View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4293_low_3 (Length: 625)
Name: NF4293_low_3
Description: NF4293
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4293_low_3 |
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Alignment Details
Target: chr2 (Bit Score: 524; Significance: 0; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 524; E-Value: 0
Query Start/End: Original strand, 64 - 603
Target Start/End: Original strand, 8187863 - 8188402
Alignment:
| Q |
64 |
tgcagactttaatcctttgtttctaaaggaaacactttcggatgcttcatcaagtttgagttctgaaggtgatggattggatcgtaatgttgtagatagt |
163 |
Q |
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| T |
8187863 |
tgcagactttaatcctttgtttctaaaggaaacactttcagatgcttcatcaagtttgagttctgaaggtgatggattggatcgtaatgttgtagatagt |
8187962 |
T |
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| Q |
164 |
gggccatctatggatatagatttggaaaagataacggataatgagcaaatctgtagtgcagtagattctgaacatggcgaggaggaaattgttttagaag |
263 |
Q |
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| T |
8187963 |
gggccatctatggatatagatttggaaaagataacggataatgagcaaatctgtagtgcagtagattctgaacatggcgaggaggaaattgttttagaag |
8188062 |
T |
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| Q |
264 |
cggcaggtatgatatctcaattggagattgataaggagaagaagaatgacttgattagtggtactagtgatggttttaggatagaagacataagcaacac |
363 |
Q |
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| T |
8188063 |
cggcaggtatgatatctcaattggagattgataaggagaagaagaatgacttgattagtggtactagtgatggttttaggatagaagacataagcaacac |
8188162 |
T |
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| Q |
364 |
acagaaaccccgaagcccagtgatagacatagatactgaggatgctatttgtatgcgtactagagctcgttattcgcttgaaggtttcagtcttgatgag |
463 |
Q |
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| T |
8188163 |
aacgaaaccccgaagcccagtgatagacatagatactgaggatgctatttgtatgcgtactagagctcgttattcgcttgaaggtttcagtcttgatgag |
8188262 |
T |
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| Q |
464 |
cttgagacctttcttcaagagaccgatgatgaagatgatgttcaaaatgtcgatgatgaagaagagtataaaaaatttctagcagctgtattacagggtg |
563 |
Q |
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| T |
8188263 |
cttgagacctttcttcaagagactgatgatgaagatgatgttcaaaatgtcgatgatgaagaagagtataaaaaatttctagcagctgtattacagggtg |
8188362 |
T |
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| Q |
564 |
gagaacgtgacggtctttcatctcatgaaaatgaaaacct |
603 |
Q |
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| T |
8188363 |
gagaacgtgacggtctttcatctcatgaaaatgaaaacct |
8188402 |
T |
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