View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4294_low_17 (Length: 299)
Name: NF4294_low_17
Description: NF4294
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4294_low_17 |
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Alignment Details
Target: chr8 (Bit Score: 273; Significance: 1e-152; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 273; E-Value: 1e-152
Query Start/End: Original strand, 18 - 294
Target Start/End: Original strand, 34860448 - 34860724
Alignment:
| Q |
18 |
actctcttggctgcagaggtactcaatcaaagggacaattaatttccaaaccaacatcacattaacacctaataatggtgacaaatgaacgaatatacca |
117 |
Q |
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| T |
34860448 |
actctcttggctgcagaggtactcaatcaaagggacaattaatttccaaaccaacatcacattaacacctaataatggtgacaaatgaacgaatatacca |
34860547 |
T |
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| Q |
118 |
cattaattacctgagaaaaatcaggacccagataacttgagctcaaggcttccacaatctacaataaacctagtcaacatcaattaaaaggaaaggatat |
217 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34860548 |
cattaattacctgagaaaaatcaggacccagataacttgagctcaaggcttccacaatctacaataaacctagtcaacatcaattaaaaggaaaggatat |
34860647 |
T |
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| Q |
218 |
actgataaacaaagagcacgaccacacttacaggagtcaatctatgtttctcctgttctctgattgatgatgtccat |
294 |
Q |
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| T |
34860648 |
actgataaacaaagagcacgaccacacttacaggagtcaatctatgtttctcctgttctctgattgaagatgtccat |
34860724 |
T |
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