View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF4298_low_2 (Length: 691)
Name: NF4298_low_2
Description: NF4298
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4298_low_2 |
 | |
|
Alignment Details
Target: chr4 (Bit Score: 479; Significance: 0; HSPs: 4)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 479; E-Value: 0
Query Start/End: Original strand, 143 - 677
Target Start/End: Original strand, 16080386 - 16080921
Alignment:
| Q |
143 |
tggtagtcttattgtacatgatcaaacaagggtaggatgcaaggcactgttgtatatcaagaaaagtgaagataggtggactgtttctagatttgtaaga |
242 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
16080386 |
tggtagtcttattgtacatgatcaaacaagggtaggatgcaaggcactgttgtatatcaagaaaagtgaagataggtggactgtttctagatttgtaaga |
16080485 |
T |
|
| Q |
243 |
gaccataatcatgaactattttccccaaacaattcacagtttcttagagtacatagaagcaaaaccaaagtgcnnnnnnn-cttattgatgtgcttgatg |
341 |
Q |
| |
|
||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
16080486 |
gaccataatcatgaactattttccccaaacagttcacactttcttagagtacatagaagcaaaaccaaagtgcaaaaaaaacttattgatgtgcttgatg |
16080585 |
T |
|
| Q |
342 |
attctggtataggccctagtaaaatagcatcagtgttatgtaccgagagtggtggtgttgataatgttggatttagccaacaagatgttattaattattt |
441 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
16080586 |
attctggtataggccctagtaaaatagcatcagtgttatgtaaagagagtggtggtgttgataatgttggatttagccaacaagatgttattaattattt |
16080685 |
T |
|
| Q |
442 |
aactgtgaagagacaaaaacaattagaaaatggcgatgctcagttgatgttatcgtactttaagaattgtcagttgaagaatcctgggtttttctatgca |
541 |
Q |
| |
|
||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
16080686 |
aactgtgaagagacaaaaacaattagaaaatggagatgctcagatgatgttatcgtactttaagaattgtcagttgaagaatcctgggtttttctatgca |
16080785 |
T |
|
| Q |
542 |
tttcaaatggacgcagaaggtaaattagcaaattgcttttgggttgattcaaggtctagaatggcttacaaatattttggtgatgtggtgacttttgatc |
641 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
16080786 |
tttcaaatggacgcagaaggtaaattagcaaattgcttttgggttgattcaaggtctagaatggcttacaaatattttggtgatgtggtgacttttgatc |
16080885 |
T |
|
| Q |
642 |
caacatacttaacaaataagtacctaatgccctttg |
677 |
Q |
| |
|
||||||||||||||||||| |||||||||||||||| |
|
|
| T |
16080886 |
caacatacttaacaaataaatacctaatgccctttg |
16080921 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 319; E-Value: 1e-180
Query Start/End: Original strand, 323 - 677
Target Start/End: Original strand, 51166200 - 51166554
Alignment:
| Q |
323 |
cttattgatgtgcttgatgattctggtataggccctagtaaaatagcatcagtgttatgtaccgagagtggtggtgttgataatgttggatttagccaac |
422 |
Q |
| |
|
||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
51166200 |
cttattgatgtgcttcatgattctggtataggccctagtaaaatagcatcagtgttatgtactgagagtggtggtgttgataatgttggatttagccaac |
51166299 |
T |
|
| Q |
423 |
aagatgttattaattatttaactgtgaagagacaaaaacaattagaaaatggcgatgctcagttgatgttatcgtactttaagaattgtcagttgaagaa |
522 |
Q |
| |
|
||||||||||||||||||||| ||| |||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||| |
|
|
| T |
51166300 |
aagatgttattaattatttaagtgtaaagagacaaaaacaattagaaaatggagatgctcacttgatgttatcgtactttaagaattgtcagttgaagaa |
