View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4295_low_23 (Length: 232)

Name: NF4295_low_23
Description: NF4295
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4295_low_23
NF4295_low_23
[»] chr1 (55 HSPs)
chr1 (7-232)||(23920826-23921051)
chr1 (15-92)||(11422542-11422619)
chr1 (15-93)||(24636028-24636106)
chr1 (15-92)||(23817412-23817489)
chr1 (20-92)||(48762218-48762290)
chr1 (22-93)||(180832-180903)
chr1 (15-86)||(49936830-49936901)
chr1 (15-93)||(43452644-43452722)
chr1 (15-92)||(16976057-16976134)
chr1 (21-92)||(19897647-19897718)
chr1 (21-92)||(21641589-21641660)
chr1 (15-90)||(23174399-23174474)
chr1 (15-92)||(4097105-4097181)
chr1 (15-92)||(20434609-20434686)
chr1 (23-94)||(6314226-6314297)
chr1 (15-85)||(18618937-18619006)
chr1 (15-93)||(25888915-25888992)
chr1 (15-66)||(50351905-50351956)
chr1 (45-92)||(18057811-18057858)
chr1 (41-92)||(31084400-31084451)
chr1 (41-92)||(45890591-45890642)
chr1 (43-88)||(1395351-1395396)
chr1 (43-88)||(10974632-10974677)
chr1 (43-88)||(14229171-14229216)
chr1 (43-88)||(17893273-17893318)
chr1 (45-94)||(21255833-21255882)
chr1 (45-94)||(33156985-33157034)
chr1 (45-93)||(42134135-42134183)
chr1 (45-88)||(9628601-9628644)
chr1 (46-85)||(18056791-18056830)
chr1 (43-94)||(31763768-31763819)
chr1 (47-93)||(9041055-9041101)
chr1 (42-88)||(12070609-12070655)
chr1 (45-95)||(18952399-18952449)
chr1 (45-91)||(23319011-23319057)
chr1 (21-63)||(34370495-34370537)
chr1 (21-66)||(8401423-8401468)
chr1 (43-88)||(17811283-17811328)
chr1 (45-86)||(17893073-17893114)
chr1 (45-93)||(18928957-18929005)
chr1 (44-88)||(29945417-29945461)
chr1 (45-93)||(32595098-32595146)
chr1 (45-88)||(12796422-12796465)
chr1 (45-88)||(14229363-14229406)
chr1 (46-85)||(22348046-22348085)
chr1 (45-88)||(31763975-31764018)
chr1 (45-88)||(32143771-32143814)
chr1 (45-88)||(42133943-42133986)
chr1 (45-84)||(45849111-45849150)
chr1 (43-88)||(11354511-11354556)
chr1 (45-82)||(18928783-18928820)
chr1 (45-86)||(32595285-32595326)
chr1 (56-93)||(49992512-49992549)
chr1 (44-88)||(14390045-14390089)
chr1 (46-78)||(16115865-16115897)
[»] chr4 (78 HSPs)
chr4 (1-86)||(50644628-50644713)
chr4 (15-92)||(10473620-10473697)
chr4 (15-92)||(45256867-45256944)
chr4 (15-91)||(26577257-26577333)
chr4 (15-92)||(49425944-49426021)
chr4 (15-92)||(53441422-53441499)
chr4 (20-92)||(11786081-11786153)
chr4 (20-92)||(11798248-11798320)
chr4 (15-86)||(13635618-13635689)
chr4 (20-86)||(30597806-30597872)
chr4 (15-84)||(638966-639035)
chr4 (15-92)||(15051023-15051100)
chr4 (22-85)||(49492406-49492469)
chr4 (15-93)||(27865623-27865701)
chr4 (15-78)||(51921166-51921229)
chr4 (20-90)||(51836324-51836394)
chr4 (15-76)||(35291451-35291512)
chr4 (20-92)||(46672545-46672617)
chr4 (45-92)||(22180201-22180248)
chr4 (43-103)||(55660442-55660503)
chr4 (45-92)||(30358839-30358886)
chr4 (43-88)||(2124343-2124388)
chr4 (43-88)||(6841820-6841865)
chr4 (43-88)||(31763108-31763153)
chr4 (45-88)||(1492671-1492714)
chr4 (45-88)||(8165761-8165804)
chr4 (45-88)||(17109920-17109963)
chr4 (45-92)||(21098134-21098181)
chr4 (45-88)||(21995669-21995712)
chr4 (46-85)||(22181264-22181303)
chr4 (46-85)||(27764247-27764286)
chr4 (45-88)||(30779342-30779385)
chr4 (45-88)||(33819690-33819733)
chr4 (46-85)||(36621720-36621759)
chr4 (45-88)||(36924240-36924283)
chr4 (45-88)||(37059710-37059753)
chr4 (46-85)||(45255982-45256021)
chr4 (46-85)||(50643750-50643789)
chr4 (45-88)||(53865245-53865288)
chr4 (43-88)||(562774-562819)
chr4 (20-57)||(1621983-1622020)
chr4 (43-88)||(9813145-9813190)
chr4 (45-94)||(12722940-12722989)
chr4 (45-86)||(25715644-25715685)
chr4 (45-94)||(25715729-25715778)
chr4 (43-88)||(31762928-31762973)
chr4 (43-88)||(33883293-33883338)
chr4 (20-65)||(36011950-36011995)
chr4 (43-88)||(41025060-41025105)
chr4 (43-88)||(43375521-43375566)
chr4 (45-86)||(54895585-54895626)
chr4 (47-96)||(55782641-55782690)
chr4 (47-96)||(55846821-55846870)
chr4 (45-85)||(8157291-8157331)
chr4 (41-93)||(18924285-18924332)
chr4 (46-82)||(26447431-26447467)
chr4 (43-87)||(38010710-38010754)
chr4 (19-67)||(55765587-55765635)
chr4 (45-88)||(2124547-2124590)
chr4 (45-88)||(17109718-17109761)
chr4 (45-84)||(36309419-36309458)
chr4 (45-88)||(36309619-36309662)
chr4 (45-88)||(43374446-43374489)
chr4 (45-88)||(48076911-48076954)
chr4 (45-88)||(54895403-54895446)
chr4 (47-85)||(29826626-29826664)
chr4 (45-83)||(51076901-51076939)
chr4 (42-88)||(53526451-53526497)
chr4 (43-88)||(1492861-1492906)
chr4 (45-94)||(1728618-1728667)
chr4 (55-88)||(12722736-12722769)
chr4 (43-88)||(38563961-38564006)
chr4 (47-92)||(50070714-50070759)
chr4 (47-91)||(14499247-14499291)
chr4 (48-88)||(33871283-33871323)
chr4 (45-85)||(33883485-33883525)
chr4 (46-78)||(48077864-48077896)
chr4 (45-93)||(50562664-50562712)
[»] chr8 (49 HSPs)
chr8 (15-92)||(4835513-4835590)
chr8 (21-92)||(1149910-1149981)
chr8 (20-94)||(39657701-39657775)
chr8 (15-92)||(34633208-34633285)
chr8 (13-92)||(2751205-2751284)
chr8 (15-84)||(1209758-1209827)
chr8 (23-94)||(30414024-30414095)
chr8 (22-92)||(7059144-7059214)
chr8 (15-92)||(10237456-10237533)
chr8 (23-92)||(15227140-15227209)
chr8 (15-92)||(19784373-19784450)
chr8 (21-92)||(41451213-41451284)
chr8 (15-92)||(41099284-41099364)
chr8 (15-76)||(4840974-4841035)
chr8 (39-93)||(15259849-15259903)
chr8 (45-93)||(35301623-35301671)
chr8 (45-88)||(18757330-18757373)
chr8 (46-85)||(1208716-1208755)
chr8 (186-232)||(1838430-1838474)
chr8 (46-85)||(4836720-4836759)
chr8 (46-85)||(4842165-4842204)
chr8 (45-92)||(9853258-9853305)
chr8 (45-88)||(17792894-17792937)
chr8 (46-85)||(32987464-32987503)
chr8 (45-96)||(34647162-34647213)
chr8 (45-88)||(35448612-35448655)
chr8 (46-85)||(39021982-39022021)
chr8 (47-85)||(42433708-42433746)
chr8 (43-88)||(10586061-10586106)
chr8 (43-88)||(15809840-15809885)
chr8 (45-86)||(23397445-23397486)
chr8 (41-86)||(40022389-40022434)
chr8 (45-85)||(1672933-1672973)
chr8 (45-93)||(15808879-15808927)
chr8 (43-87)||(24473244-24473288)
chr8 (45-85)||(27506708-27506748)
chr8 (43-86)||(185882-185925)
chr8 (46-85)||(7058121-7058160)
chr8 (15-54)||(7857782-7857821)
chr8 (45-88)||(17656617-17656660)
chr8 (45-84)||(21120195-21120234)
chr8 (45-88)||(23567485-23567528)
chr8 (45-92)||(39023001-39023048)
chr8 (47-94)||(42434566-42434613)
chr8 (45-87)||(23567645-23567687)
chr8 (15-57)||(43690742-43690784)
chr8 (43-88)||(5222919-5222964)
chr8 (43-88)||(34343248-34343293)
chr8 (43-88)||(34343451-34343496)
[»] chr7 (46 HSPs)
chr7 (15-92)||(41910999-41911076)
chr7 (15-94)||(47340249-47340328)
chr7 (15-92)||(32685839-32685916)
chr7 (15-92)||(46358622-46358699)
chr7 (15-92)||(46572569-46572646)
chr7 (21-92)||(48692028-48692099)
chr7 (15-93)||(31660171-31660249)
chr7 (15-92)||(763799-763876)
chr7 (15-92)||(30884109-30884186)
chr7 (23-92)||(35737058-35737127)
chr7 (20-91)||(15973856-15973927)
chr7 (20-86)||(16933136-16933202)
chr7 (20-86)||(16938519-16938585)
chr7 (45-92)||(11732037-11732084)
chr7 (41-92)||(48830597-48830648)
chr7 (38-93)||(34228599-34228654)
chr7 (46-85)||(48690902-48690941)
chr7 (43-88)||(46004535-46004580)
chr7 (43-94)||(7843719-7843770)
chr7 (46-85)||(15974955-15974994)
chr7 (45-88)||(26945716-26945759)
chr7 (46-85)||(30428880-30428919)
chr7 (45-88)||(38837731-38837774)
chr7 (45-88)||(44426597-44426640)
chr7 (15-92)||(48306325-48306398)
chr7 (44-94)||(7845098-7845148)
chr7 (45-91)||(46025062-46025108)
chr7 (45-94)||(24360757-24360806)
chr7 (43-88)||(34227876-34227921)
chr7 (45-93)||(31365265-31365313)
chr7 (44-88)||(41065970-41066014)
chr7 (45-93)||(43742243-43742291)
chr7 (45-93)||(44426801-44426849)
chr7 (45-88)||(6620618-6620661)
chr7 (46-85)||(12279752-12279791)
chr7 (53-92)||(33798743-33798782)
chr7 (45-88)||(34227675-34227718)
chr7 (45-95)||(45478516-45478566)
chr7 (43-88)||(924496-924541)
chr7 (47-92)||(12286723-12286768)
chr7 (43-84)||(38837543-38837584)
chr7 (45-93)||(5728619-5728667)
chr7 (48-88)||(26945513-26945553)
chr7 (46-78)||(28396736-28396768)
chr7 (45-85)||(46004343-46004383)
chr7 (15-43)||(46345908-46345936)
[»] chr2 (46 HSPs)
chr2 (15-92)||(1292066-1292143)
chr2 (21-94)||(7487139-7487212)
chr2 (15-92)||(18297163-18297240)
chr2 (15-92)||(39355137-39355214)
chr2 (15-92)||(8149933-8150010)
chr2 (15-92)||(8154557-8154634)
chr2 (15-92)||(15016453-15016530)
chr2 (15-92)||(25193963-25194040)
chr2 (20-86)||(34464818-34464884)
chr2 (41-93)||(41345081-41345133)
chr2 (43-88)||(24183597-24183642)
chr2 (15-62)||(2264626-2264673)
chr2 (15-54)||(9143687-9143726)
chr2 (46-85)||(18298130-18298169)
chr2 (43-94)||(19246655-19246706)
chr2 (45-88)||(20661395-20661438)
chr2 (46-85)||(25192899-25192938)
chr2 (45-88)||(30777294-30777337)
chr2 (45-88)||(31783792-31783835)
chr2 (43-94)||(37867355-37867406)
chr2 (22-64)||(18762946-18762988)
chr2 (15-56)||(4578590-4578631)
chr2 (43-88)||(12449053-12449098)
chr2 (43-88)||(15253020-15253065)
chr2 (43-88)||(25575322-25575367)
chr2 (45-86)||(34726605-34726646)
chr2 (45-78)||(36635764-36635797)
chr2 (43-88)||(37867153-37867198)
chr2 (43-88)||(42364491-42364536)
chr2 (45-94)||(44915493-44915542)
chr2 (44-88)||(12449244-12449288)
chr2 (45-88)||(16111707-16111750)
chr2 (46-85)||(20709781-20709820)
chr2 (45-88)||(22596303-22596346)
chr2 (45-88)||(22596506-22596549)
chr2 (45-88)||(31711509-31711552)
chr2 (45-88)||(34726798-34726841)
chr2 (45-88)||(42364695-42364738)
chr2 (45-88)||(43823877-43823920)
chr2 (45-87)||(20661597-20661639)
chr2 (43-88)||(15150291-15150336)
chr2 (43-88)||(22588317-22588362)
chr2 (39-88)||(25996085-25996134)
chr2 (55-88)||(31783997-31784030)
chr2 (43-87)||(31711699-31711742)
chr2 (44-88)||(44915290-44915334)
[»] chr6 (30 HSPs)
chr6 (15-93)||(15493276-15493354)
chr6 (15-92)||(6900905-6900982)
chr6 (15-92)||(7089184-7089261)
chr6 (20-92)||(878367-878439)
chr6 (21-92)||(34869950-34870021)
chr6 (15-93)||(1449644-1449722)
chr6 (20-86)||(31216769-31216835)
chr6 (41-92)||(7765402-7765453)
chr6 (43-88)||(10588953-10588998)
chr6 (43-88)||(22857487-22857532)
chr6 (45-85)||(15034993-15035033)
chr6 (43-95)||(19281275-19281327)
chr6 (15-67)||(35121491-35121542)
chr6 (46-85)||(12394399-12394438)
chr6 (45-88)||(19284370-19284413)
chr6 (45-88)||(21384991-21385034)
chr6 (28-67)||(33345356-33345395)
chr6 (46-85)||(33346390-33346429)
chr6 (15-61)||(1536814-1536860)
chr6 (47-93)||(18755657-18755703)
chr6 (43-88)||(25119105-25119150)
chr6 (45-86)||(30909441-30909482)
chr6 (45-88)||(10698576-10698619)
chr6 (43-86)||(20522848-20522891)
chr6 (45-88)||(22857679-22857722)
chr6 (45-88)||(25119472-25119515)
chr6 (45-86)||(14237779-14237820)
chr6 (39-88)||(18612358-18612407)
chr6 (44-88)||(29163718-29163762)
chr6 (53-85)||(34399648-34399680)
[»] chr5 (47 HSPs)
chr5 (15-93)||(14394570-14394648)
chr5 (15-92)||(14940243-14940320)
chr5 (20-92)||(26637724-26637796)
chr5 (22-93)||(28069241-28069312)
chr5 (15-92)||(37456782-37456859)
chr5 (21-93)||(3883921-3883993)
chr5 (15-92)||(30783560-30783636)
chr5 (22-92)||(15416773-15416843)
chr5 (15-92)||(13553085-13553162)
chr5 (23-92)||(34330166-34330230)
chr5 (45-91)||(13363796-13363842)
chr5 (43-88)||(15559048-15559093)
chr5 (44-88)||(3340589-3340633)
chr5 (46-85)||(13362777-13362816)
chr5 (45-88)||(22695542-22695585)
chr5 (43-86)||(23155526-23155569)
chr5 (46-85)||(25017236-25017275)
chr5 (46-85)||(28070172-28070211)
chr5 (45-88)||(39861782-39861825)
chr5 (45-87)||(11660984-11661026)
chr5 (43-88)||(11660792-11660837)
chr5 (43-88)||(16552246-16552291)
chr5 (43-88)||(39086516-39086561)
chr5 (45-85)||(23155845-23155885)
chr5 (45-93)||(35662061-35662109)
chr5 (44-88)||(39166341-39166385)
chr5 (201-232)||(6689911-6689942)
chr5 (45-88)||(20134198-20134241)
chr5 (45-88)||(20134401-20134444)
chr5 (45-88)||(20696329-20696372)
chr5 (46-85)||(23335726-23335765)
chr5 (43-86)||(25671288-25671331)
chr5 (46-85)||(34329134-34329173)
chr5 (45-88)||(35662235-35662278)
chr5 (43-93)||(7286747-7286797)
chr5 (45-87)||(22671999-22672041)
chr5 (50-92)||(23948588-23948630)
chr5 (45-87)||(39861579-39861621)
chr5 (44-85)||(703732-703773)
chr5 (43-88)||(5411756-5411801)
chr5 (45-78)||(16667667-16667700)
chr5 (45-86)||(23334712-23334752)
chr5 (47-92)||(25189817-25189862)
chr5 (55-88)||(25545584-25545617)
chr5 (43-88)||(36864268-36864313)
chr5 (45-88)||(15059635-15059679)
chr5 (45-85)||(22830790-22830830)
[»] chr3 (52 HSPs)
chr3 (15-93)||(9595866-9595944)
chr3 (15-93)||(19384375-19384453)
chr3 (19-92)||(6097571-6097644)
chr3 (21-94)||(54379270-54379343)
chr3 (20-92)||(30947798-30947870)
chr3 (23-93)||(19284781-19284851)
chr3 (15-85)||(50755164-50755234)
chr3 (23-92)||(3475294-3475363)
chr3 (15-92)||(9106369-9106446)
chr3 (15-92)||(10986454-10986531)
chr3 (15-92)||(26662425-26662502)
chr3 (20-92)||(51361518-51361590)
chr3 (15-92)||(33413899-33413977)
chr3 (15-84)||(2941821-2941890)
chr3 (15-92)||(26960728-26960805)
chr3 (15-92)||(46237645-46237722)
chr3 (45-92)||(16276664-16276711)
chr3 (39-92)||(8719133-8719186)
chr3 (39-92)||(9071020-9071073)
chr3 (15-92)||(47335134-47335216)
chr3 (15-64)||(31853158-31853207)
chr3 (45-93)||(34562393-34562441)
chr3 (45-99)||(36185907-36185961)
chr3 (45-88)||(8036799-8036842)
chr3 (46-85)||(19385334-19385373)
chr3 (45-88)||(38345279-38345322)
chr3 (45-88)||(47225759-47225802)
chr3 (45-88)||(50416479-50416522)
chr3 (45-88)||(50416566-50416609)
chr3 (46-85)||(51362457-51362496)
chr3 (43-85)||(27446213-27446255)
chr3 (45-93)||(8036991-8037039)
chr3 (45-85)||(8718108-8718148)
chr3 (45-85)||(9069995-9070035)
chr3 (45-85)||(47924368-47924408)
chr3 (45-88)||(12974011-12974054)
chr3 (45-88)||(12974193-12974235)
chr3 (46-85)||(16277433-16277472)
chr3 (45-88)||(19012564-19012607)
chr3 (45-88)||(36185725-36185768)
chr3 (45-92)||(41191404-41191451)
chr3 (46-85)||(50754013-50754052)
chr3 (15-57)||(7044387-7044429)
chr3 (52-86)||(17620737-17620771)
chr3 (55-93)||(27068526-27068564)
chr3 (43-93)||(47729256-47729306)
chr3 (47-92)||(8054963-8055008)
chr3 (46-79)||(52987669-52987702)
chr3 (55-83)||(1377802-1377830)
chr3 (45-93)||(16653491-16653538)
chr3 (45-93)||(19012386-19012433)
chr3 (45-85)||(47225850-47225890)
[»] scaffold0074 (1 HSPs)
scaffold0074 (15-92)||(24376-24453)
[»] scaffold0571 (1 HSPs)
scaffold0571 (15-92)||(540-617)
[»] scaffold0045 (1 HSPs)
scaffold0045 (15-86)||(33786-33857)
[»] scaffold0338 (1 HSPs)
scaffold0338 (15-85)||(6485-6555)
[»] scaffold0581 (1 HSPs)
scaffold0581 (15-67)||(8333-8385)
[»] scaffold0102 (1 HSPs)
scaffold0102 (45-96)||(33607-33658)
[»] scaffold0129 (1 HSPs)
scaffold0129 (43-88)||(20120-20165)
[»] scaffold0516 (1 HSPs)
scaffold0516 (45-88)||(1250-1293)
[»] scaffold0249 (2 HSPs)
scaffold0249 (45-88)||(23543-23586)
scaffold0249 (45-84)||(23737-23776)
[»] scaffold0238 (1 HSPs)
scaffold0238 (46-85)||(25251-25290)
[»] scaffold0194 (1 HSPs)
scaffold0194 (45-92)||(28677-28724)
[»] scaffold0009 (2 HSPs)
scaffold0009 (45-90)||(202909-202954)
scaffold0009 (45-84)||(51908-51947)
[»] scaffold0019 (1 HSPs)
scaffold0019 (44-88)||(72703-72747)
[»] scaffold0544 (1 HSPs)
scaffold0544 (46-85)||(10694-10733)
[»] scaffold0097 (1 HSPs)
scaffold0097 (46-85)||(13620-13659)
[»] scaffold0050 (1 HSPs)
scaffold0050 (47-86)||(20978-21017)
[»] scaffold0189 (1 HSPs)
scaffold0189 (47-85)||(11210-11248)
[»] scaffold0221 (1 HSPs)
scaffold0221 (47-92)||(20479-20524)
[»] scaffold0031 (1 HSPs)
scaffold0031 (43-88)||(80867-80912)
[»] scaffold0004 (1 HSPs)
scaffold0004 (45-85)||(96001-96041)


