View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4299-Insertion-10 (Length: 262)
Name: NF4299-Insertion-10
Description: NF4299
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4299-Insertion-10 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 216; Significance: 1e-119; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 216; E-Value: 1e-119
Query Start/End: Original strand, 1 - 262
Target Start/End: Complemental strand, 42639762 - 42639499
Alignment:
| Q |
1 |
tttccagtagccagtgtcggtgagacgctttggtcttcctcctctcacttcactttcttgccttggaatgaaaaagaaccattgttccgtgtctctcata |
100 |
Q |
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| T |
42639762 |
tttccagtagccagtgtcggtgagacgctttggtcttcctcctctcacttcactttcttgccttggaatgaaaaagaaccattgttccgtgtctctcata |
42639663 |
T |
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| Q |
101 |
ctagcctctcctgaaatttctgaaaaccaataattttgtaag---nnnnnnnnccaagttgtttaatttacaatatagcaatatatggattttgtcggga |
197 |
Q |
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| T |
42639662 |
ctagcctctcctgaaatttctgaaaaccaataattttgtaagaaaaaaaaaaaccaa-ttgtttaatttacaatatagcaatatatggattttgtcggga |
42639564 |
T |
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| Q |
198 |
caaataaattataaattntgctttcacaatgatatagaatttttacatgcaatgatgcaaaatga |
262 |
Q |
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||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
42639563 |
caaataaattataaattatgctttcacaatgatatagaatttttacatgcaatgatgcaaaatga |
42639499 |
T |
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