51166399 |
T |
|
| Q |
523 |
tcctgggtttttctatgcatttcaaatggacgcagaaggtaaattagcaaattgcttttgggttgattcaaggtctagaatggcttacaaatattttggt |
622 |
Q |
| |
|
|||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
51166400 |
tcctggttttttttatgcatttcaaatggacgcagaaggtaaattagcaaattgcttttgggttgattcaaggtctagaatggcttacaaatattttggt |
51166499 |
T |
|
| Q |
623 |
gatgtggtgacttttgatccaacatacttaacaaataagtacctaatgccctttg |
677 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
51166500 |
gatgtggtgacttttgatccaacatacttaacaaataaatacctaatgccctttg |
51166554 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 17 - 120
Target Start/End: Original strand, 16080258 - 16080362
Alignment:
| Q |
17 |
gaataaaggttttagctttcgtatgggtcgtgttactaaatcaagaacggatggtagggt-aattggtcaagagattctttgttcaaaggaggggtttag |
115 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||| | |
|
|
| T |
16080258 |
gaataaaggttttagctttcgtatgggtcgtgttactaaatcaagaacggatggtagggtaaattggtcaagagattctttgttctaaggaggggtttgg |
16080357 |
T |
|
| Q |
116 |
atccc |
120 |
Q |
| |
|
||||| |
|
|
| T |
16080358 |
atccc |
16080362 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 21 - 113
Target Start/End: Complemental strand, 38590312 - 38590219
Alignment:
| Q |
21 |
aaaggttttagctttcgtatgggtcgtgttactaaatcaagaacggatggtagggtaattggtcaagagattctttgttcaaa-ggaggggttt |
113 |
Q |
| |
|
||||||||||||||||| |||||||| |||||||||||||||| ||||| | |||||||||| ||||||||||||||||| |||||||||| |
|
|
| T |
38590312 |
aaaggttttagctttcgcttgggtcgtattactaaatcaagaacagatggattgataattggtcaggagattctttgttcaaagggaggggttt |
38590219 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 464; Significance: 0; HSPs: 3)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 464; E-Value: 0
Query Start/End: Original strand, 146 - 677
Target Start/End: Original strand, 48772491 - 48773023
Alignment:
| Q |
146 |
tagtcttattgtacatgatcaaacaagggtaggatgcaaggcactgttgtatatcaagaaaagtgaagataggtggactgtttctagatttgtaagagac |
245 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||| ||||||||| |||||| |
|
|
| T |
48772491 |
tagtcttattgtacatgatcaaacaagggtaggatgcaaggcaccgttgtatatcaagaaaagtgaagataggtggattgtttttagatttgttagagac |
48772590 |
T |
|
| Q |
246 |
cataatcatgaactattttccccaaacaattcacagtttcttagagtacatagaagcaaaaccaaagtgcnnnnnnn-cttattgatgtgcttgatgatt |
344 |
Q |
| |
|
|||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
48772591 |
cataatcatgaactattttccctaaacagttcacagtttcttagagtacatagaagcaaaaccaaagtgcaaaaaaaacttattgatgtgcttgatgatt |
48772690 |
T |
|
| Q |
345 |
ctggtataggccctagtaaaatagcatcagtgttatgtaccgagagtggtggtgttgataatgttggatttagccaacaagatgttattaattatttaac |
444 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
48772691 |
ctggtataggccctagtaaaatagcatcagtgttatgtatcgagagtggtggtgttgataatgttggatttagccaacaagatgttattaattatttaac |
48772790 |
T |
|
| Q |
445 |
tgtgaagagacaaaaacaattagaaaatggcgatgctcagttgatgttatcgtactttaagaattgtcagttgaagaatcctgggtttttctatgcattt |
544 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
48772791 |
