View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4299-Insertion-22 (Length: 165)

Name: NF4299-Insertion-22
Description: NF4299
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4299-Insertion-22
NF4299-Insertion-22
[»] scaffold0855 (1 HSPs)
scaffold0855 (1-161)||(3639-3799)
[»] scaffold0847 (1 HSPs)
scaffold0847 (1-161)||(3804-3964)
[»] chr6 (56 HSPs)
chr6 (1-161)||(31965270-31965430)
chr6 (1-161)||(20221358-20221517)
chr6 (1-161)||(22115342-22115501)
chr6 (1-161)||(29682777-29682937)
chr6 (11-161)||(20225264-20225414)
chr6 (11-161)||(22119248-22119398)
chr6 (1-157)||(24392654-24392811)
chr6 (3-161)||(18973830-18973987)
chr6 (1-165)||(15172396-15172558)
chr6 (1-161)||(20464546-20464704)
chr6 (1-161)||(17793733-17793894)
chr6 (1-141)||(16207488-16207627)
chr6 (1-165)||(15162384-15162546)
chr6 (36-165)||(15470916-15471044)
chr6 (1-101)||(26822024-26822125)
chr6 (1-157)||(5399398-5399553)
chr6 (1-141)||(18396277-18396416)
chr6 (1-165)||(22601107-22601270)
chr6 (1-101)||(3923806-3923907)
chr6 (1-101)||(12657855-12657956)
chr6 (1-101)||(12660259-12660359)
chr6 (1-101)||(28733955-28734056)
chr6 (1-69)||(23639694-23639762)
chr6 (1-101)||(23523763-23523864)
chr6 (1-141)||(14992053-14992192)
chr6 (4-157)||(13217115-13217262)
chr6 (19-101)||(18627617-18627700)
chr6 (1-90)||(25923213-25923303)
chr6 (19-98)||(18993358-18993438)
chr6 (1-95)||(19993766-19993861)
chr6 (35-141)||(29093748-29093853)
chr6 (1-69)||(17522201-17522269)
chr6 (1-97)||(20218295-20218392)
chr6 (1-97)||(22112320-22112417)
chr6 (1-69)||(34108829-34108896)
chr6 (1-69)||(13168544-13168613)
chr6 (1-97)||(25031038-25031135)
chr6 (3-97)||(25339057-25339152)
chr6 (1-55)||(23517206-23517260)
chr6 (1-81)||(8603669-8603750)
chr6 (1-69)||(9414553-9414621)
chr6 (1-101)||(19612554-19612654)
chr6 (5-66)||(21237786-21237847)
chr6 (1-97)||(4741154-4741251)
chr6 (3-87)||(20105459-20105544)
chr6 (1-97)||(26138831-26138928)
chr6 (1-97)||(29254153-29254250)
chr6 (1-69)||(32796355-32796423)
chr6 (4-81)||(6795113-6795191)
chr6 (1-81)||(25964085-25964166)
chr6 (1-81)||(25968732-25968813)
chr6 (1-52)||(1626320-1626371)
chr6 (3-97)||(25507761-25507856)
chr6 (1-52)||(25949491-25949542)
chr6 (35-97)||(26018162-26018225)
chr6 (35-97)||(26157535-26157598)
[»] chr7 (35 HSPs)
chr7 (1-161)||(679252-679412)
chr7 (1-165)||(38877575-38877739)
chr7 (1-161)||(15523198-15523358)
chr7 (1-165)||(17911755-17911919)
chr7 (1-161)||(4465543-4465703)
chr7 (1-161)||(30063720-30063879)
chr7 (19-157)||(11483618-11483755)
chr7 (1-161)||(4982906-4983066)
chr7 (2-101)||(4541338-4541437)
chr7 (11-160)||(14925695-14925844)
chr7 (11-160)||(15349161-15349310)
chr7 (22-157)||(46274288-46274422)
chr7 (3-157)||(1462719-1462872)
chr7 (1-157)||(16897025-16897181)
chr7 (1-128)||(1614142-1614268)
chr7 (1-101)||(4256433-4256534)
chr7 (1-62)||(17206252-17206313)
chr7 (92-160)||(1864563-1864631)
chr7 (1-97)||(21005346-21005443)
chr7 (1-60)||(4460621-4460680)
chr7 (1-69)||(4316833-4316901)
chr7 (1-62)||(6712301-6712362)
chr7 (1-81)||(3376352-3376433)
chr7 (1-97)||(8787108-8787205)
chr7 (1-69)||(25034168-25034236)
chr7 (1-97)||(33609894-33609991)
chr7 (92-160)||(6847592-6847660)
chr7 (1-97)||(6257346-6257443)
chr7 (1-97)||(8780269-8780366)
chr7 (1-97)||(9193838-9193935)
chr7 (92-149)||(11281555-11281612)
chr7 (1-90)||(4090870-4090960)
chr7 (1-97)||(9562105-9562201)
chr7 (1-81)||(48713617-48713698)
chr7 (92-160)||(11268574-11268642)
[»] chr8 (24 HSPs)
chr8 (1-161)||(22904766-22904927)
chr8 (1-161)||(24221310-24221469)
chr8 (1-165)||(23455752-23455915)
chr8 (3-101)||(24342231-24342330)
chr8 (1-101)||(14161953-14162054)
chr8 (1-101)||(21319593-21319694)
chr8 (1-101)||(26854239-26854340)
chr8 (1-101)||(19792047-19792148)
chr8 (92-159)||(9798239-9798306)
chr8 (2-69)||(18572165-18572232)
chr8 (1-69)||(15634473-15634541)
chr8 (1-69)||(15636246-15636314)
chr8 (1-69)||(25431892-25431960)
chr8 (19-81)||(6279937-6280000)
chr8 (3-66)||(24887170-24887233)
chr8 (1-97)||(1990311-1990408)
chr8 (64-157)||(18008357-18008449)
chr8 (1-97)||(21139837-21139934)
chr8 (19-97)||(23193761-23193840)
chr8 (19-97)||(23221332-23221411)
chr8 (1-90)||(24967424-24967514)
chr8 (1-69)||(15759729-15759797)
chr8 (1-69)||(22285145-22285213)
chr8 (1-49)||(31469534-31469582)
[»] scaffold0014 (1 HSPs)
scaffold0014 (1-161)||(168363-168523)
[»] chr5 (19 HSPs)
chr5 (1-161)||(23029326-23029486)
chr5 (1-161)||(23114427-23114588)
chr5 (4-161)||(24166435-24166592)
chr5 (1-101)||(12410694-12410795)
chr5 (1-101)||(22170954-22171055)
chr5 (1-157)||(17408495-17408650)
chr5 (1-157)||(22948740-22948895)
chr5 (1-160)||(19222082-19222241)
chr5 (1-157)||(20724611-20724766)
chr5 (1-97)||(20738523-20738620)
chr5 (1-165)||(22942530-22942693)
chr5 (1-97)||(2953356-2953453)
chr5 (1-66)||(18091769-18091834)
chr5 (1-100)||(16677246-16677346)
chr5 (19-97)||(20103749-20103828)
chr5 (1-81)||(31757954-31758035)
chr5 (1-90)||(24165422-24165512)
chr5 (1-81)||(20169311-20169392)
chr5 (92-160)||(42687435-42687503)
[»] chr2 (27 HSPs)
chr2 (1-161)||(24371198-24371358)
chr2 (1-165)||(20852296-20852460)
chr2 (1-161)||(24321966-24322126)
chr2 (1-165)||(23256773-23256935)
chr2 (4-139)||(24609850-24609984)
chr2 (1-101)||(19012830-19012931)
chr2 (1-101)||(19124147-19124248)
chr2 (1-157)||(29577110-29577265)
chr2 (1-160)||(25592881-25593040)
chr2 (90-160)||(21511696-21511766)
chr2 (1-157)||(23704448-23704603)
chr2 (59-157)||(24177457-24177554)
chr2 (1-66)||(13004656-13004721)
chr2 (92-160)||(21516175-21516243)
chr2 (1-69)||(31590365-31590432)
chr2 (1-69)||(36129950-36130018)
chr2 (1-101)||(15584006-15584107)
chr2 (19-141)||(21185-21311)
chr2 (1-104)||(21344299-21344401)
chr2 (1-69)||(29951794-29951866)
chr2 (1-61)||(22578184-22578243)
chr2 (1-81)||(23340735-23340816)
chr2 (1-97)||(23698630-23698727)
chr2 (1-97)||(24366126-24366223)
chr2 (19-69)||(539384-539434)
chr2 (1-90)||(41653441-41653531)
chr2 (1-97)||(25858410-25858507)
[»] chr4 (33 HSPs)
chr4 (1-165)||(9717516-9717680)
chr4 (21-161)||(17168977-17169117)
chr4 (21-161)||(17174537-17174677)
chr4 (1-132)||(23793398-23793529)
chr4 (1-161)||(12345715-12345874)
chr4 (1-101)||(5675637-5675736)
chr4 (1-157)||(11922206-11922361)
chr4 (1-108)||(5513451-5513558)
chr4 (1-160)||(24493112-24493273)
chr4 (1-157)||(11902388-11902543)
chr4 (1-157)||(9857377-9857532)
chr4 (1-157)||(16953673-16953828)
chr4 (1-139)||(55267750-55267888)
chr4 (90-160)||(21276881-21276951)
chr4 (1-141)||(10731308-10731447)
chr4 (1-141)||(10945077-10945216)
chr4 (5-66)||(13510674-13510735)
chr4 (92-160)||(4743044-4743112)
chr4 (90-165)||(17465098-17465173)
chr4 (1-69)||(18749707-18749775)
chr4 (5-101)||(38652331-38652426)
chr4 (56-161)||(25190409-25190515)
chr4 (1-54)||(13883334-13883387)
chr4 (1-53)||(12347541-12347593)
chr4 (19-97)||(9192423-9192502)
chr4 (1-90)||(12808011-12808101)
chr4 (19-60)||(33330858-33330899)
chr4 (42-97)||(3772013-3772069)
chr4 (1-65)||(4742982-4743046)
chr4 (64-161)||(33330768-33330866)
chr4 (1-69)||(7197391-7197459)
chr4 (90-149)||(29367291-29367350)
chr4 (19-81)||(43701411-43701474)
[»] chr1 (28 HSPs)
chr1 (1-161)||(26194405-26194565)
chr1 (1-161)||(23299060-23299219)
chr1 (1-157)||(15421268-15421424)
chr1 (1-101)||(16384773-16384873)
chr1 (11-141)||(20860472-20860600)
chr1 (1-141)||(20497727-20497867)
chr1 (1-157)||(25404842-25404997)
chr1 (1-160)||(16527412-16527571)
chr1 (1-101)||(16148266-16148367)
chr1 (1-160)||(2130118-2130276)
chr1 (1-101)||(13799256-13799357)
chr1 (1-101)||(12059597-12059698)
chr1 (56-165)||(20448634-20448742)
chr1 (56-165)||(20534400-20534508)
chr1 (57-161)||(20898410-20898513)
chr1 (1-141)||(52755128-52755267)
chr1 (90-160)||(8236507-8236577)
chr1 (92-154)||(12726968-12727030)
chr1 (1-156)||(15346611-15346767)
chr1 (19-97)||(28763696-28763775)
chr1 (1-104)||(52169161-52169265)
chr1 (3-97)||(20412424-20412518)
chr1 (1-54)||(21924830-21924883)
chr1 (1-69)||(24680313-24680381)
chr1 (91-148)||(28553549-28553605)
chr1 (1-69)||(28208054-28208122)
chr1 (1-29)||(30818957-30818985)
chr1 (1-69)||(41802442-41802510)
[»] scaffold0001 (4 HSPs)
scaffold0001 (8-161)||(33054-33207)
scaffold0001 (8-161)||(38361-38514)
scaffold0001 (3-141)||(82385-82522)
scaffold0001 (19-97)||(520937-521016)
[»] chr3 (29 HSPs)
chr3 (1-161)||(11869597-11869757)
chr3 (1-161)||(11577508-11577667)
chr3 (1-132)||(27992496-27992628)
chr3 (1-101)||(8685663-8685763)
chr3 (1-157)||(8532063-8532218)
chr3 (1-92)||(41545594-41545685)
chr3 (68-161)||(9762383-9762475)
chr3 (68-161)||(9774838-9774930)
chr3 (1-101)||(17023422-17023523)
chr3 (1-101)||(17774964-17775064)
chr3 (1-101)||(19076265-19076365)
chr3 (1-101)||(13069942-13070043)
chr3 (1-97)||(22039014-22039111)
chr3 (1-90)||(42244378-42244468)
chr3 (1-160)||(11827171-11827329)
chr3 (1-101)||(20225049-20225150)
chr3 (1-79)||(17577036-17577115)
chr3 (1-101)||(13418557-13418658)
chr3 (1-141)||(27407386-27407524)
chr3 (1-97)||(7908693-7908789)
chr3 (1-66)||(12697319-12697384)
chr3 (1-97)||(17209754-17209851)
chr3 (98-157)||(40846744-40846803)
chr3 (90-160)||(16998924-16998994)
chr3 (1-96)||(17050903-17050999)
chr3 (1-90)||(10850548-10850638)
chr3 (1-90)||(17041890-17041980)
chr3 (1-69)||(11399050-11399118)
chr3 (1-69)||(25055188-25055256)
[»] scaffold0123 (1 HSPs)
scaffold0123 (1-161)||(14262-14423)
[»] scaffold0074 (2 HSPs)
scaffold0074 (8-161)||(22495-22647)
scaffold0074 (19-101)||(54059-54142)
[»] scaffold1559 (1 HSPs)
scaffold1559 (1-74)||(1572-1645)
[»] scaffold0213 (1 HSPs)
scaffold0213 (1-141)||(21768-21907)
[»] scaffold0088 (1 HSPs)
scaffold0088 (1-141)||(38707-38847)
[»] scaffold0011 (1 HSPs)
scaffold0011 (1-101)||(172909-173010)
[»] scaffold0264 (1 HSPs)
