View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4297_high_18 (Length: 256)
Name: NF4297_high_18
Description: NF4297
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4297_high_18 |
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Alignment Details
Target: chr2 (Bit Score: 241; Significance: 1e-133; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 241; E-Value: 1e-133
Query Start/End: Original strand, 1 - 245
Target Start/End: Original strand, 659404 - 659648
Alignment:
| Q |
1 |
attacaattaggctaaaatttaatactcctacaacaaccatcattaattaatcattattaaggctaagacattttccggggcggattagattattcaaaa |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
659404 |
attacaattaggctaaaatttaatactcctacaacaaccatcattagttaatcattattaaggctaagacattttccggggcggattagattattcaaaa |
659503 |
T |
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| Q |
101 |
tcaacacctgaatagttggtctaacacatatcaaagttatcaaacttaggttcaaattaggccctaatgtttagcctatcccagaataagaatttggaaa |
200 |
Q |
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| T |
659504 |
tcaacacctgaatagttggtctaacacatatcaaagttatcaaacttaggttcaaattaggccctaatgtttagcctatcccagaataagaatttggaaa |
659603 |
T |
|
| Q |
201 |
aatgaataagtataatcaatccctcacgcatgtgttagagaaaga |
245 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
659604 |
aatgaataagtataatcaatccctcacgcatgtgttagagaaaga |
659648 |
T |
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