Alignment Details
Target: chr1 (Bit Score: 194; Significance: 1e-105; HSPs: 55)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 7 - 232
Target Start/End: Complemental strand, 23921051 - 23920826
Alignment:
Q  7 ttttcgcgtttgagggtgtaggaagcaattatgttggaatttatgcacggtgcataaggatttctttatgcaccataaccgctcccctctcaaggtatgt 106  Q
    |||||| ||||| ||||||||||| |||||||||||| ||||||||||| |||||||||||||| ||||||||||||||||||||||||| |||||||||    
T  23921051 ttttcgtgtttgggggtgtaggaaacaattatgttgggatttatgcacgatgcataaggatttccttatgcaccataaccgctcccctctaaaggtatgt 23920952  T
Q  107 ttggttggatggaatgtgatgtaatggagtagaacataatcatgtttcattgtttgaatttgtaaaaatcaataaagcataatctatagataatataata 206  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23920951 ttggttggatggaatgtgatgtaatggagtagaatataatcatgtttcattgtttgaatttgtaaaaatcaataaagcataatctatagataatataata 23920852  T
Q  207 aagcaaacttagtattttggcaagtt 232  Q
    ||||||||||||||||||||||||||    
T  23920851 aagcaaacttagtattttggcaagtt 23920826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 15 - 92
Target Start/End: Original strand, 11422542 - 11422619
Alignment:
Q  15 tttgagggtgtaggaagcaattatgttggaatttatgcacggtgcataaggatttctttatgcaccataaccgctccc 92  Q
    |||| |||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||    
T  11422542 tttgggggtgtaggaagcaattatgttggaatttatgcacgatgcataaggatttccttatgcaccataaccgctccc 11422619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 15 - 93
Target Start/End: Original strand, 24636028 - 24636106
Alignment:
Q  15 tttgagggtgtaggaagcaattatgttggaatttatgcacggtgcataaggatttctttatgcaccataaccgctcccc 93  Q
    |||| |||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||| ||||||    
T  24636028 tttgggggtgtaggaagcaattatgttgggatttatgcacggtgcataaggatttccttatgcaccataaccactcccc 24636106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 15 - 92
Target Start/End: Original strand, 23817412 - 23817489
Alignment:
Q  15 tttgagggtgtaggaagcaattatgttggaatttatgcacggtgcataaggatttctttatgcaccataaccgctccc 92  Q
    |||| |||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||| |||||    
T  23817412 tttgggggtgtaggaagcaattatgttgggatttatgcacggtgcataaggatttccttatgcaccataaccactccc 23817489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 20 - 92
Target Start/End: Complemental strand, 48762290 - 48762218
Alignment:
Q  20 gggtgtaggaagcaattatgttggaatttatgcacggtgcataaggatttctttatgcaccataaccgctccc 92  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||| |||||    
T  48762290 gggtgtaggaagcaattatgttgggatttatgcacggtgcataaggatttccttatgcaccataaccactccc 48762218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 22 - 93
Target Start/End: Original strand, 180832 - 180903
Alignment:
Q  22 gtgtaggaagcaattatgttggaatttatgcacggtgcataaggatttctttatgcaccataaccgctcccc 93  Q
    |||||||||||||||||||||| |||||| |||||||||||||||||||||||| |||||||||||||||||    
T  180832 gtgtaggaagcaattatgttgggatttatacacggtgcataaggatttctttatacaccataaccgctcccc 180903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 15 - 86
Target Start/End: Complemental strand, 49936901 - 49936830
Alignment:
Q  15 tttgagggtgtaggaagcaattatgttggaatttatgcacggtgcataaggatttctttatgcaccataacc 86  Q
    |||| |||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||    
T  49936901 tttgggggtgtaggaagcaattatgttgggatttatgcacggtgcataaggatttccttatgcaccataacc 49936830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 15 - 93
Target Start/End: Original strand, 43452644 - 43452722
Alignment:
Q  15 tttgagggtgtaggaagcaattatgttggaatttatgcacggtgcataaggatttctttatgcaccataaccgctcccc 93  Q
    |||| ||||||||||| |||||||||||| |||||||||||||||||||||||||| ||||||||||||||| ||||||    
T  43452644 tttgggggtgtaggaaacaattatgttgggatttatgcacggtgcataaggatttccttatgcaccataaccactcccc 43452722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 15 - 92
Target Start/End: Original strand, 16976057 - 16976134
Alignment:
Q  15 tttgagggtgtaggaagcaattatgttggaatttatgcacggtgcataaggatttctttatgcaccataaccgctccc 92  Q
    |||| |||||||||||||||||||||| | |||||||||||||||||||||||||| ||||||||||||||| |||||    
T  16976057 tttgggggtgtaggaagcaattatgttaggatttatgcacggtgcataaggatttccttatgcaccataaccactccc 16976134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 21 - 92
Target Start/End: Complemental strand, 19897718 - 19897647
Alignment:
Q  21 ggtgtaggaagcaattatgttggaatttatgcacggtgcataaggatttctttatgcaccataaccgctccc 92  Q
    ||||||||||||||||||||||| |||| ||||||||||||||||||||| ||||||||||||||| |||||    
T  19897718 ggtgtaggaagcaattatgttgggatttctgcacggtgcataaggatttccttatgcaccataaccactccc 19897647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 21 - 92
Target Start/End: Complemental strand, 21641660 - 21641589
Alignment:
Q  21 ggtgtaggaagcaattatgttggaatttatgcacggtgcataaggatttctttatgcaccataaccgctccc 92  Q
    ||||||||||||||||||||||| |||| ||||||||||||||||||||| ||||||| |||||||||||||    
T  21641660 ggtgtaggaagcaattatgttgggatttgtgcacggtgcataaggatttccttatgcagcataaccgctccc 21641589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 15 - 90
Target Start/End: Complemental strand, 23174474 - 23174399
Alignment:
Q  15 tttgagggtgtaggaagcaattatgttggaatttatgcacggtgcataaggatttctttatgcaccataaccgctc 90  Q
    |||| |||||||||||||||||||||||| |||||||||||||||||||| ||||  |||||||||||||||||||    
T  23174474 tttgggggtgtaggaagcaattatgttgggatttatgcacggtgcataagaattttcttatgcaccataaccgctc 23174399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 15 - 92
Target Start/End: Complemental strand, 4097181 - 4097105
Alignment:
Q  15 tttgagggtgtaggaagcaattatgttggaatttatgcacggtgcataaggatttctttatgcaccataaccgctccc 92  Q
    |||| |||||||||||||||||||||||| ||||| |||||||||||||||| ||| |||||||||||||||||||||    
T  4097181 tttgggggtgtaggaagcaattatgttgggatttaagcacggtgcataagga-ttccttatgcaccataaccgctccc 4097105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 15 - 92
Target Start/End: Complemental strand, 20434686 - 20434609
Alignment:
Q  15 tttgagggtgtaggaagcaattatgttggaatttatgcacggtgcataaggatttctttatgcaccataaccgctccc 92  Q
    |||| |||||||||||||||||||||||| ||||||||| ||||||||| |||||| ||||||||||||||| |||||    
T  20434686 tttgggggtgtaggaagcaattatgttgggatttatgcatggtgcataatgatttccttatgcaccataaccactccc 20434609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 23 - 94
Target Start/End: Original strand, 6314226 - 6314297
Alignment:
Q  23 tgtaggaagcaattatgttggaatttatgcacggtgcataaggatttctttatgcaccataaccgctcccct 94  Q
    ||||||||||||||||||||| ||||||  |||||||||||||||||| ||||||||||||||| |||||||    
T  6314226 tgtaggaagcaattatgttgggatttatatacggtgcataaggatttccttatgcaccataaccactcccct 6314297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 15 - 85
Target Start/End: Original strand, 18618937 - 18619006
Alignment:
Q  15 tttgagggtgtaggaagcaattatgttggaatttatgcacggtgcataaggatttctttatgcaccataac 85  Q
    |||| |||||||||||||||||||||||| |||||||||||||||||||||| ||| ||||||||||||||    
T  18618937 tttgggggtgtaggaagcaattatgttgggatttatgcacggtgcataagga-ttccttatgcaccataac 18619006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 15 - 93
Target Start/End: Complemental strand, 25888992 - 25888915
Alignment:
Q  15 tttgagggtgtaggaagcaattatgttggaatttatgcacggtgcataaggatttctttatgcaccataaccgctcccc 93  Q
    |||| |||||||||||||||||||||| | |||||||||||||||||||||| ||| ||||||||||||||| ||||||    
T  25888992 tttgggggtgtaggaagcaattatgttaggatttatgcacggtgcataagga-ttccttatgcaccataaccactcccc 25888915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 15 - 66
Target Start/End: Original strand, 50351905 - 50351956
Alignment:
Q  15 tttgagggtgtaggaagcaattatgttggaatttatgcacggtgcataagga 66  Q
    |||| |||||||||||||||||||||||| ||||||||||||||||||||||    
T  50351905 tttgggggtgtaggaagcaattatgttgggatttatgcacggtgcataagga 50351956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 45 - 92
Target Start/End: Original strand, 18057811 - 18057858
Alignment:
Q  45 atttatgcacggtgcataaggatttctttatgcaccataaccgctccc 92  Q
    |||||||||||||||||||||||||| |||| ||||||||||||||||    
T  18057811 atttatgcacggtgcataaggatttccttatacaccataaccgctccc 18057858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 41 - 92
Target Start/End: Original strand, 31084400 - 31084451
Alignment:
Q  41 tggaatttatgcacggtgcataaggatttctttatgcaccataaccgctccc 92  Q
    ||||||||||||||||| |||||||||||| ||||||||||||||| |||||    
T  31084400 tggaatttatgcacggtacataaggatttccttatgcaccataaccactccc 31084451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 41 - 92
Target Start/End: Original strand, 45890591 - 45890642
Alignment:
Q  41 tggaatttatgcacggtgcataaggatttctttatgcaccataaccgctccc 92  Q
    |||||||||||||||||||||||||||||  |||| ||||||||||||||||    
T  45890591 tggaatttatgcacggtgcataaggattttcttatacaccataaccgctccc 45890642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 43 - 88
Target Start/End: Original strand, 1395351 - 1395396
Alignment:
Q  43 gaatttatgcacggtgcataaggatttctttatgcaccataaccgc 88  Q
    ||||||||||| |||||||||||||||| |||||||||||||||||    
T  1395351 gaatttatgcatggtgcataaggatttccttatgcaccataaccgc 1395396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 43 - 88
Target Start/End: Complemental strand, 10974677 - 10974632
Alignment:
Q  43 gaatttatgcacggtgcataaggatttctttatgcaccataaccgc 88  Q
    ||||||||||| |||||||||||||||| |||||||||||||||||    
T  10974677 gaatttatgcagggtgcataaggatttccttatgcaccataaccgc 10974632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 43 - 88
Target Start/End: Complemental strand, 14229216 - 14229171
Alignment:
Q  43 gaatttatgcacggtgcataaggatttctttatgcaccataaccgc 88  Q
    ||||||||||| |||||||||||||||| |||||||||||||||||    
T  14229216 gaatttatgcagggtgcataaggatttccttatgcaccataaccgc 14229171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 43 - 88
Target Start/End: Original strand, 17893273 - 17893318
Alignment:
Q  43 gaatttatgcacggtgcataaggatttctttatgcaccataaccgc 88  Q
    ||||||||||| |||||||||||||||| |||||||||||||||||    
T  17893273 gaatttatgcagggtgcataaggatttccttatgcaccataaccgc 17893318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 45 - 94
Target Start/End: Complemental strand, 21255882 - 21255833
Alignment:
Q  45 atttatgcacggtgcataaggatttctttatgcaccataaccgctcccct 94  Q
    |||||||||||||| ||||||||||| ||||||||||||||| |||||||    
T  21255882 atttatgcacggtgtataaggatttccttatgcaccataaccactcccct 21255833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 45 - 94
Target Start/End: Complemental strand, 33157034 - 33156985
Alignment:
Q  45 atttatgcacggtgcataaggatttctttatgcaccataaccgctcccct 94  Q
    ||||||||| |||||||||||||||| ||||||||||||||||| |||||    
T  33157034 atttatgcagggtgcataaggatttccttatgcaccataaccgcacccct 33156985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 45 - 93
Target Start/End: Original strand, 42134135 - 42134183
Alignment:
Q  45 atttatgcacggtgcataaggatttctttatgcaccataaccgctcccc 93  Q
    ||||||||| |||||||||||||||| ||||||||||||||||| ||||    
T  42134135 atttatgcagggtgcataaggatttccttatgcaccataaccgcgcccc 42134183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 45 - 88
Target Start/End: Original strand, 9628601 - 9628644
Alignment:
Q  45 atttatgcacggtgcataaggatttctttatgcaccataaccgc 88  Q
    ||||||||| |||||||||||||||| |||||||||||||||||    
T  9628601 atttatgcagggtgcataaggatttccttatgcaccataaccgc 9628644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 46 - 85
Target Start/End: Complemental strand, 18056830 - 18056791
Alignment:
Q  46 tttatgcacggtgcataaggatttctttatgcaccataac 85  Q
    ||||||||||||||||||||||||| ||||||||||||||    
T  18056830 tttatgcacggtgcataaggatttccttatgcaccataac 18056791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 43 - 94
Target Start/End: Complemental strand, 31763819 - 31763768
Alignment:
Q  43 gaatttatgcacggtgcataaggatttctttatgcaccataaccgctcccct 94  Q
    ||||||||||| |||| ||||||||||| ||||||||||||||||| |||||    
T  31763819 gaatttatgcagggtgtataaggatttccttatgcaccataaccgcacccct 31763768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 47 - 93
Target Start/End: Original strand, 9041055 - 9041101
Alignment:
Q  47 ttatgcacggtgcataaggatttctttatgcaccataaccgctcccc 93  Q
    ||||||| |||||||||||||||| ||||||||||||||||| ||||    
T  9041055 ttatgcagggtgcataaggatttccttatgcaccataaccgcacccc 9041101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 42 - 88
Target Start/End: Original strand, 12070609 - 12070655
Alignment:
Q  42 ggaatttatgcacggtgcataaggatttctttatgcaccataaccgc 88  Q
    |||||||||||| |||||||||| ||||| |||||||||||||||||    
T  12070609 ggaatttatgcagggtgcataagaatttccttatgcaccataaccgc 12070655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 45 - 95
Target Start/End: Complemental strand, 18952449 - 18952399
Alignment:
Q  45 atttatgcacggtgcataaggatttctttatgcaccataaccgctcccctc 95  Q
    ||||||| | ||||||||||||||||||||||||| |||||||| ||||||    
T  18952449 atttatgtagggtgcataaggatttctttatgcacgataaccgcgcccctc 18952399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 45 - 91
Target Start/End: Complemental strand, 23319057 - 23319011
Alignment:
Q  45 atttatgcacggtgcataaggatttctttatgcaccataaccgctcc 91  Q
    |||||||||| ||||||||||||||| |||| |||||||||||||||    
T  23319057 atttatgcacagtgcataaggatttccttatccaccataaccgctcc 23319011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 21 - 63
Target Start/End: Original strand, 34370495 - 34370537
Alignment:
Q  21 ggtgtaggaagcaattatgttggaatttatgcacggtgcataa 63  Q
    ||||||||||||||||||||| | |||||||||||||||||||    
T  34370495 ggtgtaggaagcaattatgttaggatttatgcacggtgcataa 34370537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 21 - 66
Target Start/End: Complemental strand, 8401468 - 8401423
Alignment:
Q  21 ggtgtaggaagcaattatgttggaatttatgcacggtgcataagga 66  Q
    |||||||||| |||||||||||| ||||||||||||| ||||||||    
T  8401468 ggtgtaggaaacaattatgttgggatttatgcacggtacataagga 8401423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 43 - 88
Target Start/End: Original strand, 17811283 - 17811328
Alignment:
Q  43 gaatttatgcacggtgcataaggatttctttatgcaccataaccgc 88  Q
    |||||||| || |||||||||||||||| |||||||||||||||||    
T  17811283 gaatttatacagggtgcataaggatttccttatgcaccataaccgc 17811328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 45 - 86
Target Start/End: Complemental strand, 17893114 - 17893073
Alignment:
Q  45 atttatgcacggtgcataaggatttctttatgcaccataacc 86  Q
    ||||||||| |||||||||||||||| |||||||||||||||    
T  17893114 atttatgcagggtgcataaggatttccttatgcaccataacc 17893073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 45 - 93
Target Start/End: Original strand, 18928957 - 18929005
Alignment:
Q  45 atttatgcacggtgcataaggatttctttatgcaccataaccgctcccc 93  Q
    ||||||||| ||||||||| |||||| ||||||||||||||||| ||||    
T  18928957 atttatgcagggtgcataaagatttccttatgcaccataaccgcgcccc 18929005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 44 - 88
Target Start/End: Original strand, 29945417 - 29945461
Alignment:
Q  44 aatttatgcacggtgcataaggatttctttatgcaccataaccgc 88  Q
    ||||||||||  ||||||||||||||| |||||||||||||||||    
T  29945417 aatttatgcagagtgcataaggatttccttatgcaccataaccgc 29945461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 45 - 93
Target Start/End: Complemental strand, 32595146 - 32595098
Alignment:
Q  45 atttatgcacggtgcataaggatttctttatgcaccataaccgctcccc 93  Q
    ||||||||| |||||||||| ||||| ||||||||||||||||| ||||    
T  32595146 atttatgcagggtgcataagaatttccttatgcaccataaccgcacccc 32595098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 45 - 88
Target Start/End: Complemental strand, 12796465 - 12796422
Alignment:
Q  45 atttatgcacggtgcataaggatttctttatgcaccataaccgc 88  Q
    ||||||||| |||||| ||||||||| |||||||||||||||||    
T  12796465 atttatgcaaggtgcagaaggatttccttatgcaccataaccgc 12796422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 45 - 88
Target Start/End: Original strand, 14229363 - 14229406
Alignment:
Q  45 atttatgcacggtgcataaggatttctttatgcaccataaccgc 88  Q
    ||||||||| ||||||||| |||||| |||||||||||||||||    
T  14229363 atttatgcagggtgcataaagatttccttatgcaccataaccgc 14229406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 46 - 85
Target Start/End: Complemental strand, 22348085 - 22348046
Alignment:
Q  46 tttatgcacggtgcataaggatttctttatgcaccataac 85  Q
    ||||||| ||||||||||||||||| ||||||||||||||    
T  22348085 tttatgcgcggtgcataaggatttccttatgcaccataac 22348046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 45 - 88
Target Start/End: Original strand, 31763975 - 31764018
Alignment:
Q  45 atttatgcacggtgcataaggatttctttatgcaccataaccgc 88  Q
    ||||||| | |||||||||||||||| |||||||||||||||||    
T  31763975 atttatgtagggtgcataaggatttccttatgcaccataaccgc 31764018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 45 - 88
Target Start/End: Original strand, 32143771 - 32143814
Alignment:
Q  45 atttatgcacggtgcataaggatttctttatgcaccataaccgc 88  Q
    |||||||||  ||||||||||||||| |||||||||||||||||    
T  32143771 atttatgcagagtgcataaggatttccttatgcaccataaccgc 32143814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 45 - 88
Target Start/End: Complemental strand, 42133986 - 42133943
Alignment:
Q  45 atttatgcacggtgcataaggatttctttatgcaccataaccgc 88  Q
    ||||||||| | |||||||||||||| |||||||||||||||||    
T  42133986 atttatgcaggatgcataaggatttccttatgcaccataaccgc 42133943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 45 - 84
Target Start/End: Complemental strand, 45849150 - 45849111
Alignment:
Q  45 atttatgcacggtgcataaggatttctttatgcaccataa 84  Q
    ||||||||| |||||||||||||||| |||||||||||||    
T  45849150 atttatgcagggtgcataaggatttccttatgcaccataa 45849111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 43 - 88
Target Start/End: Original strand, 11354511 - 11354556
Alignment:
Q  43 gaatttatgcacggtgcataaggatttctttatgcaccataaccgc 88  Q
    |||||||||||  ||||||||||||||  |||||||||||||||||    
T  11354511 gaatttatgcagagtgcataaggatttgcttatgcaccataaccgc 11354556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 45 - 82
Target Start/End: Complemental strand, 18928820 - 18928783
Alignment:
Q  45 atttatgcacggtgcataaggatttctttatgcaccat 82  Q
    ||||||||| |||||||||||||||| |||||||||||    
T  18928820 atttatgcagggtgcataaggatttccttatgcaccat 18928783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 45 - 86
Target Start/End: Original strand, 32595285 - 32595326
Alignment:
Q  45 atttatgcacggtgcataaggatttctttatgcaccataacc 86  Q
    ||||| ||| |||||||||||||||| |||||||||||||||    
T  32595285 atttaagcagggtgcataaggatttccttatgcaccataacc 32595326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 56 - 93
Target Start/End: Complemental strand, 49992549 - 49992512
Alignment:
Q  56 gtgcataaggatttctttatgcaccataaccgctcccc 93  Q
    ||||||||||||||| ||||||||||||||||| ||||    
T  49992549 gtgcataaggatttccttatgcaccataaccgcacccc 49992512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 44 - 88
Target Start/End: Original strand, 14390045 - 14390089
Alignment:
Q  44 aatttatgcacggtgcataaggatttctttatgcaccataaccgc 88  Q
    |||||||||| ||||||||||||  || |||||||||||||||||    
T  14390045 aatttatgcagggtgcataaggaaatccttatgcaccataaccgc 14390089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 46 - 78
Target Start/End: Complemental strand, 16115897 - 16115865
Alignment:
Q  46 tttatgcacggtgcataaggatttctttatgca 78  Q
    ||||||||||||||||||||||||| |||||||    
T  16115897 tttatgcacggtgcataaggatttccttatgca 16115865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 70; Significance: 1e-31; HSPs: 78)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 50644628 - 50644713
Alignment:
Q  1 aatttgttttcgcgtttgagggtgtaggaagcaattatgttggaatttatgcacggtgcataaggatttctttatgcaccataacc 86  Q
    |||||||||||||||||| |||| ||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||    
T  50644628 aatttgttttcgcgtttgggggtataggaagcaattatgttgggatttatgcacggtgcataaggatttccttatgcaccataacc 50644713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 15 - 92
Target Start/End: Original strand, 10473620 - 10473697
Alignment:
Q  15 tttgagggtgtaggaagcaattatgttggaatttatgcacggtgcataaggatttctttatgcaccataaccgctccc 92  Q
    |||| |||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  10473620 tttgggggtgtaggaagcaattaggttggaatttatgcacggtgcataaggatttccttatgcaccataaccgctccc 10473697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 15 - 92
Target Start/End: Original strand, 45256867 - 45256944
Alignment:
Q  15 tttgagggtgtaggaagcaattatgttggaatttatgcacggtgcataaggatttctttatgcaccataaccgctccc 92  Q
    |||| |||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||    
T  45256867 tttgggggtgtaggaagcaattatgttgggatttatgcacggtgcataaggatttccttatgcaccataaccgctccc 45256944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 15 - 91
Target Start/End: Complemental strand, 26577333 - 26577257
Alignment:
Q  15 tttgagggtgtaggaagcaattatgttggaatttatgcacggtgcataaggatttctttatgcaccataaccgctcc 91  Q
    |||| ||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||    
T  26577333 tttgggggtgtaggaagcaattatgttgaaatttatgcacggtgcataaggatttccttatgcaccataaccgctcc 26577257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 15 - 92
Target Start/End: Complemental strand, 49426021 - 49425944
Alignment:
Q  15 tttgagggtgtaggaagcaattatgttggaatttatgcacggtgcataaggatttctttatgcaccataaccgctccc 92  Q
    |||| |||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||| |||||    
T  49426021 tttgggggtgtaggaagcaattatgttgggatttatgcacggtgcataaggatttccttatgcaccataaccactccc 49425944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 15 - 92
Target Start/End: Original strand, 53441422 - 53441499
Alignment:
Q  15 tttgagggtgtaggaagcaattatgttggaatttatgcacggtgcataaggatttctttatgcaccataaccgctccc 92  Q
    |||| ||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||| |||||    
T  53441422 tttgggggtgtaggaagcaattatgttggaatttatgcccggtgcataaggatttccttatgcaccataaccactccc 53441499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 20 - 92
Target Start/End: Original strand, 11786081 - 11786153
Alignment:
Q  20 gggtgtaggaagcaattatgttggaatttatgcacggtgcataaggatttctttatgcaccataaccgctccc 92  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||| |||||    
T  11786081 gggtgtaggaagcaattatgttgggatttatgcacggtgcataaggatttccttatgcaccataaccactccc 11786153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 20 - 92
Target Start/End: Original strand, 11798248 - 11798320
Alignment:
Q  20 gggtgtaggaagcaattatgttggaatttatgcacggtgcataaggatttctttatgcaccataaccgctccc 92  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||| |||||    
T  11798248 gggtgtaggaagcaattatgttgggatttatgcacggtgcataaggatttccttatgcaccataaccactccc 11798320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 15 - 86
Target Start/End: Complemental strand, 13635689 - 13635618
Alignment:
Q  15 tttgagggtgtaggaagcaattatgttggaatttatgcacggtgcataaggatttctttatgcaccataacc 86  Q
    |||| |||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||    
T  13635689 tttgggggtgtaggaagcaattatgttgggatttatgcacggtgcataaggatttccttatgcaccataacc 13635618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 20 - 86
Target Start/End: Original strand, 30597806 - 30597872
Alignment:
Q  20 gggtgtaggaagcaattatgttggaatttatgcacggtgcataaggatttctttatgcaccataacc 86  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||    
T  30597806 gggtgtaggaagcaattatgttgggatttatgcacggtgcataaggatttccttatgcaccataacc 30597872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 15 - 84
Target Start/End: Original strand, 638966 - 639035
Alignment:
Q  15 tttgagggtgtaggaagcaattatgttggaatttatgcacggtgcataaggatttctttatgcaccataa 84  Q
    |||| |||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||    
T  638966 tttgggggtgtaggaagcaattatgttgggatttatgcacggtgcataaggatttccttatgcaccataa 639035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 15 - 92
Target Start/End: Complemental strand, 15051100 - 15051023
Alignment:
Q  15 tttgagggtgtaggaagcaattatgttggaatttatgcacggtgcataaggatttctttatgcaccataaccgctccc 92  Q
    |||| |||||||||||||||||||||| | |||||||||||||||||||||||||| ||||||||||||||| |||||    
T  15051100 tttgggggtgtaggaagcaattatgttaggatttatgcacggtgcataaggatttccttatgcaccataaccactccc 15051023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 22 - 85
Target Start/End: Complemental strand, 49492469 - 49492406
Alignment:
Q  22 gtgtaggaagcaattatgttggaatttatgcacggtgcataaggatttctttatgcaccataac 85  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||    
T  49492469 gtgtaggaagcaattatgttgggatttatgcacggtgcataaggatttccttatgcaccataac 49492406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 15 - 93
Target Start/End: Complemental strand, 27865701 - 27865623
Alignment:
Q  15 tttgagggtgtaggaagcaattatgttggaatttatgcacggtgcataaggatttctttatgcaccataaccgctcccc 93  Q
    |||| |||||||||||||||||||||||| ||||||||| |||||||||||||||| |||| |||||||||| ||||||    
T  27865701 tttgggggtgtaggaagcaattatgttgggatttatgcatggtgcataaggatttccttatacaccataaccactcccc 27865623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 15 - 78
Target Start/End: Complemental strand, 51921229 - 51921166
Alignment:
Q  15 tttgagggtgtaggaagcaattatgttggaatttatgcacggtgcataaggatttctttatgca 78  Q
    |||| |||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||    
T  51921229 tttgggggtgtaggaagcaattatgttgggatttatgcacggtgcataaggatttccttatgca 51921166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 20 - 90
Target Start/End: Complemental strand, 51836394 - 51836324
Alignment:
Q  20 gggtgtaggaagcaattatgttggaatttatgcacggtgcataaggatttctttatgcaccataaccgctc 90  Q
    |||||||||||||||||||||||| ||||||||||| |||||||  ||||| |||||||||||||||||||    
T  51836394 gggtgtaggaagcaattatgttgggatttatgcacgatgcataaaaatttccttatgcaccataaccgctc 51836324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 15 - 76
Target Start/End: Complemental strand, 35291512 - 35291451
Alignment:
Q  15 tttgagggtgtaggaagcaattatgttggaatttatgcacggtgcataaggatttctttatg 76  Q
    |||| |||||||||||||||||||||||| |||||||||||||||||||||||||| |||||    
T  35291512 tttgggggtgtaggaagcaattatgttgggatttatgcacggtgcataaggatttccttatg 35291451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 20 - 92
Target Start/End: Original strand, 46672545 - 46672617
Alignment:
Q  20 gggtgtaggaagcaattatgttggaatttatgcacggtgcataaggatttctttatgcaccataaccgctccc 92  Q
    |||||||||||||||| ||||||| ||||||||||| |||||||| ||||| ||||||| ||||||| |||||    
T  46672545 gggtgtaggaagcaatcatgttgggatttatgcacgatgcataagaatttccttatgcaacataaccactccc 46672617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 45 - 92
Target Start/End: Complemental strand, 22180248 - 22180201
Alignment:
Q  45 atttatgcacggtgcataaggatttctttatgcaccataaccgctccc 92  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||    
T  22180248 atttatgcacggtgcataaggatttccttatgcaccataaccgctccc 22180201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 43 - 103
Target Start/End: Original strand, 55660442 - 55660503
Alignment:
Q  43 gaatttatgcacggtgcataaggatttctttatgcaccataa-ccgctcccctctcaaggta 103  Q
    ||||||||||| ||||||||| |||||||||||||||||||| |||| ||||||||||||||    
T  55660442 gaatttatgcaaggtgcataaagatttctttatgcaccataacccgcacccctctcaaggta 55660503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 45 - 92
Target Start/End: Original strand, 30358839 - 30358886
Alignment:
Q  45 atttatgcacggtgcataaggatttctttatgcaccataaccgctccc 92  Q
    |||||||||||||||||||||||||| ||||||||||||||| |||||    
T  30358839 atttatgcacggtgcataaggatttccttatgcaccataaccactccc 30358886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 43 - 88
Target Start/End: Complemental strand, 2124388 - 2124343
Alignment:
Q  43 gaatttatgcacggtgcataaggatttctttatgcaccataaccgc 88  Q
    ||||||||||| |||||||||||||||| |||||||||||||||||    
T  2124388 gaatttatgcagggtgcataaggatttccttatgcaccataaccgc 2124343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 43 - 88
Target Start/End: Complemental strand, 6841865 - 6841820
Alignment:
Q  43 gaatttatgcacggtgcataaggatttctttatgcaccataaccgc 88  Q
    ||||||||||| |||||||||||||||| |||||||||||||||||    
T  6841865 gaatttatgcagggtgcataaggatttccttatgcaccataaccgc 6841820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 43 - 88
Target Start/End: Original strand, 31763108 - 31763153
Alignment:
Q  43 gaatttatgcacggtgcataaggatttctttatgcaccataaccgc 88  Q
    ||||||||||| |||||||||||||||| |||||||||||||||||    
T  31763108 gaatttatgcagggtgcataaggatttccttatgcaccataaccgc 31763153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 45 - 88
Target Start/End: Complemental strand, 1492714 - 1492671
Alignment:
Q  45 atttatgcacggtgcataaggatttctttatgcaccataaccgc 88  Q
    ||||||||| |||||||||||||||| |||||||||||||||||    
T  1492714 atttatgcagggtgcataaggatttccttatgcaccataaccgc 1492671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 45 - 88
Target Start/End: Complemental strand, 8165804 - 8165761
Alignment:
Q  45 atttatgcacggtgcataaggatttctttatgcaccataaccgc 88  Q
    ||||||||| |||||||||||||||| |||||||||||||||||    
T  8165804 atttatgcagggtgcataaggatttccttatgcaccataaccgc 8165761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 45 - 88
Target Start/End: Original strand, 17109920 - 17109963
Alignment:
Q  45 atttatgcacggtgcataaggatttctttatgcaccataaccgc 88  Q
    ||||||||| |||||||||||||||| |||||||||||||||||    
T  17109920 atttatgcagggtgcataaggatttccttatgcaccataaccgc 17109963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 45 - 92
Target Start/End: Original strand, 21098134 - 21098181
Alignment:
Q  45 atttatgcacggtgcataaggatttctttatgcaccataaccgctccc 92  Q
    ||||||||| |||||||||||||||| |||| ||||||||||||||||    
T  21098134 atttatgcatggtgcataaggatttccttatacaccataaccgctccc 21098181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 45 - 88
Target Start/End: Complemental strand, 21995712 - 21995669
Alignment:
Q  45 atttatgcacggtgcataaggatttctttatgcaccataaccgc 88  Q
    ||||||||| |||||||||||||||| |||||||||||||||||    
T  21995712 atttatgcagggtgcataaggatttccttatgcaccataaccgc 21995669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 46 - 85
Target Start/End: Original strand, 22181264 - 22181303
Alignment:
Q  46 tttatgcacggtgcataaggatttctttatgcaccataac 85  Q
    ||||||||||||||||||||||||| ||||||||||||||    
T  22181264 tttatgcacggtgcataaggatttccttatgcaccataac 22181303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 46 - 85
Target Start/End: Complemental strand, 27764286 - 27764247
Alignment:
Q  46 tttatgcacggtgcataaggatttctttatgcaccataac 85  Q
    ||||||||||||||||||||||||| ||||||||||||||    
T  27764286 tttatgcacggtgcataaggatttccttatgcaccataac 27764247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 45 - 88
Target Start/End: Complemental strand, 30779385 - 30779342
Alignment:
Q  45 atttatgcacggtgcataaggatttctttatgcaccataaccgc 88  Q
    ||||||||| |||||||||||||||| |||||||||||||||||    
T  30779385 atttatgcaaggtgcataaggatttccttatgcaccataaccgc 30779342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 45 - 88
Target Start/End: Complemental strand, 33819733 - 33819690
Alignment:
Q  45 atttatgcacggtgcataaggatttctttatgcaccataaccgc 88  Q
    ||||||||| |||||||||||||||| |||||||||||||||||    
T  33819733 atttatgcagggtgcataaggatttccttatgcaccataaccgc 33819690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 46 - 85
Target Start/End: Original strand, 36621720 - 36621759
Alignment:
Q  46 tttatgcacggtgcataaggatttctttatgcaccataac 85  Q
    ||||||||||||||||||||||||| ||||||||||||||    
T  36621720 tttatgcacggtgcataaggatttccttatgcaccataac 36621759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 45 - 88
Target Start/End: Complemental strand, 36924283 - 36924240
Alignment:
Q  45 atttatgcacggtgcataaggatttctttatgcaccataaccgc 88  Q
    ||||||||| |||||||||||||||| |||||||||||||||||    
T  36924283 atttatgcagggtgcataaggatttccttatgcaccataaccgc 36924240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 45 - 88
Target Start/End: Complemental strand, 37059753 - 37059710
Alignment:
Q  45 atttatgcacggtgcataaggatttctttatgcaccataaccgc 88  Q
    ||||||||| |||||||||||||||| |||||||||||||||||    
T  37059753 atttatgcaaggtgcataaggatttccttatgcaccataaccgc 37059710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 46 - 85
Target Start/End: Complemental strand, 45256021 - 45255982
Alignment:
Q  46 tttatgcacggtgcataaggatttctttatgcaccataac 85  Q
    ||||||||||||||||||||||||| ||||||||||||||    
T  45256021 tttatgcacggtgcataaggatttccttatgcaccataac 45255982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 46 - 85
Target Start/End: Complemental strand, 50643789 - 50643750
Alignment:
Q  46 tttatgcacggtgcataaggatttctttatgcaccataac 85  Q
    ||||||||||||||||||||||||| ||||||||||||||    
T  50643789 tttatgcacggtgcataaggatttccttatgcaccataac 50643750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 45 - 88
Target Start/End: Original strand, 53865245 - 53865288
Alignment:
Q  45 atttatgcacggtgcataaggatttctttatgcaccataaccgc 88  Q
    ||||||||| |||||||||||||||| |||||||||||||||||    
T  53865245 atttatgcagggtgcataaggatttccttatgcaccataaccgc 53865288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 43 - 88
Target Start/End: Complemental strand, 562819 - 562774
Alignment:
Q  43 gaatttatgcacggtgcataaggatttctttatgcaccataaccgc 88  Q
    ||||||||||| |||||||| ||||||| |||||||||||||||||    
T  562819 gaatttatgcagggtgcatagggatttccttatgcaccataaccgc 562774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 57
Target Start/End: Original strand, 1621983 - 1622020
Alignment:
Q  20 gggtgtaggaagcaattatgttggaatttatgcacggt 57  Q
    |||||||||||||||||||||||| |||||||||||||    
T  1621983 gggtgtaggaagcaattatgttgggatttatgcacggt 1622020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 43 - 88
Target Start/End: Original strand, 9813145 - 9813190
Alignment:
Q  43 gaatttatgcacggtgcataaggatttctttatgcaccataaccgc 88  Q
    ||||||||||| ||||||||| |||||| |||||||||||||||||    
T  9813145 gaatttatgcagggtgcataaagatttccttatgcaccataaccgc 9813190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 45 - 94
Target Start/End: Original strand, 12722940 - 12722989
Alignment:
Q  45 atttatgcacggtgcataaggatttctttatgcaccataaccgctcccct 94  Q
    ||||||||| |||||||||| ||||| ||||||||||||||||| |||||    
T  12722940 atttatgcagggtgcataagaatttccttatgcaccataaccgcacccct 12722989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 45 - 86
Target Start/End: Complemental strand, 25715685 - 25715644
Alignment:
Q  45 atttatgcacggtgcataaggatttctttatgcaccataacc 86  Q
    ||||||||| |||||||||||||||| |||||||||||||||    
T  25715685 atttatgcagggtgcataaggatttccttatgcaccataacc 25715644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 45 - 94
Target Start/End: Original strand, 25715729 - 25715778
Alignment:
Q  45 atttatgcacggtgcataaggatttctttatgcaccataaccgctcccct 94  Q
    ||||||||| |||||||||||||||  ||||||||||||||||| |||||    
T  25715729 atttatgcagggtgcataaggattttcttatgcaccataaccgcacccct 25715778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 43 - 88
Target Start/End: Complemental strand, 31762973 - 31762928
Alignment:
Q  43 gaatttatgcacggtgcataaggatttctttatgcaccataaccgc 88  Q
    ||||||||||| | |||||||||||||| |||||||||||||||||    
T  31762973 gaatttatgcaggatgcataaggatttccttatgcaccataaccgc 31762928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 43 - 88
Target Start/End: Complemental strand, 33883338 - 33883293
Alignment:
Q  43 gaatttatgcacggtgcataaggatttctttatgcaccataaccgc 88  Q
    |||||||| || |||||||||||||||| |||||||||||||||||    
T  33883338 gaatttatacagggtgcataaggatttccttatgcaccataaccgc 33883293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 65
Target Start/End: Original strand, 36011950 - 36011995
Alignment:
Q  20 gggtgtaggaagcaattatgttggaatttatgcacggtgcataagg 65  Q
    |||||||||||||||||||||||  |||||| ||||||||||||||    
T  36011950 gggtgtaggaagcaattatgttgagatttatacacggtgcataagg 36011995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 43 - 88
Target Start/End: Complemental strand, 41025105 - 41025060
Alignment:
Q  43 gaatttatgcacggtgcataaggatttctttatgcaccataaccgc 88  Q
    ||||||||||| |||||||||||||||| ||||| |||||||||||    
T  41025105 gaatttatgcagggtgcataaggatttcattatgtaccataaccgc 41025060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 43 - 88
Target Start/End: Original strand, 43375521 - 43375566
Alignment:
Q  43 gaatttatgcacggtgcataaggatttctttatgcaccataaccgc 88  Q
    ||||||||||| ||||||||||||||||  ||||||||||||||||    
T  43375521 gaatttatgcagggtgcataaggatttccgtatgcaccataaccgc 43375566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 45 - 86
Target Start/End: Original strand, 54895585 - 54895626
Alignment:
Q  45 atttatgcacggtgcataaggatttctttatgcaccataacc 86  Q
    ||||||||| |||||||||||||||| |||||||||||||||    
T  54895585 atttatgcagggtgcataaggatttccttatgcaccataacc 54895626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 47 - 96
Target Start/End: Original strand, 55782641 - 55782690
Alignment:
Q  47 ttatgcacggtgcataaggatttctttatgcaccataaccgctcccctct 96  Q
    ||||||||||||||||||||  || ||||||||||||||| |||||||||    
T  55782641 ttatgcacggtgcataaggaaatccttatgcaccataaccactcccctct 55782690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 47 - 96
Target Start/End: Original strand, 55846821 - 55846870
Alignment:
Q  47 ttatgcacggtgcataaggatttctttatgcaccataaccgctcccctct 96  Q
    ||||||||||||||||||||  || ||||||||||||||| |||||||||    
T  55846821 ttatgcacggtgcataaggaaatccttatgcaccataaccactcccctct 55846870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 45 - 85
Target Start/End: Original strand, 8157291 - 8157331
Alignment:
Q  45 atttatgcacggtgcataaggatttctttatgcaccataac 85  Q
    ||||||||| |||||||||||||||| ||||||||||||||    
T  8157291 atttatgcagggtgcataaggatttccttatgcaccataac 8157331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 41 - 93
Target Start/End: Original strand, 18924285 - 18924332
Alignment:
Q  41 tggaatttatgcacggtgcataaggatttctttatgcaccataaccgctcccc 93  Q
    ||||||||||||||||||||||||||     ||||||||||||||||||||||    
T  18924285 tggaatttatgcacggtgcataagga-----ttatgcaccataaccgctcccc 18924332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 46 - 82
Target Start/End: Original strand, 26447431 - 26447467
Alignment:
Q  46 tttatgcacggtgcataaggatttctttatgcaccat 82  Q
    ||||||||||||||||||||||||| |||||||||||    
T  26447431 tttatgcacggtgcataaggatttccttatgcaccat 26447467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 43 - 87
Target Start/End: Original strand, 38010710 - 38010754
Alignment:
Q  43 gaatttatgcacggtgcataaggatttctttatgcaccataaccg 87  Q
    ||||||||||| ||||||||||||||||  |||||||||||||||    
T  38010710 gaatttatgcagggtgcataaggatttccgtatgcaccataaccg 38010754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 67
Target Start/End: Original strand, 55765587 - 55765635
Alignment:
Q  19 agggtgtaggaagcaattatgttggaatttatgcacggtgcataaggat 67  Q
    ||||| || ||||||||||| |||| |||||||||||||||||||||||    
T  55765587 agggtatatgaagcaattatattgggatttatgcacggtgcataaggat 55765635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 45 - 88
Target Start/End: Original strand, 2124547 - 2124590
Alignment:
Q  45 atttatgcacggtgcataaggatttctttatgcaccataaccgc 88  Q
    ||||||||| |||||||||| ||||| |||||||||||||||||    
T  2124547 atttatgcagggtgcataagaatttccttatgcaccataaccgc 2124590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 45 - 88
Target Start/End: Complemental strand, 17109761 - 17109718
Alignment:
Q  45 atttatgcacggtgcataaggatttctttatgcaccataaccgc 88  Q
    ||||||||| ||| |||||||||||| |||||||||||||||||    
T  17109761 atttatgcaaggtacataaggatttccttatgcaccataaccgc 17109718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 45 - 84
Target Start/End: Complemental strand, 36309458 - 36309419
Alignment:
Q  45 atttatgcacggtgcataaggatttctttatgcaccataa 84  Q
    ||||||||| |||||||||||||||| |||||||||||||    
T  36309458 atttatgcagggtgcataaggatttccttatgcaccataa 36309419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 45 - 88
Target Start/End: Original strand, 36309619 - 36309662
Alignment:
Q  45 atttatgcacggtgcataaggatttctttatgcaccataaccgc 88  Q
    ||||||||| |||||||||||||||  |||||||||||||||||    
T  36309619 atttatgcagggtgcataaggattttcttatgcaccataaccgc 36309662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 45 - 88
Target Start/End: Complemental strand, 43374489 - 43374446
Alignment:
Q  45 atttatgcacggtgcataaggatttctttatgcaccataaccgc 88  Q
    ||||||||| ||| |||||||||||| |||||||||||||||||    
T  43374489 atttatgcagggtacataaggatttccttatgcaccataaccgc 43374446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 45 - 88
Target Start/End: Complemental strand, 48076954 - 48076911
Alignment:
Q  45 atttatgcacggtgcataaggatttctttatgcaccataaccgc 88  Q
    |||||||||||||||||||||||||| |||||||  ||||||||    
T  48076954 atttatgcacggtgcataaggatttccttatgcatgataaccgc 48076911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 45 - 88
Target Start/End: Complemental strand, 54895446 - 54895403
Alignment:
Q  45 atttatgcacggtgcataaggatttctttatgcaccataaccgc 88  Q
    ||||||||| |||||||||||||||  |||||||||||||||||    
T  54895446 atttatgcagggtgcataaggattttcttatgcaccataaccgc 54895403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 47 - 85
Target Start/End: Original strand, 29826626 - 29826664
Alignment:
Q  47 ttatgcacggtgcataaggatttctttatgcaccataac 85  Q
    |||||||||||||||||||||||| ||||| ||||||||    
T  29826626 ttatgcacggtgcataaggatttccttatgtaccataac 29826664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 83
Target Start/End: Complemental strand, 51076939 - 51076901
Alignment:
Q  45 atttatgcacggtgcataaggatttctttatgcaccata 83  Q
    ||||||||| |||||||||||||||| ||||||||||||    
T  51076939 atttatgcagggtgcataaggatttccttatgcaccata 51076901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 42 - 88
Target Start/End: Original strand, 53526451 - 53526497
Alignment:
Q  42 ggaatttatgcacggtgcataaggatttctttatgcaccataaccgc 88  Q
    |||||||||||| ||| |||||| ||||| |||||||||||||||||    
T  53526451 ggaatttatgcagggtacataagaatttccttatgcaccataaccgc 53526497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 43 - 88
Target Start/End: Original strand, 1492861 - 1492906
Alignment:
Q  43 gaatttatgcacggtgcataaggatttctttatgcaccataaccgc 88  Q
    ||||||||||| ||||||||||||  || |||||||||||||||||    
T  1492861 gaatttatgcatggtgcataaggaaatccttatgcaccataaccgc 1492906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 45 - 94
Target Start/End: Complemental strand, 1728667 - 1728618
Alignment:
Q  45 atttatgcacggtgcataaggatttctttatgcaccataaccgctcccct 94  Q
    ||||||||||||| |||||| ||||  ||||||||||||||| |||||||    
T  1728667 atttatgcacggtacataagaattttcttatgcaccataaccactcccct 1728618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 55 - 88
Target Start/End: Complemental strand, 12722769 - 12722736
Alignment:
Q  55 ggtgcataaggatttctttatgcaccataaccgc 88  Q
    |||||||||||||||| |||||||||||||||||    
T  12722769 ggtgcataaggatttccttatgcaccataaccgc 12722736  T

