View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4292_low_5 (Length: 526)
Name: NF4292_low_5
Description: NF4292
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4292_low_5 |
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Alignment Details
Target: chr7 (Bit Score: 476; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 476; E-Value: 0
Query Start/End: Original strand, 10 - 518
Target Start/End: Original strand, 37859116 - 37859624
Alignment:
| Q |
10 |
catcatcaccatcataatcaaaaacagtctcaaaaatactcaacctaagcctaccatcaacacgttctgcatggaaataaggagtagtagaaggagaagc |
109 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37859116 |
catcatcaccatcataatcaaaaacagtctcaaaaatactcaacctaagcctaccatcaacacgttctgcatggaaataaggagtagtagaaggagaagc |
37859215 |
T |
|
| Q |
110 |
aatagcttctaatatcaacctaccaccttcgcgatgaggcctaacatgaacaccaccaaaatcagttattgatgtgagtggtggaggaaagttacaagaa |
209 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |
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| T |
37859216 |
aatagcttctaatatcaacctaccaccttcgcgatgaggcctaacatgaacaccaccaaaatcagttattgaagtgagtggtggaggaaagttacaagaa |
37859315 |
T |
|
| Q |
210 |
gctttattaactcttctagacacacaattattcatgttgttattgttaacatcatttcttgtgtcagaagaaaataatgaaacatcaatatcactacttt |
309 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37859316 |
gctttattaactcttctagacacacaattattcatgttgttattgttaacatcatttcttgtgtcagaagaaaataatgaaacatcaatatcactacttt |
37859415 |
T |
|
| Q |
310 |
caccagcattgctaccagtttcactcccaaggctttcagtgcacatttctaagctcttttcacttagcattgatgaggaacgtttcacagtaggatgaac |
409 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37859416 |
caccagcattgctaccagtttcactcccaaggctttcagtgcacatttctaagctcttttcacttagcattgatgaggaacgtttcacagtaggatgaac |
37859515 |
T |
|
| Q |
410 |
atagactttaccatttgcattttcagttttgttagtttctgttaaagcttgaaggaaactccagctagattttgtgtcannnnnnncacattcattgttg |
509 |
Q |
| |
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|||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |
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| T |
37859516 |
atagacgttaccatttgcattttcaattttgttagtttctgttaaagcttgaaggaaactccagctagattttgtgtcatttttttcacattcattgttg |
37859615 |
T |
|
| Q |
510 |
atgatgatg |
518 |
Q |
| |
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||||||||| |
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| T |
37859616 |
atgatgatg |
37859624 |
T |
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