View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4295_low_22 (Length: 237)
Name: NF4295_low_22
Description: NF4295
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4295_low_22 |
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| [»] chr3 (1 HSPs) |
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Alignment Details
Target: chr3 (Bit Score: 180; Significance: 2e-97; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 180; E-Value: 2e-97
Query Start/End: Original strand, 22 - 237
Target Start/End: Complemental strand, 37809947 - 37809732
Alignment:
| Q |
22 |
tgtcattgtcaaaatgtgtttagtttgtgtcaacacttcagagatttagttatgggacccgaaaggtgttgagagtttcaaattagataactgcatggcc |
121 |
Q |
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| T |
37809947 |
tgtcattgtcaaaatatgtttggtttgtgtcaacactttagagatttagttatgggacccgaaaggtgttgagagtttcacattagataactgcgtggcc |
37809848 |
T |
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| Q |
122 |
tgaacatttgttaaaaattagacacaactcaaattttaagaggaatgaaacaagattgaaaaggaacaaaatactttaaagtaattaatccactgcctag |
221 |
Q |
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| T |
37809847 |
ttaacattcgttaaaaattagacacaactcaaattttaagaggaatgaaacaagattgaaaaggaacaaaatattttaaagtcattaatccactgcctag |
37809748 |
T |
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| Q |
222 |
tcattctatgtcaagt |
237 |
Q |
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|||||||||||||||| |
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| T |
37809747 |
tcattctatgtcaagt |
37809732 |
T |
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