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Target: chr4; HSP #72
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 43 - 88
Target Start/End: Original strand, 38563961 - 38564006
Alignment:
Q  43 gaatttatgcacggtgcataaggatttctttatgcaccataaccgc 88  Q
    ||||| ||||| | ||||||||||||| ||||||||||||||||||    
T  38563961 gaattcatgcaggatgcataaggatttttttatgcaccataaccgc 38564006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 47 - 92
Target Start/End: Complemental strand, 50070759 - 50070714
Alignment:
Q  47 ttatgcacggtgcataaggatttctttatgcaccataaccgctccc 92  Q
    ||||||||||||||||||||  || ||||||||||||||| |||||    
T  50070759 ttatgcacggtgcataaggaaatccttatgcaccataaccactccc 50070714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 91
Target Start/End: Complemental strand, 14499291 - 14499247
Alignment:
Q  47 ttatgcacggtgcataaggatttctttatgcaccataaccgctcc 91  Q
    ||||||||||||||||||||  || ||||||||||||||| ||||    
T  14499291 ttatgcacggtgcataaggaaatccttatgcaccataaccactcc 14499247  T

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Target: chr4; HSP #75
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 48 - 88
Target Start/End: Original strand, 33871283 - 33871323
Alignment:
Q  48 tatgcacggtgcataaggatttctttatgcaccataaccgc 88  Q
    |||||| |||||||||||||||| ||||||| |||||||||    
T  33871283 tatgcagggtgcataaggatttccttatgcatcataaccgc 33871323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 85
Target Start/End: Original strand, 33883485 - 33883525
Alignment:
Q  45 atttatgcacggtgcataaggatttctttatgcaccataac 85  Q
    ||||||||| ||||||||| |||||| ||||||||||||||    
T  33883485 atttatgcagggtgcataatgatttccttatgcaccataac 33883525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 46 - 78
Target Start/End: Original strand, 48077864 - 48077896
Alignment:
Q  46 tttatgcacggtgcataaggatttctttatgca 78  Q
    ||||||||||||||||||||||||| |||||||    
T  48077864 tttatgcacggtgcataaggatttccttatgca 48077896  T

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Target: chr4; HSP #78
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 93
Target Start/End: Complemental strand, 50562712 - 50562664
Alignment:
Q  45 atttatgcacggtgcataaggatttctttatgcaccataaccgctcccc 93  Q
    ||||||||||| |||||||||||||| |||||||  |||||||| ||||    
T  50562712 atttatgcacgatgcataaggatttccttatgcatgataaccgcacccc 50562664  T

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Target: chr8 (Bit Score: 66; Significance: 3e-29; HSPs: 49)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 15 - 92
Target Start/End: Complemental strand, 4835590 - 4835513
Alignment:
Q  15 tttgagggtgtaggaagcaattatgttggaatttatgcacggtgcataaggatttctttatgcaccataaccgctccc 92  Q
    |||| |||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||    
T  4835590 tttgggggtgtaggaagcaattatgttgggatttatgcacggtgcataaggatttccttatgcaccataaccgctccc 4835513  T

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Target: chr8; HSP #2
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 21 - 92
Target Start/End: Complemental strand, 1149981 - 1149910
Alignment:
Q  21 ggtgtaggaagcaattatgttggaatttatgcacggtgcataaggatttctttatgcaccataaccgctccc 92  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||    
T  1149981 ggtgtaggaagcaattatgttggaatttatgcacggtgcataaggatttccttatgcaccataaccactccc 1149910  T

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Target: chr8; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 20 - 94
Target Start/End: Complemental strand, 39657775 - 39657701
Alignment:
Q  20 gggtgtaggaagcaattatgttggaatttatgcacggtgcataaggatttctttatgcaccataaccgctcccct 94  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||| ||||||    
T  39657775 gggtgtaggaagcaattatgttgggatttatgcacggtgcataaggatttccttatgcaccataaccgatcccct 39657701  T

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Target: chr8; HSP #4
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 15 - 92
Target Start/End: Complemental strand, 34633285 - 34633208
Alignment:
Q  15 tttgagggtgtaggaagcaattatgttggaatttatgcacggtgcataaggatttctttatgcaccataaccgctccc 92  Q
    |||||||||||| |||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||| |||||    
T  34633285 tttgagggtgtaagaagcaattatgttgggatttatgcacggtgcataaggatttccttatgcaccataaccactccc 34633208  T

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Target: chr8; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 13 - 92
Target Start/End: Original strand, 2751205 - 2751284
Alignment:
Q  13 cgtttgagggtgtaggaagcaattatgttggaatttatgcacggtgcataaggatttctttatgcaccataaccgctccc 92  Q
    |||||| |||||||||||||||||||||||| ||| |||||||||||||||||||||  |||||||||||||||||||||    
T  2751205 cgtttgggggtgtaggaagcaattatgttgggattcatgcacggtgcataaggattttcttatgcaccataaccgctccc 2751284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 15 - 84
Target Start/End: Original strand, 1209758 - 1209827
Alignment:
Q  15 tttgagggtgtaggaagcaattatgttggaatttatgcacggtgcataaggatttctttatgcaccataa 84  Q
    |||| |||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||    
T  1209758 tttgggggtgtaggaagcaattatgttgggatttatgcacggtgcataaggatttccttatgcaccataa 1209827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 23 - 94
Target Start/End: Original strand, 30414024 - 30414095
Alignment:
Q  23 tgtaggaagcaattatgttggaatttatgcacggtgcataaggatttctttatgcaccataaccgctcccct 94  Q
    ||||||||||||||||||||| ||||||||||||||||||| |||||| ||||||||||||||| |||||||    
T  30414024 tgtaggaagcaattatgttgggatttatgcacggtgcataaagatttccttatgcaccataaccactcccct 30414095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 22 - 92
Target Start/End: Original strand, 7059144 - 7059214
Alignment:
Q  22 gtgtaggaagcaattatgttggaatttatgcacggtgcataaggatttctttatgcaccataaccgctccc 92  Q
    ||||||||| |||||||||||||||||||||||||||||||| |||||| |||||||||||||||| ||||    
T  7059144 gtgtaggaaacaattatgttggaatttatgcacggtgcataatgatttccttatgcaccataaccgatccc 7059214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 15 - 92
Target Start/End: Original strand, 10237456 - 10237533
Alignment:
Q  15 tttgagggtgtaggaagcaattatgttggaatttatgcacggtgcataaggatttctttatgcaccataaccgctccc 92  Q
    |||| |||||||| ||||||||||||||| |||||| ||||||||||||||||||| ||||||||||||||| |||||    
T  10237456 tttgggggtgtagaaagcaattatgttgggatttatacacggtgcataaggatttccttatgcaccataaccactccc 10237533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 23 - 92
Target Start/End: Original strand, 15227140 - 15227209
Alignment:
Q  23 tgtaggaagcaattatgttggaatttatgcacggtgcataaggatttctttatgcaccataaccgctccc 92  Q
    ||||||||||||||||||||| ||||||| |||||||||||||||||| ||||||||||||||| |||||    
T  15227140 tgtaggaagcaattatgttgggatttatgtacggtgcataaggatttccttatgcaccataaccactccc 15227209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 15 - 92
Target Start/End: Original strand, 19784373 - 19784450
Alignment:
Q  15 tttgagggtgtaggaagcaattatgttggaatttatgcacggtgcataaggatttctttatgcaccataaccgctccc 92  Q
    ||||||||||||||||||||||||||||| ||||||||||  |||||||||||||| ||||||| ||||||| |||||    
T  19784373 tttgagggtgtaggaagcaattatgttgggatttatgcacaatgcataaggatttccttatgcatcataaccactccc 19784450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 21 - 92
Target Start/End: Original strand, 41451213 - 41451284
Alignment:
Q  21 ggtgtaggaagcaattatgttggaatttatgcacggtgcataaggatttctttatgcaccataaccgctccc 92  Q
    ||||||||||||||||||||||| |||||||||| ||||||||||||||| |||| |||||||||| |||||    
T  41451213 ggtgtaggaagcaattatgttgggatttatgcacagtgcataaggatttccttatacaccataaccactccc 41451284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 15 - 92
Target Start/End: Original strand, 41099284 - 41099364
Alignment:
Q  15 tttgagggtgtaggaagcaattatgttggaatttatgcacggtgcataag---gatttctttatgcaccataaccgctccc 92  Q
    |||| |||||||||||||||||||||||| ||||||||||||||||||||   |||||| ||||||||||||||| |||||    
T  41099284 tttgggggtgtaggaagcaattatgttgggatttatgcacggtgcataaggatgatttccttatgcaccataaccactccc 41099364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 15 - 76
Target Start/End: Complemental strand, 4841035 - 4840974
Alignment:
Q  15 tttgagggtgtaggaagcaattatgttggaatttatgcacggtgcataaggatttctttatg 76  Q
    |||| |||||||||||||||||||||||| |||||||||||||||||||||||||| |||||    
T  4841035 tttgggggtgtaggaagcaattatgttgggatttatgcacggtgcataaggatttccttatg 4840974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 39 - 93
Target Start/End: Complemental strand, 15259903 - 15259849
Alignment:
Q  39 gttggaatttatgcacggtgcataaggatttctttatgcaccataaccgctcccc 93  Q
    ||||| |||||||||||||||||||||||||| |||||| |||||||||||||||    
T  15259903 gttgggatttatgcacggtgcataaggatttccttatgccccataaccgctcccc 15259849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 45 - 93
Target Start/End: Complemental strand, 35301671 - 35301623
Alignment:
Q  45 atttatgcacggtgcataaggatttctttatgcaccataaccgctcccc 93  Q
    |||||||||||||||||||||||||| ||||||||||||||| ||||||    
T  35301671 atttatgcacggtgcataaggatttccttatgcaccataaccactcccc 35301623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 45 - 88
Target Start/End: Original strand, 18757330 - 18757373
Alignment:
Q  45 atttatgcacggtgcataaggatttctttatgcaccataaccgc 88  Q
    ||||||||| ||||||||||||||||||||||||||||||||||    
T  18757330 atttatgcagggtgcataaggatttctttatgcaccataaccgc 18757373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 46 - 85
Target Start/End: Complemental strand, 1208755 - 1208716
Alignment:
Q  46 tttatgcacggtgcataaggatttctttatgcaccataac 85  Q
    ||||||||||||||||||||||||| ||||||||||||||    
T  1208755 tttatgcacggtgcataaggatttccttatgcaccataac 1208716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 186 - 232
Target Start/End: Complemental strand, 1838474 - 1838430
Alignment:
Q  186 taatctatagataatataataaagcaaacttagtattttggcaagtt 232  Q
    ||||||||||||||||  |||||||||||||||||||||||||||||    
T  1838474 taatctatagataata--ataaagcaaacttagtattttggcaagtt 1838430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 46 - 85
Target Start/End: Original strand, 4836720 - 4836759
Alignment:
Q  46 tttatgcacggtgcataaggatttctttatgcaccataac 85  Q
    ||||||||||||||||||| ||||||||||||||||||||    
T  4836720 tttatgcacggtgcataagcatttctttatgcaccataac 4836759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 46 - 85
Target Start/End: Original strand, 4842165 - 4842204
Alignment:
Q  46 tttatgcacggtgcataaggatttctttatgcaccataac 85  Q
    ||||||||||||||||||| ||||||||||||||||||||    
T  4842165 tttatgcacggtgcataagcatttctttatgcaccataac 4842204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 45 - 92
Target Start/End: Original strand, 9853258 - 9853305
Alignment:
Q  45 atttatgcacggtgcataaggatttctttatgcaccataaccgctccc 92  Q
    |||||||||| |||||||||||||| |||||||||||||||| |||||    
T  9853258 atttatgcacagtgcataaggatttttttatgcaccataaccactccc 9853305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 45 - 88
Target Start/End: Original strand, 17792894 - 17792937
Alignment:
Q  45 atttatgcacggtgcataaggatttctttatgcaccataaccgc 88  Q
    ||||||||| |||||||||||||||| |||||||||||||||||    
T  17792894 atttatgcagggtgcataaggatttccttatgcaccataaccgc 17792937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 46 - 85
Target Start/End: Original strand, 32987464 - 32987503
Alignment:
Q  46 tttatgcacggtgcataaggatttctttatgcaccataac 85  Q
    ||||||||||||||||||||||||| ||||||||||||||    
T  32987464 tttatgcacggtgcataaggatttccttatgcaccataac 32987503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 45 - 96
Target Start/End: Complemental strand, 34647213 - 34647162
Alignment:
Q  45 atttatgcacggtgcataaggatttctttatgcaccataaccgctcccctct 96  Q
    |||||| ||||||||||||||||||| ||||||||||||||| || ||||||    
T  34647213 atttatacacggtgcataaggatttccttatgcaccataaccacttccctct 34647162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 45 - 88
Target Start/End: Original strand, 35448612 - 35448655
Alignment:
Q  45 atttatgcacggtgcataaggatttctttatgcaccataaccgc 88  Q
    ||||||||| |||||||||||||||| |||||||||||||||||    
T  35448612 atttatgcagggtgcataaggatttccttatgcaccataaccgc 35448655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 46 - 85
Target Start/End: Complemental strand, 39022021 - 39021982
Alignment:
Q  46 tttatgcacggtgcataaggatttctttatgcaccataac 85  Q
    ||||||||||||||||||||||||| ||||||||||||||    
T  39022021 tttatgcacggtgcataaggatttccttatgcaccataac 39021982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 47 - 85
Target Start/End: Complemental strand, 42433746 - 42433708
Alignment:
Q  47 ttatgcacggtgcataaggatttctttatgcaccataac 85  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  42433746 ttatgcacggtgcataaggatttccttatgcaccataac 42433708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 43 - 88
Target Start/End: Original strand, 10586061 - 10586106
Alignment:
Q  43 gaatttatgcacggtgcataaggatttctttatgcaccataaccgc 88  Q
    ||||||||||| |||||||||||||||| ||||||| |||||||||    
T  10586061 gaatttatgcagggtgcataaggatttccttatgcatcataaccgc 10586106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 43 - 88
Target Start/End: Original strand, 15809840 - 15809885
Alignment:
Q  43 gaatttatgcacggtgcataaggatttctttatgcaccataaccgc 88  Q
    ||||||||| | |||||||||||||||| |||||||||||||||||    
T  15809840 gaatttatggagggtgcataaggatttccttatgcaccataaccgc 15809885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 45 - 86
Target Start/End: Original strand, 23397445 - 23397486
Alignment:
Q  45 atttatgcacggtgcataaggatttctttatgcaccataacc 86  Q
    ||||||||| |||||||||||||||| |||||||||||||||    
T  23397445 atttatgcatggtgcataaggatttccttatgcaccataacc 23397486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 41 - 86
Target Start/End: Complemental strand, 40022434 - 40022389
Alignment:
Q  41 tggaatttatgcacggtgcataaggatttctttatgcaccataacc 86  Q
    |||||||||| ||| ||||||||||||||| |||||||||||||||    
T  40022434 tggaatttatacacagtgcataaggatttccttatgcaccataacc 40022389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 45 - 85
Target Start/End: Original strand, 1672933 - 1672973
Alignment:
Q  45 atttatgcacggtgcataaggatttctttatgcaccataac 85  Q
    ||||||||| |||||||||||||||| ||||||||||||||    
T  1672933 atttatgcagggtgcataaggatttccttatgcaccataac 1672973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 45 - 93
Target Start/End: Complemental strand, 15808927 - 15808879
Alignment:
Q  45 atttatgcacggtgcataaggatttctttatgcaccataaccgctcccc 93  Q
    ||||||||| |||||||||||||||  ||||||||||||||||| ||||    
T  15808927 atttatgcagggtgcataaggattttcttatgcaccataaccgcacccc 15808879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 43 - 87
Target Start/End: Original strand, 24473244 - 24473288
Alignment:
Q  43 gaatttatgcacggtgcataaggatttctttatgcaccataaccg 87  Q
    |||||||| || |||||||||||||||| ||||||||||||||||    
T  24473244 gaatttatacagggtgcataaggatttccttatgcaccataaccg 24473288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 45 - 85
Target Start/End: Complemental strand, 27506748 - 27506708
Alignment:
Q  45 atttatgcacggtgcataaggatttctttatgcaccataac 85  Q
    ||||||||| |||||||||||||||| ||||||||||||||    
T  27506748 atttatgcagggtgcataaggatttccttatgcaccataac 27506708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 43 - 86
Target Start/End: Complemental strand, 185925 - 185882
Alignment:
Q  43 gaatttatgcacggtgcataaggatttctttatgcaccataacc 86  Q
    |||||||||||  ||||||||||||||| |||||||||||||||    
T  185925 gaatttatgcagagtgcataaggatttccttatgcaccataacc 185882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 46 - 85
Target Start/End: Complemental strand, 7058160 - 7058121
Alignment:
Q  46 tttatgcacggtgcataaggatttctttatgcaccataac 85  Q
    ||||||||||||||||||| ||||| ||||||||||||||    
T  7058160 tttatgcacggtgcataagtatttccttatgcaccataac 7058121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 15 - 54
Target Start/End: Original strand, 7857782 - 7857821
Alignment:
Q  15 tttgagggtgtaggaagcaattatgttggaatttatgcac 54  Q
    |||| |||||||||||||||||||||||| ||||||||||    
T  7857782 tttgggggtgtaggaagcaattatgttgggatttatgcac 7857821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 45 - 88
Target Start/End: Complemental strand, 17656660 - 17656617
Alignment:
Q  45 atttatgcacggtgcataaggatttctttatgcaccataaccgc 88  Q
    |||||||||  ||||||||||||||| |||||||||||||||||    
T  17656660 atttatgcagagtgcataaggatttccttatgcaccataaccgc 17656617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 45 - 84
Target Start/End: Complemental strand, 21120234 - 21120195
Alignment:
Q  45 atttatgcacggtgcataaggatttctttatgcaccataa 84  Q
    ||||||||| |||||||||||||||| |||||||||||||    
T  21120234 atttatgcatggtgcataaggatttcattatgcaccataa 21120195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 45 - 88
Target Start/End: Complemental strand, 23567528 - 23567485
Alignment:
Q  45 atttatgcacggtgcataaggatttctttatgcaccataaccgc 88  Q
    |||||||||  ||||||||||||||| |||||||||||||||||    
T  23567528 atttatgcagagtgcataaggatttccttatgcaccataaccgc 23567485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 45 - 92
Target Start/End: Original strand, 39023001 - 39023048
Alignment:
Q  45 atttatgcacggtgcataaggatttctttatgcaccataaccgctccc 92  Q
    |||||| ||||||| ||||| ||||| |||||||||||||||||||||    
T  39023001 atttatacacggtgtataagaatttccttatgcaccataaccgctccc 39023048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 47 - 94
Target Start/End: Original strand, 42434566 - 42434613
Alignment:
Q  47 ttatgcacggtgcataaggatttctttatgcaccataaccgctcccct 94  Q
    ||||||||||||||||||||  || ||||||||||||||| |||||||    
T  42434566 ttatgcacggtgcataaggaaatccttatgcaccataaccactcccct 42434613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 87
Target Start/End: Original strand, 23567645 - 23567687
Alignment:
Q  45 atttatgcacggtgcataaggatttctttatgcaccataaccg 87  Q
    ||||||||| |||||||||| ||||| ||||||||||||||||    
T  23567645 atttatgcagggtgcataagaatttccttatgcaccataaccg 23567687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 15 - 57
Target Start/End: Original strand, 43690742 - 43690784
Alignment:
Q  15 tttgagggtgtaggaagcaattatgttggaatttatgcacggt 57  Q
    |||| |||||||| ||||||||||||||| |||||||||||||    
T  43690742 tttgggggtgtagaaagcaattatgttgggatttatgcacggt 43690784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 43 - 88
Target Start/End: Complemental strand, 5222964 - 5222919
Alignment:
Q  43 gaatttatgcacggtgcataaggatttctttatgcaccataaccgc 88  Q
    ||||||||||| | |||| |||||||| ||||||||||||||||||    
T  5222964 gaatttatgcaagctgcaaaaggatttttttatgcaccataaccgc 5222919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 43 - 88
Target Start/End: Complemental strand, 34343293 - 34343248
Alignment:
Q  43 gaatttatgcacggtgcataaggatttctttatgcaccataaccgc 88  Q
    ||||||||| | ||||||||| |||||| |||||||||||||||||    
T  34343293 gaatttatgtagggtgcataaagatttccttatgcaccataaccgc 34343248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 43 - 88
Target Start/End: Original strand, 34343451 - 34343496
Alignment:
Q  43 gaatttatgcacggtgcataaggatttctttatgcaccataaccgc 88  Q
    ||||||||||| |||||||||  ||||| |||||||||||||||||    
T  34343451 gaatttatgcagggtgcataataatttccttatgcaccataaccgc 34343496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 66; Significance: 3e-29; HSPs: 46)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 15 - 92
Target Start/End: Complemental strand, 41911076 - 41910999
Alignment:
Q  15 tttgagggtgtaggaagcaattatgttggaatttatgcacggtgcataaggatttctttatgcaccataaccgctccc 92  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||| |||||    
T  41911076 tttgagggtgtaggaagcaattatgttgggatttatgcacggtgcataaggatttccttatgcaccataaccactccc 41910999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 15 - 94
Target Start/End: Original strand, 47340249 - 47340328
Alignment:
Q  15 tttgagggtgtaggaagcaattatgttggaatttatgcacggtgcataaggatttctttatgcaccataaccgctcccct 94  Q
    |||| |||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||| |||||||    
T  47340249 tttgggggtgtaggaagcaattatgttgggatttatgcacggtgcataaggatttccttatgcaccataaccactcccct 47340328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 15 - 92
Target Start/End: Complemental strand, 32685916 - 32685839
Alignment:
Q  15 tttgagggtgtaggaagcaattatgttggaatttatgcacggtgcataaggatttctttatgcaccataaccgctccc 92  Q
    ||||||||||||||||||||||||||||  |||||||||||||| ||||||||||| |||||||||||||||||||||    
T  32685916 tttgagggtgtaggaagcaattatgttgagatttatgcacggtgtataaggatttccttatgcaccataaccgctccc 32685839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 15 - 92
Target Start/End: Original strand, 46358622 - 46358699
Alignment:
Q  15 tttgagggtgtaggaagcaattatgttggaatttatgcacggtgcataaggatttctttatgcaccataaccgctccc 92  Q
    |||| |||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||| |||||    
T  46358622 tttgggggtgtaggaagcaattatgttgggatttatgcacggtgcataaggatttccttatgcaccataaccactccc 46358699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 15 - 92
Target Start/End: Complemental strand, 46572646 - 46572569
Alignment:
Q  15 tttgagggtgtaggaagcaattatgttggaatttatgcacggtgcataaggatttctttatgcaccataaccgctccc 92  Q
    |||| |||||||||||||||||||||||| ||||||||| |||||||||||||||| |||||||||||||||||||||    
T  46572646 tttgggggtgtaggaagcaattatgttgggatttatgcatggtgcataaggatttccttatgcaccataaccgctccc 46572569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 21 - 92
Target Start/End: Original strand, 48692028 - 48692099
Alignment:
Q  21 ggtgtaggaagcaattatgttggaatttatgcacggtgcataaggatttctttatgcaccataaccgctccc 92  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||| ||||    
T  48692028 ggtgtaggaagcaattatgttgggatttatgcacggtgcataaggatttccttatgcaccataaccgatccc 48692099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 15 - 93
Target Start/End: Original strand, 31660171 - 31660249
Alignment:
Q  15 tttgagggtgtaggaagcaattatgttggaatttatgcacggtgcataaggatttctttatgcaccataaccgctcccc 93  Q
    |||| |||||||||||||||||||||||  |||||||||||||||||||||||||| ||||||||||||||| ||||||    
T  31660171 tttgggggtgtaggaagcaattatgttgagatttatgcacggtgcataaggatttccttatgcaccataaccactcccc 31660249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 15 - 92
Target Start/End: Original strand, 763799 - 763876
Alignment:
Q  15 tttgagggtgtaggaagcaattatgttggaatttatgcacggtgcataaggatttctttatgcaccataaccgctccc 92  Q
    |||| |||||||||||||||||||||||| |||||||||| ||||||||||||||| ||||||||||||||| |||||    
T  763799 tttgggggtgtaggaagcaattatgttgggatttatgcacagtgcataaggatttccttatgcaccataaccactccc 763876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 15 - 92
Target Start/End: Complemental strand, 30884186 - 30884109
Alignment:
Q  15 tttgagggtgtaggaagcaattatgttggaatttatgcacggtgcataaggatttctttatgcaccataaccgctccc 92  Q
    |||| |||||||||||||||||||||| | |||||||||||||||||||||||||| ||||||||||||||| |||||    
T  30884186 tttgggggtgtaggaagcaattatgttaggatttatgcacggtgcataaggatttccttatgcaccataaccactccc 30884109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 23 - 92
Target Start/End: Original strand, 35737058 - 35737127
Alignment:
Q  23 tgtaggaagcaattatgttggaatttatgcacggtgcataaggatttctttatgcaccataaccgctccc 92  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||| |||||    
T  35737058 tgtaggaagcaattatgttgggatttatgcacggtgcataaggatttccttatgcaccataaccactccc 35737127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 20 - 91
Target Start/End: Complemental strand, 15973927 - 15973856
Alignment:
Q  20 gggtgtaggaagcaattatgttggaatttatgcacggtgcataaggatttctttatgcaccataaccgctcc 91  Q
    ||||||||||||||| |||||||| ||||||||| |||||||||||||||| ||||||||||||||||||||    
T  15973927 gggtgtaggaagcaactatgttgggatttatgcatggtgcataaggatttccttatgcaccataaccgctcc 15973856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 20 - 86
Target Start/End: Complemental strand, 16933202 - 16933136
Alignment:
Q  20 gggtgtaggaagcaattatgttggaatttatgcacggtgcataaggatttctttatgcaccataacc 86  Q
    |||||||||||||||||||||||  |||||||||||||||||||||||||| |||||||||||||||    
T  16933202 gggtgtaggaagcaattatgttgagatttatgcacggtgcataaggatttccttatgcaccataacc 16933136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 20 - 86
Target Start/End: Complemental strand, 16938585 - 16938519
Alignment:
Q  20 gggtgtaggaagcaattatgttggaatttatgcacggtgcataaggatttctttatgcaccataacc 86  Q
    |||||||||||||||||||||||  |||||||||||||||||||||||||| |||||||||||||||    
T  16938585 gggtgtaggaagcaattatgttgagatttatgcacggtgcataaggatttccttatgcaccataacc 16938519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 45 - 92
Target Start/End: Complemental strand, 11732084 - 11732037
Alignment:
Q  45 atttatgcacggtgcataaggatttctttatgcaccataaccgctccc 92  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||    
T  11732084 atttatgcacggtgcataaggatttccttatgcaccataaccgctccc 11732037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 41 - 92
Target Start/End: Original strand, 48830597 - 48830648
Alignment:
Q  41 tggaatttatgcacggtgcataaggatttctttatgcaccataaccgctccc 92  Q
    |||||||||||||||||||||||||||||| ||||||||||||||| |||||    
T  48830597 tggaatttatgcacggtgcataaggatttccttatgcaccataaccactccc 48830648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 38 - 93
Target Start/End: Complemental strand, 34228654 - 34228599
Alignment:
Q  38 tgttggaatttatgcacggtgcataaggatttctttatgcaccataaccgctcccc 93  Q
    |||||| |||||||||||||||||||||||||  ||||||||||||||| ||||||    
T  34228654 tgttgggatttatgcacggtgcataaggattttcttatgcaccataaccactcccc 34228599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 46 - 85
Target Start/End: Complemental strand, 48690941 - 48690902
Alignment:
Q  46 tttatgcacggtgcataaggatttctttatgcaccataac 85  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  48690941 tttatgcacggtgcataaggatttctttatgcaccataac 48690902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 43 - 88
Target Start/End: Original strand, 46004535 - 46004580
Alignment:
Q  43 gaatttatgcacggtgcataaggatttctttatgcaccataaccgc 88  Q
    ||||||||||| |||||||||||||||| |||||||||||||||||    
T  46004535 gaatttatgcagggtgcataaggatttccttatgcaccataaccgc 46004580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 43 - 94
Target Start/End: Original strand, 7843719 - 7843770
Alignment:
Q  43 gaatttatgcacggtgcataaggatttctttatgcaccataaccgctcccct 94  Q
    ||||||||||| | ||||||||||||||||||| |||||||||||| |||||    
T  7843719 gaatttatgcaggttgcataaggatttctttatacaccataaccgcacccct 7843770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 46 - 85
Target Start/End: Original strand, 15974955 - 15974994
Alignment:
Q  46 tttatgcacggtgcataaggatttctttatgcaccataac 85  Q
    ||||||||||||||||||||||||| ||||||||||||||    
T  15974955 tttatgcacggtgcataaggatttccttatgcaccataac 15974994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 45 - 88
Target Start/End: Original strand, 26945716 - 26945759
Alignment:
Q  45 atttatgcacggtgcataaggatttctttatgcaccataaccgc 88  Q
    ||||||||| |||||||||||||||| |||||||||||||||||    
T  26945716 atttatgcagggtgcataaggatttccttatgcaccataaccgc 26945759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 46 - 85
Target Start/End: Complemental strand, 30428919 - 30428880
Alignment:
Q  46 tttatgcacggtgcataaggatttctttatgcaccataac 85  Q
    ||||||||||||||||||||||||| ||||||||||||||    
T  30428919 tttatgcacggtgcataaggatttccttatgcaccataac 30428880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 45 - 88
Target Start/End: Original strand, 38837731 - 38837774
Alignment:
Q  45 atttatgcacggtgcataaggatttctttatgcaccataaccgc 88  Q
    ||||||||| |||||||||||||||| |||||||||||||||||    
T  38837731 atttatgcaaggtgcataaggatttccttatgcaccataaccgc 38837774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 45 - 88
Target Start/End: Complemental strand, 44426640 - 44426597
Alignment:
Q  45 atttatgcacggtgcataaggatttctttatgcaccataaccgc 88  Q
    ||||||||| |||||||||||||||| |||||||||||||||||    
T  44426640 atttatgcagggtgcataaggatttccttatgcaccataaccgc 44426597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 15 - 92
Target Start/End: Original strand, 48306325 - 48306398
Alignment:
Q  15 tttgagggtgtaggaagcaattatgttggaatttatgcacggtgcataaggatttctttatgcaccataaccgctccc 92  Q
    ||||| ||||||||||| ||||||||||| |||||||||||||||||||| |   | |||||||||||||||| ||||    
T  48306325 tttgaaggtgtaggaag-aattatgttgggatttatgcacggtgcataagaa---ccttatgcaccataaccgatccc 48306398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 44 - 94
Target Start/End: Original strand, 7845098 - 7845148
Alignment:
Q  44 aatttatgcacggtgcataaggatttctttatgcaccataaccgctcccct 94  Q
    |||||||||| | |||||||||||||| ||||||||||||||||| |||||    
T  7845098 aatttatgcaggttgcataaggatttccttatgcaccataaccgcacccct 7845148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 45 - 91
Target Start/End: Original strand, 46025062 - 46025108
Alignment:
Q  45 atttatgcacggtgcataaggatttctttatgcaccataaccgctcc 91  Q
    |||||||||||||||||| ||||||| ||||||||||||||| ||||    
T  46025062 atttatgcacggtgcatagggatttccttatgcaccataaccactcc 46025108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 45 - 94
Target Start/End: Original strand, 24360757 - 24360806
Alignment:
Q  45 atttatgcacggtgcataaggatttctttatgcaccataaccgctcccct 94  Q
    |||||||||||||||||||  ||||| ||||||||||||||| |||||||    
T  24360757 atttatgcacggtgcataaatatttccttatgcaccataaccactcccct 24360806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 43 - 88
Target Start/End: Original strand, 34227876 - 34227921
Alignment:
Q  43 gaatttatgcacggtgcataaggatttctttatgcaccataaccgc 88  Q
    ||||||||||| |||||||||| ||||| |||||||||||||||||    
T  34227876 gaatttatgcagggtgcataagaatttccttatgcaccataaccgc 34227921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 45 - 93
Target Start/End: Complemental strand, 31365313 - 31365265
Alignment:
Q  45 atttatgcacggtgcataaggatttctttatgcaccataaccgctcccc 93  Q
    ||||||||| | |||||||||||||| ||||||||||||||||| ||||    
T  31365313 atttatgcaagatgcataaggatttccttatgcaccataaccgcacccc 31365265  T