tgtgaagagacaaaaacaattagaaaatggagatgctcagttgatgttatcgtactttaagaattgtcagttgaagaatcctgggtttttctatgcattt |
48772890 |
T |
|
| Q |
545 |
caaatggacgcagaaggtaaattagcaaattgcttttgggttgattcaaggtctagaatggcttacaaatattttggtgatgtggtgacttttgatccaa |
644 |
Q |
| |
|
||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
48772891 |
caaatggacgcagaaggtaaattagcaaattacttttgggttgattcaaggtctagaatggcttacaaatattttggtgatgtggtgacttttgatccaa |
48772990 |
T |
|
| Q |
645 |
catacttaacaaataagtacctaatgccctttg |
677 |
Q |
| |
|
|||||||||||||||| |||||||||||||||| |
|
|
| T |
48772991 |
catacttaacaaataaatacctaatgccctttg |
48773023 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 17 - 120
Target Start/End: Original strand, 48772361 - 48772464
Alignment:
| Q |
17 |
gaataaaggttttagctttcgtatgggtcgtgttactaaatcaagaacggatggtagggtaattggtcaagagattctttgttcaaaggaggggtttaga |
116 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
48772361 |
gaataaaggttttagctttcgtatgggtcgtgttactaaatcaagaacggatggtagggtaattggtcaagagattctttgtttaaaggaggggtttaga |
48772460 |
T |
|
| Q |
117 |
tccc |
120 |
Q |
| |
|
|||| |
|
|
| T |
48772461 |
tccc |
48772464 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 53 - 109
Target Start/End: Original strand, 110843 - 110899
Alignment:
| Q |
53 |
taaatcaagaacggatggtagggtaattggtcaagagattctttgttcaaaggaggg |
109 |
Q |
| |
|
|||||||||||| |||||| ||||||||||||||||||| |||||||||||||||| |
|
|
| T |
110843 |
taaatcaagaacaaatggtatggtaattggtcaagagattgtttgttcaaaggaggg |
110899 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 370; Significance: 0; HSPs: 2)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 370; E-Value: 0
Query Start/End: Original strand, 16 - 677
Target Start/End: Original strand, 63898 - 64559
Alignment:
| Q |
16 |
agaataaaggttttagctttcgtatgggtcgtgttactaaatcaagaacggatggtagggtaattggtcaagagattctttgttcaaaggaggggtttag |
115 |
Q |
| |
|
|||| ||||||||||| ||||| |||||||| |||||||||||||||||| |||||| || ||||||||||| |||||||||||||||||||| ||||| |
|
|
| T |
63898 |
agaaaaaaggttttagttttcgcatgggtcgggttactaaatcaagaacgaatggtattgtgattggtcaagaaattctttgttcaaaggagggttttag |
63997 |
T |
|
| Q |
116 |
atcccnnnnnnnnnnnnnnnnnnnnnntggtagtcttattgtacatgatcaaacaagggtaggatgcaaggcactgttgtatatcaagaaaagtgaagat |
215 |
Q |
| |
|
||| | ||||||||||| ||||| |||||||||||||||||||||||| || | ||||| |||||||||| ||||||| |
|
|
| T |
63998 |
atc-caaaaaaaattgaaaaaagaaaatggtagtcttaaagtacacgatcaaacaagggtaggatgcaagtcaatattgtacatcaagaaaaatgaagat |
64096 |
T |
|
| Q |
216 |
aggtggactgtttctagatttgtaagagaccataatcatgaactattttccccaaacaattcacagtttcttagagtacatagaagcaaaaccaaagtgc |
315 |
Q |
| |
|
|||||| |||||||||||||||||||||||||||||||| ||||||||||| || | |||||| |||| |||||||||||| |||||| ||||| |
|
|
| T |
64097 |
gggtggattgtttctagatttgtaagagaccataatcatgtactattttcccgaagaagttcacaacatcttcgagtacatagaaagaaaaccccagtgc |
64196 |
T |
|
| Q |
316 |
nnnnnnn--cttattgatgtgcttgatgattctggtataggccctagtaaaatagcatcagtgttatgtaccgagagtggtggtgttgataatgttggat |
413 |
Q |
| |
|
||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||| |||||||||| |
|
|
| T |
64197 |