scaffold0264 (1-97)||(22245-22342)
[»] scaffold1092 (1 HSPs)
scaffold1092 (1-69)||(1532-1600)
[»] scaffold1058 (1 HSPs)
scaffold1058 (1-69)||(2909-2977)
[»] scaffold0713 (1 HSPs)
scaffold0713 (2-97)||(6527-6623)
[»] scaffold0094 (1 HSPs)
scaffold0094 (1-61)||(1820-1880)
[»] scaffold0362 (1 HSPs)
scaffold0362 (1-97)||(9042-9139)
[»] scaffold0278 (1 HSPs)
scaffold0278 (1-81)||(12380-12461)
[»] scaffold0031 (1 HSPs)
scaffold0031 (1-81)||(77999-78080)
[»] scaffold0197 (1 HSPs)
scaffold0197 (1-69)||(8677-8745)


Alignment Details
Target: scaffold0855 (Bit Score: 161; Significance: 4e-86; HSPs: 1)
Name: scaffold0855
Description:

Target: scaffold0855; HSP #1
Raw Score: 161; E-Value: 4e-86
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 3639 - 3799
Alignment:
Q  1 tctaatgacctaatccctatcaaaccaagcctcgaaccctaattttatgtaaatttattttctaatctatttcaccgtttttctaatgaaataacaagta 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3639 tctaatgacctaatccctatcaaaccaagcctcgaaccctaattttatgtaaatttattttctaatctatttcaccgtttttctaatgaaataacaagta 3738  T
Q  101 ttaatcgaaggaccgaaaggtgaagtttaatagttgttatttcatcatcacaaatatcaag 161  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3739 ttaatcgaaggaccgaaaggtgaagtttaatagttgttatttcatcatcacaaatatcaag 3799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0847 (Bit Score: 161; Significance: 4e-86; HSPs: 1)
Name: scaffold0847
Description:

Target: scaffold0847; HSP #1
Raw Score: 161; E-Value: 4e-86
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 3804 - 3964
Alignment:
Q  1 tctaatgacctaatccctatcaaaccaagcctcgaaccctaattttatgtaaatttattttctaatctatttcaccgtttttctaatgaaataacaagta 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3804 tctaatgacctaatccctatcaaaccaagcctcgaaccctaattttatgtaaatttattttctaatctatttcaccgtttttctaatgaaataacaagta 3903  T
Q  101 ttaatcgaaggaccgaaaggtgaagtttaatagttgttatttcatcatcacaaatatcaag 161  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3904 ttaatcgaaggaccgaaaggtgaagtttaatagttgttatttcatcatcacaaatatcaag 3964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 137; Significance: 8e-72; HSPs: 56)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 137; E-Value: 8e-72
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 31965430 - 31965270
Alignment:
Q  1 tctaatgacctaatccctatcaaaccaagcctcgaaccctaattttatgtaaatttattttctaatctatttcaccgtttttctaatgaaataacaagta 100  Q
    ||||||||||||||| ||||||||||||| |||||||||| || |||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  31965430 tctaatgacctaatctctatcaaaccaagtctcgaaccctgatcttatgtaaatctattttctaatctatttcaccgtttttctaatgaaataacaagta 31965331  T
Q  101 ttaatcgaaggaccgaaaggtgaagtttaatagttgttatttcatcatcacaaatatcaag 161  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  31965330 ttaatcgaaggaccaaaaggtgaagtttaatagttgttatttcatcatcacaaatatcaag 31965270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 133; E-Value: 2e-69
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 20221358 - 20221517
Alignment:
Q  1 tctaatgacctaatccctatcaaaccaagcctcgaaccctaattttatgtaaatttattttctaatctatttcaccgtttttctaatgaaataacaagta 100  Q
    |||||||||||||||| |||||||||||||||||||||||||| |||||||||| |||||||||||||| |||||||||||||||||||||||||||| |    
T  20221358 tctaatgacctaatcc-tatcaaaccaagcctcgaaccctaatcttatgtaaatgtattttctaatctaattcaccgtttttctaatgaaataacaagca 20221456  T
Q  101 ttaatcgaaggaccgaaaggtgaagtttaatagttgttatttcatcatcacaaatatcaag 161  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  20221457 ttaatcgaaggatcgaaaggtgaagtttaatagttgttatttcatcatcacaaatatcaag 20221517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 133; E-Value: 2e-69
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 22115342 - 22115501
Alignment:
Q  1 tctaatgacctaatccctatcaaaccaagcctcgaaccctaattttatgtaaatttattttctaatctatttcaccgtttttctaatgaaataacaagta 100  Q
    |||||||||||||||| |||||||||||||||||||||||||| |||||||||| |||||||||||||| |||||||||||||||||||||||||||| |    
T  22115342 tctaatgacctaatcc-tatcaaaccaagcctcgaaccctaatcttatgtaaatgtattttctaatctaattcaccgtttttctaatgaaataacaagca 22115440  T
Q  101 ttaatcgaaggaccgaaaggtgaagtttaatagttgttatttcatcatcacaaatatcaag 161  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  22115441 ttaatcgaaggatcgaaaggtgaagtttaatagttgttatttcatcatcacaaatatcaag 22115501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 125; E-Value: 1e-64
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 29682777 - 29682937
Alignment:
Q  1 tctaatgacctaatccctatcaaaccaagcctcgaaccctaattttatgtaaatttattttctaatctatttcaccgtttttctaatgaaataacaagta 100  Q
    |||||||||||||||||||||||||||||| |||||||||||| |||||||||| ||| || ||||||||||||||||||||||||||||||||||||||    
T  29682777 tctaatgacctaatccctatcaaaccaagcatcgaaccctaatcttatgtaaatctatattttaatctatttcaccgtttttctaatgaaataacaagta 29682876  T
Q  101 ttaatcgaaggaccgaaaggtgaagtttaatagttgttatttcatcatcacaaatatcaag 161  Q
    |||||||||||||||||| ||||||||||||||||||||||||| ||| | ||||||||||    
T  29682877 ttaatcgaaggaccgaaatgtgaagtttaatagttgttatttcaacattataaatatcaag 29682937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 119; E-Value: 4e-61
Query Start/End: Original strand, 11 - 161
Target Start/End: Original strand, 20225264 - 20225414
Alignment:
Q  11 taatccctatcaaaccaagcctcgaaccctaattttatgtaaatttattttctaatctatttcaccgtttttctaatgaaataacaagtattaatcgaag 110  Q
    ||||||||||||||||||||||||||||||||| ||||||||||  ||||||||||||| ||||||||||||||||||||||| ||||||||||||||||    
T  20225264 taatccctatcaaaccaagcctcgaaccctaatcttatgtaaatcaattttctaatctaattcaccgtttttctaatgaaatagcaagtattaatcgaag 20225363  T
Q  111 gaccgaaaggtgaagtttaatagttgttatttcatcatcacaaatatcaag 161  Q
     |||||||||||| ||||||||||||||||||||||||||||||| |||||    
T  20225364 caccgaaaggtgaggtttaatagttgttatttcatcatcacaaatgtcaag 20225414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 119; E-Value: 4e-61
Query Start/End: Original strand, 11 - 161
Target Start/End: Original strand, 22119248 - 22119398
Alignment:
Q  11 taatccctatcaaaccaagcctcgaaccctaattttatgtaaatttattttctaatctatttcaccgtttttctaatgaaataacaagtattaatcgaag 110  Q
    ||||||||||||||||||||||||||||||||| ||||||||||  ||||||||||||| ||||||||||||||||||||||| ||||||||||||||||    
T  22119248 taatccctatcaaaccaagcctcgaaccctaatcttatgtaaatcaattttctaatctaattcaccgtttttctaatgaaatagcaagtattaatcgaag 22119347  T
Q  111 gaccgaaaggtgaagtttaatagttgttatttcatcatcacaaatatcaag 161  Q
     |||||||||||| ||||||||||||||||||||||||||||||| |||||    
T  22119348 caccgaaaggtgaggtttaatagttgttatttcatcatcacaaatgtcaag 22119398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 106; E-Value: 2e-53
Query Start/End: Original strand, 1 - 157
Target Start/End: Complemental strand, 24392811 - 24392654
Alignment:
Q  1 tctaatgacctaatccctatcaaaccaagcctcgaaccctaatttt-atgtaaatttattttctaatctatttcaccgtttttctaatgaaataacaagt 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||| ||||| |||||||| |||||||    
T  24392811 tctaatgacctaatccctatcaaaccaagcctcgaaccctaatttttatgtaaatctattttctaatctatttcaccatttttataatgaaaaaacaagt 24392712  T
Q  100 attaatcgaaggaccgaaaggtgaagtttaatagttgttatttcatcatcacaaatat 157  Q
    |||||||||   ||||||||| |||||||||||||||||| ||||  |||||||||||    
T  24392711 attaatcgataaaccgaaaggcgaagtttaatagttgttaattcacaatcacaaatat 24392654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 91; E-Value: 2e-44
Query Start/End: Original strand, 3 - 161
Target Start/End: Original strand, 18973830 - 18973987
Alignment:
Q  3 taatgacctaatccctatcaaaccaagcctcgaaccctaattttatgtaaatttattttctaatctatttcaccgtttttctaatgaaataacaagtatt 102  Q
    ||||||||||||||||||||||||||| |||||||||| ||||||||||||| ||||||||||||| ||||| ||||||| |||| ||| ||||||||||    
T  18973830 taatgacctaatccctatcaaaccaagtctcgaaccctgattttatgtaaatatattttctaatctttttcatcgtttttataat-aaaaaacaagtatt 18973928  T
Q  103 aatcgaaggaccgaaaggtgaagtttaatagttgttatttcatcatcacaaatatcaag 161  Q
    || |||  ||||||||||  ||||||||||||| ||| ||||| |||||||||||||||    
T  18973929 aaacgattgaccgaaaggcaaagtttaatagtttttaattcataatcacaaatatcaag 18973987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 89; E-Value: 3e-43
Query Start/End: Original strand, 1 - 165
Target Start/End: Original strand, 15172396 - 15172558
Alignment:
Q  1 tctaatgacctaatccctatcaaaccaagcctcgaaccctaattttatgtaaatttattttctaatctatttcaccgtttttctaatgaaataacaagta 100  Q
    |||||||||||||||| |||||| |||| ||||||||||||||||||||||||| |||||||||||| |||| |||||| || |||| || |||||| ||    
T  15172396 tctaatgacctaatcc-tatcaagccaaacctcgaaccctaattttatgtaaatctattttctaatcaattttaccgttcttataatcaa-taacaaata 15172493  T
Q  101 ttaatcgaaggaccgaaaggtgaagtttaatagttgttatttcatcatcacaaatatcaagtgaa 165  Q
    |||||||| ||| |||||| |||||||||||||||||||||   |||||||||||||||||||||    
T  15172494 ttaatcgatggatcgaaagatgaagtttaatagttgttattgattcatcacaaatatcaagtgaa 15172558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 89; E-Value: 3e-43
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 20464546 - 20464704
Alignment:
Q  1 tctaatgacctaatccctatcaaaccaagcctcgaaccctaattttatgtaaatttattttctaatctatttcaccgtttttctaatgaaataacaagta 100  Q
    |||||||||||||||||||||||||||||| |  |||||||||||||||||||| ||||||||||| || |||||||||||| ||||  |||||||||||    
T  20464546 tctaatgacctaatccctatcaaaccaagcgttaaaccctaattttatgtaaatctattttctaatttaattcaccgtttttataat-caataacaagta 20464644  T
Q  101 ttaatcgaaggaccgaaaggtgaagtttaatagttgttatttcatcatcacaaatatcaag 161  Q
    |||||||||||| |||||| ||||||||||||| |||||||   | |||||||||||||||    
T  20464645 ttaatcgaaggatcgaaagatgaagtttaatag-tgttattgattaatcacaaatatcaag 20464704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 86; E-Value: 2e-41
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 17793894 - 17793733
Alignment:
Q  1 tctaatgacctaatccctatcaaaccaagcctcgaaccctaattttatgtaaatttattttctaatctatttcaccgtttttctaatgaaataacaagta 100  Q
    ||||||||| |||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||| ||||||| ||||||| |||||||||    
T  17793894 tctaatgacataatccctatcaaaccaagcctcgaaccctaaatttatgtaaatctattttctaatctatttcatcgtttttataatgaattaacaagta 17793795  T
Q  101 tt-aatcgaaggaccgaaaggtgaagtttaatagttgttatttcatcatcacaaatatcaag 161  Q
    || |||| |   | ||||||| || | || |||||||||| ||||| |||||||||||||||    
T  17793794 ttaaatcaataaatcgaaaggcgagggttgatagttgttaattcataatcacaaatatcaag 17793733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 85; E-Value: 8e-41
Query Start/End: Original strand, 1 - 141
Target Start/End: Complemental strand, 16207627 - 16207488
Alignment:
Q  1 tctaatgacctaatccctatcaaaccaagcctcgaaccctaattttatgtaaatttattttctaatctatttcaccgtttttctaatgaaataacaagta 100  Q
    ||||||||||||||||||||||||||||| |||| ||||||||||||| ||||| |||||||||||||| ||||||||||||  |||  ||||||||||     
T  16207627 tctaatgacctaatccctatcaaaccaagtctcggaccctaattttatctaaatctattttctaatctaattcaccgtttttaaaat-caataacaagtt 16207529  T
Q  101 ttaatcgaaggaccgaaaggtgaagtttaatagttgttatt 141  Q
    ||||||||||||  ||||| |||||||||||||||||||||    
T  16207528 ttaatcgaaggattgaaagatgaagtttaatagttgttatt 16207488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 81; E-Value: 2e-38
Query Start/End: Original strand, 1 - 165
Target Start/End: Original strand, 15162384 - 15162546
Alignment:
Q  1 tctaatgacctaatccctatcaaaccaagcctcgaaccctaattttatgtaaatttattttctaatctatttcaccgtttttctaatgaaataacaagta 100  Q
    ||||| |||||||||| |||||  |||||||||||||||||||||||||||||| |||||||||||||||||||||||| || ||||   ||||||| ||    
T  15162384 tctaacgacctaatcc-tatcatgccaagcctcgaaccctaattttatgtaaatctattttctaatctatttcaccgttcttataat-cgataacaaata 15162481  T
Q  101 ttaatcgaaggaccgaaaggtgaagtttaatagttgttatttcatcatcacaaatatcaagtgaa 165  Q
    |||||||| | | |||||| |||||||||||||||||||||   ||||||||||||| |||||||    
T  15162482 ttaatcgatgaatcgaaagatgaagtttaatagttgttattgattcatcacaaatataaagtgaa 15162546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 70; E-Value: 7e-32
Query Start/End: Original strand, 36 - 165
Target Start/End: Complemental strand, 15471044 - 15470916
Alignment:
Q  36 accctaattttatgtaaatttattttctaatctatttcaccgtttttctaatgaaataacaagtattaatcgaaggaccgaaaggtgaagtttaatagtt 135  Q
    ||||||||||||||||||| ||||||||||||||||| |||||  || |||| || |||||| |||||||||| ||| |||||| |||||||||||||||    
T  15471044 accctaattttatgtaaatctattttctaatctattttaccgtgcttataatcaa-taacaaatattaatcgatggatcgaaagatgaagtttaatagtt 15470946  T
Q  136 gttatttcatcatcacaaatatcaagtgaa 165  Q
    ||||||   |||||||||||||||||||||    
T  15470945 gttattgattcatcacaaatatcaagtgaa 15470916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 26822024 - 26822125
Alignment:
Q  1 tctaatgacctaatccctatcaaaccaagcctcgaaccctaattttatgtaaatttattttctaatct-atttcaccgtttttctaatgaaataacaagt 99  Q
    ||||||||||||||||  |||||| ||||||||||||||||||||||||||||| ||||||||||||| |||||||| ||||| ||||||| ||||||||    
T  26822024 tctaatgacctaatcctaatcaaatcaagcctcgaaccctaattttatgtaaatctattttctaatctaatttcaccatttttataatgaattaacaagt 26822123  T
Q  100 at 101  Q
    ||    
T  26822124 at 26822125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 65; E-Value: 7e-29
Query Start/End: Original strand, 1 - 157
Target Start/End: Original strand, 5399398 - 5399553
Alignment:
Q  1 tctaatgacctaatccctatcaaaccaagcctcgaaccctaattttatgtaaatttattttctaatctatttcaccgtttttctaatgaaataacaagta 100  Q
    ||||||||| ||||||  ||||||||||||||  |||||||||||||||||||  |||||||||||||||||||||||| || ||||  |||||||| ||    
T  5399398 tctaatgacgtaatcctaatcaaaccaagccttaaaccctaattttatgtaaacctattttctaatctatttcaccgttcttataat-caataacaaata 5399496  T
Q  101 ttaatcgaaggaccgaaaggtgaagtttaatagttgttatttcatcatcacaaatat 157  Q
    || || || |||  ||||| ||||||||| |||||||||||   |||||||||||||    
T  5399497 ttgattgatggattgaaagatgaagtttattagttgttattgattcatcacaaatat 5399553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 65; E-Value: 7e-29
Query Start/End: Original strand, 1 - 141
Target Start/End: Complemental strand, 18396416 - 18396277
Alignment:
Q  1 tctaatgacctaatccctatcaaaccaagcctcgaaccctaattttatgtaaatttattttctaatctatttcaccgtttttctaatgaaataacaagta 100  Q
    ||||||||  ||||||  |||||||||||||| || |||||||||||||||||  ||||||| ||||||||||||| || || ||||  |||||||||||    
T  18396416 tctaatgatttaatcctaatcaaaccaagccttgatccctaattttatgtaaacctattttccaatctatttcaccattcttataat-caataacaagta 18396318  T
Q  101 ttaatcgaaggaccgaaaggtgaagtttaatagttgttatt 141  Q
    ||||| || ||| |||||| |||||||||||||||||||||    
T  18396317 ttaattgatggatcgaaagatgaagtttaatagttgttatt 18396277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 65; E-Value: 7e-29
Query Start/End: Original strand, 1 - 165
Target Start/End: Complemental strand, 22601270 - 22601107
Alignment:
Q  1 tctaatgacctaatccctatcaaaccaagcctcgaaccctaattttatgtaaatttattttctaatctatttcaccgtttttctaatgaaataacaagta 100  Q
    ||||||||| |||||   |||||||||| | |  ||||||||||||||||||   || |||||||||||||||| |||| || | || || |||||||||    
T  22601270 tctaatgacataatcataatcaaaccaaactttaaaccctaattttatgtaaccctactttctaatctatttcatcgttcttattatcaa-taacaagta 22601172  T
Q  101 ttaatcgaaggaccgaaaggtgaagtttaatagttgttatttcatcatcacaaatatcaagtgaa 165  Q
    |||||||||||| |||||| |||||||||||||||||||||   ||||||||||||| |||||||    
T  22601171 ttaatcgaaggatcgaaagatgaagtttaatagttgttattgattcatcacaaatattaagtgaa 22601107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 62; E-Value: 4e-27
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 3923806 - 3923907
Alignment:
Q  1 tctaatgacctaatccctatcaaaccaagcctcgaaccctaattttatgtaaatttattttctaatct-atttcaccgtttttctaatgaaataacaagt 99  Q
    ||||||| |||||| ||||||||||||||||||||||||||||||||| ||||| ||||||||||||| | |||||| ||||| ||||||| ||||||||    
T  3923806 tctaatggcctaattcctatcaaaccaagcctcgaaccctaattttatataaatctattttctaatctaaattcaccatttttataatgaattaacaagt 3923905  T
Q  100 at 101  Q
    ||    
T  3923906 at 3923907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 62; E-Value: 4e-27
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 12657956 - 12657855
Alignment:
Q  1 tctaatgacctaatccctatcaaaccaagcctcgaaccctaattttatgtaaatttattttctaatct-atttcaccgtttttctaatgaaataacaagt 99  Q
    |||||| |||||||| ||||||||||||| |||||||||||||||||||||||| ||||||||||| | |||| ||||||||| ||||||| ||||||||    
T  12657956 tctaattacctaatcactatcaaaccaagtctcgaaccctaattttatgtaaatctattttctaatataatttaaccgtttttataatgaattaacaagt 12657857  T
Q  100 at 101  Q
    ||    
T  12657856 at 12657855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 62; E-Value: 4e-27
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 12660359 - 12660259
Alignment:
Q  1 tctaatgacctaatccctatcaaaccaagcctcgaaccctaattttatgtaaatttattttctaatct-atttcaccgtttttctaatgaaataacaagt 99  Q
    |||||||| |||||||||||||||||||||||||||||| ||||||| |||||| || |||||||||| |||||||||||||| ||||||| ||||||||    
T  12660359 tctaatgatctaatccctatcaaaccaagcctcgaacccaaatttta-gtaaatctaatttctaatctaatttcaccgtttttataatgaattaacaagt 12660261  T
Q  100 at 101  Q
    ||    
T  12660260 at 12660259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 62; E-Value: 4e-27
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 28734056 - 28733955
Alignment:
Q  1 tctaatgacctaatccctatcaaaccaagcctcgaaccctaattttatgtaaatttattttctaatct-atttcaccgtttttctaatgaaataacaagt 99  Q
    ||||||||||||||||  |||||| ||||||||||||| ||||||||||||||| || |||||||||| |||||||||||||| ||||||| ||||||||    
T  28734056 tctaatgacctaatcctgatcaaatcaagcctcgaaccttaattttatgtaaatctactttctaatctaatttcaccgtttttataatgaattaacaagt 28733957  T
Q  100 at 101  Q
    ||    
T  28733956 at 28733955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 23639762 - 23639694
Alignment:
Q  1 tctaatgacctaatccctatcaaaccaagcctcgaaccctaattttatgtaaatttattttctaatcta 69  Q
    |||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  23639762 tctaatgacctaattcctatcaaaccaagcctagaaccctaattttatgtaaatttattttctaatcta 23639694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 23523864 - 23523763
Alignment:
Q  1 tctaatgacctaatccctatcaaaccaagcctcgaaccctaattttatgtaaatttattttctaatct-atttcaccgtttttctaatgaaataacaagt 99  Q
    ||||||||| ||||||  |||||||||||||||||||||||||||||| ||||| || |||||||||| ||||||| |||||| ||||||| ||||||||    
T  23523864 tctaatgacttaatcctaatcaaaccaagcctcgaaccctaattttatataaatctactttctaatctaatttcactgtttttgtaatgaattaacaagt 23523765  T
Q  100 at 101  Q
    ||    
T  23523764 at 23523763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 57; E-Value: 4e-24
Query Start/End: Original strand, 1 - 141
Target Start/End: Complemental strand, 14992192 - 14992053
Alignment:
Q  1 tctaatgacctaatccctatcaaaccaagcctcgaaccctaattttatgtaaatttattttctaatctatttcaccgtttttctaatgaaataacaagta 100  Q
    ||||||||| ||||||  |||||| ||||| |  |||||||||||||| ||||  || |||||||||||||||||| || || |||| || |||||| ||    
T  14992192 tctaatgacataatcctaatcaaatcaagctttaaaccctaattttatataaacctaatttctaatctatttcaccattcttataatcaa-taacaaata 14992094  T
Q  101 ttaatcgaaggaccgaaaggtgaagtttaatagttgttatt 141  Q
    |||||||||||| | |||| |||||||||||||||||||||    
T  14992093 ttaatcgaaggatcaaaagatgaagtttaatagttgttatt 14992053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 4 - 157
Target Start/End: Complemental strand, 13217262 - 13217115
Alignment:
Q  4 aatgacctaatccctatcaaaccaagcctcgaaccctaattttatgtaaatttattttctaatctatttcaccgtttttctaatgaaataacaagtatta 103  Q
    |||||||||||||  ||||||||||||||| |||||||||||| |     | ||||||||||||||||||||| || || |||| || |||||| |||||    
T  13217262 aatgacctaatcctaatcaaaccaagcctcaaaccctaatttttt-----tgtattttctaatctatttcacctttcttataatcaa-taacaaatatta 13217169  T
