View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4297_low_6 (Length: 426)

Name: NF4297_low_6
Description: NF4297
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4297_low_6
NF4297_low_6
[»] chr1 (36 HSPs)
chr1 (19-416)||(46693262-46693658)
chr1 (95-389)||(19597911-19598207)
chr1 (19-92)||(16451783-16451856)
chr1 (19-92)||(16460936-16461009)
chr1 (19-91)||(20054387-20054459)
chr1 (19-91)||(20054843-20054915)
chr1 (19-91)||(20055299-20055371)
chr1 (19-91)||(20055755-20055827)
chr1 (19-91)||(20056211-20056283)
chr1 (19-91)||(20056667-20056739)
chr1 (19-91)||(20057114-20057186)
chr1 (19-91)||(20057570-20057642)
chr1 (19-91)||(35759915-35759987)
chr1 (19-91)||(50002926-50002998)
chr1 (19-92)||(52250429-52250502)
chr1 (19-92)||(52250766-52250839)
chr1 (19-92)||(52251103-52251176)
chr1 (19-91)||(20053931-20054003)
chr1 (19-91)||(20845512-20845584)
chr1 (19-91)||(38341129-38341201)
chr1 (19-91)||(20060191-20060263)
chr1 (19-91)||(35759459-35759531)
chr1 (19-91)||(49996531-49996603)
chr1 (19-91)||(50002558-50002630)
chr1 (19-91)||(31822970-31823042)
chr1 (98-249)||(24450400-24450551)
chr1 (25-84)||(51372732-51372791)
chr1 (14-85)||(28181350-28181421)
chr1 (19-91)||(39582564-39582636)
chr1 (19-92)||(35009858-35009931)
chr1 (324-389)||(50589796-50589861)
chr1 (31-91)||(16907470-16907530)
chr1 (19-91)||(43056916-43056988)
chr1 (148-185)||(31586299-31586336)
chr1 (132-184)||(41919892-41919944)
chr1 (219-247)||(50589938-50589966)
[»] chr8 (36 HSPs)
chr8 (93-415)||(37987303-37987621)
chr8 (19-93)||(22548398-22548472)
chr8 (19-92)||(22026603-22026676)
chr8 (19-91)||(32292164-32292236)
chr8 (19-91)||(34308330-34308402)
chr8 (19-91)||(34308786-34308858)
chr8 (19-91)||(22548846-22548918)
chr8 (19-91)||(21315961-21316033)
chr8 (19-91)||(27022190-27022262)
chr8 (30-91)||(12827105-12827166)
chr8 (19-91)||(17103305-17103377)
chr8 (19-91)||(25147759-25147830)
chr8 (19-91)||(25148189-25148261)
chr8 (19-75)||(41658972-41659028)
chr8 (19-88)||(12100913-12100982)
chr8 (19-91)||(9251108-9251180)
chr8 (19-91)||(10844466-10844538)
chr8 (19-91)||(32292620-32292699)
chr8 (19-91)||(27926121-27926193)
chr8 (19-91)||(31283503-31283575)
chr8 (28-91)||(27021840-27021903)
chr8 (23-89)||(6466483-6466549)
chr8 (19-91)||(2044281-2044353)
chr8 (19-91)||(8080194-8080265)
chr8 (19-86)||(28453561-28453628)
chr8 (27-74)||(29117467-29117514)
chr8 (24-74)||(25307992-25308042)
chr8 (13-54)||(3744855-3744896)
chr8 (19-91)||(6463394-6463467)
chr8 (28-89)||(17444235-17444296)
chr8 (27-66)||(15818892-15818931)
chr8 (19-66)||(22840425-22840472)
chr8 (19-66)||(30527358-30527405)
chr8 (27-85)||(27819105-27819162)
chr8 (30-66)||(6466940-6466976)
chr8 (132-184)||(34389612-34389664)
[»] chr7 (40 HSPs)
chr7 (95-416)||(10243505-10243825)
chr7 (19-91)||(2193479-2193551)
chr7 (19-91)||(7646329-7646401)
chr7 (19-91)||(9125182-9125254)
chr7 (19-91)||(28495470-28495542)
chr7 (19-91)||(36422474-36422546)
chr7 (8-91)||(2941608-2941691)
chr7 (19-83)||(13122363-13122427)
chr7 (19-83)||(13124994-13125058)
chr7 (19-91)||(28496077-28496149)
chr7 (19-91)||(43233180-43233252)
chr7 (19-90)||(2189367-2189438)
chr7 (19-91)||(18833509-18833581)
chr7 (32-91)||(43776321-43776380)
chr7 (19-91)||(29038871-29038943)
chr7 (19-73)||(42515767-42515821)
chr7 (19-92)||(6747456-6747529)
chr7 (19-91)||(6718926-6718998)
chr7 (19-91)||(7646638-7646710)
chr7 (19-91)||(42515315-42515387)
chr7 (19-92)||(36422605-36422678)
chr7 (19-91)||(6747927-6747999)
chr7 (19-91)||(34405442-34405514)
chr7 (19-73)||(26419104-26419158)
chr7 (95-196)||(37792704-37792805)
chr7 (8-91)||(3305199-3305282)
chr7 (19-72)||(11372666-11372719)
chr7 (46-91)||(18833633-18833678)
chr7 (19-91)||(2466147-2466218)
chr7 (19-91)||(2611510-2611582)
chr7 (23-91)||(31743740-31743808)
chr7 (19-54)||(43776178-43776213)
chr7 (19-92)||(25182584-25182657)
chr7 (19-89)||(31406440-31406512)
chr7 (19-91)||(680040-680111)
chr7 (19-91)||(22529086-22529158)
chr7 (19-66)||(7461258-7461305)
chr7 (123-185)||(1320125-1320187)
chr7 (8-57)||(29357341-29357390)
chr7 (19-91)||(36015320-36015392)
[»] chr5 (37 HSPs)
chr5 (93-416)||(697677-697999)
chr5 (95-370)||(27712373-27712650)
chr5 (19-92)||(8641885-8641958)
chr5 (94-333)||(22687082-22687323)
chr5 (19-91)||(3886452-3886524)
chr5 (19-91)||(3886908-3886980)
chr5 (19-91)||(34371835-34371907)
chr5 (19-91)||(2474628-2474700)
chr5 (19-90)||(2474172-2474243)
chr5 (19-89)||(21883938-21884008)
chr5 (19-92)||(15512862-15512935)
chr5 (19-91)||(189291-189363)
chr5 (19-91)||(2194027-2194099)
chr5 (19-91)||(42788497-42788569)
chr5 (19-92)||(34868001-34868074)
chr5 (19-91)||(30684862-30684934)
chr5 (19-91)||(34372291-34372363)
chr5 (19-91)||(17445306-17445378)
chr5 (19-91)||(30720111-30720183)
chr5 (19-91)||(22557192-22557265)
chr5 (19-91)||(20858393-20858465)
chr5 (19-91)||(29679959-29680030)
chr5 (19-91)||(22556759-22556832)
chr5 (19-91)||(1822129-1822201)
chr5 (19-74)||(24182114-24182169)
chr5 (19-89)||(10927256-10927326)
chr5 (25-78)||(11757145-11757198)
chr5 (19-92)||(18750046-18750119)
chr5 (8-92)||(39147144-39147228)
chr5 (19-61)||(8391203-8391245)
chr5 (293-369)||(8730433-8730508)
chr5 (19-50)||(1880299-1880330)
chr5 (8-91)||(30719656-30719739)
chr5 (19-48)||(187781-187810)
chr5 (28-92)||(2058507-2058572)
chr5 (19-91)||(27646685-27646758)
chr5 (19-91)||(20039327-20039398)
[»] chr4 (56 HSPs)
chr4 (225-389)||(28966293-28966458)
chr4 (8-91)||(35477872-35477955)
chr4 (19-91)||(15268018-15268090)
chr4 (19-91)||(24629281-24629353)
chr4 (19-92)||(4127262-4127335)
chr4 (131-370)||(38929124-38929364)
chr4 (19-91)||(7678467-7678539)
chr4 (15-91)||(13265855-13265931)
chr4 (19-91)||(23350128-23350200)
chr4 (19-91)||(50398839-50398911)
chr4 (95-263)||(8254354-8254523)
chr4 (95-263)||(8267772-8267941)
chr4 (19-92)||(49998859-49998932)
chr4 (26-91)||(50399334-50399399)
chr4 (31-95)||(50398379-50398443)
chr4 (8-91)||(13266298-13266381)
chr4 (19-76)||(35871850-35871907)
chr4 (19-79)||(14571545-14571605)
chr4 (19-83)||(14572007-14572071)
chr4 (19-91)||(4127739-4127806)
chr4 (19-91)||(23943087-23943159)
chr4 (19-91)||(5810057-5810129)
chr4 (19-91)||(7381490-7381562)
chr4 (19-91)||(27578134-27578203)
chr4 (140-253)||(46699459-46699572)
chr4 (19-92)||(1645593-1645666)
chr4 (21-89)||(1464372-1464439)
chr4 (19-66)||(4414257-4414304)
chr4 (46-92)||(10668887-10668933)
chr4 (46-92)||(10882526-10882572)
chr4 (46-91)||(10668381-10668426)
chr4 (19-76)||(27578317-27578374)
chr4 (31-92)||(51331127-51331188)
chr4 (19-59)||(8467690-8467730)
chr4 (34-86)||(8861929-8861981)
chr4 (34-86)||(8864802-8864854)
chr4 (19-91)||(21067505-21067577)
chr4 (19-91)||(31816983-31817055)
chr4 (34-82)||(31817707-31817755)
chr4 (19-91)||(44470720-44470792)
chr4 (19-73)||(17628734-17628788)
chr4 (21-75)||(41870143-41870197)
chr4 (19-92)||(3169429-3169502)
chr4 (26-91)||(21220199-21220264)
chr4 (128-185)||(31051249-31051306)
chr4 (13-74)||(33294754-33294815)
chr4 (19-92)||(40607154-40607227)
chr4 (19-59)||(27026725-27026765)
chr4 (19-91)||(44471170-44471242)
chr4 (19-59)||(53996007-53996047)
chr4 (26-91)||(14352025-14352090)
chr4 (19-87)||(23091358-23091427)
chr4 (19-60)||(23976094-23976135)
chr4 (19-91)||(9423703-9423775)
chr4 (19-91)||(21067954-21068026)
chr4 (19-91)||(29628499-29628571)
[»] chr3 (43 HSPs)
chr3 (19-93)||(14820377-14820451)
chr3 (24-91)||(16811607-16811674)
chr3 (19-91)||(14814172-14814244)
chr3 (19-91)||(50347969-50348041)
chr3 (19-89)||(11179887-11179957)
chr3 (19-88)||(13149953-13150022)
chr3 (19-92)||(31284126-31284199)
chr3 (19-91)||(8067503-8067575)
chr3 (19-91)||(13150405-13150477)
chr3 (19-91)||(39653387-39653459)
chr3 (19-92)||(32227071-32227144)
chr3 (19-91)||(16811148-16811220)
chr3 (19-83)||(27187188-27187252)
chr3 (19-91)||(28561968-28562040)
chr3 (19-81)||(32386595-32386657)
chr3 (19-91)||(32227723-32227795)
chr3 (19-91)||(41473764-41473836)
chr3 (19-91)||(37045255-37045327)
chr3 (19-92)||(20884967-20885040)
chr3 (95-249)||(45163307-45163461)
chr3 (30-91)||(25248346-25248407)
chr3 (128-192)||(17501824-17501888)
chr3 (19-91)||(25230948-25231020)
chr3 (19-91)||(25238535-25238607)
chr3 (19-91)||(25238978-25239050)
chr3 (8-91)||(18318867-18318950)
chr3 (19-93)||(4067210-4067283)
chr3 (8-91)||(7477403-7477486)
chr3 (8-91)||(7494093-7494176)
chr3 (19-60)||(25230587-25230628)
chr3 (19-60)||(25238174-25238215)
chr3 (19-92)||(30477273-30477345)
chr3 (97-185)||(1653514-1653602)
chr3 (19-91)||(2911307-2911379)
chr3 (19-91)||(3900023-3900095)
chr3 (13-65)||(26436265-26436316)
chr3 (19-91)||(30529909-30529981)
chr3 (19-79)||(36763810-36763870)
chr3 (34-91)||(18547418-18547475)
chr3 (19-60)||(25802430-25802471)
chr3 (19-91)||(25230099-25230171)
chr3 (19-91)||(25237686-25237758)
chr3 (19-71)||(53150683-53150735)
[»] scaffold0322 (1 HSPs)
scaffold0322 (19-91)||(19189-19261)
[»] chr6 (36 HSPs)
chr6 (19-91)||(17027382-17027454)
chr6 (19-91)||(7912101-7912173)
chr6 (19-91)||(9352285-9352357)
chr6 (19-91)||(20850544-20850616)
chr6 (19-91)||(23776663-23776735)
chr6 (19-91)||(2681071-2681143)
chr6 (19-91)||(13492556-13492628)
chr6 (19-91)||(20896538-20896610)
chr6 (8-91)||(23986168-23986251)
chr6 (19-88)||(7912533-7912602)
chr6 (19-91)||(9440708-9440780)
chr6 (27-91)||(13191364-13191428)
chr6 (19-91)||(6331219-6331291)
chr6 (19-91)||(13493013-13493085)
chr6 (28-91)||(28780342-28780405)
chr6 (19-91)||(15929362-15929434)
chr6 (19-91)||(17730960-17731032)
chr6 (19-93)||(27334316-27334390)
chr6 (19-93)||(27395056-27395130)
chr6 (19-66)||(2891170-2891217)
chr6 (19-89)||(3653121-3653191)
chr6 (27-81)||(28583195-28583249)
chr6 (19-91)||(20126033-20126105)
chr6 (19-91)||(21311738-21311810)
chr6 (19-91)||(21312194-21312266)
chr6 (19-66)||(2890715-2890762)
chr6 (19-78)||(20735918-20735977)
chr6 (19-66)||(31415965-31416011)
chr6 (8-66)||(2720439-2720497)
chr6 (26-91)||(21312468-21312533)
chr6 (39-91)||(20732820-20732872)
chr6 (19-69)||(11062052-11062102)
chr6 (19-89)||(21557351-21557421)
chr6 (26-91)||(3652753-3652818)
chr6 (29-66)||(17851151-17851188)
chr6 (32-92)||(31821642-31821702)
[»] chr2 (36 HSPs)
chr2 (19-91)||(32377758-32377830)
chr2 (19-89)||(30966457-30966527)
chr2 (19-91)||(30966913-30966985)
chr2 (19-91)||(25337848-25337920)
chr2 (19-91)||(33175179-33175251)
chr2 (8-91)||(5399668-5399751)
chr2 (20-91)||(29804871-29804942)
chr2 (92-247)||(2062212-2062368)
chr2 (19-91)||(24818548-24818620)
chr2 (19-83)||(32377575-32377639)
chr2 (19-91)||(33771224-33771296)
chr2 (19-91)||(1912747-1912819)
chr2 (19-91)||(15639957-15640029)
chr2 (19-91)||(25433907-25433979)
chr2 (19-91)||(30963114-30963186)
chr2 (19-90)||(20502187-20502258)
chr2 (19-91)||(16379160-16379232)
chr2 (21-87)||(1952926-1952992)
chr2 (8-74)||(11389695-11389761)
chr2 (8-74)||(11406356-11406422)
chr2 (132-185)||(31902982-31903035)
chr2 (19-91)||(83240-83312)
chr2 (19-91)||(16379616-16379688)
chr2 (324-381)||(27739352-27739409)
chr2 (19-80)||(30961745-30961806)
chr2 (19-92)||(37552788-37552861)
chr2 (19-91)||(1707264-1707336)
chr2 (19-91)||(13191197-13191269)
chr2 (293-369)||(25505399-25505474)
chr2 (19-58)||(29259504-29259543)
chr2 (19-91)||(30963569-30963643)
chr2 (19-49)||(8181254-8181284)
chr2 (26-76)||(26865119-26865169)
chr2 (144-185)||(16959313-16959354)
chr2 (19-64)||(36924359-36924404)
chr2 (138-198)||(29486399-29486459)
[»] scaffold0389 (1 HSPs)
scaffold0389 (19-91)||(13384-13456)
[»] scaffold0243 (1 HSPs)
scaffold0243 (19-91)||(1443-1515)
[»] scaffold0022 (5 HSPs)
scaffold0022 (19-91)||(162985-163057)
scaffold0022 (19-88)||(162531-162601)
scaffold0022 (23-92)||(69665-69734)
scaffold0022 (19-91)||(163294-163366)
scaffold0022 (40-91)||(162483-162534)
[»] scaffold0002 (2 HSPs)
scaffold0002 (19-88)||(154980-155049)
scaffold0002 (19-91)||(154525-154597)
[»] scaffold1519 (1 HSPs)
scaffold1519 (19-91)||(1552-1624)
[»] scaffold0217 (1 HSPs)
scaffold0217 (19-91)||(533-605)
[»] scaffold0168 (1 HSPs)
scaffold0168 (19-91)||(2965-3037)
[»] scaffold0020 (1 HSPs)
scaffold0020 (19-91)||(107314-107386)
[»] scaffold0277 (1 HSPs)
scaffold0277 (19-91)||(14553-14625)
[»] scaffold0024 (1 HSPs)
scaffold0024 (19-91)||(105943-106015)
[»] scaffold0018 (1 HSPs)
scaffold0018 (19-91)||(10522-10594)
[»] scaffold0557 (1 HSPs)
scaffold0557 (8-91)||(2308-2391)
[»] scaffold0065 (2 HSPs)
scaffold0065 (19-81)||(62968-63030)
scaffold0065 (19-91)||(67214-67286)
[»] scaffold0005 (2 HSPs)
scaffold0005 (19-83)||(245305-245369)
scaffold0005 (19-79)||(245771-245831)
[»] scaffold0442 (1 HSPs)
scaffold0442 (22-89)||(1-68)
[»] scaffold0040 (1 HSPs)
scaffold0040 (19-93)||(2059-2133)
[»] scaffold0499 (1 HSPs)
scaffold0499 (19-91)||(1902-1974)
[»] scaffold0333 (3 HSPs)
scaffold0333 (19-91)||(5243-5315)
scaffold0333 (19-91)||(4783-4855)
scaffold0333 (19-91)||(5346-5418)
[»] scaffold0047 (2 HSPs)
scaffold0047 (19-91)||(17449-17521)
scaffold0047 (21-91)||(17987-18056)
[»] scaffold0036 (2 HSPs)
scaffold0036 (8-68)||(26280-26340)
scaffold0036 (31-73)||(16279-16321)