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Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 44 - 88
Target Start/End: Original strand, 41065970 - 41066014
Alignment:
Q  44 aatttatgcacggtgcataaggatttctttatgcaccataaccgc 88  Q
    |||||||||| ||| |||||||||||| |||||||||||||||||    
T  41065970 aatttatgcagggtacataaggatttccttatgcaccataaccgc 41066014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 45 - 93
Target Start/End: Complemental strand, 43742291 - 43742243
Alignment:
Q  45 atttatgcacggtgcataaggatttctttatgcaccataaccgctcccc 93  Q
    ||||||||| | |||||||||||||| ||||||||||||||||| ||||    
T  43742291 atttatgcaggatgcataaggatttccttatgcaccataaccgcacccc 43742243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 45 - 93
Target Start/End: Original strand, 44426801 - 44426849
Alignment:
Q  45 atttatgcacggtgcataaggatttctttatgcaccataaccgctcccc 93  Q
    ||||||||| ||||||||| |||||| ||||||||||||||||| ||||    
T  44426801 atttatgcagggtgcataaagatttccttatgcaccataaccgcgcccc 44426849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 45 - 88
Target Start/End: Complemental strand, 6620661 - 6620618
Alignment:
Q  45 atttatgcacggtgcataaggatttctttatgcaccataaccgc 88  Q
    |||||||||  ||||||||||||||| |||||||||||||||||    
T  6620661 atttatgcatagtgcataaggatttcgttatgcaccataaccgc 6620618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 46 - 85
Target Start/End: Complemental strand, 12279791 - 12279752
Alignment:
Q  46 tttatgcacggtgcataaggatttctttatgcaccataac 85  Q
    |||||||||||||||||| |||||| ||||||||||||||    
T  12279791 tttatgcacggtgcataaagatttccttatgcaccataac 12279752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 53 - 92
Target Start/End: Original strand, 33798743 - 33798782
Alignment:
Q  53 acggtgcataaggatttctttatgcaccataaccgctccc 92  Q
    |||||||||||||||||| ||||||||||||||| |||||    
T  33798743 acggtgcataaggatttccttatgcaccataaccactccc 33798782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 45 - 88
Target Start/End: Complemental strand, 34227718 - 34227675
Alignment:
Q  45 atttatgcacggtgcataaggatttctttatgcaccataaccgc 88  Q
    ||||||||| | |||||||||||||| |||||||||||||||||    
T  34227718 atttatgcaggttgcataaggatttccttatgcaccataaccgc 34227675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 95
Target Start/End: Original strand, 45478516 - 45478566
Alignment:
Q  45 atttatgcacggtgcataaggatttctttatgcaccataaccgctcccctc 95  Q
    ||||||||| | |||||||||||||  ||||||||||||||||| ||||||    
T  45478516 atttatgcaagatgcataaggattttcttatgcaccataaccgcgcccctc 45478566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 43 - 88
Target Start/End: Complemental strand, 924541 - 924496
Alignment:
Q  43 gaatttatgcacggtgcataaggatttctttatgcaccataaccgc 88  Q
    ||||||||||| |||| |||| |||||| |||||||||||||||||    
T  924541 gaatttatgcaaggtgtataaagatttccttatgcaccataaccgc 924496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 47 - 92
Target Start/End: Original strand, 12286723 - 12286768
Alignment:
Q  47 ttatgcacggtgcataaggatttctttatgcaccataaccgctccc 92  Q
    |||||||| |||||||| |||||| ||||||||||||||| |||||    
T  12286723 ttatgcactgtgcataaagatttccttatgcaccataaccactccc 12286768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 43 - 84
Target Start/End: Complemental strand, 38837584 - 38837543
Alignment:
Q  43 gaatttatgcacggtgcataaggatttctttatgcaccataa 84  Q
    ||||||||||| ||||||||||||||||  ||||||||||||    
T  38837584 gaatttatgcagggtgcataaggatttccgtatgcaccataa 38837543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 93
Target Start/End: Complemental strand, 5728667 - 5728619
Alignment:
Q  45 atttatgcacggtgcataaggatttctttatgcaccataaccgctcccc 93  Q
    ||||||||| |||||||||||||||| | |||||| |||||||| ||||    
T  5728667 atttatgcaaggtgcataaggatttcctcatgcactataaccgcacccc 5728619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 48 - 88
Target Start/End: Complemental strand, 26945553 - 26945513
Alignment:
Q  48 tatgcacggtgcataaggatttctttatgcaccataaccgc 88  Q
    |||||| |||||||||| ||||| |||||||||||||||||    
T  26945553 tatgcagggtgcataagaatttccttatgcaccataaccgc 26945513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 46 - 78
Target Start/End: Complemental strand, 28396768 - 28396736
Alignment:
Q  46 tttatgcacggtgcataaggatttctttatgca 78  Q
    ||||||||||||||||||||||||| |||||||    
T  28396768 tttatgcacggtgcataaggatttccttatgca 28396736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 85
Target Start/End: Complemental strand, 46004383 - 46004343
Alignment:
Q  45 atttatgcacggtgcataaggatttctttatgcaccataac 85  Q
    |||||||||  ||||||||||||||| ||||||||||||||    
T  46004383 atttatgcagagtgcataaggatttcgttatgcaccataac 46004343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 43
Target Start/End: Complemental strand, 46345936 - 46345908
Alignment:
Q  15 tttgagggtgtaggaagcaattatgttgg 43  Q
    |||||||||||||||||||||||||||||    
T  46345936 tttgagggtgtaggaagcaattatgttgg 46345908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 66; Significance: 3e-29; HSPs: 46)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 15 - 92
Target Start/End: Complemental strand, 1292143 - 1292066
Alignment:
Q  15 tttgagggtgtaggaagcaattatgttggaatttatgcacggtgcataaggatttctttatgcaccataaccgctccc 92  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||    
T  1292143 tttgggggtgtaggaagcaattatgttggaatttatgcacggtgcataaggatttccttatgcaccataaccactccc 1292066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 21 - 94
Target Start/End: Complemental strand, 7487212 - 7487139
Alignment:
Q  21 ggtgtaggaagcaattatgttggaatttatgcacggtgcataaggatttctttatgcaccataaccgctcccct 94  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||| |||||||    
T  7487212 ggtgtaggaagcaattatgttgggatttatgcacggtgcataaggatttccttatgcaccataaccactcccct 7487139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 15 - 92
Target Start/End: Complemental strand, 18297240 - 18297163
Alignment:
Q  15 tttgagggtgtaggaagcaattatgttggaatttatgcacggtgcataaggatttctttatgcaccataaccgctccc 92  Q
    |||| |||||||||||||||||||||||| ||||||||||||||||||||||||||  ||||||||||||||||||||    
T  18297240 tttgggggtgtaggaagcaattatgttgggatttatgcacggtgcataaggatttccctatgcaccataaccgctccc 18297163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 15 - 92
Target Start/End: Original strand, 39355137 - 39355214
Alignment:
Q  15 tttgagggtgtaggaagcaattatgttggaatttatgcacggtgcataaggatttctttatgcaccataaccgctccc 92  Q
    |||| |||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||| |||||    
T  39355137 tttgggggtgtaggaagcaattatgttgggatttatgcacggtgcataaggatttccttatgcaccataaccactccc 39355214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 15 - 92
Target Start/End: Original strand, 8149933 - 8150010
Alignment:
Q  15 tttgagggtgtaggaagcaattatgttggaatttatgcacggtgcataaggatttctttatgcaccataaccgctccc 92  Q
    |||| |||||||||||||||||||||||| ||||||||| |||||||||||||||| ||||||||||| ||| |||||    
T  8149933 tttgggggtgtaggaagcaattatgttgggatttatgcatggtgcataaggatttccttatgcaccattaccactccc 8150010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 15 - 92
Target Start/End: Original strand, 8154557 - 8154634
Alignment:
Q  15 tttgagggtgtaggaagcaattatgttggaatttatgcacggtgcataaggatttctttatgcaccataaccgctccc 92  Q
    |||| |||||||||||||||||||||||| ||||||||| |||||||||||||||| ||||||||||| ||| |||||    
T  8154557 tttgggggtgtaggaagcaattatgttgggatttatgcatggtgcataaggatttccttatgcaccattaccactccc 8154634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 15 - 92
Target Start/End: Complemental strand, 15016530 - 15016453
Alignment:
Q  15 tttgagggtgtaggaagcaattatgttggaatttatgcacggtgcataaggatttctttatgcaccataaccgctccc 92  Q
    |||| |||||||||||||||||||||||  |||||||||||||||||||| ||||| ||||||||||||||| |||||    
T  15016530 tttgggggtgtaggaagcaattatgttgagatttatgcacggtgcataagaatttccttatgcaccataaccactccc 15016453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 15 - 92
Target Start/End: Original strand, 25193963 - 25194040
Alignment:
Q  15 tttgagggtgtaggaagcaattatgttggaatttatgcacggtgcataaggatttctttatgcaccataaccgctccc 92  Q
    |||| ||||||||||| ||||||| |||| |||||||||||||||||||||||||| |||||||||||||||| ||||    
T  25193963 tttgggggtgtaggaaacaattatattgggatttatgcacggtgcataaggatttcattatgcaccataaccgatccc 25194040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 20 - 86
Target Start/End: Original strand, 34464818 - 34464884
Alignment:
Q  20 gggtgtaggaagcaattatgttggaatttatgcacggtgcataaggatttctttatgcaccataacc 86  Q
    |||||||||||||||||||||| | |||||||||||||||||||||||||| ||||| |||||||||    
T  34464818 gggtgtaggaagcaattatgtttggatttatgcacggtgcataaggatttccttatggaccataacc 34464884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 41 - 93
Target Start/End: Complemental strand, 41345133 - 41345081
Alignment:
Q  41 tggaatttatgcacggtgcataaggatttctttatgcaccataaccgctcccc 93  Q
    |||||||||||||||||||||||||||||| ||||||||||||||| ||||||    
T  41345133 tggaatttatgcacggtgcataaggatttccttatgcaccataaccactcccc 41345081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 43 - 88
Target Start/End: Original strand, 24183597 - 24183642
Alignment:
Q  43 gaatttatgcacggtgcataaggatttctttatgcaccataaccgc 88  Q
    ||||||||||| |||||||||||||||| |||||||||||||||||    
T  24183597 gaatttatgcagggtgcataaggatttccttatgcaccataaccgc 24183642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 15 - 62
Target Start/End: Original strand, 2264626 - 2264673
Alignment:
Q  15 tttgagggtgtaggaagcaattatgttggaatttatgcacggtgcata 62  Q
    |||| |||||||||||||||||||||||||||||||| || |||||||    
T  2264626 tttgggggtgtaggaagcaattatgttggaatttatgtactgtgcata 2264673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 15 - 54
Target Start/End: Original strand, 9143687 - 9143726
Alignment:
Q  15 tttgagggtgtaggaagcaattatgttggaatttatgcac 54  Q
    |||| |||||||||||||||||||||||||||||||||||    
T  9143687 tttgggggtgtaggaagcaattatgttggaatttatgcac 9143726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 46 - 85
Target Start/End: Original strand, 18298130 - 18298169
Alignment:
Q  46 tttatgcacggtgcataaggatttctttatgcaccataac 85  Q
    ||||||||||||||||||||||||| ||||||||||||||    
T  18298130 tttatgcacggtgcataaggatttccttatgcaccataac 18298169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 43 - 94
Target Start/End: Complemental strand, 19246706 - 19246655
Alignment:
Q  43 gaatttatgcacggtgcataaggatttctttatgcaccataaccgctcccct 94  Q
    ||||||||||| |||||||||||||||| |||||||||||||| || |||||    
T  19246706 gaatttatgcagggtgcataaggatttccttatgcaccataactgcacccct 19246655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 45 - 88
Target Start/End: Complemental strand, 20661438 - 20661395
Alignment:
Q  45 atttatgcacggtgcataaggatttctttatgcaccataaccgc 88  Q
    ||||||||| |||||||||||||||| |||||||||||||||||    
T  20661438 atttatgcagggtgcataaggatttccttatgcaccataaccgc 20661395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 46 - 85
Target Start/End: Complemental strand, 25192938 - 25192899
Alignment:
Q  46 tttatgcacggtgcataaggatttctttatgcaccataac 85  Q
    ||||||||||||||||||||||||| ||||||||||||||    
T  25192938 tttatgcacggtgcataaggatttccttatgcaccataac 25192899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 45 - 88
Target Start/End: Complemental strand, 30777337 - 30777294
Alignment:
Q  45 atttatgcacggtgcataaggatttctttatgcaccataaccgc 88  Q
    ||||||||| ||||||||||||||| ||||||||||||||||||    
T  30777337 atttatgcagggtgcataaggatttttttatgcaccataaccgc 30777294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 45 - 88
Target Start/End: Complemental strand, 31783835 - 31783792
Alignment:
Q  45 atttatgcacggtgcataaggatttctttatgcaccataaccgc 88  Q
    ||||||||| |||||||||||||||| |||||||||||||||||    
T  31783835 atttatgcagggtgcataaggatttccttatgcaccataaccgc 31783792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 43 - 94
Target Start/End: Original strand, 37867355 - 37867406
Alignment:
Q  43 gaatttatgcacggtgcataaggatttctttatgcaccataaccgctcccct 94  Q
    ||||||||||| |||||||||||||||| ||||||||| ||||||| |||||    
T  37867355 gaatttatgcagggtgcataaggatttccttatgcaccgtaaccgcgcccct 37867406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 22 - 64
Target Start/End: Original strand, 18762946 - 18762988
Alignment:
Q  22 gtgtaggaagcaattatgttggaatttatgcacggtgcataag 64  Q
    |||||||||||||||||||||| ||||||| ||||||||||||    
T  18762946 gtgtaggaagcaattatgttgggatttatgtacggtgcataag 18762988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 15 - 56
Target Start/End: Complemental strand, 4578631 - 4578590
Alignment:
Q  15 tttgagggtgtaggaagcaattatgttggaatttatgcacgg 56  Q
    ||||| ||||||||||||||||||||||| ||||||||||||    
T  4578631 tttgaaggtgtaggaagcaattatgttgggatttatgcacgg 4578590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 43 - 88
Target Start/End: Complemental strand, 12449098 - 12449053
Alignment:
Q  43 gaatttatgcacggtgcataaggatttctttatgcaccataaccgc 88  Q
    |||||||||||  ||||||||||||||| |||||||||||||||||    
T  12449098 gaatttatgcagtgtgcataaggatttccttatgcaccataaccgc 12449053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 43 - 88
Target Start/End: Original strand, 15253020 - 15253065
Alignment:
Q  43 gaatttatgcacggtgcataaggatttctttatgcaccataaccgc 88  Q
    ||||||||||| |||||||||||||||| |||| ||||||||||||    
T  15253020 gaatttatgcagggtgcataaggatttcgttatacaccataaccgc 15253065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 43 - 88
Target Start/End: Complemental strand, 25575367 - 25575322
Alignment:
Q  43 gaatttatgcacggtgcataaggatttctttatgcaccataaccgc 88  Q
    ||||||||||| | |||||||||||||| |||||||||||||||||    
T  25575367 gaatttatgcaggatgcataaggatttccttatgcaccataaccgc 25575322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 45 - 86
Target Start/End: Complemental strand, 34726646 - 34726605
Alignment:
Q  45 atttatgcacggtgcataaggatttctttatgcaccataacc 86  Q
    ||||||||| |||||||||||||||| |||||||||||||||    
T  34726646 atttatgcagggtgcataaggatttccttatgcaccataacc 34726605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 45 - 78
Target Start/End: Complemental strand, 36635797 - 36635764
Alignment:
Q  45 atttatgcacggtgcataaggatttctttatgca 78  Q
    ||||||||||||||||||||||||||||||||||    
T  36635797 atttatgcacggtgcataaggatttctttatgca 36635764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 43 - 88
Target Start/End: Complemental strand, 37867198 - 37867153
Alignment:
Q  43 gaatttatgcacggtgcataaggatttctttatgcaccataaccgc 88  Q
    ||||||||||| |||| ||||||||||| |||||||||||||||||    
T  37867198 gaatttatgcagggtggataaggatttccttatgcaccataaccgc 37867153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 43 - 88
Target Start/End: Complemental strand, 42364536 - 42364491
Alignment:
Q  43 gaatttatgcacggtgcataaggatttctttatgcaccataaccgc 88  Q
    ||||||||||| |||||||||||||||  |||||||||||||||||    
T  42364536 gaatttatgcagggtgcataaggattttcttatgcaccataaccgc 42364491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 45 - 94
Target Start/End: Original strand, 44915493 - 44915542
Alignment:
Q  45 atttatgcacggtgcataaggatttctttatgcaccataaccgctcccct 94  Q
    ||||||||| |||||||||| ||||| ||||||||||||||||| |||||    
T  44915493 atttatgcagggtgcataagcatttccttatgcaccataaccgcacccct 44915542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 44 - 88
Target Start/End: Original strand, 12449244 - 12449288
Alignment:
Q  44 aatttatgcacggtgcataaggatttctttatgcaccataaccgc 88  Q
    |||||||||| ||||||||| |||||| |||||||||||||||||    
T  12449244 aatttatgcaaggtgcataaagatttccttatgcaccataaccgc 12449288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 45 - 88
Target Start/End: Original strand, 16111707 - 16111750
Alignment:
Q  45 atttatgcacggtgcataaggatttctttatgcaccataaccgc 88  Q
    ||||||||| ||||||||| |||||| |||||||||||||||||    
T  16111707 atttatgcagggtgcataaagatttccttatgcaccataaccgc 16111750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 46 - 85
Target Start/End: Complemental strand, 20709820 - 20709781
Alignment:
Q  46 tttatgcacggtgcataaggatttctttatgcaccataac 85  Q
    ||||||||||||| ||||||||||| ||||||||||||||    
T  20709820 tttatgcacggtggataaggatttccttatgcaccataac 20709781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 45 - 88
Target Start/End: Complemental strand, 22596346 - 22596303
Alignment:
Q  45 atttatgcacggtgcataaggatttctttatgcaccataaccgc 88  Q
    ||||||||| |||||||||||||||| |||| ||||||||||||    
T  22596346 atttatgcagggtgcataaggatttccttatacaccataaccgc 22596303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 45 - 88
Target Start/End: Original strand, 22596506 - 22596549
Alignment:
Q  45 atttatgcacggtgcataaggatttctttatgcaccataaccgc 88  Q
    ||||||||| ||| |||||||||||| |||||||||||||||||    
T  22596506 atttatgcagggtacataaggatttccttatgcaccataaccgc 22596549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 45 - 88
Target Start/End: Complemental strand, 31711552 - 31711509
Alignment:
Q  45 atttatgcacggtgcataaggatttctttatgcaccataaccgc 88  Q
    ||||||||| ||| |||||||||||| |||||||||||||||||    
T  31711552 atttatgcagggtacataaggatttccttatgcaccataaccgc 31711509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 45 - 88
Target Start/End: Original strand, 34726798 - 34726841
Alignment:
Q  45 atttatgcacggtgcataaggatttctttatgcaccataaccgc 88  Q
    ||||||||| |||||||||| ||||| |||||||||||||||||    
T  34726798 atttatgcagggtgcataagaatttccttatgcaccataaccgc 34726841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 45 - 88
Target Start/End: Original strand, 42364695 - 42364738
Alignment:
Q  45 atttatgcacggtgcataaggatttctttatgcaccataaccgc 88  Q
    ||||||||| |||||||||||||||| || ||||||||||||||    
T  42364695 atttatgcagggtgcataaggatttccttttgcaccataaccgc 42364738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 45 - 88
Target Start/End: Original strand, 43823877 - 43823920
Alignment:
Q  45 atttatgcacggtgcataaggatttctttatgcaccataaccgc 88  Q
    |||||||||||||||||||||||||| |||||||  ||||||||    
T  43823877 atttatgcacggtgcataaggatttccttatgcatgataaccgc 43823920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 87
Target Start/End: Original strand, 20661597 - 20661639
Alignment:
Q  45 atttatgcacggtgcataaggatttctttatgcaccataaccg 87  Q
    ||||||||| ||||||||| |||||| ||||||||||||||||    
T  20661597 atttatgcagggtgcataatgatttccttatgcaccataaccg 20661639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 43 - 88
Target Start/End: Original strand, 15150291 - 15150336
Alignment:
Q  43 gaatttatgcacggtgcataaggatttctttatgcaccataaccgc 88  Q
    ||||||||||| | |||||||||||||  |||||||||||||||||    
T  15150291 gaatttatgcaggatgcataaggattttcttatgcaccataaccgc 15150336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 43 - 88
Target Start/End: Complemental strand, 22588362 - 22588317
Alignment:
Q  43 gaatttatgcacggtgcataaggatttctttatgcaccataaccgc 88  Q
    ||||||||||| ||||||||||||  || |||||||||||||||||    
T  22588362 gaatttatgcagggtgcataaggaaatccttatgcaccataaccgc 22588317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 39 - 88
Target Start/End: Original strand, 25996085 - 25996134
Alignment:
Q  39 gttggaatttatgcacggtgcataaggatttctttatgcaccataaccgc 88  Q
    ||||||||||||||||||||| |||| ||||| |||||||  ||||||||    
T  25996085 gttggaatttatgcacggtgcttaagaatttccttatgcatgataaccgc 25996134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 55 - 88
Target Start/End: Original strand, 31783997 - 31784030
Alignment:
Q  55 ggtgcataaggatttctttatgcaccataaccgc 88  Q
    |||||||||||||||| |||||||||||||||||    
T  31783997 ggtgcataaggatttccttatgcaccataaccgc 31784030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 87
Target Start/End: Original strand, 31711699 - 31711742
Alignment:
Q  43 gaatttatgcacggtgcataaggatttctttatgcaccataaccg 87  Q
    ||||||||||| ||||||| |||||||| ||||||||||||||||    
T  31711699 gaatttatgcagggtgcatgaggatttc-ttatgcaccataaccg 31711742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 44 - 88
Target Start/End: Complemental strand, 44915334 - 44915290
Alignment:
Q  44 aatttatgcacggtgcataaggatttctttatgcaccataaccgc 88  Q
    |||||||||| | ||||||| |||||| |||||||||||||||||    
T  44915334 aatttatgcaggctgcataaagatttccttatgcaccataaccgc 44915290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 63; Significance: 2e-27; HSPs: 30)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 15 - 93
Target Start/End: Original strand, 15493276 - 15493354
Alignment:
Q  15 tttgagggtgtaggaagcaattatgttggaatttatgcacggtgcataaggatttctttatgcaccataaccgctcccc 93  Q
    |||| |||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||| ||||||    
T  15493276 tttgggggtgtaggaagcaattatgttgggatttatgcacggtgcataaggatttccttatgcaccataaccactcccc 15493354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 15 - 92
Target Start/End: Original strand, 6900905 - 6900982
Alignment:
Q  15 tttgagggtgtaggaagcaattatgttggaatttatgcacggtgcataaggatttctttatgcaccataaccgctccc 92  Q
    |||| |||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||| |||||    
T  6900905 tttgggggtgtaggaagcaattatgttgggatttatgcacggtgcataaggatttccttatgcaccataaccactccc 6900982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 15 - 92
Target Start/End: Original strand, 7089184 - 7089261
Alignment:
Q  15 tttgagggtgtaggaagcaattatgttggaatttatgcacggtgcataaggatttctttatgcaccataaccgctccc 92  Q
    |||| |||||||||||||||||||||||| ||||||||||||| |||||||||||| ||||||||||||||| |||||    