Q  104 atcgaaggaccgaaaggtgaagtttaatagttgttatttcatcatcacaaatat 157  Q
    ||||| ||| |||||| |||||||||| | ||||||||   |||||||||||||    
T  13217168 atcgacggatcgaaagatgaagtttaacaattgttattgattcatcacaaatat 13217115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 52; E-Value: 4e-21
Query Start/End: Original strand, 19 - 101
Target Start/End: Original strand, 18627617 - 18627700
Alignment:
Q  19 atcaaaccaagcctcgaaccctaattttatgtaaatttattttctaatct-atttcaccgtttttctaatgaaataacaagtat 101  Q
    |||||||||||||||||||||||||||||| ||||| || |||||||||| |||||||||||| | ||||||| ||||||||||    
T  18627617 atcaaaccaagcctcgaaccctaattttatataaatctactttctaatctaatttcaccgtttatataatgaattaacaagtat 18627700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 25923303 - 25923213
Alignment:
Q  1 tctaatgacctaatccctatcaaaccaagcctcgaaccctaattttatgtaaatttattttctaatct-atttcaccgtttttctaatgaa 90  Q
    ||||||||| || |||  |||||||||||||||||||||||||||||| ||||| || |||||||||| |||||||||||||| |||||||    
T  25923303 tctaatgacatattcctaatcaaaccaagcctcgaaccctaattttatataaatctactttctaatctaatttcaccgtttttataatgaa 25923213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 49; E-Value: 2e-19
Query Start/End: Original strand, 19 - 98
Target Start/End: Original strand, 18993358 - 18993438
Alignment:
Q  19 atcaaaccaagcctcgaaccctaattttatgtaaatttattttctaatct-atttcaccgtttttctaatgaaataacaag 98  Q
    ||||||| |||||||||||||||||||| ||||||| || |||||||||| |||||||||||||| ||||||| |||||||    
T  18993358 atcaaacaaagcctcgaaccctaattttctgtaaatctactttctaatctaatttcaccgtttttataatgaattaacaag 18993438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 19993766 - 19993861
Alignment:
Q  1 tctaatgacctaatccctatcaaaccaagcctcgaaccctaattttatgtaaatttattttctaatct-atttcaccgtttttctaatgaaataac 95  Q
    |||||||| |||||||  |||||||||| ||||||||||||||||||| ||||| || ||| |||||| |||||||||||||| ||||||| ||||    
T  19993766 tctaatgaactaatcctaatcaaaccaaacctcgaaccctaattttatataaatctactttttaatctaatttcaccgtttttataatgaattaac 19993861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 47; E-Value: 4e-18
Query Start/End: Original strand, 35 - 141
Target Start/End: Original strand, 29093748 - 29093853
Alignment:
Q  35 aaccctaattttatgtaaatttattttctaatctatttcaccgtttttctaatgaaataacaagtattaatcgaaggaccgaaaggtgaagtttaatagt 134  Q
    ||||||||||||||||||   || ||||||||||||||||||||| || ||||  ||||||||  ||||||||| ||| |||||| | ||||||||||||    
T  29093748 aaccctaattttatgtaaccctaatttctaatctatttcaccgttcttataat-caataacaaacattaatcgatggatcgaaagattaagtttaatagt 29093846  T
Q  135 tgttatt 141  Q
    |||||||    
T  29093847 tgttatt 29093853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 17522269 - 17522201
Alignment:
Q  1 tctaatgacctaatccctatcaaaccaagcctcgaaccctaattttatgtaaattta-ttttctaatcta 69  Q
    |||||||||||||||| ||||||||||||||| ||||||||||||||||||||| || ||||||||||||    
T  17522269 tctaatgacctaatcc-tatcaaaccaagcctagaaccctaattttatgtaaatctatttttctaatcta 17522201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 20218392 - 20218295
Alignment:
Q  1 tctaatgacctaatccctatcaaaccaagcctcgaaccctaattttatgtaaatttattttctaatct-atttcaccgtttttctaatgaaataacaa 97  Q
    ||||||||| ||||||  |||||||||||||   |||||||||||||| ||||| || |||||||||| |||||||||||||| ||||||| ||||||    
T  20218392 tctaatgacataatcctaatcaaaccaagccataaaccctaattttatataaatctactttctaatctaatttcaccgtttttataatgaattaacaa 20218295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 22112417 - 22112320
Alignment:
Q  1 tctaatgacctaatccctatcaaaccaagcctcgaaccctaattttatgtaaatttattttctaatct-atttcaccgtttttctaatgaaataacaa 97  Q
    ||||||||| ||||||  |||||||||||||   |||||||||||||| ||||| || |||||||||| |||||||||||||| ||||||| ||||||    
T  22112417 tctaatgacataatcctaatcaaaccaagccataaaccctaattttatataaatctactttctaatctaatttcaccgtttttataatgaattaacaa 22112320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 45; E-Value: 6e-17
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 34108896 - 34108829
Alignment:
Q  1 tctaatgacctaatccctatcaaaccaagcctcgaaccctaattttatgtaaatttattttctaatcta 69  Q
    |||||||||||||||||||||||||||||||| ||||||||| ||||||| ||| || |||||||||||    
T  34108896 tctaatgacctaatccctatcaaaccaagcctagaaccctaa-tttatgtcaatctaatttctaatcta 34108829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 42; E-Value: 0.000000000000004
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 13168544 - 13168613
Alignment:
Q  1 tctaatgacctaatccctatcaaaccaagcctcgaaccctaattttatgtaaattta-ttttctaatcta 69  Q
    ||||||||||||||||   ||||||||||||| ||||||||||||||||||||| || ||||||||||||    
T  13168544 tctaatgacctaatcctattcaaaccaagcctagaaccctaattttatgtaaatatatttttctaatcta 13168613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 42; E-Value: 0.000000000000004
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 25031135 - 25031038
Alignment:
Q  1 tctaatgacctaatccctatcaaaccaagcctcgaaccctaattttatgtaaatttattttctaatct-atttcaccgtttttctaatgaaataacaa 97  Q
    ||||||||| |||||   |||||| ||||||||||||| ||||||||| ||||| || |||||||||| ||||||| |||||| ||||||| ||||||    
T  25031135 tctaatgacataatcataatcaaatcaagcctcgaaccttaattttatataaatctaatttctaatctaatttcactgtttttataatgaattaacaa 25031038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 40; E-Value: 0.00000000000006
Query Start/End: Original strand, 3 - 97
Target Start/End: Complemental strand, 25339152 - 25339057
Alignment:
Q  3 taatgacctaatccctatcaaaccaagcctcgaaccctaattttatgtaaatttattttctaatc-tatttcaccgtttttctaatgaaataacaa 97  Q
    ||||||| ||||||  ||||||||||| || ||||||||||||||| ||||| || |||||||||  |||||||| ||||| ||||||| ||||||    
T  25339152 taatgacataatcctaatcaaaccaagtcttgaaccctaattttatataaatctactttctaatcgaatttcaccatttttataatgaattaacaa 25339057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 39; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 23517260 - 23517206
Alignment:
Q  1 tctaatgacctaatccctatcaaaccaagcctcgaaccctaattttatgtaaatt 55  Q
    ||||||||||||||||  |||||||||||||||||||||||||| ||| ||||||    
T  23517260 tctaatgacctaatcctaatcaaaccaagcctcgaaccctaattctatataaatt 23517206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 38; E-Value: 0.0000000000009
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 8603669 - 8603750
Alignment:
Q  1 tctaatgacctaatccctatcaaaccaagcctcgaaccctaattttatgtaaatttattttctaatct-atttcaccgtttt 81  Q
    ||||||||| ||||||  ||||||||||||||  ||||||||||||||||||   ||||||||||||| | |||||||||||    
T  8603669 tctaatgacataatcctaatcaaaccaagccttaaaccctaattttatgtaaccctattttctaatctaaattcaccgtttt 8603750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 38; E-Value: 0.0000000000009
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 9414553 - 9414621
Alignment:
Q  1 tctaatgacctaatccctatcaaaccaagcctcgaaccctaattttatgtaaattta-ttttctaatcta 69  Q
    |||||||||||||||| |||||| |||||||| ||||||||||||||||| ||| || ||||||||||||    
T  9414553 tctaatgacctaatcc-tatcaagccaagcctagaaccctaattttatgtgaatctatttttctaatcta 9414621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 38; E-Value: 0.0000000000009
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 19612654 - 19612554
Alignment:
Q  1 tctaatgacctaatccctatcaaaccaagcctcgaaccctaattttatgtaaatttattttctaatct-atttcaccgtttttctaatgaaataacaagt 99  Q
    ||||| ||||||||||   |||| |||||| ||||||||||||||||| | ||| || |||||||||| |||||||||||||| ||| ||| ||||||||    
T  19612654 tctaacgacctaatcctagtcaagccaagcttcgaaccctaattttatat-aatctactttctaatctaatttcaccgtttttataaagaattaacaagt 19612556  T
Q  100 at 101  Q
    ||    
T  19612555 at 19612554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 38; E-Value: 0.0000000000009
Query Start/End: Original strand, 5 - 66
Target Start/End: Complemental strand, 21237847 - 21237786
Alignment:
Q  5 atgacctaatccctatcaaaccaagcctcgaaccctaattttatgtaaatttattttctaat 66  Q
    |||||||||| |||||||||| |||| | ||||| ||||||||||||||| |||||||||||    
T  21237847 atgacctaattcctatcaaactaagcatagaaccttaattttatgtaaatctattttctaat 21237786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 4741154 - 4741251
Alignment:
Q  1 tctaatgacctaatccctatcaaaccaagcctcgaaccctaattttatgtaaatttattttctaatct-atttcaccgtttttctaatgaaataacaa 97  Q
    ||||||||| ||||||  |||||||||| ||   |||||||||||||| ||||| || |||||||||| ||||||| |||||  ||||||| ||||||    
T  4741154 tctaatgacgtaatcctaatcaaaccaaaccataaaccctaattttatataaatctactttctaatctaatttcactgttttcataatgaattaacaa 4741251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 3 - 87
Target Start/End: Complemental strand, 20105544 - 20105459
Alignment:
Q  3 taatgacctaatccctatcaaaccaagcctcgaaccctaattttatgtaaatttattttctaatct-atttcaccgtttttctaat 87  Q
    ||||||| ||||||  |||||||||| ||   ||||||| |||||| ||||||||||||||||||| ||||||| |||||| ||||    
T  20105544 taatgacgtaatcctaatcaaaccaaaccataaaccctagttttatataaatttattttctaatctaatttcactgtttttataat 20105459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 26138831 - 26138928
Alignment:
Q  1 tctaatgacctaatccctatcaaaccaagcctcgaaccctaattttatgtaaatttattttctaatct-atttcaccgtttttctaatgaaataacaa 97  Q
    ||||||||| ||||||  |||||||||| ||   |||||||||||||| |||||  | |||||||||| |||||||||||||  ||||||| ||||||    
T  26138831 tctaatgacgtaatcctaatcaaaccaaaccataaaccctaattttatataaatccactttctaatctaatttcaccgttttgataatgaattaacaa 26138928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 29254153 - 29254250
Alignment:
Q  1 tctaatgacctaatccctatcaaaccaagcctcgaaccctaattttatgtaaatttattttctaatct-atttcaccgtttttctaatgaaataacaa 97  Q
    ||||||||| ||||||  |||||||||| ||   |||||||||| ||| ||||| || |||||||||| |||||||||||| | ||||||| ||||||    
T  29254153 tctaatgacgtaatcctaatcaaaccaaaccataaaccctaattatatataaatatactttctaatctaatttcaccgtttctataatgaattaacaa 29254250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 32796423 - 32796355