Alignment Details
Target: chr1 (Bit Score: 322; Significance: 0; HSPs: 36)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 322; E-Value: 0
Query Start/End: Original strand, 19 - 416
Target Start/End: Complemental strand, 46693658 - 46693262
Alignment:
Q  19 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgggatgttacatcggacgccttctccttctcaccggcg 118  Q
    |||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||| |||||||||||| ||||||||||||||||||||||||||    
T  46693658 aaaacacgctgaaaagacccgtgttggtttgtggggtcagtcgacaatcctgaaagcagtttgggatgttacaccggacgccttctccttctcaccggcg 46693559  T
Q  119 ggtgcctgcttacgatctaggttgagtttccgcttcagaccggcgtcattgcccgtgttttgttgttagttttcatctcctttgggtctgtgtttaggtc 218  Q
    |||| ||| ||||||| ||||||||||||||||||||||||||||||  |||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  46693558 ggtgtctgtttacgatttaggttgagtttccgcttcagaccggcgtcgctgcccgtgttctgttgttagttttcatctcctttgggtctgtgtttaggtc 46693459  T
Q  219 gatgcctgtttcttggtgaggtggtttggaggcgttgtccttgtctcttttgttggtttgagggttattctctatggttgcttctttagaatgctttggg 318  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||| ||||||||||||    
T  46693458 gatgcctgtttcttggcgaggtggtttggaggcgttgtccttgtctcttttgttggtttgagggttattctatgtggttgcttctttggaatgctttggg 46693359  T
Q  319 gatgcttgctgctttccttggtgactttcaaccttgttgtcttgcgcttgtgtctgttgatccgtggtgttaggtttgtgtggtgggggtgatgatgt 416  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||| ||||||| ||||||||||||||||||||||||||    
T  46693358 gatgcttgctgctttccttggtgactttcaaccttgttgtcttacgcttgtgtctgctgatccatggtgtt-ggtttgtgtggtgggggtgatgatgt 46693262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 95 - 389
Target Start/End: Original strand, 19597911 - 19598207
Alignment:
Q  95 gacgccttctccttctcaccggcgggtgcctgcttacgatctaggttgagtttccgcttcagaccggcgtcattgcccgtgttttgttgttagttttcat 194  Q
    |||||||||||||| | |||| ||| || ||| ||||||||||||||| |||||| ||||||||||||||| ||||||||||| ||||||| | ||||||    
T  19597911 gacgccttctccttgttaccgacggatgtctgtttacgatctaggttgtgtttccacttcagaccggcgtcgttgcccgtgttctgttgttgggtttcat 19598010  T
Q  195 c-tcctttgggtctgtgtttaggtcgatgcctgtttcttggtgaggtggtttggaggcgttgtccttgtctcttttgttggtttgagggt-tattctcta 292  Q
    | |||||| ||| ||||||| ||| | |||||||||||||| |||||||||||||||||| | | |||||||||| | ||||||| | || |||||| |     
T  19598011 cttccttttggtttgtgtttgggttgctgcctgtttcttggcgaggtggtttggaggcgtagcctttgtctctttcgatggtttgtgagtatattctttg 19598110  T
Q  293 tggttgcttctttagaatgctttggggatgcttgctgctttccttggtgactttcaaccttgttgtcttgcgcttgtgtctgttgatccgtggtgtt 389  Q
    |||||| ||||| |||||||| ||| |||| |||||||||||||||| ||| || ||||| |||||||||| |||||||||||||| | ||||||||    
T  19598111 tggttgattcttcagaatgctatggtgatgtttgctgctttccttggagacattaaacctcgttgtcttgctcttgtgtctgttgaacagtggtgtt 19598207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 19 - 92
Target Start/End: Complemental strand, 16451856 - 16451783
Alignment:
Q  19 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgggatgttacat 92  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16451856 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgggatgttacat 16451783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 19 - 92
Target Start/End: Complemental strand, 16461009 - 16460936
Alignment:
Q  19 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgggatgttacat 92  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16461009 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgggatgttacat 16460936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 19 - 91
Target Start/End: Complemental strand, 20054459 - 20054387
Alignment:
Q  19 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgggatgttaca 91  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20054459 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgggatgttaca 20054387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 19 - 91
Target Start/End: Complemental strand, 20054915 - 20054843
Alignment:
Q  19 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgggatgttaca 91  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20054915 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgggatgttaca 20054843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 19 - 91
Target Start/End: Complemental strand, 20055371 - 20055299
Alignment:
Q  19 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgggatgttaca 91  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20055371 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgggatgttaca 20055299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 19 - 91
Target Start/End: Complemental strand, 20055827 - 20055755
Alignment:
Q  19 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgggatgttaca 91  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20055827 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgggatgttaca 20055755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 19 - 91
Target Start/End: Complemental strand, 20056283 - 20056211
Alignment:
Q  19 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgggatgttaca 91  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20056283 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgggatgttaca 20056211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 19 - 91
Target Start/End: Complemental strand, 20056739 - 20056667
Alignment:
Q  19 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgggatgttaca 91  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20056739 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgggatgttaca 20056667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 19 - 91
Target Start/End: Complemental strand, 20057186 - 20057114
Alignment:
Q  19 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgggatgttaca 91  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20057186 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgggatgttaca 20057114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 19 - 91
Target Start/End: Complemental strand, 20057642 - 20057570
Alignment:
Q  19 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgggatgttaca 91  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20057642 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgggatgttaca 20057570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 19 - 91
Target Start/End: Complemental strand, 35759987 - 35759915
Alignment:
Q  19 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgggatgttaca 91  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  35759987 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcatgaaagcagtctgggatgttaca 35759915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 19 - 91
Target Start/End: Complemental strand, 50002998 - 50002926
Alignment:
Q  19 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgggatgttaca 91  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  50002998 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcagcaatcctgaaagcagtctgggatgttaca 50002926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 19 - 92
Target Start/End: Original strand, 52250429 - 52250502
Alignment:
Q  19 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgggatgttacat 92  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||    
T  52250429 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcgacaatgctgaaagcagtctgggatgttacat 52250502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 19 - 92
Target Start/End: Original strand, 52250766 - 52250839
Alignment:
Q  19 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgggatgttacat 92  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||    
T  52250766 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcgacaatgctgaaagcagtctgggatgttacat 52250839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 19 - 92
Target Start/End: Original strand, 52251103 - 52251176
Alignment:
Q  19 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgggatgttacat 92  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||    
T  52251103 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcgacaatgctgaaagcagtctgggatgttacat 52251176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 19 - 91
Target Start/End: Complemental strand, 20054003 - 20053931
Alignment:
Q  19 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgggatgttaca 91  Q
    |||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  20054003 aaaacatgctgaaaagactcgtgttggtttgtggggtcagtcgacaatcctgaaagcagtctgggatgttaca 20053931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 19 - 91
Target Start/End: Complemental strand, 20845584 - 20845512
Alignment:
Q  19 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgggatgttaca 91  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||    
T  20845584 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcttgaaagcagtctgagatgttaca 20845512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 19 - 91
Target Start/End: Original strand, 38341129 - 38341201
Alignment:
Q  19 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgggatgttaca 91  Q
    ||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  38341129 aaaacacgcggaaaagactcgtgttggtttatggggtcagtcggcaatcctgaaagcagtctgggatgttaca 38341201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 19 - 91
Target Start/End: Complemental strand, 20060263 - 20060191
Alignment:
Q  19 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgggatgttaca 91  Q
    |||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  20060263 aaaacacgatggaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctggggtgttaca 20060191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 19 - 91
Target Start/End: Complemental strand, 35759531 - 35759459
Alignment:
Q  19 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgggatgttaca 91  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||| |||||| |||||||| |||||||    
T  35759531 aaaacacgctgaaaagactcgtgttggtttttggggtcagtcggcaatcatgaaagtagtctggggtgttaca 35759459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 19 - 91
Target Start/End: Complemental strand, 49996603 - 49996531
Alignment:
Q  19 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgggatgttaca 91  Q
    |||||||||||||||||||| |||| ||||||||||||||||||||||||| ||||||||||| |||||||||    
T  49996603 aaaacacgctgaaaagactcttgttagtttgtggggtcagtcggcaatcctaaaagcagtctgagatgttaca 49996531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 19 - 91
Target Start/End: Complemental strand, 50002630 - 50002558
Alignment:
Q  19 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgggatgttaca 91  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||  |||| ||||||||||    
T  50002630 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcgacaatcctgaaagtcgtctaggatgttaca 50002558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 19 - 91
Target Start/End: Complemental strand, 31823042 - 31822970
Alignment:
Q  19 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgggatgttaca 91  Q
    |||||| ||||||||||||||||||| ||||||||||||||| ||||||| ||||||| ||||||||||||||    
T  31823042 aaaacatgctgaaaagactcgtgttgatttgtggggtcagtcagcaatccagaaagcattctgggatgttaca 31822970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 98 - 249
Target Start/End: Complemental strand, 24450551 - 24450400
Alignment:
Q  98 gccttctccttctcaccggcgggtgcctgcttacgatctaggttgagtttccgcttcagaccggcgtcattgcccgtgttttgttgttagttttcatct- 196  Q
    ||||||||||| |||||| | | |||||| |||||| |||||| | ||| |||||||| || | ||||  |||||||||||||||||| | ||||||||     
T  24450551 gccttctccttgtcaccgtcagatgcctgtttacgacctaggtagtgttcccgcttcaaactg-cgtcgctgcccgtgttttgttgttgggtttcatctt 24450453  T
Q  197 cctttgggtctgtgtttaggtcgatgcctgtttcttggtgaggtggtttggag 249  Q
    ||||| ||||||| ||| |||  |||| |||||||||||| ||||||||||||    
T  24450452 ccttttggtctgtatttgggttaatgcttgtttcttggtggggtggtttggag 24450400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 25 - 84
Target Start/End: Complemental strand, 51372791 - 51372732
Alignment:
Q  25 cgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctggga 84  Q
    ||||||||||||||||||||||||||||||||| ||||||||| |||||||||| |||||    
T  51372791 cgctgaaaagactcgtgttggtttgtggggtcaatcggcaatcttgaaagcagtatggga 51372732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 14 - 85
Target Start/End: Complemental strand, 28181421 - 28181350
Alignment:
Q  14 agaagaaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgggat 85  Q
    |||| ||||||| |||||||||||||||||||||||||| | |||| | |||||||||||||||| ||||||    
T  28181421 agaacaaaacactctgaaaagactcgtgttggtttgtggaggcagttgacaatcctgaaagcagtatgggat 28181350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 19 - 91
Target Start/End: Original strand, 39582564 - 39582636
Alignment:
Q  19 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgggatgttaca 91  Q
    |||||||||||| ||||||||| ||||||||| || |||||||||||| || |||| ||| ||||||||||||    
T  39582564 aaaacacgctgagaagactcgttttggtttgtaggatcagtcggcaatgcttaaagtagtttgggatgttaca 39582636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 19 - 92
Target Start/End: Complemental strand, 35009931 - 35009858
Alignment:
Q  19 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgggatgttacat 92  Q
    ||||||| ||||||| |||| |||| |||||| ||||||||||||||| || ||||  ||||||||||||||||    
T  35009931 aaaacacactgaaaaaactcatgttcgtttgtagggtcagtcggcaatgctcaaagtcgtctgggatgttacat 35009858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 324 - 389
Target Start/End: Complemental strand, 50589861 - 50589796
Alignment:
Q  324 ttgctgctttccttggtgactttcaaccttgttgtcttgcgcttgtgtctgttgatccgtggtgtt 389  Q
    |||||||||||||||  |||| |||||||||||||||||| ||||||  || ||||||||||||||    
T  50589861 ttgctgctttccttgaagactatcaaccttgttgtcttgctcttgtgcttgctgatccgtggtgtt 50589796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 31 - 91
Target Start/End: Original strand, 16907470 - 16907530
Alignment:
Q  31 aaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgggatgttaca 91  Q
    |||||||||||||||||||||||||||| |  ||||||| |||||||  ||||||||||||    
T  16907470 aaagactcgtgttggtttgtggggtcagccaacaatccttaaagcagcatgggatgttaca 16907530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 91
Target Start/End: Complemental strand, 43056988 - 43056916
Alignment:
Q  19 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgggatgttaca 91  Q
    ||||||| ||||||| ||| |||||||||||| |||||||||||||||  | ||||  ||| |||||||||||    
T  43056988 aaaacacactgaaaaaacttgtgttggtttgtagggtcagtcggcaattattaaagtcgtcggggatgttaca 43056916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 148 - 185
Target Start/End: Complemental strand, 31586336 - 31586299
Alignment:
Q  148 ccgcttcagaccggcgtcattgcccgtgttttgttgtt 185  Q
    ||||||||||||||||||  ||||||||||||||||||    
T  31586336 ccgcttcagaccggcgtcgctgcccgtgttttgttgtt 31586299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 132 - 184
Target Start/End: Original strand, 41919892 - 41919944
Alignment:
Q  132 gatctaggttgagtttccgcttcagaccggcgtcattgcccgtgttttgttgt 184  Q
    ||||| ||||| | |||||||||| ||| ||||| ||||||||||||||||||    
T  41919892 gatctgggttgtggttccgcttcaaaccagcgtcgttgcccgtgttttgttgt 41919944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 219 - 247
Target Start/End: Complemental strand, 50589966 - 50589938
Alignment:
Q  219 gatgcctgtttcttggtgaggtggtttgg 247  Q
    |||||||||||||||||||||||||||||    
T  50589966 gatgcctgtttcttggtgaggtggtttgg 50589938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 187; Significance: 1e-101; HSPs: 36)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 93 - 415
Target Start/End: Complemental strand, 37987621 - 37987303
Alignment:
Q  93 cggacgccttctccttctcaccggcgggtgcctgcttacgatctaggttgagtttccgcttcagaccggcgtcattgcccgtgttttgttgttagttttc 192  Q
    |||| ||||||||||| |||||||||||||| || ||||||||||||||||||||||||||||||||||||||  |||||||||| ||||||||| ||||    
T  37987621 cggaagccttctccttgtcaccggcgggtgcgtgtttacgatctaggttgagtttccgcttcagaccggcgtcgctgcccgtgttatgttgttaggtttc 37987522  T
Q  193 atctcctttgggtctgtgtttaggtcgatgcctgtttcttggtgaggtggtttggaggcgttgtccttgtctcttttgttggtttgagggttattctcta 292  Q
    ||||||| | | | |||||||| |||||||| |||||||||| |||||||||||||| |||| ||||||||||||||||||||||| |||||| |||||     
T  37987521 atctcctcttgttatgtgtttaagtcgatgcttgtttcttggcgaggtggtttggagtcgttatccttgtctcttttgttggtttgtgggttactctctg 37987422  T
Q  293 tggttgcttctttagaatgctttggggatgcttgctgctttccttggtgactttcaaccttgttgtcttgcgcttgtgtctgttgatccgtggtgttagg 392  Q
    |||||| ||| || |||||||||||||||| |||||||||||||||| ||||||||||||||||||||| |||||||||||| ||| |||||||||| ||    
T  37987421 tggttg-ttc-ttggaatgctttggggatgattgctgctttccttggagactttcaaccttgttgtctt-cgcttgtgtctgctgaaccgtggtgtt-gg 37987326  T
Q  393 tttgtgtggtgggggtgatgatg 415  Q
    ||||||||||||||| |||||||    
T  37987325 tttgtgtggtgggggagatgatg 37987303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 19 - 93
Target Start/End: Complemental strand, 22548472 - 22548398
Alignment:
Q  19 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgggatgttacatc 93  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  22548472 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtatgggatgttacatc 22548398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 19 - 92
Target Start/End: Original strand, 22026603 - 22026676
Alignment:
Q  19 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgggatgttacat 92  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22026603 aaaacacactgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgggatgttacat 22026676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 19 - 91
Target Start/End: Original strand, 32292164 - 32292236
Alignment:
Q  19 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgggatgttaca 91  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  32292164 aaaacacgctgaaaagactcgtgttggtttgtagggtcagtcggcaatcctgaaagcagtctgggatgttaca 32292236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 19 - 91
Target Start/End: Complemental strand, 34308402 - 34308330
Alignment:
Q  19 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgggatgttaca 91  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  34308402 aaaacacgctgaaaagactcgtgctggtttgtggggtcagtcggcaatcctgaaagcagtctgggatgttaca 34308330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 19 - 91
Target Start/End: Complemental strand, 34308858 - 34308786
Alignment:
Q  19 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgggatgttaca 91  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  34308858 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcagcaatcctgaaagcagtctgggatgttaca 34308786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 19 - 91
Target Start/End: Complemental strand, 22548918 - 22548846
Alignment:
Q  19 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgggatgttaca 91  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  22548918 aaaacacgctgaacagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtatgggatgttaca 22548846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 19 - 91
Target Start/End: Complemental strand, 21316033 - 21315961
Alignment:
Q  19 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgggatgttaca 91  Q
    ||||||||||||||||||||||||||||||||||||||| ||| ||||||| |||||||||||||||||||||    
T  21316033 aaaacacgctgaaaagactcgtgttggtttgtggggtcaatcgacaatcctaaaagcagtctgggatgttaca 21315961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 19 - 91
Target Start/End: Complemental strand, 27022262 - 27022190
Alignment:
Q  19 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgggatgttaca 91  Q
    |||||||||| |||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||    
T  27022262 aaaacacgctaaaaagactcgtgttggtttgtggggtcagtcgacaatcctaaaagcagtctgggatgttaca 27022190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 30 - 91
Target Start/End: Complemental strand, 12827166 - 12827105
Alignment:
Q  30 aaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgggatgttaca 91  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  12827166 aaaagactcgtgttggtttgtggggtcagtcgacaatcctgaaagcagtctgggatgttaca 12827105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 19 - 91
Target Start/End: Original strand, 17103305 - 17103377
Alignment:
Q  19 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgggatgttaca 91  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||  |||||||||||||||    
T  17103305 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcgacaatcctaaaagtcgtctgggatgttaca 17103377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 19 - 91
Target Start/End: Original strand, 25147759 - 25147830
Alignment:
Q  19 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgggatgttaca 91  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| || |||||||    
T  25147759 aaaacacgctgaaaagactcgtgttggtttgt-gggtcagtcggcaatcctgaaagcagtcttgggtgttaca 25147830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 19 - 91
Target Start/End: Original strand, 25148189 - 25148261
Alignment:
Q  19 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgggatgttaca 91  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||| || |||||||||    
T  25148189 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcgacaatcctaaaagcagtatgagatgttaca 25148261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 19 - 75
Target Start/End: Complemental strand, 41659028 - 41658972
Alignment:
Q  19 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagc 75  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  41659028 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatgctgaaagc 41658972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 19 - 88
Target Start/End: Original strand, 12100913 - 12100982
Alignment:
Q  19 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgggatgtt 88  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||| |||||||  || |||||||||    
T  12100913 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcgacaatgctgaaagtcgtatgggatgtt 12100982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 19 - 91
Target Start/End: Original strand, 9251108 - 9251180
Alignment:
Q  19 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgggatgttaca 91  Q
    ||||||||||||||| ||| ||||||||||||||||||| ||| ||||||||||||||||||  |||||||||    
T  9251108 aaaacacgctgaaaaaacttgtgttggtttgtggggtcaatcgacaatcctgaaagcagtctatgatgttaca 9251180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 19 - 91
Target Start/End: Complemental strand, 10844538 - 10844466
Alignment:
Q  19 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgggatgttaca 91  Q
    ||||||||||||||||||||||||| |||||| |||||||||| ||||||| ||||  |||||||||||||||    
T  10844538 aaaacacgctgaaaagactcgtgtttgtttgtagggtcagtcgacaatcctaaaagtcgtctgggatgttaca 10844466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 19 - 91
Target Start/End: Original strand, 32292620 - 32292699
Alignment:
Q  19 aaaacacgctgaaaagactcgtgttggtttgtg-------gggtcagtcggcaatcctgaaagcagtctgggatgttaca 91  Q
    ||||||||||||||||||||||||||||||||        |||||||||||||||||| |||||||||||||||||||||    
T  32292620 aaaacacgctgaaaagactcgtgttggtttgtactttgtagggtcagtcggcaatcctaaaagcagtctgggatgttaca 32292699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 19 - 91
Target Start/End: Original strand, 27926121 - 27926193
Alignment:
Q  19 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgggatgttaca 91  Q
    |||||| ||||||||||||||||||||||||| |||||||||| |||| || ||||  |||||||||||||||    
T  27926121 aaaacatgctgaaaagactcgtgttggtttgtagggtcagtcgacaatgcttaaagtcgtctgggatgttaca 27926193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 19 - 91
Target Start/End: Complemental strand, 31283575 - 31283503
Alignment:
Q  19 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgggatgttaca 91  Q
    ||||| || |||||||||||||||||||||||||||||||||| ||||  ||||||  |||||||||||||||    
T  31283575 aaaacgcgttgaaaagactcgtgttggtttgtggggtcagtcgacaatgttgaaagtcgtctgggatgttaca 31283503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 28 - 91
Target Start/End: Complemental strand, 27021903 - 27021840
Alignment:
Q  28 tgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgggatgttaca 91  Q
    ||||||||||||||||||||||||  |||||||||||||||||||| |||| || |||||||||    
T  27021903 tgaaaagactcgtgttggtttgtgaagtcagtcggcaatcctgaaaacagtatgagatgttaca 27021840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 23 - 89
Target Start/End: Original strand, 6466483 - 6466549
Alignment:
Q  23 cacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgggatgtta 89  Q
    |||||| |||||||| |||||||||||||||| ||||||||||| |||||||  |||||||||||||    
T  6466483 cacgctaaaaagacttgtgttggtttgtggggccagtcggcaatactgaaagtcgtctgggatgtta 6466549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 19 - 91
Target Start/End: Original strand, 2044281 - 2044353
Alignment:
Q  19 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgggatgttaca 91  Q
    |||||||||||||||||||||| ||||||||| |||||||||  |||| || ||||  || ||||||||||||    
T  2044281 aaaacacgctgaaaagactcgtattggtttgtagggtcagtcaccaatgcttaaagtcgtttgggatgttaca 2044353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 19 - 91
Target Start/End: Complemental strand, 8080265 - 8080194
Alignment:
Q  19 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgggatgttaca 91  Q
    |||||||||||||||||||||||||||||||| ||| |||||| |||| || ||||  |||| ||||||||||    
T  8080265 aaaacacgctgaaaagactcgtgttggtttgtagggccagtcgacaatgcttaaagtcgtct-ggatgttaca 8080194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 19 - 86
Target Start/End: Original strand, 28453561 - 28453628
Alignment:
Q  19 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgggatg 86  Q
    |||||| |||||||||| ||||||| ||||||  | ||||||| ||||||| ||||||||||||||||    
T  28453561 aaaacatgctgaaaagagtcgtgtttgtttgtaagatcagtcgacaatcctaaaagcagtctgggatg 28453628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 27 - 74
Target Start/End: Original strand, 29117467 - 29117514
Alignment:
Q  27 ctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaag 74  Q
    |||||||||||||||||||||||| ||||| ||||| |||||||||||    
T  29117467 ctgaaaagactcgtgttggtttgtagggtcggtcggtaatcctgaaag 29117514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 24 - 74
Target Start/End: Original strand, 25307992 - 25308042
Alignment:
Q  24 acgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaag 74  Q
    ||||||||||||||||||||| ||| |||| ||||||||||||||| ||||    
T  25307992 acgctgaaaagactcgtgttgatttatgggatcagtcggcaatcctaaaag 25308042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 13 - 54
Target Start/End: Original strand, 3744855 - 3744896
Alignment:
Q  13 gagaagaaaacacgctgaaaagactcgtgttggtttgtgggg 54  Q
    ||||| ||||||| ||||||||||||||||||||||||||||    
T  3744855 gagaacaaaacacactgaaaagactcgtgttggtttgtgggg 3744896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 19 - 91
Target Start/End: Complemental strand, 6463467 - 6463394
Alignment:
Q  19 aaaacacgctgaaaagactcgtgttgg-tttgtggggtcagtcggcaatcctgaaagcagtctgggatgttaca 91  Q
    ||||||||||||||||||||||||||| ||| | |||||||||| |||| || ||||  |||| ||||||||||    
T  6463467 aaaacacgctgaaaagactcgtgttggttttttagggtcagtcgacaatgcttaaagtcgtctaggatgttaca 6463394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 28 - 89
Target Start/End: Original strand, 17444235 - 17444296
Alignment:
Q  28 tgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgggatgtta 89  Q
    |||||||| |||| |||||||||||||| ||||| ||||| |||||||||| || |||||||    
T  17444235 tgaaaagattcgtattggtttgtggggttagtcgacaatcttgaaagcagtttgcgatgtta 17444296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 27 - 66
Target Start/End: Complemental strand, 15818931 - 15818892
Alignment:
Q  27 ctgaaaagactcgtgttggtttgtggggtcagtcggcaat 66  Q
    ||||||||||| |||||||||||||||| |||||||||||    
T  15818931 ctgaaaagacttgtgttggtttgtggggccagtcggcaat 15818892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 19 - 66
Target Start/End: Complemental strand, 22840472 - 22840425
Alignment:
Q  19 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaat 66  Q
    ||||||| ||||||||||||||||||||||||  ||||||||| ||||    
T  22840472 aaaacacactgaaaagactcgtgttggtttgtatggtcagtcgacaat 22840425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 19 - 66
Target Start/End: Complemental strand, 30527405 - 30527358
Alignment:
Q  19 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaat 66  Q
    |||||||||||||||||||||||||| ||||| || ||||||| ||||    
T  30527405 aaaacacgctgaaaagactcgtgttgatttgtaggatcagtcgacaat 30527358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 27 - 85
Target Start/End: Complemental strand, 27819162 - 27819105
Alignment:
Q  27 ctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgggat 85  Q
    |||||||||| ||||||| || ||||||||||||| ||||||| |||||||||| ||||    
T  27819162 ctgaaaagacccgtgttgatt-gtggggtcagtcgacaatcctaaaagcagtctaggat 27819105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 30 - 66
Target Start/End: Original strand, 6466940 - 6466976
Alignment:
Q  30 aaaagactcgtgttggtttgtggggtcagtcggcaat 66  Q
    |||| |||| |||||||||||||||||||||||||||    
T  6466940 aaaaaactcatgttggtttgtggggtcagtcggcaat 6466976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 132 - 184
Target Start/End: Complemental strand, 34389664 - 34389612
Alignment:
Q  132 gatctaggttgagtttccgcttcagaccggcgtcattgcccgtgttttgttgt 184  Q
    ||||| ||||| | |||||||||| |||||||||  |||||||||||||||||    
T  34389664 gatctgggttgtgcttccgcttcaaaccggcgtcgctgcccgtgttttgttgt 34389612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 182; Significance: 3e-98; HSPs: 40)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 182; E-Value: 3e-98
Query Start/End: Original strand, 95 - 416
Target Start/End: Original strand, 10243505 - 10243825
Alignment:
Q  95 gacgccttctccttctcaccggcgggtgcctgcttacgatctaggttgagtttccgcttcagaccggcgtcattgcccgtgttttgttgttagttttcat 194  Q
    |||||||||| ||  |||||| ||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||| | ||||||| ||||||    
T  10243505 gacgccttcttctcgtcaccgacgggtgcctgcttacgatctaggttgagtttccgcttcagaccagcgtcactgcccgtgttctattgttaggtttcat 10243604  T
Q  195 ctcctttgggtctgtgtttaggtcgatgcctgtttcttggtgaggtggtttggaggcgttgtccttgtctcttttgttggtttgagggttattctctatg 294  Q
    ||||||| |||||||||||| |||||||| |||||||||| |||||||||| ||||||   ||||||| ||||||||||||||| ||| | |||||| ||    
T  10243605 ctccttttggtctgtgtttaagtcgatgcttgtttcttggcgaggtggtttagaggcgaattccttgtatcttttgttggtttgtgggattttctctgtg 10243704  T
Q  295 gttgcttctttagaatgctttggggatgcttgctgctttccttggtgactttcaaccttgttgtcttgcgcttgtgtctgttgatccgtggtgttaggtt 394  Q
    ||| ||||||  |||||||||||| |||||||||||||||| ||| ||| |||||||||| ||||||||||||||||||  ||| |||||||||| ||||    
T  10243705 gtttcttcttcggaatgctttgggaatgcttgctgctttccgtggagaccttcaaccttgctgtcttgcgcttgtgtctactgaaccgtggtgtt-ggtt 10243803  T
Q  395 tgtgtggtgggggtgatgatgt 416  Q
    ||||||||||||||||||||||    
T  10243804 tgtgtggtgggggtgatgatgt 10243825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 19 - 91
Target Start/End: Original strand, 2193479 - 2193551
Alignment:
Q  19 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgggatgttaca 91  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||    
T  2193479 aaaacacgctgaaaagactcgtgttgatttgtggggtcagtcggcaatcctgaaagcagtctgagatgttaca 2193551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 19 - 91
Target Start/End: Complemental strand, 7646401 - 7646329
Alignment:
Q  19 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgggatgttaca 91  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||    
T  7646401 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcgacaatgctgaaagcagtctgggatgttaca 7646329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 19 - 91
Target Start/End: Original strand, 9125182 - 9125254
Alignment:
Q  19 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgggatgttaca 91  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  9125182 aaaacatgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctggggtgttaca 9125254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 19 - 91
Target Start/End: Complemental strand, 28495542 - 28495470
Alignment:
Q  19 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgggatgttaca 91  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  28495542 aaaacccgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgcgatgttaca 28495470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 19 - 91
Target Start/End: Original strand, 36422474 - 36422546
Alignment:
Q  19 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgggatgttaca 91  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||    
T  36422474 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcgacaatgctgaaagcagtctgggatgttaca 36422546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 8 - 91
Target Start/End: Complemental strand, 2941691 - 2941608
Alignment:
Q  8 cgagagagaagaaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgggatgttaca 91  Q
    |||| ||| ||||||||||||||||||||||||||||||||||| |||||||||||||||  ||||||||||||||||||||||    
T  2941691 cgagtgaggagaaaacacgctgaaaagactcgtgttggtttgtgcggtcagtcggcaatcacgaaagcagtctgggatgttaca 2941608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 19 - 83
Target Start/End: Complemental strand, 13122427 - 13122363
Alignment:
Q  19 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctggg 83  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  13122427 aaaacacgctgaaaagactcgtgttggtttgtggggtcaatcggcaatcctgaaagcagtctggg 13122363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 19 - 83
Target Start/End: Complemental strand, 13125058 - 13124994
Alignment:
Q  19 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctggg 83  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13125058 aaaacacgctgaaaggactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctggg 13124994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 19 - 91
Target Start/End: Original strand, 28496077 - 28496149
Alignment:
Q  19 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgggatgttaca 91  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||| ||||||||    
T  28496077 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaaacagtttggaatgttaca 28496149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 19 - 91
Target Start/End: Original strand, 43233180 - 43233252
Alignment:
Q  19 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgggatgttaca 91  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||| ||||    
T  43233180 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagattgggatgctaca 43233252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 19 - 90
Target Start/End: Original strand, 2189367 - 2189438
Alignment:
Q  19 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgggatgttac 90  Q
    |||||||||||| ||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||    
T  2189367 aaaacacgctgagaagactcgtgttgatttgtggggacagtcggcaatcctgaaagcagtctgggatgttac 2189438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 19 - 91
Target Start/End: Original strand, 18833509 - 18833581
Alignment:
Q  19 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgggatgttaca 91  Q
    |||||||||||||||||||||||||| |||||||| | ||||||||||||||||||||||||||| |||||||    
T  18833509 aaaacacgctgaaaagactcgtgttgatttgtgggataagtcggcaatcctgaaagcagtctggggtgttaca 18833581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 32 - 91
Target Start/End: Original strand, 43776321 - 43776380
Alignment:
Q  32 aagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgggatgttaca 91  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  43776321 aagactcgtgttggtttgtggggttagtcggcaatcctgaaagcagtctgggatgttaca 43776380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 19 - 91
Target Start/End: Complemental strand, 29038943 - 29038871
Alignment:
Q  19 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgggatgttaca 91  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||| || ||||  |||||||||||||||    
T  29038943 aaaacacgctgaaaagactcgtgttggtttgtagggtcagtcggcaatgcttaaagtcgtctgggatgttaca 29038871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 19 - 73
Target Start/End: Original strand, 42515767 - 42515821
Alignment:
Q  19 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaa 73  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  42515767 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcttgaaa 42515821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 19 - 92
Target Start/End: Complemental strand, 6747529 - 6747456
Alignment:
Q  19 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgggatgttacat 92  Q
    |||||| | |||||||||| |||||||||||| ||||||||||||||| || ||||||||||||||||||||||    
T  6747529 aaaacaagttgaaaagacttgtgttggtttgtagggtcagtcggcaatgcttaaagcagtctgggatgttacat 6747456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 19 - 91
Target Start/End: Complemental strand, 6718998 - 6718926
Alignment:
Q  19 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgggatgttaca 91  Q
    ||||||| ||||||||| |||||||||||||||||||||||| |||||||| ||||  |||||||||||||||    
T  6718998 aaaacacactgaaaagaatcgtgttggtttgtggggtcagtcagcaatcctaaaagtcgtctgggatgttaca 6718926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 19 - 91
Target Start/End: Original strand, 7646638 - 7646710
Alignment:
Q  19 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgggatgttaca 91  Q
    ||||||| ||||||||||||||||||||||||||||| ||||| ||||||| ||||  |||||||||||||||    
T  7646638 aaaacacactgaaaagactcgtgttggtttgtggggttagtcgacaatcctaaaagtcgtctgggatgttaca 7646710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 19 - 91
Target Start/End: Original strand, 42515315 - 42515387
Alignment:
Q  19 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgggatgttaca 91  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||| || ||||  ||||| |||||||||    
T  42515315 aaaacacgctgaaaagactcgtgttggtttgtagggtcagtcggcaatgcttaaagtcgtctgtgatgttaca 42515387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 19 - 92
Target Start/End: Original strand, 36422605 - 36422678
Alignment:
Q  19 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgggatgttacat 92  Q
    ||||||| |||||||||||||||||| |||||||||||||||| |||| || |||| | |||||||||||||||    
T  36422605 aaaacacactgaaaagactcgtgttgatttgtggggtcagtcgacaatgctaaaagtaatctgggatgttacat 36422678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 19 - 91
Target Start/End: Complemental strand, 6747999 - 6747927
Alignment:
Q  19 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgggatgttaca 91  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||| || ||||  ||||| || ||||||    
T  6747999 aaaacacgctgaaaagactcgtgttggtttgtagggtcagtcggcaatgcttaaagtcgtctgagaggttaca 6747927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 19 - 91
Target Start/End: Complemental strand, 34405514 - 34405442
Alignment:
Q  19 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgggatgttaca 91  Q
    |||||||||||||||||| ||||||| |||||||||||||||| ||||||| ||||  |||| ||||||||||    
T  34405514 aaaacacgctgaaaagacccgtgttgatttgtggggtcagtcgacaatcctaaaagttgtctaggatgttaca 34405442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 19 - 73
Target Start/End: Complemental strand, 26419158 - 26419104
Alignment:
Q  19 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaa 73  Q
    |||||| | |||||||||||||||||||||||||||||||||| |||||||||||    
T  26419158 aaaacatgttgaaaagactcgtgttggtttgtggggtcagtcgacaatcctgaaa 26419104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 95 - 196
Target Start/End: Original strand, 37792704 - 37792805
Alignment:
Q  95 gacgccttctccttctcaccggcgggtgcctgcttacgatctaggttgagtttccgcttcagaccggcgtcattgcccgtgttttgttgttagttttcat 194  Q
    ||||||| |||||| |||||||||  |||||  ||||||| | ||||| |||||||||||| ||||||||| ||| |||||||||| |||| | ||||||    
T  37792704 gacgcctactccttgtcaccggcgattgcctttttacgatatgggttgtgtttccgcttcaaaccggcgtcgttgtccgtgttttgctgttgggtttcat 37792803  T
Q  195 ct 196  Q
    ||    
T  37792804 ct 37792805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 8 - 91
Target Start/End: Complemental strand, 3305282 - 3305199
Alignment:
Q  8 cgagagagaagaaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgggatgttaca 91  Q
    |||| ||||| |||||||||||||||||||||||||| ||||| || |||||| ||||| || ||||  |||||| ||||||||    
T  3305282 cgagtgagaacaaaacacgctgaaaagactcgtgttgatttgtaggatcagtcagcaatacttaaagtcgtctggaatgttaca 3305199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 19 - 72
Target Start/End: Original strand, 11372666 - 11372719
Alignment:
Q  19 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaa 72  Q
    |||||| ||||||||||||||||||||||||| |||||| || |||||||||||    
T  11372666 aaaacatgctgaaaagactcgtgttggtttgtagggtcactcagcaatcctgaa 11372719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 46 - 91
Target Start/End: Original strand, 18833633 - 18833678
Alignment:
Q  46 tttgtggggtcagtcggcaatcctgaaagcagtctgggatgttaca 91  Q
    |||||||| ||||||||||||||||||||||||||||| |||||||    
T  18833633 tttgtgggatcagtcggcaatcctgaaagcagtctggggtgttaca 18833678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 19 - 91
Target Start/End: Original strand, 2466147 - 2466218
Alignment:
Q  19 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgggatgttaca 91  Q
    ||||||||||||||||||||||||| ||||||  ||||||||| |||| || ||||  |||||||||||||||    
T  2466147 aaaacacgctgaaaagactcgtgttagtttgt-aggtcagtcgacaatgcttaaagtcgtctgggatgttaca 2466218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 19 - 91
Target Start/End: Complemental strand, 2611582 - 2611510
Alignment:
Q  19 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgggatgttaca 91  Q
    ||||||| |||||||||||||||||||||||| |||||||||| |||| || ||||  || ||| ||||||||    
T  2611582 aaaacactctgaaaagactcgtgttggtttgtagggtcagtcgacaatgcttaaagtcgtatggaatgttaca 2611510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 23 - 91
Target Start/End: Complemental strand, 31743808 - 31743740
Alignment:
Q  23 cacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgggatgttaca 91  Q
    |||||||||||||||||||||||||||| |||| ||||| |||| || ||||  || ||||||||||||    
T  31743808 cacgctgaaaagactcgtgttggtttgtagggttagtcgacaatgcttaaagtcgtttgggatgttaca 31743740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 19 - 54
Target Start/End: Complemental strand, 43776213 - 43776178
Alignment:
Q  19 aaaacacgctgaaaagactcgtgttggtttgtgggg 54  Q
    ||||||||||||||||||||||||||||||||||||    
T  43776213 aaaacacgctgaaaagactcgtgttggtttgtgggg 43776178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 19 - 92
Target Start/End: Original strand, 25182584 - 25182657
Alignment:
Q  19 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgggatgttacat 92  Q
    |||||||||| |||| |||||| |||| ||||||||||| |||  |||||| |||||| || ||||||||||||    
T  25182584 aaaacacgctaaaaaaactcgtattgggttgtggggtcaatcgaaaatcctaaaagcactcagggatgttacat 25182657  T