T  7089184 tttgggggtgtaggaagcaattatgttgggatttatgcacggtacataaggatttccttatgcaccataaccactccc 7089261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 20 - 92
Target Start/End: Original strand, 878367 - 878439
Alignment:
Q  20 gggtgtaggaagcaattatgttggaatttatgcacggtgcataaggatttctttatgcaccataaccgctccc 92  Q
    |||||||||||| ||||||||||| ||||||||||||| |||||||||||| |||||||||||||||||||||    
T  878367 gggtgtaggaagtaattatgttgggatttatgcacggtacataaggatttccttatgcaccataaccgctccc 878439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 21 - 92
Target Start/End: Complemental strand, 34870021 - 34869950
Alignment:
Q  21 ggtgtaggaagcaattatgttggaatttatgcacggtgcataaggatttctttatgcaccataaccgctccc 92  Q
    ||||||||||||||||||||| | |||||||||||||||||||||||||| ||||||||||||||| |||||    
T  34870021 ggtgtaggaagcaattatgttaggatttatgcacggtgcataaggatttccttatgcaccataaccactccc 34869950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 15 - 93
Target Start/End: Original strand, 1449644 - 1449722
Alignment:
Q  15 tttgagggtgtaggaagcaattatgttggaatttatgcacggtgcataaggatttctttatgcaccataaccgctcccc 93  Q
    |||| ||||||||||| |||||||||||| |||||||||||||||||||||||||  ||||||||||||||| ||||||    
T  1449644 tttgggggtgtaggaaacaattatgttgggatttatgcacggtgcataaggattttcttatgcaccataaccactcccc 1449722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 20 - 86
Target Start/End: Original strand, 31216769 - 31216835
Alignment:
Q  20 gggtgtaggaagcaattatgttggaatttatgcacggtgcataaggatttctttatgcaccataacc 86  Q
    ||||||||||||||||||||||||||||||| |||||| |||||| ||||| |||||||||||||||    
T  31216769 gggtgtaggaagcaattatgttggaatttatacacggtccataagaatttccttatgcaccataacc 31216835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 41 - 92
Target Start/End: Original strand, 7765402 - 7765453
Alignment:
Q  41 tggaatttatgcacggtgcataaggatttctttatgcaccataaccgctccc 92  Q
    |||||||||||||||||||||||||||||| ||||||||||||||| |||||    
T  7765402 tggaatttatgcacggtgcataaggatttccttatgcaccataaccactccc 7765453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 43 - 88
Target Start/End: Original strand, 10588953 - 10588998
Alignment:
Q  43 gaatttatgcacggtgcataaggatttctttatgcaccataaccgc 88  Q
    ||||||||||| |||||||||||||||| |||||||||||||||||    
T  10588953 gaatttatgcagggtgcataaggatttccttatgcaccataaccgc 10588998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 43 - 88
Target Start/End: Complemental strand, 22857532 - 22857487
Alignment:
Q  43 gaatttatgcacggtgcataaggatttctttatgcaccataaccgc 88  Q
    ||||||||||| |||||||||||||||| |||||||||||||||||    
T  22857532 gaatttatgcagggtgcataaggatttccttatgcaccataaccgc 22857487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 45 - 85
Target Start/End: Original strand, 15034993 - 15035033
Alignment:
Q  45 atttatgcacggtgcataaggatttctttatgcaccataac 85  Q
    |||||||||||||||||||||||||| ||||||||||||||    
T  15034993 atttatgcacggtgcataaggatttccttatgcaccataac 15035033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 43 - 95
Target Start/End: Complemental strand, 19281327 - 19281275
Alignment:
Q  43 gaatttatgcacggtgcataaggatttctttatgcaccataaccgctcccctc 95  Q
    ||||||||||| |||||| ||||||||| ||||||||||||||||| ||||||    
T  19281327 gaatttatgcagggtgcacaaggatttccttatgcaccataaccgcgcccctc 19281275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 15 - 67
Target Start/End: Original strand, 35121491 - 35121542
Alignment:
Q  15 tttgagggtgtaggaagcaattatgttggaatttatgcacggtgcataaggat 67  Q
    |||| |||||||| ||||||||||||||| |||||||||||||||||||||||    
T  35121491 tttgggggtgtag-aagcaattatgttgggatttatgcacggtgcataaggat 35121542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 46 - 85
Target Start/End: Original strand, 12394399 - 12394438
Alignment:
Q  46 tttatgcacggtgcataaggatttctttatgcaccataac 85  Q
    ||||||||||||||||||||||||| ||||||||||||||    
T  12394399 tttatgcacggtgcataaggatttccttatgcaccataac 12394438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 45 - 88
Target Start/End: Complemental strand, 19284413 - 19284370
Alignment:
Q  45 atttatgcacggtgcataaggatttctttatgcaccataaccgc 88  Q
    ||||||||| |||||||||||||||| |||||||||||||||||    
T  19284413 atttatgcagggtgcataaggatttccttatgcaccataaccgc 19284370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 45 - 88
Target Start/End: Original strand, 21384991 - 21385034
Alignment:
Q  45 atttatgcacggtgcataaggatttctttatgcaccataaccgc 88  Q
    ||||||||| |||||||||||||||| |||||||||||||||||    
T  21384991 atttatgcagggtgcataaggatttccttatgcaccataaccgc 21385034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 28 - 67
Target Start/End: Complemental strand, 33345395 - 33345356
Alignment:
Q  28 gaagcaattatgttggaatttatgcacggtgcataaggat 67  Q
    |||||||||||||||| |||||||||||||||||||||||    
T  33345395 gaagcaattatgttgggatttatgcacggtgcataaggat 33345356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 46 - 85
Target Start/End: Original strand, 33346390 - 33346429
Alignment:
Q  46 tttatgcacggtgcataaggatttctttatgcaccataac 85  Q
    ||||||||||||||||||||||||| ||||||||||||||    
T  33346390 tttatgcacggtgcataaggatttccttatgcaccataac 33346429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 15 - 61
Target Start/End: Complemental strand, 1536860 - 1536814
Alignment:
Q  15 tttgagggtgtaggaagcaattatgttggaatttatgcacggtgcat 61  Q
    |||| ||||||||||||||||||| |||| |||||||||||||||||    
T  1536860 tttgggggtgtaggaagcaattatattgggatttatgcacggtgcat 1536814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 47 - 93
Target Start/End: Complemental strand, 18755703 - 18755657
Alignment:
Q  47 ttatgcacggtgcataaggatttctttatgcaccataaccgctcccc 93  Q
    |||||||| ||||||||||||||| ||||||||||||||| ||||||    
T  18755703 ttatgcaccgtgcataaggatttccttatgcaccataaccactcccc 18755657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 43 - 88
Target Start/End: Complemental strand, 25119150 - 25119105
Alignment:
Q  43 gaatttatgcacggtgcataaggatttctttatgcaccataaccgc 88  Q
    ||||||||||| |||||||||| ||||| |||||||||||||||||    
T  25119150 gaatttatgcagggtgcataagaatttccttatgcaccataaccgc 25119105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 45 - 86
Target Start/End: Original strand, 30909441 - 30909482
Alignment:
Q  45 atttatgcacggtgcataaggatttctttatgcaccataacc 86  Q
    |||||||||||||||||||||| ||| |||||||||||||||    
T  30909441 atttatgcacggtgcataaggaattccttatgcaccataacc 30909482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 45 - 88
Target Start/End: Complemental strand, 10698619 - 10698576
Alignment:
Q  45 atttatgcacggtgcataaggatttctttatgcaccataaccgc 88  Q
    ||||||||| |||||| ||||||||| |||||||||||||||||    
T  10698619 atttatgcagggtgcacaaggatttccttatgcaccataaccgc 10698576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 43 - 86
Target Start/End: Original strand, 20522848 - 20522891
Alignment:
Q  43 gaatttatgcacggtgcataaggatttctttatgcaccataacc 86  Q
    ||||||||| | |||||||||||||||| |||||||||||||||    
T  20522848 gaatttatgtagggtgcataaggatttccttatgcaccataacc 20522891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 45 - 88
Target Start/End: Original strand, 22857679 - 22857722
Alignment:
Q  45 atttatgcacggtgcataaggatttctttatgcaccataaccgc 88  Q
    ||||||||| |||||||||||||||  |||||||||||||||||    
T  22857679 atttatgcagggtgcataaggattttcttatgcaccataaccgc 22857722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 45 - 88
Target Start/End: Original strand, 25119472 - 25119515
Alignment:
Q  45 atttatgcacggtgcataaggatttctttatgcaccataaccgc 88  Q
    ||||||||| | |||||||||||||| |||||||||||||||||    
T  25119472 atttatgcaggctgcataaggatttccttatgcaccataaccgc 25119515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 45 - 86
Target Start/End: Complemental strand, 14237820 - 14237779
Alignment:
Q  45 atttatgcacggtgcataaggatttctttatgcaccataacc 86  Q
    ||||||| | |||||||||||||||| |||||||||||||||    
T  14237820 atttatgtagggtgcataaggatttccttatgcaccataacc 14237779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 39 - 88
Target Start/End: Original strand, 18612358 - 18612407
Alignment:
Q  39 gttggaatttatgcacggtgcataaggatttctttatgcaccataaccgc 88  Q
    ||||| ||||||| |||||||||||||||||| |||||||  ||||||||    
T  18612358 gttgggatttatgtacggtgcataaggatttccttatgcatgataaccgc 18612407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 44 - 88
Target Start/End: Original strand, 29163718 - 29163762
Alignment:
Q  44 aatttatgcacggtgcataaggatttctttatgcaccataaccgc 88  Q
    ||||||||||||||||||||| ||||| |||||||  ||||||||    
T  29163718 aatttatgcacggtgcataagaatttccttatgcatgataaccgc 29163762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 53 - 85
Target Start/End: Complemental strand, 34399680 - 34399648
Alignment:
Q  53 acggtgcataaggatttctttatgcaccataac 85  Q
    |||||||||||||||||| ||||||||||||||    
T  34399680 acggtgcataaggatttccttatgcaccataac 34399648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 63; Significance: 2e-27; HSPs: 47)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 15 - 93
Target Start/End: Original strand, 14394570 - 14394648
Alignment:
Q  15 tttgagggtgtaggaagcaattatgttggaatttatgcacggtgcataaggatttctttatgcaccataaccgctcccc 93  Q
    |||| |||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||| ||||||    
T  14394570 tttgggggtgtaggaagcaattatgttgggatttatgcacggtgcataaggatttccttatgcaccataaccactcccc 14394648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 15 - 92
Target Start/End: Complemental strand, 14940320 - 14940243
Alignment:
Q  15 tttgagggtgtaggaagcaattatgttggaatttatgcacggtgcataaggatttctttatgcaccataaccgctccc 92  Q
    |||| |||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||| |||||    
T  14940320 tttgggggtgtaggaagcaattatgttgggatttatgcacggtgcataaggatttccttatgcaccataaccactccc 14940243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 20 - 92
Target Start/End: Complemental strand, 26637796 - 26637724
Alignment:
Q  20 gggtgtaggaagcaattatgttggaatttatgcacggtgcataaggatttctttatgcaccataaccgctccc 92  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||| |||||    
T  26637796 gggtgtaggaagcaattatgttgggatttatgcacggtgcataaggatttccttatgcaccataaccactccc 26637724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 22 - 93
Target Start/End: Complemental strand, 28069312 - 28069241
Alignment:
Q  22 gtgtaggaagcaattatgttggaatttatgcacggtgcataaggatttctttatgcaccataaccgctcccc 93  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||| |||| |||||||||||||||||    
T  28069312 gtgtaggaagcaattatgttggaatttatgctcggtgcataaggatttccttatacaccataaccgctcccc 28069241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 15 - 92
Target Start/End: Original strand, 37456782 - 37456859
Alignment:
Q  15 tttgagggtgtaggaagcaattatgttggaatttatgcacggtgcataaggatttctttatgcaccataaccgctccc 92  Q
    |||| |||||||||||||||||||||||| ||||||||| |||||||||||||||| ||||||||||||||| |||||    
T  37456782 tttgggggtgtaggaagcaattatgttgggatttatgcatggtgcataaggatttccttatgcaccataaccactccc 37456859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 21 - 93
Target Start/End: Complemental strand, 3883993 - 3883921
Alignment:
Q  21 ggtgtaggaagcaattatgttggaatttatgcacggtgcataaggatttctttatgcaccataaccgctcccc 93  Q
    |||||||||||||||||| |||| |||||||||||||||||||||||||| ||||||||||||||| ||||||    
T  3883993 ggtgtaggaagcaattatattgggatttatgcacggtgcataaggatttccttatgcaccataaccactcccc 3883921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 15 - 92
Target Start/End: Original strand, 30783560 - 30783636
Alignment:
Q  15 tttgagggtgtaggaagcaattatgttggaatttatgcacggtgcataaggatttctttatgcaccataaccgctccc 92  Q
    |||| ||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||| ||||||| |||||    
T  30783560 tttgggggtgtaggaagcaattatgttgga-tttatgcacggtgcataaggatttccttatgcatcataaccactccc 30783636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 22 - 92
Target Start/End: Original strand, 15416773 - 15416843
Alignment:
Q  22 gtgtaggaagcaattatgttggaatttatgcacggtgcataaggatttctttatgcaccataaccgctccc 92  Q
    |||||||||||||| ||||||| |||||||||||||||||||||||||| ||||||| ||||||| |||||    
T  15416773 gtgtaggaagcaatcatgttgggatttatgcacggtgcataaggatttccttatgcatcataaccactccc 15416843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 15 - 92
Target Start/End: Original strand, 13553085 - 13553162
Alignment:
Q  15 tttgagggtgtaggaagcaattatgttggaatttatgcacggtgcataaggatttctttatgcaccataaccgctccc 92  Q
    ||||| |||||||||||||||||| || | |||||| ||||||||||||||||||| ||||||||||||||| |||||    
T  13553085 tttgaaggtgtaggaagcaattatattaggatttatacacggtgcataaggatttccttatgcaccataaccactccc 13553162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 23 - 92
Target Start/End: Original strand, 34330166 - 34330230
Alignment:
Q  23 tgtaggaagcaattatgttggaatttatgcacggtgcataaggatttctttatgcaccataaccgctccc 92  Q
    |||| |||||||||||||||||||||||||||||||||||||||||     |||||||||||||| ||||    
T  34330166 tgtatgaagcaattatgttggaatttatgcacggtgcataaggatt-----atgcaccataaccgatccc 34330230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 45 - 91
Target Start/End: Original strand, 13363796 - 13363842
Alignment:
Q  45 atttatgcacggtgcataaggatttctttatgcaccataaccgctcc 91  Q
    |||||||||||||||||||||||||| || |||||||||||||||||    
T  13363796 atttatgcacggtgcataaggatttccttgtgcaccataaccgctcc 13363842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 43 - 88
Target Start/End: Complemental strand, 15559093 - 15559048
Alignment:
Q  43 gaatttatgcacggtgcataaggatttctttatgcaccataaccgc 88  Q
    ||||||||||| |||||||||||||||| |||||||||||||||||    
T  15559093 gaatttatgcatggtgcataaggatttccttatgcaccataaccgc 15559048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 44 - 88
Target Start/End: Complemental strand, 3340633 - 3340589
Alignment:
Q  44 aatttatgcacggtgcataaggatttctttatgcaccataaccgc 88  Q
    |||||||||| |||||||||||||||| |||||||||||||||||    
T  3340633 aatttatgcagggtgcataaggatttccttatgcaccataaccgc 3340589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 46 - 85
Target Start/End: Complemental strand, 13362816 - 13362777
Alignment:
Q  46 tttatgcacggtgcataaggatttctttatgcaccataac 85  Q
    ||||||||||||||||||||||||| ||||||||||||||    
T  13362816 tttatgcacggtgcataaggatttccttatgcaccataac 13362777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 45 - 88
Target Start/End: Original strand, 22695542 - 22695585
Alignment:
Q  45 atttatgcacggtgcataaggatttctttatgcaccataaccgc 88  Q
    ||||||||| |||||||||||||||| |||||||||||||||||    
T  22695542 atttatgcaaggtgcataaggatttccttatgcaccataaccgc 22695585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 43 - 86
Target Start/End: Complemental strand, 23155569 - 23155526
Alignment:
Q  43 gaatttatgcacggtgcataaggatttctttatgcaccataacc 86  Q
    ||||||||||| |||||||||||||||| |||||||||||||||    
T  23155569 gaatttatgcagggtgcataaggatttccttatgcaccataacc 23155526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 46 - 85
Target Start/End: Original strand, 25017236 - 25017275
Alignment:
Q  46 tttatgcacggtgcataaggatttctttatgcaccataac 85  Q
    ||||||||||||||||||||||||| ||||||||||||||    
T  25017236 tttatgcacggtgcataaggatttccttatgcaccataac 25017275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 46 - 85
Target Start/End: Original strand, 28070172 - 28070211
Alignment:
Q  46 tttatgcacggtgcataaggatttctttatgcaccataac 85  Q
    ||||||||||||||||||||||||| ||||||||||||||    
T  28070172 tttatgcacggtgcataaggatttccttatgcaccataac 28070211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 45 - 88
Target Start/End: Original strand, 39861782 - 39861825
Alignment:
Q  45 atttatgcacggtgcataaggatttctttatgcaccataaccgc 88  Q
    ||||||||| |||||||||||||||| |||||||||||||||||    
T  39861782 atttatgcagggtgcataaggatttccttatgcaccataaccgc 39861825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 45 - 87
Target Start/End: Original strand, 11660984 - 11661026
Alignment:
Q  45 atttatgcacggtgcataaggatttctttatgcaccataaccg 87  Q
    ||||||||| |||||||||||||||| ||||||||||||||||    
T  11660984 atttatgcagggtgcataaggatttccttatgcaccataaccg 11661026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 43 - 88
Target Start/End: Complemental strand, 11660837 - 11660792
Alignment:
Q  43 gaatttatgcacggtgcataaggatttctttatgcaccataaccgc 88  Q
    ||||||||| | |||||||||||||||| |||||||||||||||||    
T  11660837 gaatttatgtagggtgcataaggatttccttatgcaccataaccgc 11660792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 43 - 88
Target Start/End: Complemental strand, 16552291 - 16552246
Alignment:
Q  43 gaatttatgcacggtgcataaggatttctttatgcaccataaccgc 88  Q
    ||||||||||| |||||||| ||||||| |||||||||||||||||    
T  16552291 gaatttatgcagggtgcatacggatttccttatgcaccataaccgc 16552246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 43 - 88
Target Start/End: Complemental strand, 39086561 - 39086516
Alignment:
Q  43 gaatttatgcacggtgcataaggatttctttatgcaccataaccgc 88  Q
    ||||||||||| |||||||||||||||  |||||||||||||||||    
T  39086561 gaatttatgcagggtgcataaggattttcttatgcaccataaccgc 39086516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 45 - 85
Target Start/End: Original strand, 23155845 - 23155885
Alignment:
Q  45 atttatgcacggtgcataaggatttctttatgcaccataac 85  Q
    ||||||||| |||||||||||||||| ||||||||||||||    
T  23155845 atttatgcaaggtgcataaggatttcattatgcaccataac 23155885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 45 - 93
Target Start/End: Complemental strand, 35662109 - 35662061
Alignment:
Q  45 atttatgcacggtgcataaggatttctttatgcaccataaccgctcccc 93  Q
    ||||||| | |||||||||||||||| ||||||||||||||||| ||||    
T  35662109 atttatgtagggtgcataaggatttccttatgcaccataaccgcccccc 35662061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 44 - 88
Target Start/End: Original strand, 39166341 - 39166385
Alignment:
Q  44 aatttatgcacggtgcataaggatttctttatgcaccataaccgc 88  Q
    |||||||||| |||||||||||||||  |||||||||||||||||    
T  39166341 aatttatgcagggtgcataaggattttcttatgcaccataaccgc 39166385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 201 - 232
Target Start/End: Complemental strand, 6689942 - 6689911
Alignment:
Q  201 ataataaagcaaacttagtattttggcaagtt 232  Q
    ||||||||||||||||||||||||||||||||    
T  6689942 ataataaagcaaacttagtattttggcaagtt 6689911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 45 - 88
Target Start/End: Complemental strand, 20134241 - 20134198
Alignment:
Q  45 atttatgcacggtgcataaggatttctttatgcaccataaccgc 88  Q
    ||||||||| | |||||||||||||| |||||||||||||||||    
T  20134241 atttatgcaggctgcataaggatttccttatgcaccataaccgc 20134198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 45 - 88
Target Start/End: Original strand, 20134401 - 20134444
Alignment:
Q  45 atttatgcacggtgcataaggatttctttatgcaccataaccgc 88  Q
    |||||||||  ||||||||||||||| |||||||||||||||||    
T  20134401 atttatgcagagtgcataaggatttccttatgcaccataaccgc 20134444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 45 - 88
Target Start/End: Original strand, 20696329 - 20696372
Alignment:
Q  45 atttatgcacggtgcataaggatttctttatgcaccataaccgc 88  Q
    ||||||||| |||| ||||||||||| |||||||||||||||||    
T  20696329 atttatgcagggtgaataaggatttccttatgcaccataaccgc 20696372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 46 - 85
Target Start/End: Original strand, 23335726 - 23335765
Alignment:
Q  46 tttatgcacggtgcataaggatttctttatgcaccataac 85  Q
    ||||||||||||||||| ||||||| ||||||||||||||    
T  23335726 tttatgcacggtgcatacggatttccttatgcaccataac 23335765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 43 - 86
Target Start/End: Original strand, 25671288 - 25671331
Alignment:
Q  43 gaatttatgcacggtgcataaggatttctttatgcaccataacc 86  Q
    ||||||||||| ||| |||||||||||| |||||||||||||||    
T  25671288 gaatttatgcatggtacataaggatttccttatgcaccataacc 25671331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 46 - 85
Target Start/End: Complemental strand, 34329173 - 34329134
Alignment:
Q  46 tttatgcacggtgcataaggatttctttatgcaccataac 85  Q
    |||||||||||||||||| |||||| ||||||||||||||    
T  34329173 tttatgcacggtgcataaagatttccttatgcaccataac 34329134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 45 - 88
Target Start/End: Original strand, 35662235 - 35662278
Alignment:
Q  45 atttatgcacggtgcataaggatttctttatgcaccataaccgc 88  Q
    ||||||||| |||||||||| ||||| |||||||||||||||||    
T  35662235 atttatgcagggtgcataagtatttccttatgcaccataaccgc 35662278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 93
Target Start/End: Complemental strand, 7286797 - 7286747
Alignment:
Q  43 gaatttatgcacggtgcataaggatttctttatgcaccataaccgctcccc 93  Q
    ||||||||||| ||||||||| |||||| |||| |||||||||||| ||||    
T  7286797 gaatttatgcagggtgcataaagatttccttatacaccataaccgcacccc 7286747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 87
Target Start/End: Original strand, 22671999 - 22672041
Alignment:
Q  45 atttatgcacggtgcataaggatttctttatgcaccataaccg 87  Q
    ||||||||| | |||||||||||||| ||||||||||||||||    
T  22671999 atttatgcaggatgcataaggatttccttatgcaccataaccg 22672041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 50 - 92
Target Start/End: Original strand, 23948588 - 23948630
Alignment:
Q  50 tgcacggtgcataaggatttctttatgcaccataaccgctccc 92  Q
    ||||||||||||||||||||  ||||||||||||||| |||||    
T  23948588 tgcacggtgcataaggattttcttatgcaccataaccactccc 23948630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 87