aaaaaaaaacttattgatgtgcttcatgattctggtataggccctagtaaaatagcatcagtgttatgtactgagagtggcggtgttgagaatgttggat |
64296 |
T |
|
| Q |
414 |
ttagccaacaagatgttattaattatttaactgtgaagagacaaaaacaattagaaaatggcgatgctcagttgatgttatcgtactttaagaattgtca |
513 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||| | |
|
|
| T |
64297 |
ttagccaacaagatgttattaattatttaagtgtaaagagacaaaaacaattagaaaatggagatgctcacttgatgttatcgtactttaagaattgtta |
64396 |
T |
|
| Q |
514 |
gttgaagaatcctgggtttttctatgcatttcaaatggacgcagaaggtaaattagcaaattgcttttgggttgattcaaggtctagaatggcttacaaa |
613 |
Q |
| |
|
||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
64397 |
gttgaagaatcctgggttttt-tatgcatttcaaatggacgcagaaggtaaattagcaaattgcttttgggttgattcaatgtctagaatggcttacaaa |
64495 |
T |
|
| Q |
614 |
tattttggtgatgtggtgacttttgatccaacatacttaacaaataagtacctaatgccctttg |
677 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||| |
|
|
| T |
64496 |
tattttggtgatgtggtgacttttgatccaacatacttaacaaataaatacataatgccctttg |
64559 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 21 - 113
Target Start/End: Original strand, 22638941 - 22639032
Alignment:
| Q |
21 |
aaaggttttagctttcgtatgggtcgtgttactaaatcaagaacggatggtagggtaattggtcaagagattctttgttcaaaggaggggttt |
113 |
Q |
| |
|
||||||||||||||||| |||| ||| ||| |||||||||||| |||| | |||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
22638941 |
aaaggttttagctttcgcttggg-cgtattattaaatcaagaacaaatggattgataattggtcaggagattctttgttcaaaggaggggttt |
22639032 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 173; Significance: 1e-92; HSPs: 2)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 173; E-Value: 1e-92
Query Start/End: Original strand, 145 - 660
Target Start/End: Complemental strand, 44886014 - 44885504
Alignment:
| Q |
145 |
gtagtcttattgtacatgatcaaacaagggtaggatgcaaggcactgttgtatatcaagaaaagtgaagataggtggactgtttctagatttgtaagaga |
244 |
Q |
| |
|
||||||| ||| ||||||| |||| ||||| ||||||||||||| ||| ||| | ||||||| | | |||| |||| |||||||||||||||||| || |
|
|
| T |
44886014 |
gtagtctcattacacatgatgaaaccagggtgggatgcaaggcacggttatatttaaagaaaaataatgatatatggattgtttctagatttgtaagcga |
44885915 |
T |
|
| Q |
245 |
ccataatcatgaactattttccccaaacaattcacagtttcttagagtacatagaagcaaaaccaaagtgcnnnnnnn-cttattgatgtgcttgatgat |
343 |
Q |
| |
|
||||||||| | || ||||| || | | | |||||| |||| | |||||||||| ||||| ||||||| |||| ||||||||||||||| |
|
|
| T |
44885914 |
ccataatcaccagctgttttctcctagaagtgcacagtctcttcgcgtacatagaaagaaaactaaagtgcaaaagacacttactgatgtgcttgatgaa |
44885815 |
T |
|
| Q |
344 |
tctggtataggccctagtaaaatagcatcagtgttatgtaccgagagtggtggtgttgataatgttggatttagccaacaagatgttattaattatttaa |
443 |
Q |
| |
|
|||||| ||||| |||| | |||| | ||||| || || ||||| ||| |||||||| |||||| ||| |||||||||||||| ||||| |||| |
|
|
| T |
44885814 |
tctggtttaggc------aaaacaacatctatcttatgcactgaaagtggcggtattgataattttggatctagtcaacaagatgttatcaattacttaa |
44885721 |
T |
|
| Q |
444 |
ctgtgaagagacaaaaacaattagaaaatggcgatgctcagttgatgttatcgtactttaagaattgtcagttgaagaatcctgggtttttctatgcatt |
543 |
Q |
| |
|