Alignment:
Q  1 tctaatgacctaatccctatcaaaccaagcctcgaaccctaattttatgtaaattta-ttttctaatcta 69  Q
    |||||||||||||||| ||| || |||||||| ||||||||||||||||| ||| || ||||||||||||    
T  32796423 tctaatgacctaatcc-tataaagccaagcctagaaccctaattttatgtgaatctatttttctaatcta 32796355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 4 - 81
Target Start/End: Original strand, 6795113 - 6795191
Alignment:
Q  4 aatgacctaatccctatcaaaccaagcctcgaaccctaattttatgtaaatttattttctaatct-atttcaccgtttt 81  Q
    |||||| ||||||  ||||||||||||||  ||||||||||||||||||   || |||||||||| | |||||||||||    
T  6795113 aatgacataatcctaatcaaaccaagccttaaaccctaattttatgtaaccctaatttctaatctaaattcaccgtttt 6795191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 25964085 - 25964166
Alignment:
Q  1 tctaatgacctaatccctatcaaaccaagcctcgaaccctaattttatgtaaatttattttctaatct-atttcaccgtttt 81  Q
    ||||||||| ||||||  ||||||||||||||  |||| |||||||||||||   || |||||||||| | |||||||||||    
T  25964085 tctaatgacataatcctaatcaaaccaagccttaaaccataattttatgtaaccataatttctaatctaaattcaccgtttt 25964166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 25968732 - 25968813
Alignment:
Q  1 tctaatgacctaatccctatcaaaccaagcctcgaaccctaattttatgtaaatttattttctaatct-atttcaccgtttt 81  Q
    ||||||||| ||||||  ||||||||||||||  |||| |||||||||||||   || |||||||||| | |||||||||||    
T  25968732 tctaatgacataatcctaatcaaaccaagccttaaaccataattttatgtaaccataatttctaatctaaattcaccgtttt 25968813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 1626320 - 1626371
Alignment:
Q  1 tctaatgacctaatccctatcaaaccaagcctcgaaccctaattttatgtaa 52  Q
    ||||||||| ||||||  ||||| ||||||||  ||||||||||||||||||    
T  1626320 tctaatgacataatcctaatcaagccaagccttaaaccctaattttatgtaa 1626371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 3 - 97
Target Start/End: Original strand, 25507761 - 25507856
Alignment:
Q  3 taatgacctaatccctatcaaaccaagcctcgaaccctaattttatgtaaatttattttctaatct-atttcaccgtttttctaatgaaataacaa 97  Q
    ||||||| ||||||  |||||||||| ||    ||||||||||||| |||||  | |||||||||| |||||||||||||  ||||||| ||||||    
T  25507761 taatgacgtaatcctaatcaaaccaaaccatacaccctaattttatataaatccactttctaatctaatttcaccgttttgataatgaattaacaa 25507856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 25949491 - 25949542
Alignment:
Q  1 tctaatgacctaatccctatcaaaccaagcctcgaaccctaattttatgtaa 52  Q
    ||||||||| ||||||  |||||| |||||||  ||||||||||||||||||    
T  25949491 tctaatgacataatcctaatcaaagcaagccttaaaccctaattttatgtaa 25949542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 35 - 97
Target Start/End: Original strand, 26018162 - 26018225
Alignment:
Q  35 aaccctaattttatgtaaatttattttctaatct-atttcaccgtttttctaatgaaataacaa 97  Q
    |||||||||||||| |||||  | |||||||||| |||||||||||||  ||||||| ||||||    
T  26018162 aaccctaattttatataaatccactttctaatctaatttcaccgttttgataatgaattaacaa 26018225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 35 - 97
Target Start/End: Original strand, 26157535 - 26157598
Alignment:
Q  35 aaccctaattttatgtaaatttattttctaatct-atttcaccgtttttctaatgaaataacaa 97  Q
    |||||||||||||| |||||  | |||||||||| |||||||||||||  ||||||| ||||||    
T  26157535 aaccctaattttatataaatccactttctaatctaatttcaccgttttgataatgaattaacaa 26157598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 133; Significance: 2e-69; HSPs: 35)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 133; E-Value: 2e-69
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 679412 - 679252
Alignment:
Q  1 tctaatgacctaatccctatcaaaccaagcctcgaaccctaattttatgtaaatttattttctaatctatttcaccgtttttctaatgaaataacaagta 100  Q
    |||||||||||||||||||||||||||| ||| |||||||||| |||||||||| ||||||||||||||||||| |||||||||||||||||||||||||    
T  679412 tctaatgacctaatccctatcaaaccaaacctagaaccctaatcttatgtaaatctattttctaatctatttcatcgtttttctaatgaaataacaagta 679313  T
Q  101 ttaatcgaaggaccgaaaggtgaagtttaatagttgttatttcatcatcacaaatatcaag 161  Q
    |||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  679312 ttaatctaaggactgaaaggtgaagtttaatagttgttatttcatcatcacaaatatcaag 679252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 133; E-Value: 2e-69
Query Start/End: Original strand, 1 - 165
Target Start/End: Original strand, 38877575 - 38877739
Alignment:
Q  1 tctaatgacctaatccctatcaaaccaagcctcgaaccctaattttatgtaaatttattttctaatctatttcaccgtttttctaatgaaataacaagta 100  Q
    ||||||||||||||||||||||||||||| ||||||||||||| |||||||||| ||||||||||| |||||||  |||| |||||||||||||||||||    
T  38877575 tctaatgacctaatccctatcaaaccaagactcgaaccctaatcttatgtaaatctattttctaatttatttcattgtttatctaatgaaataacaagta 38877674  T
Q  101 ttaatcgaaggaccgaaaggtgaagtttaatagttgttatttcatcatcacaaatatcaagtgaa 165  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  38877675 ttaatcgaaggaccgaaatgtgaagtttaatagttgttatttcatcatcacaaatatcaagtgaa 38877739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 121; E-Value: 3e-62
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 15523198 - 15523358
Alignment:
Q  1 tctaatgacctaatccctatcaaaccaagcctcgaaccctaattttatgtaaatttattttctaatctatttcaccgtttttctaatgaaataacaagta 100  Q
    |||||||||||||||||||||||||||||||| ||||| |||| |||||||||| ||||||| |||| ||||  | ||||||||| ||||||||||||||    
T  15523198 tctaatgacctaatccctatcaaaccaagcctagaaccgtaatcttatgtaaatctattttcaaatcaattttgcagtttttctactgaaataacaagta 15523297  T
Q  101 ttaatcgaaggaccgaaaggtgaagtttaatagttgttatttcatcatcacaaatatcaag 161  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15523298 ttaatcgaaggaccgaaaggtgaagtttaatagttgttatttcatcatcacaaatatcaag 15523358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 117; E-Value: 7e-60
Query Start/End: Original strand, 1 - 165
Target Start/End: Original strand, 17911755 - 17911919
Alignment:
Q  1 tctaatgacctaatccctatcaaaccaagcctcgaaccctaattttatgtaaatttattttctaatctatttcaccgtttttctaatgaaataacaagta 100  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||| |||||||||||| || ||||||| |||||||||    
T  17911755 tctaatgacctaatccctatcaaaccaagcttcgaaccctaattttatgtaaatctattttctaatatatttcaccgttcttataatgaattaacaagta 17911854  T
Q  101 ttaatcgaaggaccgaaaggtgaagtttaatagttgttatttcatcatcacaaatatcaagtgaa 165  Q
    ||||| || |||| ||||||||||||||||||||| ||| ||||| |||||||||||||||||||    
T  17911855 ttaattgatggactgaaaggtgaagtttaatagttattaattcataatcacaaatatcaagtgaa 17911919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 109; E-Value: 4e-55
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 4465703 - 4465543
Alignment:
Q  1 tctaatgacctaatccctatcaaaccaagcctcgaaccctaattttatgtaaatttattttctaatctatttcaccgtttttctaatgaaataacaagta 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| || |||||||| ||| ||||||| |||||||||    
T  4465703 tctaatgacctaatccctatcaaaccaagcctcgaaccctaattttatgtaaatctattttctaatttagttcaccgtatttgtaatgaattaacaagta 4465604  T
Q  101 ttaatcgaaggaccgaaaggtgaagtttaatagttgttatttcatcatcacaaatatcaag 161  Q
    ||| |||| |||| ||||||||||||||||| ||||||| ||||| |||| ||||||||||    
T  4465603 ttattcgagggactgaaaggtgaagtttaatggttgttaattcataatcataaatatcaag 4465543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 109; E-Value: 4e-55
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 30063879 - 30063720
Alignment:
Q  1 tctaatgacctaatccctatcaaaccaagcctcgaaccctaattttatgtaaatttattttctaatctatttcaccgtttttctaatgaaataacaagta 100  Q
    ||||||||||||||||||||||| ||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||| ||||  |||||||||||    
T  30063879 tctaatgacctaatccctatcaagccaagcctcgaaccctaatcttatgtaaatctattttctaatctatttcaccgtttttataat-caataacaagta 30063781  T
Q  101 ttaatcgaaggaccgaaaggtgaagtttaatagttgttatttcatcatcacaaatatcaag 161  Q
    |||||||| ||| |||||| |||||||||||||||||||||   |||||||||||||||||    
T  30063780 ttaatcgatggatcgaaagatgaagtttaatagttgttattgattcatcacaaatatcaag 30063720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 83; E-Value: 1e-39
Query Start/End: Original strand, 19 - 157
Target Start/End: Complemental strand, 11483755 - 11483618
Alignment:
Q  19 atcaaaccaagcctcgaaccctaattttatgtaaatttattttctaatctatttcaccgtttttctaatgaaataacaagtattaatcgaaggaccgaaa 118  Q
    |||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||| || ||||  |||||||| |||||||||| ||| |||||    
T  11483755 atcaaaccaagcctcgaaccttaattttatgtaaatctattttctaatctatttcaccgttcttataat-caataacaaatattaatcgatggatcgaaa 11483657  T
Q  119 ggtgaagtttaatagttgttatttcatcatcacaaatat 157  Q
    | |||||||||||||||||||||   |||||||||||||    
T  11483656 gatgaagtttaatagttgttattgattcatcacaaatat 11483618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 82; E-Value: 5e-39
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 4983066 - 4982906
Alignment:
Q  1 tctaatgacctaatccctatcaaaccaagcctcgaaccctaattttatgtaaatttattttctaatctatttcaccgtttttctaatgaaataacaagta 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||| ||||||||| ||||||| |||||||||    
T  4983066 tctaatgacctaatccctatcaaaccaagcctcgaaccctaattttatgtaaatcta-tttctaatctatttgaccgtttttgtaatgaattaacaagta 4982968  T
Q  101 t-taatcgaaggaccgaaaggtgaagtttaatagttgttatttcatcatcacaaatatcaag 161  Q
    |  |||| |   | |||||| ||| | |||||| |||||| ||||| |||||||||||||||    
T  4982967 tcaaatcaataaaacgaaagttgagggttaatacttgttaattcataatcacaaatatcaag 4982906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 80; E-Value: 8e-38
Query Start/End: Original strand, 2 - 101
Target Start/End: Original strand, 4541338 - 4541437
Alignment:
Q  2 ctaatgacctaatccctatcaaaccaagcctcgaaccctaattttatgtaaatttattttctaatctatttcaccgtttttctaatgaaataacaagtat 101  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||| ||||||||||||||| ||||||| ||||||||||    