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Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 19 - 89
Target Start/End: Complemental strand, 31406512 - 31406440
Alignment:
Q  19 aaaacacgctgaaaagactcgtgttggtttgtggggt--cagtcggcaatcctgaaagcagtctgggatgtta 89  Q
    |||||| |||||||||||  |||||||||||| ||||  ||||||| |||||||||||||| ||| |||||||    
T  31406512 aaaacatgctgaaaagacatgtgttggtttgtagggtgtcagtcggtaatcctgaaagcagactgagatgtta 31406440  T

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Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 91
Target Start/End: Original strand, 680040 - 680111
Alignment:
Q  19 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgggatgttaca 91  Q
    |||||||||||||||||||| |||||||||||  ||||||||  |||| || ||||  |||||||||||||||    
T  680040 aaaacacgctgaaaagactcatgttggtttgt-aggtcagtctacaatgcttaaagtcgtctgggatgttaca 680111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 91
Target Start/End: Complemental strand, 22529158 - 22529086
Alignment:
Q  19 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgggatgttaca 91  Q
    |||| ||||||||||||||| ||||||||||| |||||||||| |||| || ||||  ||| | |||||||||    
T  22529158 aaaatacgctgaaaagactcatgttggtttgtagggtcagtcgacaatgcttaaagtcgtccgagatgttaca 22529086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 19 - 66
Target Start/End: Complemental strand, 7461305 - 7461258
Alignment:
Q  19 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaat 66  Q
    |||||||||||||||||||||||||| |||||||| ||| ||| ||||    
T  7461305 aaaacacgctgaaaagactcgtgttgatttgtgggatcaatcgacaat 7461258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 123 - 185
Target Start/End: Original strand, 1320125 - 1320187
Alignment:
Q  123 cctgcttacgatctaggttgagtttccgcttcagaccggcgtcattgcccgtgttttgttgtt 185  Q
    |||| ||||||||||||||| ||| || |||| ||||||||||  || |||||||||||||||    
T  1320125 cctgtttacgatctaggttgtgttcccacttcggaccggcgtcgatgtccgtgttttgttgtt 1320187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 57
Target Start/End: Complemental strand, 29357390 - 29357341
Alignment:
Q  8 cgagagagaagaaaacacgctgaaaagactcgtgttggtttgtggggtca 57  Q
    |||| ||||| ||| |||| ||||||||||||||||||||||| ||||||    
T  29357390 cgagtgagaacaaagcacgttgaaaagactcgtgttggtttgtagggtca 29357341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 91
Target Start/End: Complemental strand, 36015392 - 36015320
Alignment:
Q  19 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgggatgttaca 91  Q
    |||| ||||| |||||||||||||| |||||| | || ||||||||||||| ||| || | || |||||||||    
T  36015392 aaaatacgctaaaaagactcgtgttagtttgtagagttagtcggcaatcctaaaaacaatatgagatgttaca 36015320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 172; Significance: 3e-92; HSPs: 37)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 172; E-Value: 3e-92
Query Start/End: Original strand, 93 - 416
Target Start/End: Original strand, 697677 - 697999
Alignment:
Q  93 cggacgccttctccttctcaccggcgggtgcctgcttacgatctaggttgagtttccgcttcagaccggcgtcattgcccgtgttttgttgttagttttc 192  Q
    |||| ||||||||||| |||| |||  ||||||| ||||||||||||||||||||||||||||||||||||||  |||||||||  ||||||||| ||||    
T  697677 cggaagccttctccttgtcactggcatgtgcctgtttacgatctaggttgagtttccgcttcagaccggcgtcgctgcccgtgtgctgttgttaggtttc 697776  T
Q  193 atctcctttgggtctgtgtttaggtcgatgcctgtttcttggtgaggtggtttggaggcgttgtccttgtctcttttgttggtttgagggttattctcta 292  Q
    ||||||||| ||| |||||||||||| |||| |||||||||  ||||||||||||||||| ||||||||||||||||||||||||  |||||||||| |     
T  697777 atctccttttggtatgtgtttaggtcaatgcttgtttcttgacgaggtggtttggaggcgctgtccttgtctcttttgttggtttatgggttattctttg 697876  T
Q  293 tggttgcttctttagaatgctttggggatgcttgctgctttccttggtgactttcaaccttgttgtcttgcgcttgtgtctgttgatccgtggtgttagg 392  Q
    ||||||||||||  ||| | | |||||| ||||||| |||| ||||| |||||||||||||| ||||||||||||||||||| | | |||||||||| ||    
T  697877 tggttgcttcttcggaaagttatggggaggcttgctacttttcttggagactttcaaccttgctgtcttgcgcttgtgtctgctaaaccgtggtgtt-gg 697975  T
Q  393 tttgtgtggtgggggtgatgatgt 416  Q
    || |||||||||||||||||||||    
T  697976 ttagtgtggtgggggtgatgatgt 697999  T

