View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4297_low_12 (Length: 353)
Name: NF4297_low_12
Description: NF4297
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4297_low_12 |
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Alignment Details
Target: chr8 (Bit Score: 329; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 329; E-Value: 0
Query Start/End: Original strand, 7 - 343
Target Start/End: Complemental strand, 7869440 - 7869105
Alignment:
| Q |
7 |
gtatcattagtgtttgtttggagcaaagattctccaacatacaatgacaaatagattttgttctgactattttaagaaagtttgatttgaacatacataa |
106 |
Q |
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| T |
7869440 |
gtatcattagtgtttgtttggagcaaagattctccaacataca-tgacaaatagattttgttctgactattttaagaaagtttgatttgaacatacataa |
7869342 |
T |
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| Q |
107 |
gtcactaaaaagatctatgcaaacattatcctctaaatagaaatgtgctgaaattgttaaaactagtcttaaactaattaactatgccaaagccggccat |
206 |
Q |
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| T |
7869341 |
gtcactaaaaagatctatgcaaacattatcctctaaatagaaatgtgctgaaattgttaaaactagtcttaaactaattaactatgccaaagccggccat |
7869242 |
T |
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| Q |
207 |
atagcatcacatgccgtccatgtactacaacaatgttagtctcaatatattatacaaatattctcatacaaaccattaaattagaccaatctctatgtac |
306 |
Q |
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| T |
7869241 |
atagcatcacatgccgtccatgtactacaacaatgttagtctcaatatattatacaaatattctcatacaaaccattaaattagaccaatctctatgtac |
7869142 |
T |
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| Q |
307 |
actaatcacaaagttgaacattttatcactttctgtg |
343 |
Q |
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| T |
7869141 |
actaatcacaaagttgaacattttatcactttctgtg |
7869105 |
T |
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