View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4299-Insertion-17 (Length: 296)
Name: NF4299-Insertion-17
Description: NF4299
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4299-Insertion-17 |
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| [»] chr4 (1 HSPs) |
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Alignment Details
Target: chr4 (Bit Score: 267; Significance: 1e-149; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 267; E-Value: 1e-149
Query Start/End: Original strand, 1 - 296
Target Start/End: Complemental strand, 42465191 - 42464893
Alignment:
| Q |
1 |
tatatcattaccgtatttcttaaataagtaaagaaaatggtgttactgtacaaaatataaagtcgtgccaacatgtttaatcatatgatatatcc----a |
96 |
Q |
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| T |
42465191 |
tatatcattaccgtatttcttaaataagtaaagaaaatggtgttactgtacaaaatataaagtcgtgccaacatgtttaatcatatgatatatcctctca |
42465092 |
T |
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| Q |
97 |
gaggattatcaattctttcacagctgcacgttgttaattatataattaaacatttttcactagctgaatttagatattcaaaaagtacatagaagtccat |
196 |
Q |
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| T |
42465091 |
gaggattaacaattctttcacagctgcacgttgttaattatataattaaacatttt-cactagctgaatttagatattcaaaaagtacatagaagtccat |
42464993 |
T |
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| Q |
197 |
gaaattgaacttaaatacctcaaagtggtttttagctagtctagattctaggcatttatatttttcgaaggtccaaacttatattcaagaatcaagatgt |
296 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
42464992 |
gaaattgaacttaaatacctcaaagtggtttttagctagtctagagtctaggcatttatatttttcgaaggtccaaacttatattcaagaatcaagatgt |
42464893 |
T |
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