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Target: chr5; HSP #2
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 95 - 370
Target Start/End: Original strand, 27712373 - 27712650
Alignment:
Q  95 gacgccttctccttctcaccggcgggtgcctgcttacgatctaggttgagtttccgcttcagaccggcgtcattgcccgtgttttgttgttagttttcat 194  Q
    |||||||||||||| ||||||| || |||||| ||||||||||| ||| |||||  ||||||||||||||| ||||||||||||||||||| | ||||||    
T  27712373 gacgccttctccttgtcaccggtggttgcctgtttacgatctagattgtgtttctacttcagaccggcgtcgttgcccgtgttttgttgttgggtttcat 27712472  T
Q  195 c-tcctttgggtctgtgtttaggtcgatgcctgtttcttggtgaggtggtttggaggcgttgtccttgtctcttttgttggtttgagggt-tattctcta 292  Q
    | |||||| ||||||||||| ||| | || ||||||||||| |||||||||||||||||| ||| |||||||||||| || |||| | || | ||||||     
T  27712473 cttccttttggtctgtgtttgggttgttgtctgtttcttggcgaggtggtttggaggcgtggtctttgtctcttttgatgatttgtgtgtattttctctg 27712572  T
Q  293 tggttgcttctttagaatgctttggggatgcttgctgctttccttggtgactttcaaccttgttgtcttgcgcttgtg 370  Q
    |||||| |||||  ||||  | ||| |||| ||||| |||||||| | |||||||||||| ||||| |||| ||||||    
T  27712573 tggttgtttcttcggaatattatggtgatgtttgcttctttccttagagactttcaacctcgttgtattgctcttgtg 27712650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 19 - 92
Target Start/End: Complemental strand, 8641958 - 8641885
Alignment:
Q  19 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgggatgttacat 92  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8641958 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgggatgttacat 8641885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 94 - 333
Target Start/End: Complemental strand, 22687323 - 22687082
Alignment:
Q  94 ggacgccttctccttctcaccggcgggtgcctgcttacgatctaggttgagtttccgcttcagaccggcgtcattgcccgtgttttgttgttagttttca 193  Q
    ||||||||||||||| |||| ||||| |||||| |||||||| |||||| |||||||||||||||  | |||  ||| |||||||||||||||| |||||    
T  22687323 ggacgccttctccttgtcactggcggatgcctgtttacgatccaggttgtgtttccgcttcagacttgtgtcgctgctcgtgttttgttgttaggtttca 22687224  T
Q  194 tc-tcctttgggtctgtgtttaggtcgatgcctgtttcttggtgaggtggtttggaggcgttgtccttgtctcttttgttggtttgaggg-ttattctct 291  Q
    || |||||| | | ||||||| |||     | |||||||||| |||||||||||| ||||| ||| |||||||||||  ||||||| ||| ||||||||     
T  22687223 tcttccttttgatatgtgtttgggtttcaacatgtttcttggcgaggtggtttggcggcgtagtctttgtctcttttaatggtttgtgggtttattctca 22687124  T
Q  292 atggttgcttctttagaatgctttggggatgcttgctgcttt 333  Q
     ||||||||||||  || | || ||| |||| ||||||||||    
T  22687123 gtggttgcttcttcggacttctatggtgatgtttgctgcttt 22687082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 19 - 91
Target Start/End: Complemental strand, 3886524 - 3886452
Alignment:
Q  19 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgggatgttaca 91  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  3886524 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcattctgggatgttaca 3886452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 19 - 91
Target Start/End: Complemental strand, 3886980 - 3886908
Alignment:
Q  19 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgggatgttaca 91  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3886980 aaaacacgctgacaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgggatgttaca 3886908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 19 - 91
Target Start/End: Original strand, 34371835 - 34371907
Alignment:
Q  19 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgggatgttaca 91  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34371835 aaaacacgttgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgggatgttaca 34371907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 19 - 91
Target Start/End: Original strand, 2474628 - 2474700
Alignment:
Q  19 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgggatgttaca 91  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||    
T  2474628 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctaaaagcagtctgggacgttaca 2474700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 19 - 90
Target Start/End: Original strand, 2474172 - 2474243
Alignment:
Q  19 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgggatgttac 90  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||    
T  2474172 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctaaaagcagtatgggatgttac 2474243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 19 - 89
Target Start/End: Complemental strand, 21884008 - 21883938
Alignment:
Q  19 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgggatgtta 89  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||    
T  21884008 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcgacaatcttgaaagcagtctgggatgtta 21883938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 19 - 92
Target Start/End: Complemental strand, 15512935 - 15512862
Alignment:
Q  19 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgggatgttacat 92  Q
    |||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  15512935 aaaatacgttgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgggatattacat 15512862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 19 - 91
Target Start/End: Original strand, 189291 - 189363
Alignment:
Q  19 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgggatgttaca 91  Q
    ||||||||||||||||||||||||||||||||||| |||||| ||||||||||||| ||||||||||||||||    
T  189291 aaaacacgctgaaaagactcgtgttggtttgtgggatcagtccgcaatcctgaaagtagtctgggatgttaca 189363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 19 - 91
Target Start/End: Original strand, 2194027 - 2194099
Alignment:
Q  19 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgggatgttaca 91  Q
    |||||||||||||||||| |||||||||||||||||||||||| |||| ||||||||||||||||||||||||    
T  2194027 aaaacacgctgaaaagacccgtgttggtttgtggggtcagtcgacaatgctgaaagcagtctgggatgttaca 2194099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 19 - 91
Target Start/End: Complemental strand, 42788569 - 42788497
Alignment:
Q  19 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgggatgttaca 91  Q
    |||||||||||||||||| ||||||||||||||| |||||||| |||||||||||||||||||||||||||||    
T  42788569 aaaacacgctgaaaagacccgtgttggtttgtggagtcagtcgacaatcctgaaagcagtctgggatgttaca 42788497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 19 - 92
Target Start/End: Original strand, 34868001 - 34868074
Alignment:
Q  19 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgggatgttacat 92  Q
    |||||||||| ||||||||||||||| |||||||| || |||||||||||||||||||||||||||||||||||    
T  34868001 aaaacacgctaaaaagactcgtgttgatttgtgggatccgtcggcaatcctgaaagcagtctgggatgttacat 34868074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 19 - 91
Target Start/End: Complemental strand, 30684934 - 30684862
Alignment:
Q  19 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgggatgttaca 91  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||| || |||||||||    
T  30684934 aaaacacgctgaaaagactcgtgttggtttgtggggtcaatcggcaatcttgaaagcagtttgagatgttaca 30684862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 19 - 91
Target Start/End: Original strand, 34372291 - 34372363
Alignment:
Q  19 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgggatgttaca 91  Q
    ||||||||||||||| |||||||||||||| ||| ||||||||||||||||||||||||||||| ||||||||    
T  34372291 aaaacacgctgaaaatactcgtgttggtttatggcgtcagtcggcaatcctgaaagcagtctggaatgttaca 34372363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 19 - 91
Target Start/End: Complemental strand, 17445378 - 17445306
Alignment:
Q  19 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgggatgttaca 91  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||  | |||||||||||||    
T  17445378 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcgacaatcctaaaagtcgcctgggatgttaca 17445306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 19 - 91
Target Start/End: Complemental strand, 30720183 - 30720111
Alignment:
Q  19 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgggatgttaca 91  Q
    |||||||||||||||||||| ||||||||||||| |||| ||| ||||| |||||||||||||||||||||||    
T  30720183 aaaacacgctgaaaagactcctgttggtttgtggagtcaatcgacaatcttgaaagcagtctgggatgttaca 30720111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 19 - 91
Target Start/End: Original strand, 22557192 - 22557265
Alignment:
Q  19 aaaacacgctg-aaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgggatgttaca 91  Q
    ||||||||||| ||||||||||||||||||||| |||||||||| |||||||||| |  |||||||||||||||    
T  22557192 aaaacacgctgtaaaagactcgtgttggtttgtagggtcagtcgacaatcctgaatgtcgtctgggatgttaca 22557265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 19 - 91
Target Start/End: Complemental strand, 20858465 - 20858393
Alignment:
Q  19 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgggatgttaca 91  Q
    ||||||||||||||| |||||||||| |||||  ||||||||| |||||||||||| ||| ||||||||||||    
T  20858465 aaaacacgctgaaaatactcgtgttgatttgttaggtcagtcgacaatcctgaaagaagtttgggatgttaca 20858393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 19 - 91
Target Start/End: Complemental strand, 29680030 - 29679959
Alignment:
Q  19 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgggatgttaca 91  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||| || ||||  |||| ||||||||||    
T  29680030 aaaacacgctgaaaagactcgtgttggtttgtagggtcagtcggcaatgcttaaagtcgtct-ggatgttaca 29679959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 19 - 91
Target Start/End: Original strand, 22556759 - 22556832
Alignment:
Q  19 aaaacacgctg-aaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgggatgttaca 91  Q
    ||||||||||| ||||||||||||||||||||| |||||||||| ||||||| || |  |||||||||||||||    
T  22556759 aaaacacgctgtaaaagactcgtgttggtttgtagggtcagtcgacaatccttaatgtcgtctgggatgttaca 22556832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 19 - 91
Target Start/End: Original strand, 1822129 - 1822201
Alignment:
Q  19 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgggatgttaca 91  Q
    |||||||||||||||||||||||||||||||| ||||| |||  |||| || ||||  |||||||||||||||    
T  1822129 aaaacacgctgaaaagactcgtgttggtttgtagggtcggtcaacaatgcttaaagtcgtctgggatgttaca 1822201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 19 - 74
Target Start/End: Complemental strand, 24182169 - 24182114
Alignment:
Q  19 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaag 74  Q
    |||||||| |||||||| ||||||||||||||||||| ||||| ||||||||||||    
T  24182169 aaaacacgttgaaaagattcgtgttggtttgtggggttagtcgacaatcctgaaag 24182114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 19 - 89
Target Start/End: Complemental strand, 10927326 - 10927256
Alignment:
Q  19 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgggatgtta 89  Q
    |||||||||||||||||||||||||||||||| ||||| |||| ||||||  ||||  || ||||||||||    
T  10927326 aaaacacgctgaaaagactcgtgttggtttgtagggtcggtcgacaatcccaaaagacgtatgggatgtta 10927256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 25 - 78
Target Start/End: Complemental strand, 11757198 - 11757145
Alignment:
Q  25 cgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagt 78  Q
    |||| ||||||||| |||||||||| ||||||||||||||||||| ||||||||    
T  11757198 cgcttaaaagactcttgttggtttgcggggtcagtcggcaatcctaaaagcagt 11757145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 19 - 92
Target Start/End: Complemental strand, 18750119 - 18750046
Alignment:
Q  19 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgggatgttacat 92  Q
    ||||||| ||||||||||||| ||||||||||||||||||||  |||| || ||||  || |||||||||||||    
T  18750119 aaaacacactgaaaagactcgagttggtttgtggggtcagtcaacaatacttaaagtcgtatgggatgttacat 18750046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 8 - 92
Target Start/End: Original strand, 39147144 - 39147228
Alignment:
Q  8 cgagagagaagaaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgggatgttacat 92  Q
    |||||||| | |||| |||||  |||||||| ||||||||||| |||||| |||||||| || ||||  ||||||||||||||||    
T  39147144 cgagagaggacaaaaaacgctagaaagactcatgttggtttgtagggtcaatcggcaatgcttaaagtcgtctgggatgttacat 39147228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 19 - 61
Target Start/End: Complemental strand, 8391245 - 8391203
Alignment:
Q  19 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcg 61  Q
    |||||||||||| ||||||||||||| ||||||||||||||||    
T  8391245 aaaacacgctgagaagactcgtgttgatttgtggggtcagtcg 8391203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 293 - 369
Target Start/End: Original strand, 8730433 - 8730508
Alignment:
Q  293 tggttgcttctttagaatgctttggggatgcttgctgctttccttggtgactttcaaccttgttgtcttgcgcttgt 369  Q
    ||||||| |||||| |||||| ||| |||| ||| ||||| |||||| |||||||||| |||||||||||| |||||    
T  8730433 tggttgcctctttataatgctatggcgatg-ttgttgcttaccttggagactttcaactttgttgtcttgctcttgt 8730508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 19 - 50
Target Start/End: Original strand, 1880299 - 1880330
Alignment:
Q  19 aaaacacgctgaaaagactcgtgttggtttgt 50  Q
    ||||||||||||||||||||||||||||||||    
T  1880299 aaaacacgctgaaaagactcgtgttggtttgt 1880330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 8 - 91
Target Start/End: Complemental strand, 30719739 - 30719656
Alignment:
Q  8 cgagagagaagaaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgggatgttaca 91  Q
    |||||||||| ||||||  || ||||||||||| ||  |||||||||||| ||| ||||||| ||| ||||||  |||||||||    
T  30719739 cgagagagaacaaaacatactaaaaagactcgtattaatttgtggggtcaatcgccaatcctaaaaacagtcttagatgttaca 30719656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 48
Target Start/End: Original strand, 187781 - 187810
Alignment:
Q  19 aaaacacgctgaaaagactcgtgttggttt 48  Q
    ||||||||||||||||||||||||||||||    
T  187781 aaaacacgctgaaaagactcgtgttggttt 187810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 28 - 92
Target Start/End: Complemental strand, 2058572 - 2058507
Alignment:
Q  28 tgaaaagactcgtgttggtttgtgggg-tcagtcggcaatcctgaaagcagtctgggatgttacat 92  Q
    |||||| ||||||||| |||||||||| ||| | | |||||||||||||||| || ||||||||||    
T  2058572 tgaaaaaactcgtgttagtttgtgggggtcaatagacaatcctgaaagcagtttgagatgttacat 2058507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 91
Target Start/End: Complemental strand, 27646758 - 27646685
Alignment:
Q  19 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcgg-caatcctgaaagcagtctgggatgttaca 91  Q
    |||||| ||||||||||||| |||||||||||  ||||||||||  ||| || ||||  |||||||||||||||    
T  27646758 aaaacatgctgaaaagactcatgttggtttgtatggtcagtcggaaaatgcttaaagttgtctgggatgttaca 27646685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 91
Target Start/End: Complemental strand, 20039398 - 20039327
Alignment:
Q  19 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgggatgttaca 91  Q
    |||||||||||||||||||| |||||||||||  | ||||| |||||| || ||||  |||| ||||||||||    
T  20039398 aaaacacgctgaaaagactcatgttggtttgt-tgatcagttggcaatgcttaaagtcgtctaggatgttaca 20039327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 78; Significance: 3e-36; HSPs: 56)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 225 - 389
Target Start/End: Original strand, 28966293 - 28966458
Alignment:
Q  225 tgtttcttggtgaggtggtttggaggcgttgtccttgtctcttttgttggtttgagggtt-attctctatggttgcttctttagaatgctttggggatgc 323  Q
    |||||||| | |||||||||||||||||| ||| |||||||||||| ||||||| | ||| ||||||  ||||||||||||| ||||| | ||| ||||     
T  28966293 tgtttcttagcgaggtggtttggaggcgtagtctttgtctcttttgatggtttgtgagtttattctccgtggttgcttctttggaatgttatggtgatgt 28966392  T
Q  324 ttgctgctttccttggtgactttcaaccttgttgtcttgcgcttgtgtctgttgatccgtggtgtt 389  Q
    ||||| |||||||||| |||||||||||| |||||||||| |||||||||| ||| ||||||||||    
T  28966393 ttgctactttccttggagactttcaacctcgttgtcttgctcttgtgtctgctgaaccgtggtgtt 28966458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 8 - 91
Target Start/End: Original strand, 35477872 - 35477955
Alignment:
Q  8 cgagagagaagaaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgggatgttaca 91  Q
    |||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  35477872 cgagagaggacaaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtatgggatgttaca 35477955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 19 - 91
Target Start/End: Complemental strand, 15268090 - 15268018
Alignment:
Q  19 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgggatgttaca 91  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||    
T  15268090 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctcggctgttaca 15268018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 19 - 91
Target Start/End: Complemental strand, 24629353 - 24629281
Alignment:
Q  19 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgggatgttaca 91  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||    
T  24629353 aaaacacgctgaaaagactcgtgttagtttgtggggtcagtcggcaatcctgaaagcagtctgtgatgttaca 24629281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 19 - 92
Target Start/End: Complemental strand, 4127335 - 4127262
Alignment:
Q  19 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgggatgttacat 92  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | | |||||||||    
T  4127335 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtttagaatgttacat 4127262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 131 - 370
Target Start/End: Original strand, 38929124 - 38929364
Alignment:
Q  131 cgatctaggttgagtttccgcttcagaccggcgtcattgcccgtgttttgttgttagttttcatc-tcctttgggtctgtgtttaggtcgatgcctgttt 229  Q
    |||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||| ||||| |||||| | | |   ||| ||| | |||||||||    
T  38929124 cgatctaggttgtgtttccgcttcagaccggcgtcactgcccgtgttttgttgttagttatcatcttccttttgatttagctttgggttgttgcctgttt 38929223  T
Q  230 cttggtgaggtggtttggaggcgttgtccttgtctcttttgttggtttgagggtt-attctctatggttgcttctttagaatgctttggggatgcttgct 328  Q
    ||||  |||||| ||||   | || ||| |||||||||| | ||||||| ||||| || |||  |||||| |||||  ||||||| ||| |||| |||||    
T  38929224 cttgacgaggtgatttgacagtgtagtctttgtctctttcgatggtttgtgggttaatactccgtggttgtttcttcggaatgctatggtgatgtttgct 38929323  T
Q  329 gctttccttggtgactttcaaccttgttgtcttgcgcttgtg 370  Q
    |||| |||||| ||| ||||||||  || |||||| ||||||    
T  38929324 gcttgccttggagac-ttcaacctcattttcttgcacttgtg 38929364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 19 - 91
Target Start/End: Complemental strand, 7678539 - 7678467
Alignment:
Q  19 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgggatgttaca 91  Q
    |||||||||||||||||||||||| |||||||||||||||||| |||| ||||||||||||||||||||||||    
T  7678539 aaaacacgctgaaaagactcgtgtaggtttgtggggtcagtcgacaatgctgaaagcagtctgggatgttaca 7678467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 15 - 91
Target Start/End: Original strand, 13265855 - 13265931
Alignment:
Q  15 gaagaaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgggatgttaca 91  Q
    ||||||||||||||||||||||||||||| ||||||| |||||||||| |||||||||||||||||| |||||||||    
T  13265855 gaagaaaacacgctgaaaagactcgtgttagtttgtgcggtcagtcggtaatcctgaaagcagtctgagatgttaca 13265931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 19 - 91
Target Start/End: Complemental strand, 23350200 - 23350128
Alignment:
Q  19 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgggatgttaca 91  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||    
T  23350200 aaaacacactgaaaagactcgtgttggtttgtggggtcagtcggcaattctgaaagcagtctggggtgttaca 23350128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 19 - 91
Target Start/End: Complemental strand, 50398911 - 50398839
Alignment:
Q  19 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgggatgttaca 91  Q
    |||||||| || |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  50398911 aaaacacgttggaaagactcgtgttggtttgtagggtcagtcggcaatcctgaaagcagtctgggatgttaca 50398839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 95 - 263
Target Start/End: Original strand, 8254354 - 8254523
Alignment:
Q  95 gacgccttctccttctcaccggcgggtgcctgcttacgatctaggttgagtttccgcttcagaccggcgtcattgcccgtgttttgttgttagttttcat 194  Q
    |||||||||||||  |||| | ||| ||  || ||||||||||||||| || ||| |||||||||| ||||  ||||||||| |||||||| | ||||||    
T  8254354 gacgccttctcctcgtcactgacggatgtatgtttacgatctaggttgtgtctccacttcagaccgacgtcgatgcccgtgtcttgttgttgggtttcat 8254453  T
Q  195 c-tcctttgggtctgtgtttaggtcgatgcctgtttcttggtgaggtggtttggaggcgttgtccttgtc 263  Q
    | |||||| |||||||||| |||| | |||||||||||||| |||| |||||||||| || ||| |||||    
T  8254454 cttccttttggtctgtgttcaggttgctgcctgtttcttggcgagggggtttggaggtgtagtctttgtc 8254523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 95 - 263
Target Start/End: Original strand, 8267772 - 8267941
Alignment:
Q  95 gacgccttctccttctcaccggcgggtgcctgcttacgatctaggttgagtttccgcttcagaccggcgtcattgcccgtgttttgttgttagttttcat 194  Q
    |||||||||||||  |||| | ||| ||  || ||||||||||||||| || ||| |||||||||| ||||  ||||||||| |||||||| | ||||||    
T  8267772 gacgccttctcctcgtcactgacggatgtatgtttacgatctaggttgtgtctccacttcagaccgacgtcgatgcccgtgtcttgttgttgggtttcat 8267871  T
Q  195 c-tcctttgggtctgtgtttaggtcgatgcctgtttcttggtgaggtggtttggaggcgttgtccttgtc 263  Q
    | |||||| |||||||||| |||| | |||||||||||||| |||| |||||||||| || ||| |||||    
T  8267872 cttccttttggtctgtgttcaggttgctgcctgtttcttggcgagggggtttggaggtgtagtctttgtc 8267941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 19 - 92
Target Start/End: Original strand, 49998859 - 49998932
Alignment:
Q  19 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgggatgttacat 92  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||| |||| ||||||||    
T  49998859 aaaacacgctgaaaagactcgtgttggtttgtggggacagtcggcaattctgaaagcagtttggggtgttacat 49998932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 26 - 91
Target Start/End: Original strand, 50399334 - 50399399
Alignment:
Q  26 gctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgggatgttaca 91  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||    
T  50399334 gctgaaaagactcgtgttggtttgtagggtcagtcggcaatcctgaaagcagtctgcgatgttaca 50399399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 31 - 95
Target Start/End: Complemental strand, 50398443 - 50398379
Alignment:
Q  31 aaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgggatgttacatcgg 95  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||    
T  50398443 aaagactcgtgttggtttgtagggtcagtcggcaatcctgaaagcagtctgagatgttacatcgg 50398379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 8 - 91
Target Start/End: Original strand, 13266298 - 13266381
Alignment:
Q  8 cgagagagaagaaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgggatgttaca 91  Q
    |||| ||| |||||||| | |||||||||| ||||||||||||||||||||||| |||||||||||||||| ||||||||||||    
T  13266298 cgagtgaggagaaaacatgttgaaaagacttgtgttggtttgtggggtcagtcgacaatcctgaaagcagtatgggatgttaca 13266381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 19 - 76
Target Start/End: Original strand, 35871850 - 35871907
Alignment:
Q  19 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagca 76  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  35871850 aaaacacgctgaaaagactcgtgttggtttgtgggatcagtcggcaatcctgaaagca 35871907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 19 - 79
Target Start/End: Complemental strand, 14571605 - 14571545
Alignment:
Q  19 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtc 79  Q
    |||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  14571605 aaaacacgttgaaaagactcgtgttggtttgtggggtcagtcgggaatcctgaaagcagtc 14571545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 19 - 83
Target Start/End: Complemental strand, 14572071 - 14572007
Alignment:
Q  19 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctggg 83  Q
    |||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||| ||||    
T  14572071 aaaacacggtgaaaagactcgtgttggtttgcggggtcagtcggcaatcctgaaagcagtatggg 14572007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 19 - 91
Target Start/End: Complemental strand, 4127806 - 4127739
Alignment:
Q  19 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgggatgttaca 91  Q
    ||||||||||||||||||||||||||||||||||     |||||||||| |||||||||||||||||||||||    
T  4127806 aaaacacgctgaaaagactcgtgttggtttgtgg-----gtcggcaatcttgaaagcagtctgggatgttaca 4127739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 19 - 91
Target Start/End: Complemental strand, 23943159 - 23943087
Alignment:
Q  19 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgggatgttaca 91  Q
    |||||||||||||||||||||||||||||||| |||||||||| |||| || ||||  |||||||||||||||    
T  23943159 aaaacacgctgaaaagactcgtgttggtttgtagggtcagtcgacaatgcttaaagtcgtctgggatgttaca 23943087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 19 - 91
Target Start/End: Original strand, 5810057 - 5810129
Alignment:
Q  19 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgggatgttaca 91  Q
    |||||||||||||||||||| ||||| |||||||||| ||||||||||||| |||| ||| || |||||||||    
T  5810057 aaaacacgctgaaaagactcatgttgatttgtggggttagtcggcaatcctaaaagaagtatgagatgttaca 5810129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 19 - 91
Target Start/End: Original strand, 7381490 - 7381562
Alignment:
Q  19 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgggatgttaca 91  Q
    |||||||||||||||||| ||||||||||||| ||||||||||||||| || ||||  || ||||||||||||    
T  7381490 aaaacacgctgaaaagacccgtgttggtttgtagggtcagtcggcaatgcttaaagtcgtatgggatgttaca 7381562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 19 - 91
Target Start/End: Complemental strand, 27578203 - 27578134
Alignment:
Q  19 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgggatgttaca 91  Q
    ||||||||||||||||||||||||||| |||| ||   |||||| ||||||||||| ||||||||||||||||    
T  27578203 aaaacacgctgaaaagactcgtgttgggttgtagg---agtcggtaatcctgaaaggagtctgggatgttaca 27578134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 140 - 253
Target Start/End: Complemental strand, 46699572 - 46699459
Alignment:
Q  140 ttgagtttccgcttcagaccggcgtcattgcccgtgttttgttgttagttttcatct-cctttgggtctgtgtttaggtcgatgcctgtttcttggtgag 238  Q
    |||||||||||||||| | |||||||  ||||||||| |||||||| |  ||||||| ||| | | ||||||||| ||| ||||||||| ||||||||||    
T  46699572 ttgagtttccgcttcaaatcggcgtcgctgcccgtgtattgttgttggaattcatcttcctattgatctgtgttt-ggttgatgcctgtgtcttggtgag 46699474  T
Q  239 gtggtttggaggcgt 253  Q
    ||||||||| |||||    
T  46699473 gtggtttggcggcgt 46699459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 19 - 92
Target Start/End: Complemental strand, 1645666 - 1645593
Alignment:
Q  19 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgggatgttacat 92  Q
    |||||||| ||||||||||||||||||||||| |||||||| |||||| || ||||  || |||||||||||||    
T  1645666 aaaacacgttgaaaagactcgtgttggtttgtagggtcagttggcaatgcttaaagtcgtatgggatgttacat 1645593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 21 - 89
Target Start/End: Original strand, 1464372 - 1464439
Alignment:
Q  21 aacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgggatgtta 89  Q
    ||||||||||||| |||||||||| ||||||||||| ||||  |||||| |||||||||||||||||||    