||| |||||||||||||||| ||||| | |||||||| ||||||||||| ||||||||||||||||||||||||||| |||||||||||||||| || |
|
|
| T |
44885720 |
gtgtacagagacaaaaacaatttgaaaacagagatgctcaattgatgttatcatactttaagaattgtcagttgaagaatactgggtttttctatgcgtt |
44885621 |
T |
|
| Q |
544 |
tcaaatggacgcagaaggtaaattagcaaattgcttttgggttgattcaaggtctagaatggcttacaaatattttggtgatgtggtgacttttgatcca |
643 |
Q |
| |
|
||||||||| || ||||| |||||| | |||||||||||||||||||||||||||||| | |||||||||||||||||||||||||| |||||||||||| |
|
|
| T |
44885620 |
tcaaatggatgccgaaggaaaattaactaattgcttttgggttgattcaaggtctagagttgcttacaaatattttggtgatgtggttacttttgatcca |
44885521 |
T |
|
| Q |
644 |
acatacttaacaaataa |
660 |
Q |
| |
|
|| ||||| | |||||| |
|
|
| T |
44885520 |
acgtacttgaaaaataa |
44885504 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 14 - 113
Target Start/End: Complemental strand, 44886146 - 44886047
Alignment:
| Q |
14 |
tcagaataaaggttttagctttcgtatgggtcgtgttactaaatcaagaacggatggtagggtaattggtcaagagattctttgttcaaaggaggggttt |
113 |
Q |
| |
|
|||||| ||||||||||| || || ||||| ||||||||||| |||||||| | |||| | ||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
44886146 |
tcagaacaaaggttttagtttccgcatgggccgtgttactaagtcaagaacaaacggtatgataattggtcaagaaattctttgttcaaaggaggggttt |
44886047 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 126; Significance: 1e-64; HSPs: 6)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 21 - 312
Target Start/End: Original strand, 19329036 - 19329327
Alignment:
| Q |
21 |
aaaggttttagctttcgtatgggtcgtgttactaaatcaagaacggatggtagggtaattggtcaagagattctttgttcaaaggaggggtttagatccc |
120 |
Q |
| |
|
||||||||||| || ||||||||| |||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||| | |
|
|
| T |
19329036 |
aaaggttttagtttccgtatgggttgtgttactaaatcaagaacgaatggtatggtaattggtcaagagattctttgttcaaaggaggggtttagatcac |
19329135 |
T |
|
| Q |
121 |
nnnnnnnnnnnnnnnnnnnnnntggtagtcttattgtacatgatcaaacaagggtaggatgcaaggcactgttgtatatcaagaaaagtgaagataggtg |
220 |
Q |
| |
|
||||| ||||| ||||| ||||||||||||||||||||||| || ||||||| |||||||||| |||||||||||| |
|
|
| T |
19329136 |
aaaattatttgaaaatagaaaatggtattcttaaagtacacgatcaaacaagggtaggatgcaaaacaatgttgtacatcaagaaaaatgaagataggtg |
19329235 |
T |
|
| Q |
221 |
gactgtttctagatttgtaagagaccataatcatgaactattttccccaaacaattcacagtttcttagagtacatagaagcaaaaccaaag |
312 |
Q |
| |
|
|||| |||||||||||| ||||||| | |||||||||||||||||||||| | |||||| |||||| |||| ||||||||||||||||||| |
|
|
| T |
19329236 |
gactatttctagatttgaaagagacaacaatcatgaactattttccccaataatttcacattttcttcgagtgcatagaagcaaaaccaaag |
19329327 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 514 - 660
Target Start/End: Original strand, 19329358 - 19329503
Alignment:
| Q |
514 |
gttgaagaatcctgggtttttctatgcatttcaaatggacgcagaaggtaaattagcaaattgcttttgggttgattcaaggtctagaatggcttacaaa |
613 |
Q |
| |
|
|||||||||| ||||||||| ||||||||||||||||| | ||||| ||||||||||||| |||||||||||||||||| |||| ||||||||||||| |
|
|
| T |
19329358 |
gttgaagaattatgggtttttttatgcatttcaaatggatgtagaagcaaaattagcaaattacttttgggttgattcaagatctaaaatggcttacaaa |
19329457 |
T |
|
| Q |
614 |
tattttggtgatgtggtgacttttgatccaacatacttaacaaataa |