T  4541338 ctaatgacctaatccctatcaaaccaagcatcgaaccctaattttatgtaaatctattttctaatatatttcaccgtttttataatgaattaacaagtat 4541437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 75; E-Value: 8e-35
Query Start/End: Original strand, 11 - 160
Target Start/End: Original strand, 14925695 - 14925844
Alignment:
Q  11 taatccctatcaaaccaagcctcgaaccctaattttatgtaaatttattttctaatcta-tttcaccgtttttctaatgaaataacaagtattaatcgaa 109  Q
    |||| ||||||||||||||||| |||||||||| |||| ||||| |||||||||||||| |||||  ||||| | ||   | ||||||||||||| ||||    
T  14925695 taattcctatcaaaccaagcctagaaccctaatcttatttaaatatattttctaatctaatttcattgtttt-caaactcagtaacaagtattaaacgaa 14925793  T
Q  110 ggaccgaaaggtgaagtttaatagttgttatttcatcatcacaaatatcaa 160  Q
    ||||||||||||||||| |||||||||||||||||||||| ||||||||||    
T  14925794 ggaccgaaaggtgaagtataatagttgttatttcatcatctcaaatatcaa 14925844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 75; E-Value: 8e-35
Query Start/End: Original strand, 11 - 160
Target Start/End: Original strand, 15349161 - 15349310
Alignment:
Q  11 taatccctatcaaaccaagcctcgaaccctaattttatgtaaatttattttctaatcta-tttcaccgtttttctaatgaaataacaagtattaatcgaa 109  Q
    |||| ||||||||||||||||| |||||||||| |||| ||||| |||||||||||||| |||||  ||||| | ||   | ||||||||||||| ||||    
T  15349161 taattcctatcaaaccaagcctagaaccctaatcttatttaaatatattttctaatctaatttcattgtttt-caaactcagtaacaagtattaaacgaa 15349259  T
Q  110 ggaccgaaaggtgaagtttaatagttgttatttcatcatcacaaatatcaa 160  Q
    ||||||||||||||||| |||||||||||||||||||||| ||||||||||    
T  15349260 ggaccgaaaggtgaagtataatagttgttatttcatcatctcaaatatcaa 15349310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 60; E-Value: 7e-26
Query Start/End: Original strand, 22 - 157
Target Start/End: Original strand, 46274288 - 46274422
Alignment:
Q  22 aaaccaagcctcgaaccctaattttatgtaaatttattttctaatctatttcaccgtttttctaatgaaataacaagtattaatcgaaggaccgaaaggt 121  Q
    |||||||||||  ||||||||||||||||||   || ||||||||||||||||||||| || ||||  | |||||| |||||||||| ||| |||||| |    
T  46274288 aaaccaagccttaaaccctaattttatgtaaccctaatttctaatctatttcaccgttcttataatcca-taacaaatattaatcgatggatcgaaagat 46274386  T
Q  122 gaagtttaatagttgttatttcatcatcacaaatat 157  Q
    ||||||||||||||||||||   |||||||||||||    
T  46274387 gaagtttaatagttgttattgattcatcacaaatat 46274422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 3 - 157
Target Start/End: Original strand, 1462719 - 1462872
Alignment:
Q  3 taatgacctaatccctatcaaaccaagcctcgaaccctaattttatgtaaatttattttctaatctatttcaccgtttttctaatgaaataacaagtatt 102  Q
    ||||||| ||||||  |||||||||||||| ||||||||||||||||| ||  || |||||||| |||||||||||| || ||||  |||||||| ||||    
T  1462719 taatgacataatcctaatcaaaccaagccttgaaccctaattttatgtcaacctaatttctaatatatttcaccgttcttataat-caataacaaatatt 1462817  T
Q  103 aatcgaaggaccgaaaggtgaagtttaatagttgttatttcatcatcacaaatat 157  Q
    |||  | ||| |||||| ||||||||| |||||||||||   |||||||||||||    
T  1462818 aattaatggatcgaaagatgaagtttattagttgttattgattcatcacaaatat 1462872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 157
Target Start/End: Complemental strand, 16897181 - 16897025
Alignment:
Q  1 tctaatgacctaatccctatcaaa-ccaagcctcgaaccctaattttatgtaaatttattttctaatctatttcaccgtttttctaatgaaataacaagt 99  Q
    ||||||||| ||||||  |||||| ||||||||  ||||||||||||||||||   || ||| ||||||||||||||||| || |||| || |||||| |    
T  16897181 tctaatgacgtaatcctaatcaaaaccaagccttaaaccctaattttatgtaaccctaatttttaatctatttcaccgttcttataatcaa-taacaaat 16897083  T
Q  100 attaatcgaaggaccgaaaggtgaagtttaatagttgttatttcatcatcacaaatat 157  Q
    ||||||||| ||| |||||| ||||||||||||||| |||||   |||||||||||||    
T  16897082 attaatcgatggatcgaaagatgaagtttaatagtttttattgattcatcacaaatat 16897025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 1614142 - 1614268
Alignment:
Q  1 tctaatgacctaatccctatcaaaccaagcctcgaaccctaattttatgtaaatttattttctaatctatttcaccgtttttctaatgaaataacaagta 100  Q
    ||||||||| ||||||  |||||||||||| |  ||||||||||||||||||  ||| ||||||||||||||||||||| || ||||  |||||| ||||    
T  1614142 tctaatgacataatcctaatcaaaccaagctttaaaccctaattttatgtaaccttactttctaatctatttcaccgttcttataat-caataactagta 1614240  T
Q  101 ttaatcgaaggaccgaaaggtgaagttt 128  Q
    ||||||||| || |||||| ||||||||    
T  1614241 ttaatcgaatgatcgaaagatgaagttt 1614268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 4256534 - 4256433
Alignment:
Q  1 tctaatgacctaatccctatcaaaccaagcctcgaaccctaattttatgtaaatttattttctaatct-atttcaccgtttttctaatgaaataacaagt 99  Q
    |||||| |||||||||  ||||||||||||||| ||||||||||||||||||||  | |||||||||| |||||||| ||||| ||||||| ||||||||    
T  4256534 tctaataacctaatcctaatcaaaccaagcctcaaaccctaattttatgtaaatccactttctaatctaatttcaccatttttataatgaattaacaagt 4256435  T
Q  100 at 101  Q
    ||    
T  4256434 at 4256433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 17206313 - 17206252
Alignment:
Q  1 tctaatgacctaatccctatcaaaccaagcctcgaaccctaattttatgtaaatttattttc 62  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  17206313 tctaatgacataatccctatcaaaccaagcctcgaaccctaattttatgtaaatctattttc 17206252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 92 - 160
Target Start/End: Original strand, 1864563 - 1864631
Alignment:
Q  92 taacaagtattaatcgaaggaccgaaaggtgaagtttaatagttgttatttcatcatcacaaatatcaa 160  Q
    ||||||||||||| | ||||||||||| |||||||||||||||||||||||||||||| ||||||||||    
T  1864563 taacaagtattaaacaaaggaccgaaatgtgaagtttaatagttgttatttcatcatctcaaatatcaa 1864631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 21005443 - 21005346
Alignment:
Q  1 tctaatgacctaatccctatcaaaccaagcctcgaaccctaattttatgtaaatttattttctaatct-atttcaccgtttttctaatgaaataacaa 97  Q
    ||||||||| ||||||  |||||||||||||  ||||||||||||||| ||||| || |||||||||| ||||| |||||||| ||||||| ||||||    
T  21005443 tctaatgacataatcctaatcaaaccaagccatgaaccctaattttatataaatctactttctaatctaatttccccgtttttataatgaattaacaa 21005346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 44; E-Value: 2e-16
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 4460680 - 4460621
Alignment:
Q  1 tctaatgacctaatccctatcaaaccaagcctcgaaccctaattttatgtaaatttattt 60  Q
    ||||||||||||||||  |||||||||||||||||||| ||||||||||||||| |||||    
T  4460680 tctaatgacctaatcctaatcaaaccaagcctcgaaccttaattttatgtaaatctattt 4460621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 42; E-Value: 0.000000000000004
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 4316901 - 4316833
Alignment:
Q  1 tctaatgacctaatccctatcaaaccaagcctcgaaccctaattttatgtaaattta-ttttctaatcta 69  Q
    |||||||||||||||| ||||||||||||||| ||||||||||||||||| ||| || ||||||||||||    
T  4316901 tctaatgacctaatcc-tatcaaaccaagcctagaaccctaattttatgtgaatctatttttctaatcta 4316833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 42; E-Value: 0.000000000000004
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 6712362 - 6712301
Alignment:
Q  1 tctaatgacctaatccctatcaaaccaagcctcgaaccctaattttatgtaaatttattttc 62  Q
    ||||||||||||||||   ||||||||||||| ||||||||||||||||||||| |||||||    
T  6712362 tctaatgacctaatcctattcaaaccaagcctagaaccctaattttatgtaaatctattttc 6712301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 38; E-Value: 0.0000000000009
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 3376433 - 3376352
Alignment:
Q  1 tctaatgacctaatccctatcaaaccaagcctcgaaccctaattttatgtaaatttattttctaatct-atttcaccgtttt 81  Q
    ||||||||| ||||||  ||||||||||||||  ||||||||||||||||||   ||||||||||||| | |||||||||||    
T  3376433 tctaatgacataatcctaatcaaaccaagccttaaaccctaattttatgtaaccctattttctaatctaaattcaccgtttt 3376352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 38; E-Value: 0.0000000000009
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 8787205 - 8787108
Alignment:
Q  1 tctaatgacctaatccctatcaaaccaagcctcgaaccctaattttatgtaaatttattttctaatct-atttcaccgtttttctaatgaaataacaa 97  Q
    ||||||||| ||||||  |||||||||| ||   |||||||||||||| ||||| || |||||||||| ||||| |||||||| ||||||| ||||||    
T  8787205 tctaatgacgtaatcctaatcaaaccaaaccataaaccctaattttatataaatctactttctaatctaatttctccgtttttataatgaattaacaa 8787108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 38; E-Value: 0.0000000000009
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 25034236 - 25034168
Alignment:
Q  1 tctaatgacctaatccctatcaaaccaagcctcgaaccctaattttatgtaaattta-ttttctaatcta 69  Q
    |||||||||||||||| ||||||||||||||| |||||| |||||||||| ||| || ||||||||||||    
T  25034236 tctaatgacctaatcc-tatcaaaccaagcctagaacccaaattttatgtgaatctatttttctaatcta 25034168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 38; E-Value: 0.0000000000009
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 33609894 - 33609991
Alignment:
Q  1 tctaatgacctaatccctatcaaaccaagcctcgaaccctaattttatgtaaatttattttctaatc-tatttcaccgtttttctaatgaaataacaa 97  Q
    ||||||||| ||||||  |||||||||| ||   |||||||||||||| ||||| || |||||||||  |||||||||||||| ||||||| ||||||    
T  33609894 tctaatgacataatcctaatcaaaccaaaccataaaccctaattttatataaatctactttctaatcaaatttcaccgtttttataatgaattaacaa 33609991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 92 - 160
Target Start/End: Complemental strand, 6847660 - 6847592
Alignment:
Q  92 taacaagtattaatcgaaggaccgaaaggtgaagtttaatagttgttatttcatcatcacaaatatcaa 160  Q
    |||||||||||||  |||| ||||||  | |||||||||||||||||| ||||||||| ||||||||||    
T  6847660 taacaagtattaaatgaagtaccgaacagagaagtttaatagttgttacttcatcatctcaaatatcaa 6847592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 6257443 - 6257346
Alignment:
Q  1 tctaatgacctaatccctatcaaaccaagcctcgaaccctaattttatgtaaatttattttctaatct-atttcaccgtttttctaatgaaataacaa 97  Q
    |||||||||  |||||  |||||||||| ||   |||||||||||||| ||||| || |||||||||| ||||||||||||||  |||||| ||||||    
T  6257443 tctaatgacgaaatcctaatcaaaccaaaccataaaccctaattttatataaatctactttctaatctaatttcaccgtttttaaaatgaattaacaa 6257346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 8780366 - 8780269