Target Start/End: Complemental strand, 39861621 - 39861579
Alignment:
Q  45 atttatgcacggtgcataaggatttctttatgcaccataaccg 87  Q
    ||||||||| |||||||||||||||| |||||| |||||||||    
T  39861621 atttatgcagggtgcataaggatttccttatgccccataaccg 39861579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 44 - 85
Target Start/End: Complemental strand, 703773 - 703732
Alignment:
Q  44 aatttatgcacggtgcataaggatttctttatgcaccataac 85  Q
    |||||||||| | |||||||||||||| ||||||||||||||    
T  703773 aatttatgcaggatgcataaggatttccttatgcaccataac 703732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 43 - 88
Target Start/End: Original strand, 5411756 - 5411801
Alignment:
Q  43 gaatttatgcacggtgcataaggatttctttatgcaccataaccgc 88  Q
    ||||||||| | |||||||||| ||||| |||||||||||||||||    
T  5411756 gaatttatgaagggtgcataagaatttccttatgcaccataaccgc 5411801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 45 - 78
Target Start/End: Complemental strand, 16667700 - 16667667
Alignment:
Q  45 atttatgcacggtgcataaggatttctttatgca 78  Q
    |||||||||||||||||||||||||| |||||||    
T  16667700 atttatgcacggtgcataaggatttccttatgca 16667667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 45 - 86
Target Start/End: Complemental strand, 23334752 - 23334712
Alignment:
Q  45 atttatgcacggtgcataaggatttctttatgcaccataacc 86  Q
    ||||||||||||||||||| |||||| |||||||||||||||    
T  23334752 atttatgcacggtgcataa-gatttccttatgcaccataacc 23334712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 47 - 92
Target Start/End: Complemental strand, 25189862 - 25189817
Alignment:
Q  47 ttatgcacggtgcataaggatttctttatgcaccataaccgctccc 92  Q
    ||||||||||||||||||||  || ||||||||||||||| |||||    
T  25189862 ttatgcacggtgcataaggaaatccttatgcaccataaccactccc 25189817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 55 - 88
Target Start/End: Original strand, 25545584 - 25545617
Alignment:
Q  55 ggtgcataaggatttctttatgcaccataaccgc 88  Q
    |||||||||||||||| |||||||||||||||||    
T  25545584 ggtgcataaggatttccttatgcaccataaccgc 25545617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 43 - 88
Target Start/End: Original strand, 36864268 - 36864313
Alignment:
Q  43 gaatttatgcacggtgcataaggatttctttatgcaccataaccgc 88  Q
    |||||||||||  ||||||||||||||| |||| ||||||||||||    
T  36864268 gaatttatgcagagtgcataaggatttccttatacaccataaccgc 36864313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 88
Target Start/End: Original strand, 15059635 - 15059679
Alignment:
Q  45 atttatgcacggtgcataagg-atttctttatgcaccataaccgc 88  Q
    ||||||||| ||||||||||| ||||| |||||||||||||||||    
T  15059635 atttatgcagggtgcataagggatttccttatgcaccataaccgc 15059679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 85
Target Start/End: Original strand, 22830790 - 22830830
Alignment:
Q  45 atttatgcacggtgcataaggatttctttatgcaccataac 85  Q
    |||||||||  ||||||||||||||| ||||||||||||||    
T  22830790 atttatgcagtgtgcataaggatttccttatgcaccataac 22830830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 63; Significance: 2e-27; HSPs: 52)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 15 - 93
Target Start/End: Complemental strand, 9595944 - 9595866
Alignment:
Q  15 tttgagggtgtaggaagcaattatgttggaatttatgcacggtgcataaggatttctttatgcaccataaccgctcccc 93  Q
    |||| |||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||| ||||||    
T  9595944 tttgggggtgtaggaagcaattatgttgggatttatgcacggtgcataaggatttccttatgcaccataaccactcccc 9595866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 15 - 93
Target Start/End: Complemental strand, 19384453 - 19384375
Alignment:
Q  15 tttgagggtgtaggaagcaattatgttggaatttatgcacggtgcataaggatttctttatgcaccataaccgctcccc 93  Q
    |||| |||||||||||||||||||||||| |||||||||||||||||||| ||||| ||||||||||||||||||||||    
T  19384453 tttgggggtgtaggaagcaattatgttgggatttatgcacggtgcataagaatttccttatgcaccataaccgctcccc 19384375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 19 - 92
Target Start/End: Complemental strand, 6097644 - 6097571
Alignment:
Q  19 agggtgtaggaagcaattatgttggaatttatgcacggtgcataaggatttctttatgcaccataaccgctccc 92  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||| |||||    
T  6097644 agggtgtaggaagcaattatgttgggatttatgcacggtgcataaggatttccttatgcaccataaccactccc 6097571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 21 - 94
Target Start/End: Original strand, 54379270 - 54379343
Alignment:
Q  21 ggtgtaggaagcaattatgttggaatttatgcacggtgcataaggatttctttatgcaccataaccgctcccct 94  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||| |||||||    
T  54379270 ggtgtaggaagcaattatgttgggatttatgcacggtgcataaggatttccttatgcaccataaccactcccct 54379343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 20 - 92
Target Start/End: Complemental strand, 30947870 - 30947798
Alignment:
Q  20 gggtgtaggaagcaattatgttggaatttatgcacggtgcataaggatttctttatgcaccataaccgctccc 92  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||| |||||    
T  30947870 gggtgtaggaagcaattatgttgggatttatgcacggtgcataaggatttccttatgcaccataaccactccc 30947798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 23 - 93
Target Start/End: Original strand, 19284781 - 19284851
Alignment:
Q  23 tgtaggaagcaattatgttggaatttatgcacggtgcataaggatttctttatgcaccataaccgctcccc 93  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||| ||||||    
T  19284781 tgtaggaagcaattatgttgggatttatgcacggtgcataaggatttccttatgcaccataaccactcccc 19284851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 15 - 85
Target Start/End: Original strand, 50755164 - 50755234
Alignment:
Q  15 tttgagggtgtaggaagcaattatgttggaatttatgcacggtgcataaggatttctttatgcaccataac 85  Q
    |||| |||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||    
T  50755164 tttgggggtgtaggaagcaattatgttgggatttatgcacggtgcataaggatttccttatgcaccataac 50755234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 23 - 92
Target Start/End: Complemental strand, 3475363 - 3475294
Alignment:
Q  23 tgtaggaagcaattatgttggaatttatgcacggtgcataaggatttctttatgcaccataaccgctccc 92  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||| |||||    
T  3475363 tgtaggaagcaattatgttgggatttatgcacggtgcataaggatttccttatgcaccataaccactccc 3475294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 15 - 92
Target Start/End: Original strand, 9106369 - 9106446
Alignment:
Q  15 tttgagggtgtaggaagcaattatgttggaatttatgcacggtgcataaggatttctttatgcaccataaccgctccc 92  Q
    |||| ||||||||||||||||||| |||| |||||||||||||||||||||||||| ||||||||||||||| |||||    
T  9106369 tttgggggtgtaggaagcaattatattgggatttatgcacggtgcataaggatttccttatgcaccataaccactccc 9106446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 15 - 92
Target Start/End: Original strand, 10986454 - 10986531
Alignment:
Q  15 tttgagggtgtaggaagcaattatgttggaatttatgcacggtgcataaggatttctttatgcaccataaccgctccc 92  Q
    ||||||| ||||||||||||||||||||  |||||||||||||||||||||||||| ||||||||||||||| |||||    
T  10986454 tttgaggatgtaggaagcaattatgttgagatttatgcacggtgcataaggatttccttatgcaccataaccactccc 10986531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 15 - 92
Target Start/End: Complemental strand, 26662502 - 26662425
Alignment:
Q  15 tttgagggtgtaggaagcaattatgttggaatttatgcacggtgcataaggatttctttatgcaccataaccgctccc 92  Q
    |||| |||||||||||||||||||||||| |||||||||| ||||||||||||||| ||||||||||||||| |||||    
T  26662502 tttgggggtgtaggaagcaattatgttgggatttatgcacagtgcataaggatttccttatgcaccataaccactccc 26662425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 20 - 92
Target Start/End: Complemental strand, 51361590 - 51361518
Alignment:
Q  20 gggtgtaggaagcaattatgttggaatttatgcacggtgcataaggatttctttatgcaccataaccgctccc 92  Q
    |||||||||||||||||||||| | |||||| ||||||||||||||||||| |||||||||||||||||||||    
T  51361590 gggtgtaggaagcaattatgttaggatttatacacggtgcataaggatttccttatgcaccataaccgctccc 51361518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 15 - 92
Target Start/End: Complemental strand, 33413977 - 33413899
Alignment:
Q  15 tttgagggtgtaggaagcaattatgttggaatttatgcacggtgcataa-ggatttctttatgcaccataaccgctccc 92  Q
    |||||||||||||||||||||||| |||| ||||||||||||||||||| ||||||| ||||||||||||||| |||||    
T  33413977 tttgagggtgtaggaagcaattatattgggatttatgcacggtgcataagggatttccttatgcaccataaccactccc 33413899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 15 - 84
Target Start/End: Complemental strand, 2941890 - 2941821
Alignment:
Q  15 tttgagggtgtaggaagcaattatgttggaatttatgcacggtgcataaggatttctttatgcaccataa 84  Q
    |||| |||||||| ||||||||||||||| |||||||||||||||||||||||||| |||||||||||||    
T  2941890 tttgggggtgtagaaagcaattatgttgggatttatgcacggtgcataaggatttccttatgcaccataa 2941821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 15 - 92
Target Start/End: Original strand, 26960728 - 26960805
Alignment:
Q  15 tttgagggtgtaggaagcaattatgttggaatttatgcacggtgcataaggatttctttatgcaccataaccgctccc 92  Q
    |||| ||||||||||||||||||| |||| ||||||||||||||||||| |||||| ||||||||||||||| |||||    
T  26960728 tttgggggtgtaggaagcaattatattgggatttatgcacggtgcataaagatttccttatgcaccataaccactccc 26960805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 15 - 92
Target Start/End: Complemental strand, 46237722 - 46237645
Alignment:
Q  15 tttgagggtgtaggaagcaattatgttggaatttatgcacggtgcataaggatttctttatgcaccataaccgctccc 92  Q
    |||| ||| ||| |||||||||||||||| |||||||||||||| ||||||||||| ||||||||||||||| |||||    
T  46237722 tttgggggagtatgaagcaattatgttgggatttatgcacggtgtataaggatttccttatgcaccataaccactccc 46237645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 45 - 92
Target Start/End: Complemental strand, 16276711 - 16276664
Alignment:
Q  45 atttatgcacggtgcataaggatttctttatgcaccataaccgctccc 92  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  16276711 atttatgcacggtgcataaggatttctttatgcaccataaccgctccc 16276664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 39 - 92
Target Start/End: Original strand, 8719133 - 8719186
Alignment:
Q  39 gttggaatttatgcacggtgcataaggatttctttatgcaccataaccgctccc 92  Q
    ||||| |||||||||||||||||||||||||| |||||||||||||||||||||    
T  8719133 gttgggatttatgcacggtgcataaggatttccttatgcaccataaccgctccc 8719186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 39 - 92
Target Start/End: Original strand, 9071020 - 9071073
Alignment:
Q  39 gttggaatttatgcacggtgcataaggatttctttatgcaccataaccgctccc 92  Q
    ||||| |||||||||||||||||||||||||| |||||||||||||||||||||    
T  9071020 gttgggatttatgcacggtgcataaggatttccttatgcaccataaccgctccc 9071073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 15 - 92
Target Start/End: Original strand, 47335134 - 47335216
Alignment:
Q  15 tttgagggtgtaggaagcaattatgttggaatttatgcacggtgcat-----aaggatttctttatgcaccataaccgctccc 92  Q
    |||| ||||||||||| |||||||||||| |||||||||||||||||     ||||||||| ||||||||||||||| |||||    
T  47335134 tttgggggtgtaggaaacaattatgttgggatttatgcacggtgcataaggaaaggatttccttatgcaccataaccactccc 47335216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 15 - 64
Target Start/End: Original strand, 31853158 - 31853207
Alignment:
Q  15 tttgagggtgtaggaagcaattatgttggaatttatgcacggtgcataag 64  Q
    ||||| ||||||||||||||||||||||| ||||||||||||||||||||    
T  31853158 tttgaaggtgtaggaagcaattatgttgggatttatgcacggtgcataag 31853207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 45 - 93
Target Start/End: Complemental strand, 34562441 - 34562393
Alignment:
Q  45 atttatgcacggtgcataaggatttctttatgcaccataaccgctcccc 93  Q
    |||||||||||||||||||||||||| ||||||||||||||| ||||||    
T  34562441 atttatgcacggtgcataaggatttccttatgcaccataaccactcccc 34562393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 45 - 99
Target Start/End: Original strand, 36185907 - 36185961
Alignment:
Q  45 atttatgcacggtgcataaggatttctttatgcaccataaccgctcccctctcaa 99  Q
    ||||||||| |||||||||||||||| ||||||||||||||||| ||| ||||||    
T  36185907 atttatgcagggtgcataaggatttccttatgcaccataaccgcacccatctcaa 36185961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 45 - 88
Target Start/End: Complemental strand, 8036842 - 8036799
Alignment:
Q  45 atttatgcacggtgcataaggatttctttatgcaccataaccgc 88  Q
    ||||||||| |||||||||||||||| |||||||||||||||||    
T  8036842 atttatgcagggtgcataaggatttccttatgcaccataaccgc 8036799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 46 - 85
Target Start/End: Original strand, 19385334 - 19385373
Alignment:
Q  46 tttatgcacggtgcataaggatttctttatgcaccataac 85  Q
    ||||||||||||||||||||||||| ||||||||||||||    
T  19385334 tttatgcacggtgcataaggatttccttatgcaccataac 19385373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 45 - 88
Target Start/End: Complemental strand, 38345322 - 38345279
Alignment:
Q  45 atttatgcacggtgcataaggatttctttatgcaccataaccgc 88  Q
    ||||||||| ||||||||| ||||||||||||||||||||||||    
T  38345322 atttatgcagggtgcataaagatttctttatgcaccataaccgc 38345279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 45 - 88
Target Start/End: Complemental strand, 47225802 - 47225759
Alignment:
Q  45 atttatgcacggtgcataaggatttctttatgcaccataaccgc 88  Q
    ||||||||| ||||||||||||||| ||||||||||||||||||    
T  47225802 atttatgcagggtgcataaggatttgtttatgcaccataaccgc 47225759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 45 - 88
Target Start/End: Complemental strand, 50416522 - 50416479
Alignment:
Q  45 atttatgcacggtgcataaggatttctttatgcaccataaccgc 88  Q
    ||||||||| |||||||||||||||| |||||||||||||||||    
T  50416522 atttatgcagggtgcataaggatttccttatgcaccataaccgc 50416479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 45 - 88
Target Start/End: Original strand, 50416566 - 50416609
Alignment:
Q  45 atttatgcacggtgcataaggatttctttatgcaccataaccgc 88  Q
    ||||||||| |||||||||||||||| |||||||||||||||||    
T  50416566 atttatgcagggtgcataaggatttccttatgcaccataaccgc 50416609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 46 - 85
Target Start/End: Original strand, 51362457 - 51362496
Alignment:
Q  46 tttatgcacggtgcataaggatttctttatgcaccataac 85  Q
    ||||||||||||||||||||||||| ||||||||||||||    
T  51362457 tttatgcacggtgcataaggatttccttatgcaccataac 51362496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 43 - 85
Target Start/End: Original strand, 27446213 - 27446255
Alignment:
Q  43 gaatttatgcacggtgcataaggatttctttatgcaccataac 85  Q
    ||||||||||| |||||||||||||||| ||||||||||||||    
T  27446213 gaatttatgcaaggtgcataaggatttccttatgcaccataac 27446255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 45 - 93
Target Start/End: Original strand, 8036991 - 8037039
Alignment:
Q  45 atttatgcacggtgcataaggatttctttatgcaccataaccgctcccc 93  Q
    ||||||||| |||||||||||||||| | ||||||||||||||| ||||    
T  8036991 atttatgcagggtgcataaggatttcctcatgcaccataaccgcacccc 8037039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 45 - 85
Target Start/End: Complemental strand, 8718148 - 8718108
Alignment:
Q  45 atttatgcacggtgcataaggatttctttatgcaccataac 85  Q
    ||||||| |||||||||||||||||| ||||||||||||||    
T  8718148 atttatgtacggtgcataaggatttccttatgcaccataac 8718108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 45 - 85
Target Start/End: Complemental strand, 9070035 - 9069995
Alignment:
Q  45 atttatgcacggtgcataaggatttctttatgcaccataac 85  Q
    ||||||| |||||||||||||||||| ||||||||||||||    
T  9070035 atttatgtacggtgcataaggatttccttatgcaccataac 9069995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 45 - 85
Target Start/End: Original strand, 47924368 - 47924408
Alignment:
Q  45 atttatgcacggtgcataaggatttctttatgcaccataac 85  Q
    ||||||||| |||||||||||||||| ||||||||||||||    
T  47924368 atttatgcagggtgcataaggatttccttatgcaccataac 47924408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 45 - 88
Target Start/End: Complemental strand, 12974054 - 12974011
Alignment:
Q  45 atttatgcacggtgcataaggatttctttatgcaccataaccgc 88  Q
    ||||| ||| |||||||||||||||| |||||||||||||||||    
T  12974054 atttaggcagggtgcataaggatttccttatgcaccataaccgc 12974011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 45 - 88
Target Start/End: Original strand, 12974193 - 12974235
Alignment:
Q  45 atttatgcacggtgcataaggatttctttatgcaccataaccgc 88  Q
    ||||||||| |||||||||||||||| |||||||||||||||||    
T  12974193 atttatgca-ggtgcataaggatttccttatgcaccataaccgc 12974235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 46 - 85
Target Start/End: Original strand, 16277433 - 16277472
Alignment:
Q  46 tttatgcacggtgcataaggatttctttatgcaccataac 85  Q
    |||||||||||||||||| |||||| ||||||||||||||    
T  16277433 tttatgcacggtgcataaagatttccttatgcaccataac 16277472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 45 - 88
Target Start/End: Original strand, 19012564 - 19012607
Alignment:
Q  45 atttatgcacggtgcataaggatttctttatgcaccataaccgc 88  Q
    ||||||||| |||||||||| ||||| |||||||||||||||||    
T  19012564 atttatgcagggtgcataagaatttccttatgcaccataaccgc 19012607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 45 - 88
Target Start/End: Complemental strand, 36185768 - 36185725
Alignment:
Q  45 atttatgcacggtgcataaggatttctttatgcaccataaccgc 88  Q
    ||||||||| | |||||||||||||| |||||||||||||||||    
T  36185768 atttatgcaggatgcataaggatttccttatgcaccataaccgc 36185725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 45 - 92
Target Start/End: Complemental strand, 41191451 - 41191404
Alignment:
Q  45 atttatgcacggtgcataaggatttctttatgcaccataaccgctccc 92  Q
    |||||||||||||||||||| |||||  |||||||||||||| |||||    
T  41191451 atttatgcacggtgcataagaatttccctatgcaccataaccactccc 41191404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 46 - 85
Target Start/End: Complemental strand, 50754052 - 50754013
Alignment:
Q  46 tttatgcacggtgcataaggatttctttatgcaccataac 85  Q
    ||||||||||||||||||||||||| ||||| ||||||||    
T  50754052 tttatgcacggtgcataaggatttccttatgtaccataac 50754013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 15 - 57
Target Start/End: Complemental strand, 7044429 - 7044387
Alignment:
Q  15 tttgagggtgtaggaagcaattatgttggaatttatgcacggt 57  Q
    |||| ||||||| |||||||||||||| |||||||||||||||    
T  7044429 tttgggggtgtaagaagcaattatgttagaatttatgcacggt 7044387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 52 - 86
Target Start/End: Complemental strand, 17620771 - 17620737
Alignment:
Q  52 cacggtgcataaggatttctttatgcaccataacc 86  Q
    ||||||||||||||||||| |||||||||||||||    
T  17620771 cacggtgcataaggatttccttatgcaccataacc 17620737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 55 - 93
Target Start/End: Complemental strand, 27068564 - 27068526
Alignment:
Q  55 ggtgcataaggatttctttatgcaccataaccgctcccc 93  Q
    |||||||||||||||| ||||||||||||||||| ||||    
T  27068564 ggtgcataaggatttccttatgcaccataaccgcacccc 27068526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 93
Target Start/End: Original strand, 47729256 - 47729306
Alignment:
Q  43 gaatttatgcacggtgcataaggatttctttatgcaccataaccgctcccc 93  Q
    ||||||||| | |||||||||||||||| |||||||||| |||||| ||||    
T  47729256 gaatttatgtagggtgcataaggatttccttatgcaccaaaaccgcacccc 47729306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 47 - 92
Target Start/End: Complemental strand, 8055008 - 8054963
Alignment:
Q  47 ttatgcacggtgcataaggatttctttatgcaccataaccgctccc 92  Q
    |||||||||||||||||| |  |||||||||||||||||| |||||    
T  8055008 ttatgcacggtgcataagaaaatctttatgcaccataaccactccc 8054963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 46 - 79
Target Start/End: Original strand, 52987669 - 52987702
Alignment:
Q  46 tttatgcacggtgcataaggatttctttatgcac 79  Q
    ||||||||||||||||||||||||| ||||||||    
T  52987669 tttatgcacggtgcataaggatttccttatgcac 52987702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 55 - 83
Target Start/End: Complemental strand, 1377830 - 1377802
Alignment:
Q  55 ggtgcataaggatttctttatgcaccata 83  Q
    |||||||||||||||||||||||||||||    
T  1377830 ggtgcataaggatttctttatgcaccata 1377802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 93
Target Start/End: Complemental strand, 16653538 - 16653491
Alignment:
Q  45 atttatgcacggtgcataaggatttctttatgcaccataaccgctcccc 93  Q
    ||||||||| |||||||||| ||||| ||||||||||||||||| ||||    
T  16653538 atttatgca-ggtgcataagaatttccttatgcaccataaccgcacccc 16653491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 93
Target Start/End: Complemental strand, 19012433 - 19012386
Alignment:
Q  45 atttatgcacggtgcataaggatttctttatgcaccataaccgctcccc 93  Q
    ||||||||| |||||||||| ||||| ||||||||||||||||| ||||    
T  19012433 atttatgca-ggtgcataagaatttccttatgcaccataaccgcacccc 19012386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 85
Target Start/End: Original strand, 47225850 - 47225890
Alignment:
Q  45 atttatgcacggtgcataaggatttctttatgcaccataac 85  Q
    ||||||||| ||| |||||||||||| ||||||||||||||    
T  47225850 atttatgcagggtacataaggatttccttatgcaccataac 47225890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074 (Bit Score: 62; Significance: 6e-27; HSPs: 1)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 15 - 92
Target Start/End: Original strand, 24376 - 24453
Alignment:
Q  15 tttgagggtgtaggaagcaattatgttggaatttatgcacggtgcataaggatttctttatgcaccataaccgctccc 92  Q
    |||| |||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||| |||||    
T  24376 tttgggggtgtaggaagcaattatgttgggatttatgcacggtgcataaggatttccttatgcaccataaccactccc 24453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0571 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0571
Description:

Target: scaffold0571; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 15 - 92
Target Start/End: Complemental strand, 617 - 540
Alignment:
Q  15 tttgagggtgtaggaagcaattatgttggaatttatgcacggtgcataaggatttctttatgcaccataaccgctccc 92  Q
    |||| ||||||||||||||||||| |||| |||||||||||||||||||||||||| ||||||||||||||| |||||    
T  617 tttgggggtgtaggaagcaattatattgggatttatgcacggtgcataaggatttccttatgcaccataaccactccc 540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 56; Significance: 2e-23; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 15 - 86
Target Start/End: Original strand, 33786 - 33857
Alignment:
Q  15 tttgagggtgtaggaagcaattatgttggaatttatgcacggtgcataaggatttctttatgcaccataacc 86  Q
    |||| |||||||||||||||||||||||| ||||||||||||||||||| |||||| |||||||||||||||    
T  33786 tttgggggtgtaggaagcaattatgttgggatttatgcacggtgcataaagatttccttatgcaccataacc 33857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0338 (Bit Score: 55; Significance: 9e-23; HSPs: 1)
Name: scaffold0338
Description:

Target: scaffold0338; HSP #1
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 15 - 85
Target Start/End: Original strand, 6485 - 6555
Alignment:
Q  15 tttgagggtgtaggaagcaattatgttggaatttatgcacggtgcataaggatttctttatgcaccataac 85  Q
    |||| |||||||||||||||||||||||| ||||||||| |||||||||||||||| ||||||||||||||    
T  6485 tttgggggtgtaggaagcaattatgttgggatttatgcatggtgcataaggatttccttatgcaccataac 6555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0581 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0581
Description:

Target: scaffold0581; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 15 - 67
Target Start/End: Complemental strand, 8385 - 8333
Alignment:
Q  15 tttgagggtgtaggaagcaattatgttggaatttatgcacggtgcataaggat 67  Q
    ||||||||||||| ||||||||||||||| |||||||||||||||||||||||    
T  8385 tttgagggtgtagaaagcaattatgttgggatttatgcacggtgcataaggat 8333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 45 - 96
Target Start/End: Complemental strand, 33658 - 33607
Alignment:
Q  45 atttatgcacggtgcataaggatttctttatgcaccataaccgctcccctct 96  Q
    ||||||||| |||||||||||||||| ||||||||||||||||| |||||||    
T  33658 atttatgcagggtgcataaggatttccttatgcaccataaccgcacccctct 33607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0129 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 43 - 88
Target Start/End: Original strand, 20120 - 20165
Alignment:
Q  43 gaatttatgcacggtgcataaggatttctttatgcaccataaccgc 88  Q
    ||||||||||| |||||||||||||||| |||||||||||||||||    
T  20120 gaatttatgcagggtgcataaggatttccttatgcaccataaccgc 20165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0516 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0516
Description:

Target: scaffold0516; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 45 - 88
Target Start/End: Original strand, 1250 - 1293
Alignment:
Q  45 atttatgcacggtgcataaggatttctttatgcaccataaccgc 88  Q
    ||||||||| |||||||||||||||| |||||||||||||||||    
T  1250 atttatgcagggtgcataaggatttccttatgcaccataaccgc 1293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0249 (Bit Score: 36; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0249
Description:

Target: scaffold0249; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 45 - 88
Target Start/End: Complemental strand, 23586 - 23543
Alignment:
Q  45 atttatgcacggtgcataaggatttctttatgcaccataaccgc 88  Q
    ||||||||| |||||||||||||||| |||||||||||||||||    
T  23586 atttatgcagggtgcataaggatttccttatgcaccataaccgc 23543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0249; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 45 - 84
Target Start/End: Original strand, 23737 - 23776
Alignment:
Q  45 atttatgcacggtgcataaggatttctttatgcaccataa 84  Q
    ||||||||| |||||||||||||||| |||||||||||||    
T  23737 atttatgcagggtgcataaggatttccttatgcaccataa 23776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0238 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0238
Description:

Target: scaffold0238; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 46 - 85
Target Start/End: Original strand, 25251 - 25290
Alignment:
Q  46 tttatgcacggtgcataaggatttctttatgcaccataac 85  Q
    ||||||||||||||||||||||||| ||||||||||||||    
T  25251 tttatgcacggtgcataaggatttccttatgcaccataac 25290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0194 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0194
Description:

Target: scaffold0194; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 45 - 92
Target Start/End: Original strand, 28677 - 28724
Alignment:
Q  45 atttatgcacggtgcataaggatttctttatgcaccataaccgctccc 92  Q
    ||||| |||||||||| ||||||||| |||||||||||||||||||||    
T  28677 atttaagcacggtgcaaaaggatttccttatgcaccataaccgctccc 28724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 34; Significance: 0.0000000003; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 45 - 90
Target Start/End: Complemental strand, 202954 - 202909
Alignment:
Q  45 atttatgcacggtgcataaggatttctttatgcaccataaccgctc 90  Q
    |||| |||||||||||||| |||||| |||||||||||||||||||    
T  202954 atttgtgcacggtgcataatgatttccttatgcaccataaccgctc 202909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 45 - 84
Target Start/End: Complemental strand, 51947 - 51908
Alignment:
Q  45 atttatgcacggtgcataaggatttctttatgcaccataa 84  Q
    ||||||||| |||||||||||||||| |||||||||||||    
T  51947 atttatgcagggtgcataaggatttccttatgcaccataa 51908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 44 - 88
Target Start/End: Original strand, 72703 - 72747
Alignment:
Q  44 aatttatgcacggtgcataaggatttctttatgcaccataaccgc 88  Q
    ||||||||||  ||||||||||||||| |||||||||||||||||    
T  72703 aatttatgcagagtgcataaggatttcgttatgcaccataaccgc 72747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0544 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0544
Description:

Target: scaffold0544; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 46 - 85
Target Start/End: Original strand, 10694 - 10733
Alignment:
Q  46 tttatgcacggtgcataaggatttctttatgcaccataac 85  Q
    ||||||||||||| ||||||||||| ||||||||||||||    
T  10694 tttatgcacggtgtataaggatttccttatgcaccataac 10733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0097 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0097
Description:

Target: scaffold0097; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 46 - 85
Target Start/End: Complemental strand, 13659 - 13620
Alignment:
Q  46 tttatgcacggtgcataaggatttctttatgcaccataac 85  Q
    ||||||||||||| ||||||||||| ||||||||||||||    
T  13659 tttatgcacggtggataaggatttccttatgcaccataac 13620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 47 - 86
Target Start/End: Complemental strand, 21017 - 20978
Alignment:
Q  47 ttatgcacggtgcataaggatttctttatgcaccataacc 86  Q
    |||||||||||||||||||||||  |||||||||||||||    
T  21017 ttatgcacggtgcataaggattttcttatgcaccataacc 20978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0189 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0189
Description:

Target: scaffold0189; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 47 - 85
Target Start/End: Original strand, 11210 - 11248
Alignment:
Q  47 ttatgcacggtgcataaggatttctttatgcaccataac 85  Q
    |||||||| ||||||||||||||| ||||||||||||||    
T  11210 ttatgcacagtgcataaggatttccttatgcaccataac 11248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0221 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0221
Description:

Target: scaffold0221; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 47 - 92
Target Start/End: Complemental strand, 20524 - 20479
Alignment:
Q  47 ttatgcacggtgcataaggatttctttatgcaccataaccgctccc 92  Q
    ||||||||||||||||||||  || ||||||||||||||| |||||    
T  20524 ttatgcacggtgcataaggaaatccttatgcaccataaccactccc 20479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 43 - 88
Target Start/End: Original strand, 80867 - 80912
Alignment:
Q  43 gaatttatgcacggtgcataaggatttctttatgcaccataaccgc 88  Q
    |||||| |||| |||||||||||||||  |||||||||||||||||    
T  80867 gaatttttgcagggtgcataaggattttcttatgcaccataaccgc 80912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 85
Target Start/End: Complemental strand, 96041 - 96001
Alignment:
Q  45 atttatgcacggtgcataaggatttctttatgcaccataac 85  Q
    ||||||||| |||||||||||||||  ||||||||||||||    
T  96041 atttatgcagggtgcataaggattttcttatgcaccataac 96001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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