View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4297_high_7 (Length: 362)
Name: NF4297_high_7
Description: NF4297
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4297_high_7 |
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Alignment Details
Target: chr4 (Bit Score: 323; Significance: 0; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 323; E-Value: 0
Query Start/End: Original strand, 15 - 341
Target Start/End: Complemental strand, 36768012 - 36767686
Alignment:
| Q |
15 |
tcatcagagggtttcctgatcaggtaagatatatatagttcttgcaaatagtttttctctgaacttactatcattcatactttggcagtgactaattttg |
114 |
Q |
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| T |
36768012 |
tcatcagagggtttcctgatcaggtaagatatatatagttcttgcaaatagtttttctctgaacttactatcattcatactttggcagtgactaattttg |
36767913 |
T |
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| Q |
115 |
gaagcatcaaatatttggttagaaaataagacaagtatctaataataaagcagtgaaataatctaataaagccacaaggaaaatgtatgaaatttccatg |
214 |
Q |
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| T |
36767912 |
gaagcatcaaatatttgattagaaaataagacaagtatctaataataaagcagtgaaataatctaataaagccacaaggaaaatgtatgaaatttccatg |
36767813 |
T |
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| Q |
215 |
aacattgtgaaaacatgtatttgatcttgcaggaaatgatggaggatcctttacttcttcatcatcagtggcatttgagctctatcaatgagtctaactc |
314 |
Q |
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| T |
36767812 |
aacattgtgaaaacatgtatttgatcttgcaggaaatgatggaggatcctttacttcttcatcatcagtggcatttgagctctatcaatgagtctaactc |
36767713 |
T |
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| Q |
315 |
actgccaataggttctgcttttggtga |
341 |
Q |
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| T |
36767712 |
actgccaataggttctgcttttggtga |
36767686 |
T |
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