Alignment:
Q  1 tctaatgacctaatccctatcaaaccaagcctcgaaccctaattttatgtaaatttattttctaatct-atttcaccgtttttctaatgaaataacaa 97  Q
    ||||||||| ||||||  |||||||||| ||   |||||||||||||| ||||| || |||||||||| |||||||| | ||| ||||||| ||||||    
T  8780366 tctaatgacgtaatcctaatcaaaccaaaccataaaccctaattttatataaatctactttctaatctaatttcaccatatttataatgaattaacaa 8780269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 9193935 - 9193838
Alignment:
Q  1 tctaatgacctaatccctatcaaaccaagcctcgaaccctaattttatgtaaatttattttctaatct-atttcaccgtttttctaatgaaataacaa 97  Q
    ||||||||| ||||||  |||||||||| ||   ||| |||||||||| ||||| || |||||||||| |||||| ||||||| ||||||| ||||||    
T  9193935 tctaatgacgtaatcctaatcaaaccaaaccataaactctaattttatataaatatactttctaatctaatttcatcgtttttataatgaattaacaa 9193838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 92 - 149
Target Start/End: Original strand, 11281555 - 11281612
Alignment:
Q  92 taacaagtattaatcgaaggaccgaaaggtgaagtttaatagttgttatttcatcatc 149  Q
    ||||||| |||||  |||||||||||| ||||||||||||| ||||||||| ||||||    
T  11281555 taacaagaattaaatgaaggaccgaaatgtgaagtttaataattgttattttatcatc 11281612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 4090870 - 4090960
Alignment:
Q  1 tctaatgacctaatccctatcaaaccaagcctcgaaccctaattttatgtaaatttattttctaatcta-tttcaccgtttttctaatgaa 90  Q
    ||||||||| ||||||  |||||||||| ||   ||||||| |||||| ||||| || ||| ||||||| ||||||||||||| |||||||    
T  4090870 tctaatgacgtaatcctaatcaaaccaaaccataaaccctagttttatataaatgtactttataatctaatttcaccgtttttataatgaa 4090960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 9562105 - 9562201
Alignment:
Q  1 tctaatgacctaatccctatcaaaccaagcctcgaaccctaattttatgtaaatttattttctaatct-atttcaccgtttttctaatgaaataacaa 97  Q
    ||||||||| ||||||  |||||||||| ||   ||||||||||||||  |||| || |||||||||| |||||||| ||||| ||||||| ||||||    
T  9562105 tctaatgacgtaatcctaatcaaaccaaaccataaaccctaattttat-aaaatctactttctaatctaatttcaccatttttataatgaattaacaa 9562201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 48713617 - 48713698
Alignment:
Q  1 tctaatgacctaatccctatcaaaccaagcctcgaaccctaattttatgtaaatttattttctaatct-atttcaccgtttt 81  Q
    ||||||||| |||||   ||||||||||||||  ||||||||||||||||||   || |||||||||| | |||||||||||    
T  48713617 tctaatgacataatcgtaatcaaaccaagccttaaaccctaattttatgtaaccctaatttctaatctaaattcaccgtttt 48713698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 92 - 160
Target Start/End: Complemental strand, 11268642 - 11268574
Alignment:
Q  92 taacaagtattaatcgaaggaccgaaaggtgaagtttaatagttgttatttcatcatcacaaatatcaa 160  Q
    ||||||| |||||  |||||||| ||  ||||||||||||| ||||||||| ||||||  |||||||||    
T  11268642 taacaagaattaaatgaaggaccaaactgtgaagtttaataattgttattttatcatcttaaatatcaa 11268574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 130; Significance: 1e-67; HSPs: 24)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 130; E-Value: 1e-67
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 22904766 - 22904927
Alignment:
Q  1 tctaatgacctaatccctatcaaaccaagcctcgaaccctaattttatgtaaatttattttctaatctatttcaccgtttt-tctaatgaaataacaagt 99  Q
    |||||||||||||||||||||||||||||||| |||||||||| |||||||||| ||||||||||| || ||||||||||| ||||||| ||||||||||    
T  22904766 tctaatgacctaatccctatcaaaccaagccttgaaccctaatcttatgtaaatctattttctaatataattcaccgttttttctaatggaataacaagt 22904865  T
Q  100 attaatcgaaggaccgaaaggtgaagtttaatagttgttatttcatcatcacaaatatcaag 161  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22904866 attaatcgaaggaccgaaaggtgaagtttaatagttgttatttcatcatcacaaatatcaag 22904927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 125; E-Value: 1e-64
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 24221469 - 24221310
Alignment:
Q  1 tctaatgacctaatccctatcaaaccaagcctcgaaccctaattttatgtaaatttattttctaatctatttcaccgtttttctaatgaaataacaagta 100  Q
    |||||||||||||||||| ||||||||||||| |||||||||| || ||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  24221469 tctaatgacctaatccctgtcaaaccaagcctagaaccctaatcttgtgtaaatctattttctaatctatttcaccgtttttctaatgaaataacaagta 24221370  T
Q  101 ttaatcgaaggaccgaaaggtgaagtttaatagttgttatttcatcatcacaaatatcaag 161  Q
    || |||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||    
T  24221369 tt-atcgaaggaccgaaagatgaagtttaatagttgttatttcgtcatcacaaatatcaag 24221310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 69; E-Value: 3e-31
Query Start/End: Original strand, 1 - 165
Target Start/End: Original strand, 23455752 - 23455915
Alignment:
Q  1 tctaatgacctaatccctatcaaaccaagcctcgaaccctaattttatgtaaatttattttctaatctatttcaccgtttttctaatgaaataacaagta 100  Q
    ||||||||| ||||||   ||||||| ||| |  ||||||||||||||||||   || ||||||||||||||||||||| || |||| || |||||| ||    
T  23455752 tctaatgacataatcctagtcaaaccgagctttaaaccctaattttatgtaaccctaatttctaatctatttcaccgttcttataatcaa-taacaatta 23455850  T
Q  101 ttaatcgaaggaccgaaaggtgaagtttaatagttgttatttcatcatcacaaatatcaagtgaa 165  Q
    |||||||||||| |||||| |||||||||||||||||||||   ||||||||||||| |||||||    
T  23455851 ttaatcgaaggatcgaaagatgaagtttaatagttgttattgattcatcacaaatattaagtgaa 23455915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 64; E-Value: 3e-28
Query Start/End: Original strand, 3 - 101
Target Start/End: Original strand, 24342231 - 24342330
Alignment:
Q  3 taatgacctaatccctatcaaaccaagcctcgaaccctaattttatgtaaatttattttctaatct-atttcaccgtttttctaatgaaataacaagtat 101  Q
    ||||||||||||||  |||||||||||||||||||||||||||||||||||| ||||||||||| | |||||||||||||| ||||||| ||| ||||||    
T  24342231 taatgacctaatcctaatcaaaccaagcctcgaaccctaattttatgtaaatctattttctaatttaatttcaccgtttttataatgaattaataagtat 24342330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 62; E-Value: 4e-27
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 14162054 - 14161953
Alignment:
Q  1 tctaatgacctaatccctatcaaaccaagcctcgaaccctaattttatgtaaatttattttctaatct-atttcaccgtttttctaatgaaataacaagt 99  Q
    ||||||||||||||||  |||||||||||| ||||||||||||||||||||||| || |||||||||| |||||||||||||| ||||||| ||| ||||    
T  14162054 tctaatgacctaatcctgatcaaaccaagcatcgaaccctaattttatgtaaatctaatttctaatctaatttcaccgtttttataatgaattaagaagt 14161955  T
Q  100 at 101  Q
    ||    
T  14161954 at 14161953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 21319593 - 21319694
Alignment:
Q  1 tctaatgacctaatccctatcaaaccaagcctcgaaccctaattttatgtaaatttattttctaatct-atttcaccgtttttctaatgaaataacaagt 99  Q
    ||||||||| ||||||  |||||||||||||||||||||||||||||||||||| ||||||||| ||| | |||||||||||| ||||||| ||| ||||    
T  21319593 tctaatgacttaatcctaatcaaaccaagcctcgaaccctaattttatgtaaatctattttctactctaaattcaccgtttttataatgaattaaaaagt 21319692  T
Q  100 at 101  Q
    ||    
T  21319693 at 21319694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 26854239 - 26854340
Alignment:
Q  1 tctaatgacctaatccctatcaaaccaagcctcgaaccctaattttatgtaaatttattttctaatct-atttcaccgtttttctaatgaaataacaagt 99  Q
    ||||||||||||||||  ||||||||||| |||||||||||||||||  ||||| || |||||||||| |||||| ||||||| ||||||| ||||||||    
T  26854239 tctaatgacctaatcctaatcaaaccaagactcgaaccctaattttagataaatctactttctaatctaatttcatcgtttttataatgaattaacaagt 26854338  T
Q  100 at 101  Q
    ||    
T  26854339 at 26854340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 50; E-Value: 6e-20
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 19792148 - 19792047
Alignment:
Q  1 tctaatgacctaatccctatcaaaccaagcctcgaaccctaattttatgtaaatttattttctaatct-atttcaccgtttttctaatgaaataacaagt 99  Q
    ||||||||||||||||  ||||||| |||| | ||||||||||||||||||||  || |||||||||| |||||||| ||||| ||||||| ||||||||    
T  19792148 tctaatgacctaatcctaatcaaactaagcattgaaccctaattttatgtaaaactactttctaatctaatttcaccatttttataatgaattaacaagt 19792049  T
Q  100 at 101  Q
    ||    
T  19792048 at 19792047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 92 - 159
Target Start/End: Complemental strand, 9798306 - 9798239
Alignment:
Q  92 taacaagtattaatcgaaggaccgaaaggtgaagtttaatagttgttatttcatcatcacaaatatca 159  Q
    ||||||||||||| ||||||| ||||| |||||||||||||||||||||||||| ||| |||||||||    
T  9798306 taacaagtattaaacgaaggatcgaaatgtgaagtttaatagttgttatttcataatctcaaatatca 9798239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 2 - 69
Target Start/End: Complemental strand, 18572232 - 18572165
Alignment:
Q  2 ctaatgacctaatccctatcaaaccaagcctcgaaccctaattttatgtaaatttattttctaatcta 69  Q
    ||||||||||||||||||||||||||||| | |||||||||| || ||||||| ||||||||||||||    
T  18572232 ctaatgacctaatccctatcaaaccaagcatagaaccctaatcttgtgtaaatctattttctaatcta 18572165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 15634473 - 15634541
Alignment:
Q  1 tctaatgacctaatccctatcaaaccaagcctcgaaccctaattttatgtaaattta-ttttctaatcta 69  Q
    |||||||||||||||| ||||||||||||||| ||||||||||||||||||||| || ||||||||||||    
T  15634473 tctaatgacctaatcc-tatcaaaccaagcctagaaccctaattttatgtaaatctatttttctaatcta 15634541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 15636246 - 15636314
Alignment:
Q  1 tctaatgacctaatccctatcaaaccaagcctcgaaccctaattttatgtaaattta-ttttctaatcta 69  Q
    |||||||||||||||| ||||||||||||||| ||||||||||||||||||||| || ||||||||||||    
T  15636246 tctaatgacctaatcc-tatcaaaccaagcctagaaccctaattttatgtaaatctatttttctaatcta 15636314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 41; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 25431960 - 25431892
Alignment:
Q  1 tctaatgacctaatccctatcaaaccaagcctcgaaccctaattttatgtaaatttattttctaatcta 69  Q
    ||||||||| |||| ||||||||||||||||| |||||||||| |||| | ||| ||||||||||||||    
T  25431960 tctaatgacttaattcctatcaaaccaagcctagaaccctaatcttatatgaatctattttctaatcta 25431892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 40; E-Value: 0.00000000000006