T  1464372 aacacgctgaaaa-actcgtgttgatttgtggggtcggtcgataatcctaaaagcagtctgggatgtta 1464439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 19 - 66
Target Start/End: Complemental strand, 4414304 - 4414257
Alignment:
Q  19 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaat 66  Q
    ||||||| |||||||||||||||||||||||| |||||||||||||||    
T  4414304 aaaacacactgaaaagactcgtgttggtttgtagggtcagtcggcaat 4414257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 46 - 92
Target Start/End: Original strand, 10668887 - 10668933
Alignment:
Q  46 tttgtggggtcagtcggcaatcctgaaagcagtctgggatgttacat 92  Q
    |||||||||||||| ||||||||||||||||||||||| ||||||||    
T  10668887 tttgtggggtcagttggcaatcctgaaagcagtctggggtgttacat 10668933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 46 - 92
Target Start/End: Original strand, 10882526 - 10882572
Alignment:
Q  46 tttgtggggtcagtcggcaatcctgaaagcagtctgggatgttacat 92  Q
    |||||||||||||| ||||||||||||||||||||||| ||||||||    
T  10882526 tttgtggggtcagtgggcaatcctgaaagcagtctggggtgttacat 10882572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 46 - 91
Target Start/End: Original strand, 10668381 - 10668426
Alignment:
Q  46 tttgtggggtcagtcggcaatcctgaaagcagtctgggatgttaca 91  Q
    |||||||||||||| ||||||||||||||||||||||| |||||||    
T  10668381 tttgtggggtcagtgggcaatcctgaaagcagtctggggtgttaca 10668426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 19 - 76
Target Start/End: Complemental strand, 27578374 - 27578317
Alignment:
Q  19 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagca 76  Q
    ||||||||| ||||||||||||| ||||||||||| ||||||  ||||||||||||||    
T  27578374 aaaacacgcagaaaagactcgtgatggtttgtgggatcagtcaacaatcctgaaagca 27578317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 31 - 92
Target Start/End: Complemental strand, 51331188 - 51331127
Alignment:
Q  31 aaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgggatgttacat 92  Q
    |||||||||| || |||||| |||||||||||||||||| |||| ||||| |||||||||||    
T  51331188 aaagactcgtattagtttgtagggtcagtcggcaatcctaaaagtagtctaggatgttacat 51331127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 19 - 59
Target Start/End: Complemental strand, 8467730 - 8467690
Alignment:
Q  19 aaaacacgctgaaaagactcgtgttggtttgtggggtcagt 59  Q
    |||||||| ||||||||||||||||||||||||||||||||    
T  8467730 aaaacacgttgaaaagactcgtgttggtttgtggggtcagt 8467690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 34 - 86
Target Start/End: Complemental strand, 8861981 - 8861929
Alignment:
Q  34 gactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgggatg 86  Q
    ||||| |||| ||||||||||||||||||||||  ||||||||||||||||||    
T  8861981 gactcatgtttgtttgtggggtcagtcggcaattatgaaagcagtctgggatg 8861929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 34 - 86
Target Start/End: Complemental strand, 8864854 - 8864802
Alignment:
Q  34 gactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgggatg 86  Q
    ||||| |||| ||||||||||||||||||||||  ||||||||||||||||||    
T  8864854 gactcatgtttgtttgtggggtcagtcggcaattatgaaagcagtctgggatg 8864802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 19 - 91
Target Start/End: Original strand, 21067505 - 21067577
Alignment:
Q  19 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgggatgttaca 91  Q
    ||||||| ||||||||||||||||| |||||| |||||||||  |||| || ||||  |||||||||||||||    
T  21067505 aaaacacactgaaaagactcgtgttagtttgttgggtcagtccacaatgcttaaagtcgtctgggatgttaca 21067577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 19 - 91
Target Start/End: Complemental strand, 31817055 - 31816983
Alignment:
Q  19 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgggatgttaca 91  Q
    |||||| | |||||||||||||| |||||||||||| || ||| ||||||||| || ||| ||||||||||||    
T  31817055 aaaacatgttgaaaagactcgtgctggtttgtggggccaatcgacaatcctgatagtagtatgggatgttaca 31816983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 34 - 82
Target Start/End: Complemental strand, 31817755 - 31817707
Alignment:
Q  34 gactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgg 82  Q
    |||||||||||||||| ||| |||||| |||||||||||||||||||||    
T  31817755 gactcgtgttggtttgagggatcagtcagcaatcctgaaagcagtctgg 31817707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 19 - 91
Target Start/End: Complemental strand, 44470792 - 44470720
Alignment:
Q  19 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgggatgttaca 91  Q
    ||||||||||| |||||||||||||||||||| |||||||||  |||| || ||||  ||||||| |||||||    
T  44470792 aaaacacgctggaaagactcgtgttggtttgtagggtcagtcaacaattcttaaagtcgtctggggtgttaca 44470720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 19 - 73
Target Start/End: Original strand, 17628734 - 17628788
Alignment:
Q  19 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaa 73  Q
    ||||||| ||| ||||||| |||||||| ||||| ||||||||||||||||||||    
T  17628734 aaaacacactggaaagacttgtgttggtatgtggagtcagtcggcaatcctgaaa 17628788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 21 - 75
Target Start/End: Original strand, 41870143 - 41870197
Alignment:
Q  21 aacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagc 75  Q
    |||||||||||||||||||||||  |||||||||| |||||| |||||| |||||    
T  41870143 aacacgctgaaaagactcgtgtttatttgtggggttagtcggtaatcctaaaagc 41870197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 19 - 92
Target Start/End: Original strand, 3169429 - 3169502
Alignment:
Q  19 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgggatgttacat 92  Q
    |||||||| |||||| |||||||||||||||| |||||||| |||||| || ||||  |||| ||||| |||||    
T  3169429 aaaacacgttgaaaatactcgtgttggtttgtagggtcagttggcaatacttaaagtcgtctaggatgctacat 3169502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 26 - 91
Target Start/End: Complemental strand, 21220264 - 21220199
Alignment:
Q  26 gctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgggatgttaca 91  Q
    |||||||||||| ||| || ||| |||||||||||||||||| |||||||||| || | |||||||    
T  21220264 gctgaaaagacttgtgctgatttctggggtcagtcggcaatcttgaaagcagtttgaggtgttaca 21220199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 128 - 185
Target Start/End: Complemental strand, 31051306 - 31051249
Alignment:
Q  128 ttacgatctaggttgagtttccgcttcagaccggcgtcattgcccgtgttttgttgtt 185  Q
    ||||||| | ||||| || |||||||||||||||||||  ||||||||||||||||||    
T  31051306 ttacgatttgggttgtgtgtccgcttcagaccggcgtcgctgcccgtgttttgttgtt 31051249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 13 - 74
Target Start/End: Complemental strand, 33294815 - 33294754
Alignment:
Q  13 gagaagaaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaag 74  Q
    ||||| ||||||||||||||||||||||||||| |||| | |||| ||  ||||||||||||    
T  33294815 gagaacaaaacacgctgaaaagactcgtgttgggttgtagcgtcaatctacaatcctgaaag 33294754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 19 - 92
Target Start/End: Original strand, 40607154 - 40607227
Alignment:
Q  19 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgggatgttacat 92  Q
    |||| |||||||||| |||||||||| |||||||  |||||||||||| || || |  ||||||||||||||||    
T  40607154 aaaatacgctgaaaaaactcgtgttgatttgtggaatcagtcggcaatgcttaaggtcgtctgggatgttacat 40607227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 59
Target Start/End: Original strand, 27026725 - 27026765
Alignment:
Q  19 aaaacacgctgaaaagactcgtgttggtttgtggggtcagt 59  Q
    ||||||||||||||||||||||||| |||||||||| ||||    
T  27026725 aaaacacgctgaaaagactcgtgtttgtttgtggggccagt 27026765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 91
Target Start/End: Complemental strand, 44471242 - 44471170
Alignment:
Q  19 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgggatgttaca 91  Q
    |||||| |||| |||||||||||||||||||| |||||||||| |||| || ||||  || |||| |||||||    
T  44471242 aaaacatgctggaaagactcgtgttggtttgtagggtcagtcgacaattcttaaagtcgtttggggtgttaca 44471170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 59
Target Start/End: Complemental strand, 53996047 - 53996007
Alignment:
Q  19 aaaacacgctgaaaagactcgtgttggtttgtggggtcagt 59  Q
    |||||||| ||||||||||||||||||||||| ||||||||    
T  53996047 aaaacacgttgaaaagactcgtgttggtttgtagggtcagt 53996007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 91
Target Start/End: Original strand, 14352025 - 14352090
Alignment:
Q  26 gctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgggatgttaca 91  Q
    ||||||||||||| |||||||||||  |||||||| ||||| || ||||  || ||||||||||||    
T  14352025 gctgaaaagactcatgttggtttgtatggtcagtcagcaatgcttaaagtcgtatgggatgttaca 14352090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 87
Target Start/End: Complemental strand, 23091427 - 23091358
Alignment:
Q  19 aaaacacgctgaaaagactcgtgttggtttgtgggg-tcagtcggcaatcctgaaagcagtctgggatgt 87  Q
    |||||||||| |||| ||| ||||| |||| ||||| ||||||||||| |||||||||||| ||| ||||    
T  23091427 aaaacacgctaaaaaaactagtgttagtttatgggggtcagtcggcaaccctgaaagcagtttggtatgt 23091358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 60
Target Start/End: Complemental strand, 23976135 - 23976094
Alignment:
Q  19 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtc 60  Q
    |||||||||||||||||||  ||||||||| |||||||||||    
T  23976135 aaaacacgctgaaaagactaatgttggtttatggggtcagtc 23976094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 91
Target Start/End: Complemental strand, 9423775 - 9423703
Alignment:
Q  19 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgggatgttaca 91  Q
    |||||||||||||||||||||||||||| |||  |||| || |||||| || ||||   | ||||||||||||    
T  9423775 aaaacacgctgaaaagactcgtgttggtgtgtacggtccgttggcaatgcttaaagtcatttgggatgttaca 9423703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 91
Target Start/End: Original strand, 21067954 - 21068026
Alignment:
Q  19 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgggatgttaca 91  Q
    ||||||| ||||||| | |||||||||||||| || | |||||||||| || ||||   ||||||||||||||    
T  21067954 aaaacacactgaaaaaattcgtgttggtttgtaggcttagtcggcaatgcttaaagtcatctgggatgttaca 21068026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 91
Target Start/End: Complemental strand, 29628571 - 29628499
Alignment:
Q  19 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgggatgttaca 91  Q
    |||| |||||||||| |||||||||| ||||| || |||||||||||| ||  |||  |||||| ||||||||    
T  29628571 aaaatacgctgaaaaaactcgtgttgatttgtaggatcagtcggcaatgctttaagtcgtctggaatgttaca 29628499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 75; Significance: 2e-34; HSPs: 43)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 19 - 93
Target Start/End: Original strand, 14820377 - 14820451
Alignment:
Q  19 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgggatgttacatc 93  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14820377 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgggatgttacatc 14820451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 24 - 91
Target Start/End: Original strand, 16811607 - 16811674
Alignment:
Q  24 acgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgggatgttaca 91  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16811607 acgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgggatgttaca 16811674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 19 - 91
Target Start/End: Original strand, 14814172 - 14814244
Alignment:
Q  19 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgggatgttaca 91  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||    
T  14814172 aaaacacgctgaaaagactcgtgttggtttgtggggttagtcggcaatactgaaagcagtctgggatgttaca 14814244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 19 - 91
Target Start/End: Original strand, 50347969 - 50348041
Alignment:
Q  19 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgggatgttaca 91  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||    
T  50347969 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcgacaatgctgaaagcagtctgggatgttaca 50348041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 19 - 89
Target Start/End: Complemental strand, 11179957 - 11179887
Alignment:
Q  19 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgggatgtta 89  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||    
T  11179957 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcgacaatgctgaaagcagtctgggatgtta 11179887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 19 - 88
Target Start/End: Complemental strand, 13150022 - 13149953
Alignment:
Q  19 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgggatgtt 88  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||    
T  13150022 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcgacaatgctgaaagcagtctgggatgtt 13149953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 19 - 92
Target Start/End: Complemental strand, 31284199 - 31284126
Alignment:
Q  19 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgggatgttacat 92  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||    
T  31284199 aaaacacgccgaaaagactcgtgttggtttgtggggtcagtcggcaatcatgaaagcaatctgggatgttacat 31284126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 19 - 91
Target Start/End: Original strand, 8067503 - 8067575
Alignment:
Q  19 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgggatgttaca 91  Q
    ||||||||||||||||||||||||||||||||| ||||| ||||||||||| |||||||||||||||||||||    
T  8067503 aaaacacgctgaaaagactcgtgttggtttgtgaggtcaatcggcaatcctaaaagcagtctgggatgttaca 8067575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 19 - 91
Target Start/End: Complemental strand, 13150477 - 13150405
Alignment:
Q  19 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgggatgttaca 91  Q
    |||||||||||||||||||||||||| |||||||||||||||| |||| ||||||||||||||||||||||||    
T  13150477 aaaacacgctgaaaagactcgtgttgatttgtggggtcagtcgacaatgctgaaagcagtctgggatgttaca 13150405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 19 - 91
Target Start/End: Original strand, 39653387 - 39653459
Alignment:
Q  19 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgggatgttaca 91  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||| || |||||||||||||||||||||    
T  39653387 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcgacaatgctaaaagcagtctgggatgttaca 39653459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 19 - 92
Target Start/End: Complemental strand, 32227144 - 32227071
Alignment:
Q  19 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgggatgttacat 92  Q
    |||||||  |||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||    
T  32227144 aaaacacattgaaaagactcgtgttggtttgtggggtcagtcgacaatgctgaaagcagtctgggatgttacat 32227071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 19 - 91
Target Start/End: Original strand, 16811148 - 16811220
Alignment:
Q  19 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgggatgttaca 91  Q
    |||| |||||||||||| |||||||||||||||||||| ||||||||||||||||||| ||||||||||||||    
T  16811148 aaaatacgctgaaaagattcgtgttggtttgtggggtcggtcggcaatcctgaaagcaatctgggatgttaca 16811220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 19 - 83
Target Start/End: Complemental strand, 27187252 - 27187188
Alignment:
Q  19 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctggg 83  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||    
T  27187252 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaattctgaaaacagtctggg 27187188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 19 - 91
Target Start/End: Original strand, 28561968 - 28562040
Alignment:
Q  19 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgggatgttaca 91  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||| || |||||||||    
T  28561968 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggtaatcttgaaagcagtatgagatgttaca 28562040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 19 - 81
Target Start/End: Complemental strand, 32386657 - 32386595
Alignment:
Q  19 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctg 81  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  32386657 aaaacacgctaaaaagactcgtgttggtttgtggggtcagtcggcaatcttgaaagcagtctg 32386595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 19 - 91
Target Start/End: Original strand, 32227723 - 32227795
Alignment:
Q  19 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgggatgttaca 91  Q
    |||||||  ||||||||||||||||||||||| |||||||||| |||| ||||||||||||||||||||||||    
T  32227723 aaaacacattgaaaagactcgtgttggtttgtagggtcagtcgacaatgctgaaagcagtctgggatgttaca 32227795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 19 - 91
Target Start/End: Original strand, 41473764 - 41473836
Alignment:
Q  19 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgggatgttaca 91  Q
    |||||||||||||||||| |||||||||||||||||||||||| ||||| |||||||||| || |||||||||    
T  41473764 aaaacacgctgaaaagacccgtgttggtttgtggggtcagtcgccaatcgtgaaagcagtatgagatgttaca 41473836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 19 - 91
Target Start/End: Original strand, 37045255 - 37045327
Alignment:
Q  19 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgggatgttaca 91  Q
    |||||||||||||||||||||||||||||||| |||||||||| |||| || ||||  |||||||||||||||    
T  37045255 aaaacacgctgaaaagactcgtgttggtttgtagggtcagtcgacaatgcttaaagtcgtctgggatgttaca 37045327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 19 - 92
Target Start/End: Complemental strand, 20885040 - 20884967
Alignment:
Q  19 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgggatgttacat 92  Q
    |||||||||||||||||||||||||||||||| ||||||||| ||||| || ||||  || |||||||||||||    
T  20885040 aaaacacgctgaaaagactcgtgttggtttgtagggtcagtctgcaatgcttaaagtcgtttgggatgttacat 20884967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 95 - 249
Target Start/End: Original strand, 45163307 - 45163461
Alignment:
Q  95 gacgccttctccttctcaccggcgggtgcctgcttacgatctaggttgagtttccgcttcagaccggcgtcattgcccgtgttttgttgttagttttcat 194  Q
    ||||||||||| || |||||| ||| |||||| |||||| |||||| | ||| ||  ||||||| |||||| ||| | ||||||||||||| | ||||||    
T  45163307 gacgccttctctttgtcaccgtcggatgcctgtttacgaactaggtagtgttccca-ttcagactggcgtcgttgtctgtgttttgttgttgggtttcat 45163405  T
Q  195 ct-cctttgggtctgtgtttaggtcgatgcctgtttcttggtgaggtggtttggag 249  Q
    || |||||  |||||| ||| |||   |||||||||||||| ||||||||||||||    
T  45163406 cttccttttagtctgtatttgggttactgcctgtttcttggcgaggtggtttggag 45163461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 30 - 91
Target Start/End: Original strand, 25248346 - 25248407
Alignment:
Q  30 aaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgggatgttaca 91  Q
    ||||||||||||||| |||||| ||| ||||| ||||||| |||||||||||||||||||||    
T  25248346 aaaagactcgtgttgatttgtgaggttagtcgacaatcctaaaagcagtctgggatgttaca 25248407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 128 - 192
Target Start/End: Complemental strand, 17501888 - 17501824
Alignment:
Q  128 ttacgatctaggttgagtttccgcttcagaccggcgtcattgcccgtgttttgttgttagttttc 192  Q
    ||||||||||||||| |||||||||||| || | |||||||| ||||||||||||||||| ||||    
T  17501888 ttacgatctaggttgtgtttccgcttcaaactgacgtcattgtccgtgttttgttgttagatttc 17501824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 19 - 91
Target Start/End: Complemental strand, 25231020 - 25230948
Alignment:
Q  19 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgggatgttaca 91  Q
    ||||||||||||||||||||||||||||||||  |||| |||||||||  | ||||  |||||||||||||||    
T  25231020 aaaacacgctgaaaagactcgtgttggtttgtatggtcggtcggcaatggttaaagtcgtctgggatgttaca 25230948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 19 - 91
Target Start/End: Complemental strand, 25238607 - 25238535
Alignment:
Q  19 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgggatgttaca 91  Q
    ||||||||||||||||||||||||||||||||  |||| |||||||||  | ||||  |||||||||||||||    
T  25238607 aaaacacgctgaaaagactcgtgttggtttgtatggtcggtcggcaatggttaaagtcgtctgggatgttaca 25238535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 19 - 91
Target Start/End: Complemental strand, 25239050 - 25238978
Alignment:
Q  19 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgggatgttaca 91  Q
    |||||||||||||||||||||||||||||||| |||||||||| |||| || ||||  || || |||||||||    
T  25239050 aaaacacgctgaaaagactcgtgttggtttgtagggtcagtcgacaatgcttaaagtcgtatgagatgttaca 25238978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 8 - 91
Target Start/End: Original strand, 18318867 - 18318950
Alignment:
Q  8 cgagagagaagaaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgggatgttaca 91  Q
    |||| ||||| ||||||||||||||||| ||| |||||||||| ||| || |||||||||| |||||  ||||| |||||||||    
T  18318867 cgagtgagaacaaaacacgctgaaaagattcgggttggtttgttgggacaatcggcaatccagaaagtcgtctgtgatgttaca 18318950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 19 - 93
Target Start/End: Complemental strand, 4067283 - 4067210
Alignment:
Q  19 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgggatgttacatc 93  Q
    ||||||||||||||||||  |||||||||||| ||||||||||||||| || ||||  |||| ||||||||||||    
T  4067283 aaaacacgctgaaaagaccagtgttggtttgtagggtcagtcggcaatgcttaaagtcgtct-ggatgttacatc 4067210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 8 - 91
Target Start/End: Original strand, 7477403 - 7477486
Alignment:
Q  8 cgagagagaagaaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgggatgttaca 91  Q
    |||| ||||| ||| |||| ||||||||||| ||||||| |||||||||||||| |||| || ||||  |||| ||||||||||    
T  7477403 cgagtgagaacaaagcacgttgaaaagactcatgttggtatgtggggtcagtcgacaattcttaaagtcgtctaggatgttaca 7477486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 8 - 91
Target Start/End: Original strand, 7494093 - 7494176
Alignment:
Q  8 cgagagagaagaaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgggatgttaca 91  Q
    |||| ||||| ||| |||| ||||||||||| ||||||| |||||||||||||| |||| || ||||  |||| ||||||||||    
T  7494093 cgagtgagaacaaagcacgttgaaaagactcatgttggtatgtggggtcagtcgacaattcttaaagtcgtctaggatgttaca 7494176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 19 - 60
Target Start/End: Complemental strand, 25230628 - 25230587
Alignment:
Q  19 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtc 60  Q
    ||||||||||| |||||||||||||||||||| |||||||||    
T  25230628 aaaacacgctggaaagactcgtgttggtttgtagggtcagtc 25230587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 19 - 60
Target Start/End: Complemental strand, 25238215 - 25238174
Alignment:
Q  19 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtc 60  Q
    ||||||||||| |||||||||||||||||||| |||||||||    
T  25238215 aaaacacgctggaaagactcgtgttggtttgtagggtcagtc 25238174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 19 - 92
Target Start/End: Original strand, 30477273 - 30477345
Alignment:
Q  19 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgggatgttacat 92  Q
    ||||||||||||||| |||||||||| ||| || ||||||||  ||||| | |||||||||| |||||||||||    
T  30477273 aaaacacgctgaaaa-actcgtgttgatttatgaggtcagtcaacaatcttaaaagcagtctaggatgttacat 30477345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 97 - 185
Target Start/End: Complemental strand, 1653602 - 1653514
Alignment:
Q  97 cgccttctccttctcaccggcgggtgcctgcttacgatctaggttgagtttccgcttcagaccggcgtcattgcccgtgttttgttgtt 185  Q
    |||||||||||| |||| |||||   |||  ||||||||| |||||  ||| ||||||| |||||||||  ||||||||||||||||||    
T  1653602 cgccttctccttgtcactggcggcaaccttgttacgatctgggttgtcttttcgcttcaaaccggcgtcgatgcccgtgttttgttgtt 1653514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 91
Target Start/End: Original strand, 2911307 - 2911379
Alignment:
Q  19 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgggatgttaca 91  Q
    |||||||| ||||||||||||||||||||||| || ||| ||| |||| || ||||  || ||||||||||||    
T  2911307 aaaacacgttgaaaagactcgtgttggtttgtaggatcaatcgacaatgcttaaagtcgtgtgggatgttaca 2911379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 91
Target Start/End: Original strand, 3900023 - 3900095
Alignment:
Q  19 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgggatgttaca 91  Q
    |||||| | ||||||||||||||||| | ||||||||||||| ||||| ||||||   || ||||||||||||    
T  3900023 aaaacaaggtgaaaagactcgtgttgatctgtggggtcagtcagcaattctgaaaatggtatgggatgttaca 3900095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 65
Target Start/End: Original strand, 26436265 - 26436316
Alignment:
Q  13 gagaagaaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaa 65  Q
    ||||| |||||| ||||||||||||||||||||||| ||||| ||||||||||    
T  26436265 gagaacaaaacatgctgaaaagactcgtgttggtttttgggg-cagtcggcaa 26436316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 91
Target Start/End: Original strand, 30529909 - 30529981
Alignment:
Q  19 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgggatgttaca 91  Q
    |||||||||| |||||||| |||||||||||  |||| |||||||||| || ||||  |||| ||||||||||    
T  30529909 aaaacacgctaaaaagacttgtgttggtttgcagggttagtcggcaatgcttaaagttgtctaggatgttaca 30529981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 79
Target Start/End: Complemental strand, 36763870 - 36763810
Alignment:
Q  19 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtc 79  Q
    |||||||||||| ||||||| ||||||||||||| | |||| ||||| ||| |||||||||    
T  36763870 aaaacacgctgataagactcatgttggtttgtggagacagttggcaaacctaaaagcagtc 36763810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 34 - 91
Target Start/End: Complemental strand, 18547475 - 18547418
Alignment:
Q  34 gactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgggatgttaca 91  Q
    ||||||||||||||||| ||||||||||||||| || ||||  |  ||||||||||||    
T  18547475 gactcgtgttggtttgtagggtcagtcggcaatgcttaaagtcgattgggatgttaca 18547418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 60
Target Start/End: Complemental strand, 25802471 - 25802430
Alignment:
Q  19 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtc 60  Q
    ||||||||||||||||||  |||||||||||| |||||||||    
T  25802471 aaaacacgctgaaaagacgtgtgttggtttgtagggtcagtc 25802430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 91
Target Start/End: Complemental strand, 25230171 - 25230099
Alignment:
Q  19 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgggatgttaca 91  Q
    |||||||| || ||||||| |||||||||||| |||||||||| |||| || ||||  || || |||||||||    
T  25230171 aaaacacgttggaaagactagtgttggtttgtagggtcagtcgacaatgcttaaagtcgtttgagatgttaca 25230099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 91
Target Start/End: Complemental strand, 25237758 - 25237686
Alignment:
Q  19 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgggatgttaca 91  Q
    |||||||| || ||||||| |||||||||||| |||||||||| |||| || ||||  || || |||||||||    
T  25237758 aaaacacgttggaaagactagtgttggtttgtagggtcagtcgacaatgcttaaagtcgtttgagatgttaca 25237686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 53150735 - 53150683
Alignment:
Q  19 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctga 71  Q
    |||||| | ||||||||||| |||| ||||||||||||||||  |||||||||    
T  53150735 aaaacatgttgaaaagactcatgttagtttgtggggtcagtcaacaatcctga 53150683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0322 (Bit Score: 73; Significance: 3e-33; HSPs: 1)
Name: scaffold0322
Description:

Target: scaffold0322; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 19 - 91
Target Start/End: Original strand, 19189 - 19261
Alignment:
Q  19 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgggatgttaca 91  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19189 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgggatgttaca 19261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 73; Significance: 3e-33; HSPs: 36)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 19 - 91
Target Start/End: Complemental strand, 17027454 - 17027382
Alignment:
Q  19 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgggatgttaca 91  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17027454 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgggatgttaca 17027382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 19 - 91
Target Start/End: Original strand, 7912101 - 7912173
Alignment:
Q  19 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgggatgttaca 91  Q
    ||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  7912101 aaaacacgctgaaaagacttgtgttggtttgtggggtcagtcgacaatcctgaaagcagtctgggatgttaca 7912173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 19 - 91
Target Start/End: Original strand, 9352285 - 9352357
Alignment:
Q  19 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgggatgttaca 91  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  9352285 aaaacatgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgggacgttaca 9352357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 19 - 91
Target Start/End: Original strand, 20850544 - 20850616
Alignment:
Q  19 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgggatgttaca 91  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||    
T  20850544 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtatggggtgttaca 20850616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 19 - 91
Target Start/End: Original strand, 23776663 - 23776735
Alignment:
Q  19 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgggatgttaca 91  Q
    ||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  23776663 aaaacacgctgaaaagattcgtgttggtttgtggagtcagtcggcaatcctgaaagcagtctgggatgttaca 23776735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 19 - 91
Target Start/End: Complemental strand, 2681143 - 2681071
Alignment:
Q  19 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgggatgttaca 91  Q
    |||||||| ||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  2681143 aaaacacgttgagaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagctgtctgggatgttaca 2681071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 19 - 91
Target Start/End: Original strand, 13492556 - 13492628
Alignment:
Q  19 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgggatgttaca 91  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| || |||||||    
T  13492556 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcttgaaagcagtctagggtgttaca 13492628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 19 - 91
Target Start/End: Complemental strand, 20896610 - 20896538
Alignment:
Q  19 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgggatgttaca 91  Q
    ||||||| |||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||    
T  20896610 aaaacacactgaaaagactcgtgttggtttgtggggtcagccggcaatcttgaaagcagtctgggatgttaca 20896538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 8 - 91
Target Start/End: Complemental strand, 23986251 - 23986168
Alignment:
Q  8 cgagagagaagaaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgggatgttaca 91  Q
    |||| ||| |||| |||||||||||||||| |||||||||||||||||||||||||||| ||||||||||| ||||||||||||    
T  23986251 cgagtgaggagaagacacgctgaaaagacttgtgttggtttgtggggtcagtcggcaattctgaaagcagtatgggatgttaca 23986168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 19 - 88
Target Start/End: Original strand, 7912533 - 7912602
Alignment:
Q  19 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgggatgtt 88  Q
    |||||||||||||||||||| |||||||||||||||| |||||||||||||||||||| |||||||||||    
T  7912533 aaaacacgctgaaaagactcatgttggtttgtggggttagtcggcaatcctgaaagcaatctgggatgtt 7912602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 19 - 91
Target Start/End: Complemental strand, 9440780 - 9440708
Alignment:
Q  19 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgggatgttaca 91  Q
    |||| |||||||||| ||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||    
T  9440780 aaaatacgctgaaaaaactcgtgctggtttgtggggtcagtcggcaatcttgaaagcagtctgggatgttaca 9440708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 27 - 91
Target Start/End: Complemental strand, 13191428 - 13191364
Alignment:
Q  27 ctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgggatgttaca 91  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||    
T  13191428 ctgaaaagactcgtgttggtttgtggggtcagtcggcaatcttgaaagcagtctggggtgttaca 13191364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 19 - 91
Target Start/End: Complemental strand, 6331291 - 6331219
Alignment:
Q  19 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgggatgttaca 91  Q
    |||||| |||| |||||||||||||||||||| |||||||||||||||| ||||||||||||| |||||||||    
T  6331291 aaaacatgctggaaagactcgtgttggtttgtagggtcagtcggcaatcttgaaagcagtctgagatgttaca 6331219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 19 - 91
Target Start/End: Original strand, 13493013 - 13493085
Alignment:
Q  19 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgggatgttaca 91  Q
    |||||| ||||||||||||||||||| ||||| ||||||||| |||||||||||||||||||||| |||||||    
T  13493013 aaaacatgctgaaaagactcgtgttgatttgtagggtcagtcagcaatcctgaaagcagtctggggtgttaca 13493085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 28 - 91
Target Start/End: Original strand, 28780342 - 28780405
Alignment:
Q  28 tgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgggatgttaca 91  Q
    ||||||||||||||||||||||||||||||| || |||| ||||||||||||||||||||||||    
T  28780342 tgaaaagactcgtgttggtttgtggggtcagccgacaatgctgaaagcagtctgggatgttaca 28780405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 19 - 91
Target Start/End: Original strand, 15929362 - 15929434
Alignment:
Q  19 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgggatgttaca 91  Q
    |||| ||||| |||||||| |||||| |||||||||||| ||||||||||| |||||||||||||||||||||    
T  15929362 aaaatacgctaaaaagacttgtgttgatttgtggggtcactcggcaatccttaaagcagtctgggatgttaca 15929434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 19 - 91
Target Start/End: Complemental strand, 17731032 - 17730960
Alignment:
Q  19 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgggatgttaca 91  Q
    |||||||||| ||||||||||||||||||||| |||||||||| ||||||||| ||  |||| ||||||||||    
T  17731032 aaaacacgctaaaaagactcgtgttggtttgtagggtcagtcgacaatcctgagagtcgtctaggatgttaca 17730960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 19 - 93
Target Start/End: Original strand, 27334316 - 27334390
Alignment:
Q  19 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgggatgttacatc 93  Q
    |||||||||||||||||||||||||| |||||||||||||||| ||||| |  | ||| ||||| ||||||||||    
T  27334316 aaaacacgctgaaaagactcgtgttgatttgtggggtcagtcgacaatcttagatgcaatctggaatgttacatc 27334390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 19 - 93
Target Start/End: Original strand, 27395056 - 27395130
Alignment:
Q  19 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgggatgttacatc 93  Q
    |||||||||||||||||||||||||| |||||||||||||||| ||||| |  | ||| ||||| ||||||||||    
T  27395056 aaaacacgctgaaaagactcgtgttgatttgtggggtcagtcgacaatcttagatgcaatctggaatgttacatc 27395130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 19 - 66
Target Start/End: Complemental strand, 2891217 - 2891170
Alignment:
Q  19 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaat 66  Q
    ||||||||||||||||| |||||||||||||| |||||||||||||||    
T  2891217 aaaacacgctgaaaagattcgtgttggtttgtagggtcagtcggcaat 2891170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 19 - 89
Target Start/End: Original strand, 3653121 - 3653191
Alignment:
Q  19 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgggatgtta 89  Q
    |||||||||||||||||||||| ||||||||| |||||| |||||||| || |||   |||||||||||||    
T  3653121 aaaacacgctgaaaagactcgtattggtttgtagggtcaatcggcaatgcttaaaatcgtctgggatgtta 3653191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 27 - 81
Target Start/End: Original strand, 28583195 - 28583249
Alignment:
Q  27 ctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctg 81  Q
    |||||||||||| |||| |||||||||||||||||||||||  ||||||||||||    
T  28583195 ctgaaaagactcatgttagtttgtggggtcagtcggcaatctcgaaagcagtctg 28583249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 19 - 91
Target Start/End: Complemental strand, 20126105 - 20126033
Alignment:
Q  19 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgggatgttaca 91  Q
    ||||||| |||||||||||||||||||||||| ||||| |||| |||| || ||||  |||||||| ||||||    
T  20126105 aaaacacactgaaaagactcgtgttggtttgtagggtccgtcgacaatgcttaaagtcgtctgggacgttaca 20126033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 19 - 91
Target Start/End: Original strand, 21311738 - 21311810
Alignment:
Q  19 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgggatgttaca 91  Q
    ||||||||||| || ||||||||||||||||| |||||| ||| |||| || ||||  |||||||||||||||    
T  21311738 aaaacacgctgtaaggactcgtgttggtttgtagggtcaatcgacaatgcttaaagtcgtctgggatgttaca 21311810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 19 - 91
Target Start/End: Original strand, 21312194 - 21312266
Alignment:
Q  19 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgggatgttaca 91  Q
    |||||||  |||||||||| |||||||||||| |||||||||| |||| || ||||  |||||||||||||||    
T  21312194 aaaacacattgaaaagactggtgttggtttgtagggtcagtcgacaatgcttaaagtcgtctgggatgttaca 21312266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 19 - 66
Target Start/End: Complemental strand, 2890762 - 2890715
Alignment:
Q  19 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaat 66  Q
    |||||||||| ||||||||||||||||||||| |||||||||| ||||    
T  2890762 aaaacacgctaaaaagactcgtgttggtttgtagggtcagtcgacaat 2890715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 19 - 78
Target Start/End: Original strand, 20735918 - 20735977
Alignment:
Q  19 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagt 78  Q
    |||||||||| |||||||| | || |||||||||||||||| | ||||||||||||||||    
T  20735918 aaaacacgctaaaaagacttgcgtcggtttgtggggtcagttgacaatcctgaaagcagt 20735977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 19 - 66
Target Start/End: Complemental strand, 31416011 - 31415965
Alignment:
Q  19 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaat 66  Q
    ||||||||||||||||| ||||||||||||||||| ||||||||||||    
T  31416011 aaaacacgctgaaaaga-tcgtgttggtttgtgggatcagtcggcaat 31415965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 8 - 66
Target Start/End: Complemental strand, 2720497 - 2720439
Alignment:
Q  8 cgagagagaagaaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaat 66  Q
    |||| ||||| |||||||||||| ||||||||||| ||||||  |||||||||||||||    
T  2720497 cgagtgagaacaaaacacgctgagaagactcgtgtcggtttgcagggtcagtcggcaat 2720439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 26 - 91
Target Start/End: Original strand, 21312468 - 21312533
Alignment:
Q  26 gctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgggatgttaca 91  Q
    |||||||||||| |||||||||||| |||||||||| ||||  | ||||  |||||||||||||||    
T  21312468 gctgaaaagactggtgttggtttgtagggtcagtcgacaatggttaaagtcgtctgggatgttaca 21312533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 39 - 91
Target Start/End: Original strand, 20732820 - 20732872
Alignment:
Q  39 gtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgggatgttaca 91  Q
    ||||||||||||||||||| || ||||||||||||||| | || |||||||||    
T  20732820 gtgttggtttgtggggtcattcagcaatcctgaaagcattatgtgatgttaca 20732872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 19 - 69
Target Start/End: Original strand, 11062052 - 11062102
Alignment:
Q  19 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcct 69  Q
    |||||||||| |||| |||||||||||||||| |||| |||||| ||||||    
T  11062052 aaaacacgctaaaaaaactcgtgttggtttgtagggttagtcggtaatcct 11062102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 19 - 89
Target Start/End: Complemental strand, 21557421 - 21557351
Alignment:
Q  19 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgggatgtta 89  Q
    |||||||  |||||||||||||||||||||  ||||| |||||| |||||| |||||| ||| || |||||    
T  21557421 aaaacacattgaaaagactcgtgttggttttgggggtaagtcggtaatcctaaaagcaatctaggctgtta 21557351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 91
Target Start/End: Original strand, 3652753 - 3652818
Alignment:
Q  26 gctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgggatgttaca 91  Q
    ||||||||||||| ||||||||||| |||||||| | |||| || ||||  ||||| |||||||||    
T  3652753 gctgaaaagactcttgttggtttgtagggtcagttgacaatgcttaaagttgtctgagatgttaca 3652818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 29 - 66
Target Start/End: Original strand, 17851151 - 17851188
Alignment:
Q  29 gaaaagactcgtgttggtttgtggggtcagtcggcaat 66  Q
    |||||||||||||||||||||| |||||| ||||||||    
T  17851151 gaaaagactcgtgttggtttgtagggtcaatcggcaat 17851188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 32 - 92
Target Start/End: Complemental strand, 31821702 - 31821642
Alignment:
Q  32 aagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgggatgttacat 92  Q
    |||||||||||||||||||  |||||||||||||| || ||||   | |||||||||||||    
T  31821702 aagactcgtgttggtttgtatggtcagtcggcaatgcttaaagtcatatgggatgttacat 31821642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 73; Significance: 3e-33; HSPs: 36)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 19 - 91
Target Start/End: Complemental strand, 32377830 - 32377758
Alignment:
Q  19 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgggatgttaca 91  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32377830 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgggatgttaca 32377758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 19 - 89
Target Start/End: Original strand, 30966457 - 30966527
Alignment:
Q  19 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgggatgtta 89  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30966457 aaaacacgttgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgggatgtta 30966527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 19 - 91
Target Start/End: Original strand, 30966913 - 30966985
Alignment:
Q  19 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgggatgttaca 91  Q
    |||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  30966913 aaaacacgttgaaaagactcgtgttggtttgtggagtcagtcggcaatcctgaaagcagtctgggatgttaca 30966985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 19 - 91
Target Start/End: Complemental strand, 25337920 - 25337848
Alignment:
Q  19 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgggatgttaca 91  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||| |||||||||    
T  25337920 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcgacaatgctgaaagcagtctgagatgttaca 25337848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 19 - 91
Target Start/End: Original strand, 33175179 - 33175251
Alignment:
Q  19 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgggatgttaca 91  Q
    ||||||||||| ||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||    
T  33175179 aaaacacgctggaaagactcgtgttagtttgtagggtcagtcggcaatcctgaaagcagtctgggatgttaca 33175251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 8 - 91
Target Start/End: Complemental strand, 5399751 - 5399668
Alignment:
Q  8 cgagagagaagaaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgggatgttaca 91  Q
    |||| ||||| ||||||||||| ||||||| ||||||||||||||||||||||| ||||||| |||||||||||||||||||||    
T  5399751 cgagtgagaacaaaacacgctggaaagacttgtgttggtttgtggggtcagtcgacaatcctaaaagcagtctgggatgttaca 5399668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 20 - 91
Target Start/End: Original strand, 29804871 - 29804942
Alignment:
Q  20 aaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgggatgttaca 91  Q
    |||||||||||||||||||||||||||||||||| ||||||| |||| ||||||||||||||||||||||||    
T  29804871 aaacacgctgaaaagactcgtgttggtttgtgggatcagtcgacaatgctgaaagcagtctgggatgttaca 29804942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 92 - 247
Target Start/End: Original strand, 2062212 - 2062368
Alignment:
Q  92 tcggacgccttctccttctcaccggcgggtgcctgcttacgatctaggttgagtttccgcttcagaccggcgtcattgcccgtgttttgttgttagtttt 191  Q
    ||||||||||||||||| || |||| || | |||| ||||||||| ||||| ||||||||||||||||||||||  |||||||||||||||||| | ||     
T  2062212 tcggacgccttctccttgtctccggtggatacctgtttacgatctgggttgtgtttccgcttcagaccggcgtcgctgcccgtgttttgttgttgggttg 2062311  T
Q  192 catc-tcctttgggtctgtgtttaggtcgatgcctgtttcttggtgaggtggtttgg 247  Q
    |||| | || | | |||||||||  || | | || ||||||||||||||||||||||    
T  2062312 catctttctcttgatctgtgtttgtgtagcttccagtttcttggtgaggtggtttgg 2062368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 19 - 91
Target Start/End: Original strand, 24818548 - 24818620
Alignment:
Q  19 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgggatgttaca 91  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||| ||||||| |||| |||||||||||    
T  24818548 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcgacaatgctgaaagtagtcggggatgttaca 24818620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 19 - 83
Target Start/End: Complemental strand, 32377639 - 32377575
Alignment:
Q  19 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctggg 83  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||    
T  32377639 aaaacacgctgaaaaaactcgtgttggtttgtggggtcagtcggcaatcctaaaagcagtctggg 32377575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 19 - 91
Target Start/End: Original strand, 33771224 - 33771296
Alignment:
Q  19 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgggatgttaca 91  Q
    ||||||| |||||||||||||||||||||||||||||||| ||||||| ||||||||| ||||||||||||||    
T  33771224 aaaacacactgaaaagactcgtgttggtttgtggggtcagccggcaattctgaaagcaatctgggatgttaca 33771296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 19 - 91
Target Start/End: Original strand, 1912747 - 1912819
Alignment:
Q  19 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgggatgttaca 91  Q
    |||||||| ||||||||||||||||||||||| | ||||||||||||| || ||||  |||||||||||||||    
T  1912747 aaaacacgttgaaaagactcgtgttggtttgtagagtcagtcggcaatgcttaaagtcgtctgggatgttaca 1912819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 19 - 91
Target Start/End: Original strand, 15639957 - 15640029
Alignment:
Q  19 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgggatgttaca 91  Q
    ||||||||| ||||||||||||||||||| || ||||||||||||||| || ||||  |||||||||||||||    
T  15639957 aaaacacgcagaaaagactcgtgttggttggtagggtcagtcggcaatgcttaaagtcgtctgggatgttaca 15640029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 19 - 91
Target Start/End: Complemental strand, 25433979 - 25433907
Alignment:
Q  19 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgggatgttaca 91  Q
    ||||||||||||||||| |||||||||||||| ||||||||||||||| || ||||   ||||||||||||||    
T  25433979 aaaacacgctgaaaagattcgtgttggtttgtagggtcagtcggcaatgcttaaagtcatctgggatgttaca 25433907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 19 - 91
Target Start/End: Complemental strand, 30963186 - 30963114
Alignment:
Q  19 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgggatgttaca 91  Q
    |||| ||| |||||||||||||||||||||||| ||||| ||||||||| |||||||||| | ||||||||||    
T  30963186 aaaatacgttgaaaagactcgtgttggtttgtgaggtcaatcggcaatcatgaaagcagttttggatgttaca 30963114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 19 - 90
Target Start/End: Original strand, 20502187 - 20502258
Alignment:
Q  19 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgggatgttac 90  Q
    ||||||||||||||||||||||||| |||||| |||||||||||||||  | ||||  ||||||||||||||    
T  20502187 aaaacacgctgaaaagactcgtgttagtttgtagggtcagtcggcaatttttaaagttgtctgggatgttac 20502258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 19 - 91
Target Start/End: Original strand, 16379160 - 16379232
Alignment:
Q  19 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgggatgttaca 91  Q
    |||||||||||||||||||||||||||||||| |||||||||| |||| || ||||  || ||| ||||||||    
T  16379160 aaaacacgctgaaaagactcgtgttggtttgtagggtcagtcgacaatgcttaaagttgtttggaatgttaca 16379232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 21 - 87
Target Start/End: Original strand, 1952926 - 1952992
Alignment:
Q  21 aacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgggatgt 87  Q
    |||||||| ||||||| ||||||||||||||||||||||||||| |||| |||  |||||| |||||    
T  1952926 aacacgctaaaaagacccgtgttggtttgtggggtcagtcggcactcctaaaaatagtctgagatgt 1952992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 8 - 74
Target Start/End: Original strand, 11389695 - 11389761
Alignment:
Q  8 cgagagagaagaaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaag 74  Q
    |||| ||||| |||||| |||||||| |||| |||||||||||||||||||||| ||||||| ||||    
T  11389695 cgagtgagaataaaacatgctgaaaaaactcatgttggtttgtggggtcagtcgacaatcctaaaag 11389761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 8 - 74
Target Start/End: Original strand, 11406356 - 11406422
Alignment:
Q  8 cgagagagaagaaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaag 74  Q
    |||| ||||| |||||| |||||||| |||| |||||||||||||||||||||| ||||||| ||||    
T  11406356 cgagtgagaataaaacatgctgaaaaaactcatgttggtttgtggggtcagtcgacaatcctaaaag 11406422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 132 - 185
Target Start/End: Complemental strand, 31903035 - 31902982
Alignment:
Q  132 gatctaggttgagtttccgcttcagaccggcgtcattgcccgtgttttgttgtt 185  Q
    ||||||||||| |||||||||||| |||||||||  ||||||||||||||||||    
T  31903035 gatctaggttgtgtttccgcttcaaaccggcgtcgctgcccgtgttttgttgtt 31902982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 19 - 91
Target Start/End: Original strand, 83240 - 83312
Alignment:
Q  19 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgggatgttaca 91  Q
    |||||||| ||| ||||||  |||||||||||||||| | ||||||||| |||||| |||||| |||||||||    
T  83240 aaaacacgttgataagacttatgttggtttgtggggttattcggcaatcatgaaagtagtctgagatgttaca 83312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 19 - 91
Target Start/End: Original strand, 16379616 - 16379688
Alignment:
Q  19 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgggatgttaca 91  Q
    |||||||||||||||||||||||||||||||| |||||| ||| |||| || ||||  |||| | ||||||||    
T  16379616 aaaacacgctgaaaagactcgtgttggtttgtagggtcattcgacaatgcttaaagttgtctcgaatgttaca 16379688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 324 - 381
Target Start/End: Original strand, 27739352 - 27739409
Alignment:
Q  324 ttgctgctttccttggtgactttcaaccttgttgtcttgcgcttgtgtctgttgatcc 381  Q
    |||||||||||||||| |||||| | |||||||||||||| ||||||  |||||||||    
T  27739352 ttgctgctttccttggagactttaagccttgttgtcttgctcttgtgcttgttgatcc 27739409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 19 - 80
Target Start/End: Complemental strand, 30961806 - 30961745
Alignment:
Q  19 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtct 80  Q
    |||||||  |||||||||| ||||| ||||||||||||| ||||||||| |||||| |||||    
T  30961806 aaaacacagtgaaaagacttgtgttagtttgtggggtcaatcggcaatcatgaaaggagtct 30961745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 19 - 92
Target Start/End: Original strand, 37552788 - 37552861
Alignment:
Q  19 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgggatgttacat 92  Q
    |||||||||| |||| || ||||||||||||| |||||||||| || || ||||||| ||| | ||||||||||    
T  37552788 aaaacacgcttaaaatacccgtgttggtttgtagggtcagtcgacagtcttgaaagctgtcggagatgttacat 37552861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 91
Target Start/End: Original strand, 1707264 - 1707336
Alignment:
Q  19 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgggatgttaca 91  Q
    |||||||||| |||||| ||| |||| ||| | ||||||||||||||| || ||||  |||||||||||||||    
T  1707264 aaaacacgctaaaaagattcgcgttgatttatagggtcagtcggcaatgcttaaagtcgtctgggatgttaca 1707336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 91
Target Start/End: Original strand, 13191197 - 13191269
Alignment:
Q  19 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgggatgttaca 91  Q
    |||||||||| |||||||| |||||||||| ||| |||||||| ||||| ||||||   | ||||||||||||    
T  13191197 aaaacacgctaaaaagactagtgttggtttatggagtcagtcgacaatcttgaaagtcatatgggatgttaca 13191269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 293 - 369
Target Start/End: Complemental strand, 25505474 - 25505399
Alignment:
Q  293 tggttgcttctttagaatgctttggggatgcttgctgctttccttggtgactttcaaccttgttgtcttgcgcttgt 369  Q
    ||||||| |||||| |||||| ||| |||| ||| ||||| |||||| |||||||||| |||||||||||| |||||    
T  25505474 tggttgcctctttataatgctatggcgatg-ttgttgcttaccttggagactttcaactttgttgtcttgctcttgt 25505399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 19 - 58
Target Start/End: Complemental strand, 29259543 - 29259504
Alignment:
Q  19 aaaacacgctgaaaagactcgtgttggtttgtggggtcag 58  Q
    |||||||| |||||||||||||||||||||||||| ||||    
T  29259543 aaaacacgttgaaaagactcgtgttggtttgtgggatcag 29259504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 19 - 91
Target Start/End: Complemental strand, 30963643 - 30963569
Alignment:
Q  19 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggca--atcctgaaagcagtctgggatgttaca 91  Q
    |||||||  ||||||||||||| |||||||||||| ||||||||||   ||||||||| ||||| || |||||||    
T  30963643 aaaacacagtgaaaagactcgttttggtttgtgggatcagtcggcactttcctgaaagaagtcttgggtgttaca 30963569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 19 - 49
Target Start/End: Complemental strand, 8181284 - 8181254
Alignment:
Q  19 aaaacacgctgaaaagactcgtgttggtttg 49  Q
    |||||||||||||||||||||||||||||||    
T  8181284 aaaacacgctgaaaagactcgtgttggtttg 8181254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 26 - 76
Target Start/End: Complemental strand, 26865169 - 26865119
Alignment:
Q  26 gctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagca 76  Q
    ||||||||||  |||||||||||||||||||| |||| |||||| ||||||    
T  26865169 gctgaaaagatccgtgttggtttgtggggtcattcggaaatcctaaaagca 26865119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 185
Target Start/End: Original strand, 16959313 - 16959354
Alignment:
Q  144 gtttccgcttcagaccggcgtcattgcccgtgttttgttgtt 185  Q
    ||||| ||||||||||||||||  ||||||||||||||||||    
T  16959313 gtttctgcttcagaccggcgtcgatgcccgtgttttgttgtt 16959354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 64
Target Start/End: Complemental strand, 36924404 - 36924359
Alignment:
Q  19 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggca 64  Q
    ||||||||||| |||||||||||||||||||| | || ||||||||    
T  36924404 aaaacacgctggaaagactcgtgttggtttgtagagttagtcggca 36924359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 138 - 198
Target Start/End: Original strand, 29486399 - 29486459
Alignment:
Q  138 ggttgagtttccgcttcagaccggcgtcattgcccgtgttttgttgttagttttcatctcc 198  Q
    ||||| ||||||||||||||||||||||  |||||  ||||||||||| | |||| |||||    
T  29486399 ggttgtgtttccgcttcagaccggcgtcgctgcccaagttttgttgtttggtttcgtctcc 29486459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0389 (Bit Score: 69; Significance: 8e-31; HSPs: 1)
Name: scaffold0389
Description:

Target: scaffold0389; HSP #1
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 19 - 91
Target Start/End: Complemental strand, 13456 - 13384
Alignment:
Q  19 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgggatgttaca 91  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  13456 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtccgggatgttaca 13384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0243 (Bit Score: 65; Significance: 2e-28; HSPs: 1)
Name: scaffold0243
Description:

Target: scaffold0243; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 19 - 91
Target Start/End: Original strand, 1443 - 1515
Alignment:
Q  19 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgggatgttaca 91  Q
    |||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||    
T  1443 aaaacacgctgaaaagactcgtgttggtttgtggcgtcagtcgacaatcctgaaagcagtctgggatgttaca 1515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 65; Significance: 2e-28; HSPs: 5)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 19 - 91
Target Start/End: Complemental strand, 163057 - 162985
Alignment:
Q  19 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgggatgttaca 91  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||    
T  163057 aaaacacgctgaaaagactcgtgttggtttgtggggccagtcggcaatcctgaaaacagtctgggatgttaca 162985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 19 - 88
Target Start/End: Complemental strand, 162601 - 162531
Alignment:
Q  19 aaaacacgctgaaaa-gactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgggatgtt 88  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  162601 aaaacacgctgaaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtatgggatgtt 162531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #3
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 23 - 92
Target Start/End: Complemental strand, 69734 - 69665
Alignment:
Q  23 cacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgggatgttacat 92  Q
    |||||| ||||||||||||||||||||| || |||||||||||||||||||||||| |||||||||||||    
T  69734 cacgctaaaaagactcgtgttggtttgttggttcagtcggcaatcctgaaagcagtttgggatgttacat 69665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #4
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 19 - 91
Target Start/End: Original strand, 163294 - 163366
Alignment:
Q  19 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgggatgttaca 91  Q
    |||||||||||||||||||||||||||||||| ||||| |||| ||||||||||||  |||||||||||||||    
T  163294 aaaacacgctgaaaagactcgtgttggtttgtagggtctgtcgacaatcctgaaagtcgtctgggatgttaca 163366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 40 - 91
Target Start/End: Complemental strand, 162534 - 162483
Alignment:
Q  40 tgttggtttgtggggtcagtcggcaatcctgaaagcagtctgggatgttaca 91  Q
    |||||||||||||||||||||||||||||| |||||| |||| |||||||||    
T  162534 tgttggtttgtggggtcagtcggcaatcctaaaagcaatctgagatgttaca 162483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 62; Significance: 1e-26; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 19 - 88
Target Start/End: Original strand, 154980 - 155049
Alignment:
Q  19 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgggatgtt 88  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||    
T  154980 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcgacaatgctgaaagcagtctgggatgtt 155049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 19 - 91
Target Start/End: Original strand, 154525 - 154597
Alignment:
Q  19 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgggatgttaca 91  Q
    |||||||||||||||||||||||||| |||||||||||||||| |||| ||||||||||||||||||||||||    
T  154525 aaaacacgctgaaaagactcgtgttgatttgtggggtcagtcgacaatgctgaaagcagtctgggatgttaca 154597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1519 (Bit Score: 61; Significance: 5e-26; HSPs: 1)
Name: scaffold1519
Description:

Target: scaffold1519; HSP #1
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 19 - 91
Target Start/End: Complemental strand, 1624 - 1552
Alignment:
Q  19 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgggatgttaca 91  Q
    |||||||||| ||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||    
T  1624 aaaacacgctaaaaagactcgtgttggtttgtggggtcagtcgataatcctgaaagcagtctgggatgttaca 1552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217 (Bit Score: 61; Significance: 5e-26; HSPs: 1)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 19 - 91
Target Start/End: Original strand, 533 - 605
Alignment:
Q  19 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgggatgttaca 91  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||| ||||||||||    
T  533 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctaaaagtagtctcggatgttaca 605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 61; Significance: 5e-26; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 19 - 91
Target Start/End: Original strand, 2965 - 3037
Alignment:
Q  19 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgggatgttaca 91  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||| ||||||||||    
T  2965 aaaacacgctgaaaagactcgtgttgatttgtggggtcagtcggcaatgctgaaagcagtctcggatgttaca 3037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 61; Significance: 5e-26; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 19 - 91
Target Start/End: Complemental strand, 107386 - 107314
Alignment:
Q  19 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgggatgttaca 91  Q
    |||||| |||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||    
T  107386 aaaacatgctgaaaagactcgtgttggtttgtggggtcagtcggctattctgaaagcagtctgggatgttaca 107314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0277 (Bit Score: 57; Significance: 1e-23; HSPs: 1)
Name: scaffold0277
Description:

Target: scaffold0277; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 19 - 91
Target Start/End: Complemental strand, 14625 - 14553
Alignment:
Q  19 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgggatgttaca 91  Q
    |||||| ||||||||||||||||||||||||||||||||| || |||| ||||||||||||||||||||||||    
T  14625 aaaacatgctgaaaagactcgtgttggtttgtggggtcagccgacaatgctgaaagcagtctgggatgttaca 14553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 57; Significance: 1e-23; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 19 - 91
Target Start/End: Original strand, 105943 - 106015
Alignment:
Q  19 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgggatgttaca 91  Q
    |||||||||||||||||||||||||||||| | ||||||||||||||| |||||||||||||| |||||||||    
T  105943 aaaacacgctgaaaagactcgtgttggtttatagggtcagtcggcaattctgaaagcagtctgagatgttaca 106015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 57; Significance: 1e-23; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 19 - 91
Target Start/End: Original strand, 10522 - 10594
Alignment:
Q  19 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgggatgttaca 91  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||| ||||||| |||| |||||||||||    
T  10522 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcgacaatgctgaaagtagtcggggatgttaca 10594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0557 (Bit Score: 56; Significance: 5e-23; HSPs: 1)
Name: scaffold0557
Description:

Target: scaffold0557; HSP #1
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 8 - 91
Target Start/End: Original strand, 2308 - 2391
Alignment:
Q  8 cgagagagaagaaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgggatgttaca 91  Q
    |||| ||| |||||||||||||||||||||||||||||||||| || ||||||| ||||||| ||||||||||||||| |||||    
T  2308 cgagtgaggagaaaacacgctgaaaagactcgtgttggtttgtaggatcagtcgacaatcctaaaagcagtctgggattttaca 2391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065 (Bit Score: 55; Significance: 2e-22; HSPs: 2)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 19 - 81
Target Start/End: Complemental strand, 63030 - 62968
Alignment:
Q  19 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctg 81  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||    
T  63030 aaaacacgctgaaaagactcgtattggtttgtggggtcagtcggcaatcctgaaagtagtctg 62968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065; HSP #2
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 19 - 91
Target Start/End: Complemental strand, 67286 - 67214
Alignment:
Q  19 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgggatgttaca 91  Q
    |||| ||||| |||| ||| ||||||||||||||||||| ||||||||||||||||||||||| |||||||||    
T  67286 aaaagacgctaaaaacacttgtgttggtttgtggggtcaatcggcaatcctgaaagcagtctgtgatgttaca 67214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 53; Significance: 3e-21; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 19 - 83
Target Start/End: Original strand, 245305 - 245369
Alignment:
Q  19 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctggg 83  Q
    |||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||| ||||    
T  245305 aaaacacggtgaaaagactcgtgttggtttgcggggtcagtcggcaatcctgaaagcagtatggg 245369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 19 - 79
Target Start/End: Original strand, 245771 - 245831
Alignment:
Q  19 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtc 79  Q
    |||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  245771 aaaacacgttgaaaagactcgtgttggtttgtggggtcagtcgggaatcctgaaagcagtc 245831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0442 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold0442
Description:

Target: scaffold0442; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 22 - 89
Target Start/End: Original strand, 1 - 68
Alignment:
Q  22 acacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgggatgtta 89  Q
    ||||||||||||||||||||||||||||| |||||||| ||||||||| |||||||| ||||||||||    
T  1 acacgctgaaaagactcgtgttggtttgtagggtcagtaggcaatcctaaaagcagtttgggatgtta 68  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 51; Significance: 4e-20; HSPs: 1)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 19 - 93
Target Start/End: Complemental strand, 2133 - 2059
Alignment:
Q  19 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgggatgttacatc 93  Q
    |||||||  |||||||||||||||||||||||||||||||||| ||||||| ||||  |||||||||||||||||    
T  2133 aaaacacattgaaaagactcgtgttggtttgtggggtcagtcgacaatcctaaaagttgtctgggatgttacatc 2059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0499 (Bit Score: 49; Significance: 7e-19; HSPs: 1)
Name: scaffold0499
Description:

Target: scaffold0499; HSP #1
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 19 - 91
Target Start/End: Complemental strand, 1974 - 1902
Alignment:
Q  19 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgggatgttaca 91  Q
    |||| |||||||||||||||||||||||||||||||||||||| ||||||| ||||  || ||||||||||||    
T  1974 aaaatacgctgaaaagactcgtgttggtttgtggggtcagtcgacaatcctaaaagtcgtttgggatgttaca 1902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0333 (Bit Score: 49; Significance: 7e-19; HSPs: 3)
Name: scaffold0333
Description:

Target: scaffold0333; HSP #1
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 19 - 91
Target Start/End: Original strand, 5243 - 5315
Alignment:
Q  19 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgggatgttaca 91  Q
    |||||||||||||||||||||||||||||||| |||||||||| |||| || ||||  |||||||||||||||    
T  5243 aaaacacgctgaaaagactcgtgttggtttgtagggtcagtcgacaatgcttaaagtcgtctgggatgttaca 5315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0333; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 19 - 91
Target Start/End: Original strand, 4783 - 4855
Alignment:
Q  19 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgggatgttaca 91  Q
    |||||||||||||||||||||||||||||||| |||||||||| |||| || ||||  | |||||||||||||    
T  4783 aaaacacgctgaaaagactcgtgttggtttgtagggtcagtcgacaatgcttaaagtcgactgggatgttaca 4855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0333; HSP #3
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 19 - 91
Target Start/End: Original strand, 5346 - 5418
Alignment:
Q  19 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgggatgttaca 91  Q
    |||||||||||||||||||||||||||||||| |||| ||||| |||| || ||||  |||| ||||||||||    
T  5346 aaaacacgctgaaaagactcgtgttggtttgtagggtaagtcgacaatgcttaaagtcgtctaggatgttaca 5418  T

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Target: scaffold0047 (Bit Score: 37; Significance: 0.00000000001; HSPs: 2)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 19 - 91
Target Start/End: Complemental strand, 17521 - 17449
Alignment:
Q  19 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgggatgttaca 91  Q
    |||||||||||||||||||||||||||||  | ||||||||||||||| || |||   |||||| ||||||||    
T  17521 aaaacacgctgaaaagactcgtgttggttcatagggtcagtcggcaatacttaaaatcgtctggaatgttaca 17449  T

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Target: scaffold0047; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 21 - 91
Target Start/End: Complemental strand, 18056 - 17987
Alignment:
Q  21 aacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgggatgttaca 91  Q
    |||||||||||||||||||||||| ||||| |||||| ||| |||| || ||||  |||| ||||||||||    
T  18056 aacacgctgaaaagactcgtgttgatttgtagggtcaatcgacaatgcttaaagtcgtct-ggatgttaca 17987  T

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Target: scaffold0036 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 68
Target Start/End: Original strand, 26280 - 26340
Alignment:
Q  8 cgagagagaagaaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcc 68  Q
    |||| ||||| | |||||||||||||||||||||||| ||||| || ||| ||||||||||    
T  26280 cgagggagaacataacacgctgaaaagactcgtgttgatttgtaggatcaatcggcaatcc 26340  T

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Target: scaffold0036; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 31 - 73
Target Start/End: Original strand, 16279 - 16321
Alignment:
Q  31 aaagactcgtgttggtttgtggggtcagtcggcaatcctgaaa 73  Q
    |||| ||||||||||||||| ||||||||||||||||| ||||    
T  16279 aaaggctcgtgttggtttgtagggtcagtcggcaatcccgaaa 16321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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