660 |
Q |
| |
|
|||||||||||||| |||| |||| |||||||||||| ||||||||| |
|
|
| T |
19329458 |
tattttggtgatgtagtgaatttt-atccaacatactaaacaaataa |
19329503 |
T |
|
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Target: chr6; HSP #3
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 486 - 677
Target Start/End: Complemental strand, 8832582 - 8832392
Alignment:
| Q |
486 |
tgatgttatcgtactttaagaattgtcagttgaagaatcctgggtttttctatgcatttcaaatggacgcagaaggtaaattagcaaattgcttttgggt |
585 |
Q |
| |
|
|||||||||| || | ||| |||||||| |||||||||||| |||||| |||||||||||||||| ||||| ||||||| ||||||||| ||||| |
|
|
| T |
8832582 |
tgatgttatcttaatataaaaattgtcaaccgaagaatcctggatttttccatgcatttcaaatggatatagaagtaaaattagtaaattgcttatgggt |
8832483 |
T |
|
| Q |
586 |
tgattcaaggtctagaatggcttacaaatattttggtgatgtggtgacttttgatccaacatacttaacaaataagtacctaatgccctttg |
677 |
Q |
| |
|
|| |||||||||| || || |||||||||||||| |||| | ||||||||||||| | |||||| | |||||| ||| |||||| |||| |
|
|
| T |
8832482 |
tgtgtcaaggtctaaaacggtttacaaatattttgatgat-tactgacttttgatccgaaatacttcaaaaataaatacaaaatgccttttg |
8832392 |
T |
|
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Target: chr6; HSP #4
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 486 - 677
Target Start/End: Complemental strand, 8835867 - 8835677
Alignment:
| Q |
486 |
tgatgttatcgtactttaagaattgtcagttgaagaatcctgggtttttctatgcatttcaaatggacgcagaaggtaaattagcaaattgcttttgggt |
585 |
Q |
| |
|
|||||||||| || | ||| |||||||| |||||||||||| |||||| |||||||||||||||| |||||| ||||||| ||||||||| ||||| |
|
|
| T |
8835867 |
tgatgttatcttaatataaaaattgtcaaccgaagaatcctggatttttccatgcatttcaaatggatacagaagtaaaattagtaaattgcttatgggt |
8835768 |
T |
|
| Q |
586 |
tgattcaaggtctagaatggcttacaaatattttggtgatgtggtgacttttgatccaacatacttaacaaataagtacctaatgccctttg |
677 |
Q |
| |
|
|| | |||||||| |||| |||||||||||||| |||| | ||||||||||||| | |||||| | |||||| ||| |||||| |||| |
|
|
| T |
8835767 |
tgtgttaaggtctaaaatgatttacaaatattttgatgat-tactgacttttgatccgaaatacttgaaaaataaatacaaaatgccttttg |
8835677 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 531 - 625
Target Start/End: Complemental strand, 26718429 - 26718335
Alignment:
| Q |
531 |
ttttctatgcatttcaaatggacgcagaaggtaaattagcaaattgcttttgggttgattcaaggtctagaatggcttacaaatattttggtgat |
625 |
Q |
| |
|
|||| |||||||| ||||||| | ||||||| | ||| |||| || ||||||||||||||||||| ||||| |||||||| ||||| ||||||| |
|
|
| T |
26718429 |
ttttttatgcattctaaatggatgtagaaggtcacttatcaaactgtttttgggttgattcaaggtttagaagggcttacatatattatggtgat |
26718335 |
T |
|
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Target: chr6; HSP #6
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 53 - 109
Target Start/End: Complemental strand, 20647023 - 20646967
Alignment:
| Q |
53 |
taaatcaagaacggatggtagggtaattggtcaagagattctttgttcaaaggaggg |
109 |
Q |
| |
|
|||||||||||| |||||| | ||||||||||||||||| |||||||||||||||| |
|
|
| T |
20647023 |
taaatcaagaacaaatggtatgataattggtcaagagattgtttgttcaaaggaggg |
20646967 |
T |
|
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