccacacttttgcatttaatgtttatctaaagtaaaat 18094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0115 (Bit Score: 45; Significance: 1e-16; HSPs: 3)
Name: scaffold0115
Description:

Target: scaffold0115; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 160 - 220
Target Start/End: Complemental strand, 3421 - 3361
Alignment:
Q  160 ctaattttaacctaattttttcctccacacttttgcatttaatgttgatctaaagtcaaat 220  Q
    |||||||||||| ||||||||||||||||||||| ||||||||||| ||||||||| ||||    
T  3421 ctaattttaacccaattttttcctccacacttttacatttaatgtttatctaaagtaaaat 3361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0115; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 160 - 220
Target Start/End: Complemental strand, 4043 - 3978
Alignment:
Q  160 ctaattttaacctaattttttcctccacact-----tttgcatttaatgttgatctaaagtcaaat 220  Q
    |||||||||||||||||||| ||||||||||     ||||||||||||||| ||||||||| ||||    
T  4043 ctaattttaacctaatttttccctccacacttttaatttgcatttaatgtttatctaaagtaaaat 3978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0115; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 160 - 220
Target Start/End: Complemental strand, 11783 - 11718
Alignment:
Q  160 ctaattttaacctaattttttcctccacact-----tttgcatttaatgttgatctaaagtcaaat 220  Q
    |||||||||||||||||||| ||||||||||     ||||||||||||||| ||||||||| ||||    
T  11783 ctaattttaacctaatttttccctccacacttttaatttgcatttaatgtttatctaaagtaaaat 11718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 160 - 220
Target Start/End: Complemental strand, 54968 - 54908
Alignment:
Q  160 ctaattttaacctaattttttcctccacacttttgcatttaatgttgatctaaagtcaaat 220  Q
    |||||||||||||||||||| ||||||||||||| ||||||||||| |||||| |||||||    
T  54968 ctaattttaacctaatttttccctccacacttttacatttaatgtttatctaaggtcaaat 54908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 45; Significance: 1e-16; HSPs: 3)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 160 - 220
Target Start/End: Complemental strand, 232606 - 232546
Alignment:
Q  160 ctaattttaacctaattttttcctccacacttttgcatttaatgttgatctaaagtcaaat 220  Q
    |||||||||||||||||||| ||||||||| ||||||||||||||| ||||||||| ||||    
T  232606 ctaattttaacctaatttttccctccacacatttgcatttaatgtttatctaaagtaaaat 232546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 160 - 212
Target Start/End: Complemental strand, 231973 - 231921
Alignment:
Q  160 ctaattttaacctaattttttcctccacacttttgcatttaatgttgatctaa 212  Q
    |||||||||||||||||||| |||| | |||||| ||||||||||| ||||||    
T  231973 ctaattttaacctaatttttacctcaaaacttttacatttaatgtttatctaa 231921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #3
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 232589 - 232546
Alignment:
Q  1 tttccctccacacttttgcatttaatatttatctaaagttaaat 44  Q
    ||||||||||||| |||||||||||| |||||||||||| ||||    
T  232589 tttccctccacacatttgcatttaatgtttatctaaagtaaaat 232546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2127 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 2)
Name: scaffold2127
Description:

Target: scaffold2127; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 160 - 220
Target Start/End: Complemental strand, 998 - 938
Alignment:
Q  160 ctaattttaacctaattttttcctccacacttttgcatttaatgttgatctaaagtcaaat 220  Q
    |||||||||| || |||||| ||||||||||||||||||||||||| ||||||||| ||||    
T  998 ctaattttaaactgatttttccctccacacttttgcatttaatgtttatctaaagtaaaat 938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2127; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 981 - 938
Alignment:
Q  1 tttccctccacacttttgcatttaatatttatctaaagttaaat 44  Q
    |||||||||||||||||||||||||| |||||||||||| ||||    
T  981 tttccctccacacttttgcatttaatgtttatctaaagtaaaat 938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0374 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0374
Description:

Target: scaffold0374; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 126 - 213
Target Start/End: Complemental strand, 2425 - 2337
Alignment:
Q  126 cttataaagcttaacctgtctcgctatactaaacctaattttaacctaattttttcctcca-cacttttgcatttaatgttgatctaaa 213  Q
    ||||||||  ||||||  ||||||  |||||||||||||||||||||||||||| |||||| ||||||| ||||| ||||| |||||||    
T  2425 cttataaatgttaacccatctcgcactactaaacctaattttaacctaatttttccctccaccactttttcatttgatgtttatctaaa 2337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 4)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 160 - 212
Target Start/End: Original strand, 4215 - 4267
Alignment:
Q  160 ctaattttaacctaattttttcctccacacttttgcatttaatgttgatctaa 212  Q
    |||||||||||||||||||| ||||||||||||| ||||||||||| ||||||    
T  4215 ctaattttaacctaatttttccctccacacttttacatttaatgtttatctaa 4267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 160 - 212
Target Start/End: Original strand, 10664 - 10716
Alignment:
Q  160 ctaattttaacctaattttttcctccacacttttgcatttaatgttgatctaa 212  Q
    |||||||||||| ||||||| ||||||||||||| ||||||||||| ||||||    
T  10664 ctaattttaaccaaatttttccctccacacttttacatttaatgtttatctaa 10716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 3599 - 3642
Alignment:
Q  1 tttccctccacacttttgcatttaatatttatctaaagttaaat 44  Q
    |||||||||||||||||||||||||| |||||||||||| ||||    
T  3599 tttccctccacacttttgcatttaatgtttatctaaagtaaaat 3642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 176 - 220
Target Start/End: Original strand, 3598 - 3642
Alignment:
Q  176 tttttcctccacacttttgcatttaatgttgatctaaagtcaaat 220  Q
    |||| ||||||||||||||||||||||||| ||||||||| ||||    
T  3598 ttttccctccacacttttgcatttaatgtttatctaaagtaaaat 3642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0381 (Bit Score: 37; Significance: 0.000000000006; HSPs: 2)
Name: scaffold0381
Description:

Target: scaffold0381; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 160 - 212
Target Start/End: Complemental strand, 9885 - 9833
Alignment:
Q  160 ctaattttaacctaattttttcctccacacttttgcatttaatgttgatctaa 212  Q
    |||||||||||||||||||| |||||| |||||| ||||||||||| ||||||    
T  9885 ctaattttaacctaatttttccctccagacttttacatttaatgtttatctaa 9833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0381; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 160 - 220
Target Start/End: Complemental strand, 10518 - 10458
Alignment:
Q  160 ctaattttaacctaattttttcctccacacttttgcatttaatgttgatctaaagtcaaat 220  Q
    |||||||||||||||||||| | |||| ||||||| |||||||||| ||||||||| ||||    
T  10518 ctaattttaacctaatttttccatccatacttttgtatttaatgtttatctaaagtaaaat 10458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0230 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0230
Description:

Target: scaffold0230; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 160 - 200
Target Start/End: Original strand, 27303 - 27343
Alignment:
Q  160 ctaattttaacctaattttttcctccacacttttgcattta 200  Q
    |||||||||||||||||||| ||||||||||||||||||||    
T  27303 ctaattttaacctaatttttccctccacacttttgcattta 27343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0069 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 160 - 212
Target Start/End: Complemental strand, 13733 - 13681
Alignment:
Q  160 ctaattttaacctaattttttcctccacacttttgcatttaatgttgatctaa 212  Q
    |||||||||||||||||||| |||||| |||||| ||||||||||| ||||||    
T  13733 ctaattttaacctaatttttccctccagacttttacatttaatgtttatctaa 13681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0484 (Bit Score: 34; Significance: 0.0000000004; HSPs: 2)
Name: scaffold0484
Description:

Target: scaffold0484; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 171 - 220
Target Start/End: Original strand, 8808 - 8857
Alignment:
Q  171 ctaattttttcctccacacttttgcatttaatgttgatctaaagtcaaat 220  Q
    ||||||||| ||||||||| ||||||||||||||| ||||||||| ||||    
T  8808 ctaatttttccctccacacctttgcatttaatgtttatctaaagtaaaat 8857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0484; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 8814 - 8857
Alignment:
Q  1 tttccctccacacttttgcatttaatatttatctaaagttaaat 44  Q
    ||||||||||||| |||||||||||| |||||||||||| ||||    
T  8814 tttccctccacacctttgcatttaatgtttatctaaagtaaaat 8857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University