Query Start/End: Original strand, 19 - 81
Target Start/End: Original strand, 6279937 - 6280000
Alignment:
Q  19 atcaaaccaagcctcgaaccctaattttatgtaaatttattttctaatct-atttcaccgtttt 81  Q
    |||||||||||||| ||||||||||||||| |||||||| |||||||||| | |||||||||||    
T  6279937 atcaaaccaagccttgaaccctaattttatataaatttactttctaatctaaattcaccgtttt 6280000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 40; E-Value: 0.00000000000006
Query Start/End: Original strand, 3 - 66
Target Start/End: Original strand, 24887170 - 24887233
Alignment:
Q  3 taatgacctaatccctatcaaaccaagcctcgaaccctaattttatgtaaatttattttctaat 66  Q
    ||||||| |||| ||||||||||||||||| |||||||||| |||||| ||| |||||||||||    
T  24887170 taatgacttaattcctatcaaaccaagcctagaaccctaatcttatgtgaatctattttctaat 24887233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 38; E-Value: 0.0000000000009
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 1990408 - 1990311
Alignment:
Q  1 tctaatgacctaatccctatcaaaccaagcctcgaaccctaattttatgtaaatttattttctaatct-atttcaccgtttttctaatgaaataacaa 97  Q
    ||||||||| ||||||  |||||||||| ||   |||| ||||||||| ||||| || |||||||||| |||||||||||||| ||||||| ||||||    
T  1990408 tctaatgacgtaatcctaatcaaaccaaaccataaaccttaattttatataaatatactttctaatctaatttcaccgtttttataatgaattaacaa 1990311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 38; E-Value: 0.0000000000009
Query Start/End: Original strand, 64 - 157
Target Start/End: Original strand, 18008357 - 18008449
Alignment:
Q  64 aatctatttcaccgtttttctaatgaaataacaagtattaatcgaaggaccgaaaggtgaagtttaatagttgttatttcatcatcacaaatat 157  Q
    |||||||||||||||| || |||| || || |||  ||||||||| ||| |||||| |||||||||||||||||||||   |||||||||||||    
T  18008357 aatctatttcaccgttcttataatcaa-taccaaacattaatcgatggatcgaaagatgaagtttaatagttgttattgattcatcacaaatat 18008449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 38; E-Value: 0.0000000000009
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 21139837 - 21139934
Alignment:
Q  1 tctaatgacctaatccctatcaaaccaagcctcgaaccctaattttatgtaaatttattttctaatct-atttcaccgtttttctaatgaaataacaa 97  Q
    ||||||||| ||||||  ||||||| || ||   |||||||||||||| ||||| || |||||||||| |||||||||||||| ||||||| ||||||    
T  21139837 tctaatgacgtaatcctaatcaaactaaaccataaaccctaattttatataaatctactttctaatctaatttcaccgtttttataatgaattaacaa 21139934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 36; E-Value: 0.00000000001
Query Start/End: Original strand, 19 - 97
Target Start/End: Complemental strand, 23193840 - 23193761
Alignment:
Q  19 atcaaaccaagcctcgaaccctaattttatgtaaatttattttctaatct-atttcaccgtttttctaatgaaataacaa 97  Q
    |||||| ||||||| ||||| ||||||||| ||||| || |||||||||| ||||||||||| || ||||||| ||||||    
T  23193840 atcaaatcaagccttgaaccttaattttatataaatctactttctaatctaatttcaccgttgttataatgaattaacaa 23193761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 19 - 97
Target Start/End: Complemental strand, 23221411 - 23221332
Alignment:
Q  19 atcaaaccaagcctcgaaccctaattttatgtaaatttattttctaatct-atttcaccgtttttctaatgaaataacaa 97  Q
    |||||||||||||| |||||||| |||||| | ||| || |||||||||| ||||||||| | || ||||||| ||||||    
T  23221411 atcaaaccaagccttgaaccctagttttatatgaatctaatttctaatctaatttcaccgatgttataatgaattaacaa 23221332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 24967424 - 24967514
Alignment:
Q  1 tctaatgacctaatccctatcaaaccaagcctcgaaccctaattttatgtaaatttattttctaatct-atttcaccgtttttctaatgaa 90  Q
    |||||||||  |||||  |||||||||| ||   ||||||| |||||| ||||| || |||||||||| |||||||||||||| |||||||    
T  24967424 tctaatgacgcaatcctaatcaaaccaaaccataaaccctagttttatataaatctactttctaatctaatttcaccgtttttataatgaa 24967514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 15759729 - 15759797
Alignment:
Q  1 tctaatgacctaatccctatcaaaccaagcctcgaaccctaattttatgtaaatttattttctaatcta 69  Q
    ||||||||| ||||||  |||||||||||| |  ||||||||||||||||||   || |||||||||||    
T  15759729 tctaatgacataatcctaatcaaaccaagctttaaaccctaattttatgtaaccctaatttctaatcta 15759797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 22285145 - 22285213
Alignment:
Q  1 tctaatgacctaatccctatcaaaccaagcctcgaaccctaattttatgtaaatttattttctaatcta 69  Q
    ||||||||| ||||||  |||||||||||| |  ||||||||||||||||||   || |||||||||||    
T  22285145 tctaatgacataatcctaatcaaaccaagctttaaaccctaattttatgtaaccctaatttctaatcta 22285213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 31469582 - 31469534
Alignment:
Q  1 tctaatgacctaatccctatcaaaccaagcctcgaaccctaattttatg 49  Q
    ||||||||||||||||   ||||||||||||| ||||| ||||||||||    
T  31469582 tctaatgacctaatcctattcaaaccaagcctagaaccataattttatg 31469534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 129; Significance: 4e-67; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 129; E-Value: 4e-67
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 168363 - 168523
Alignment:
Q  1 tctaatgacctaatccctatcaaaccaagcctcgaaccctaattttatgtaaatttattttctaatctatttcaccgtttttctaatgaaataacaagta 100  Q
    ||||||||||||||| |||||||||||| ||| |||||||||| |||||||||| ||| |||||||||||||||||||||||||||||||||||||||||    
T  168363 tctaatgacctaatctctatcaaaccaaacctagaaccctaatcttatgtaaatctatattctaatctatttcaccgtttttctaatgaaataacaagta 168462  T
Q  101 ttaatcgaaggaccgaaaggtgaagtttaatagttgttatttcatcatcacaaatatcaag 161  Q
    |||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||    
T  168463 ttaatcgaaggaccgaaatgtgaagtttaatagttgttgtttcatcatcacaaatatcaag 168523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 129; Significance: 4e-67; HSPs: 19)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 129; E-Value: 4e-67
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 23029486 - 23029326
Alignment:
Q  1 tctaatgacctaatccctatcaaaccaagcctcgaaccctaattttatgtaaatttattttctaatctatttcaccgtttttctaatgaaataacaagta 100  Q
    |||||||||||||||||||| ||||||||||| |||||||||| |||||||||| |||||||||||||||||||  ||||||||||||||||||||||||    
T  23029486 tctaatgacctaatccctattaaaccaagcctagaaccctaatcttatgtaaatctattttctaatctatttcattgtttttctaatgaaataacaagta 23029387  T
Q  101 ttaatcgaaggaccgaaaggtgaagtttaatagttgttatttcatcatcacaaatatcaag 161  Q
    ||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||    
T  23029386 ttaatcgaaggaccgaaagatgaagtctaatagttgttatttcatcatcacaaatatcaag 23029326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 126; E-Value: 3e-65
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 23114427 - 23114588
Alignment:
Q  1 tctaatgacctaatccctatcaaaccaagcctcgaaccctaattttatgtaaatttattttctaatcta-tttcaccgtttttctaatgaaataacaagt 99  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||| ||||| ||||||||||||  ||||||||||    
T  23114427 tctaatgacctaatccctatcaaaccaagcctagaaccctaattttatgtaaatatattttctaatctaatttcatcgtttttctaattgaataacaagt 23114526  T
Q  100 attaatcgaaggaccgaaaggtgaagtttaatagttgttatttcatcatcacaaatatcaag 161  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||    
T  23114527 attaatcgaaggatcgaaaggtgaagtttaatagttgttatttcatcatctcaaatatcaag 23114588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 126; E-Value: 3e-65
Query Start/End: Original strand, 4 - 161
Target Start/End: Original strand, 24166435 - 24166592
Alignment:
Q  4 aatgacctaatccctatcaaaccaagcctcgaaccctaattttatgtaaatttattttctaatctatttcaccgtttttctaatgaaataacaagtatta 103  Q
    ||||||||||||||||||||||||||||| |||||||||| |||||||||| ||||||||||| || ||||||| |||||||||| ||||||||||||||    
T  24166435 aatgacctaatccctatcaaaccaagcctggaaccctaatcttatgtaaatctattttctaatttaattcaccgcttttctaatggaataacaagtatta 24166534  T
Q  104 atcgaaggaccgaaaggtgaagtttaatagttgttatttcatcatcacaaatatcaag 161  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24166535 atcgaatgaccgaaaggtgaagtttaatagttgttatttcatcatcacaaatatcaag 24166592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 70; E-Value: 7e-32
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 12410694 - 12410795
Alignment:
Q  1 tctaatgacctaatccctatcaaaccaagcctcgaaccctaattttatgtaaatttattttctaatct-atttcaccgtttttctaatgaaataacaagt 99  Q
    ||||||||||||||||  |||||||||||||||||||||||||||||||||||| || |||||||||| |||||||||||||| ||||||| ||||||||    
T  12410694 tctaatgacctaatcctaatcaaaccaagcctcgaaccctaattttatgtaaatctactttctaatctaatttcaccgtttttataatgaattaacaagt 12410793  T
Q  100 at 101  Q
    ||    
T  12410794 at 12410795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 70; E-Value: 7e-32
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 22170954 - 22171055
Alignment:
Q  1 tctaatgacctaatccctatcaaaccaagcctcgaaccctaattttatgtaaatttattttctaatct-atttcaccgtttttctaatgaaataacaagt 99  Q
    ||||||||  |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| | |||||||||||| ||||||| ||||||||    
T  22170954 tctaatgaattaatccctatcaaaccaagcctcgaaccctaattttatgtaaatctattttctaatctaaattcaccgtttttataatgaattaacaagt 22171053  T
Q  100 at 101  Q
    ||    
T  22171054 at 22171055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 69; E-Value: 3e-31
Query Start/End: Original strand, 1 - 157
Target Start/End: Complemental strand, 17408650 - 17408495
Alignment:
Q  1 tctaatgacctaatccctatcaaaccaagcctcgaaccctaattttatgtaaatttattttctaatctatttcaccgtttttctaatgaaataacaagta 100  Q
    ||||||||| ||||||  |||||||| ||| |  ||||||||||||||||||  ||| |||||||| ||||||||| || || |||| || |||||||||    
T  17408650 tctaatgacataatcctaatcaaacccagctttaaaccctaattttatgtaaccttaatttctaatttatttcaccattcttataatcaa-taacaagta 17408552  T
Q  101 ttaatcgaaggaccgaaaggtgaagtttaatagttgttatttcatcatcacaaatat 157  Q
    |||||||||||| |||||| |||||||||||||||||||||   |||||||||||||    
T  17408551 ttaatcgaaggatcgaaagatgaagtttaatagttgttattgattcatcacaaatat 17408495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 65; E-Value: 7e-29
Query Start/End: Original strand, 1 - 157
Target Start/End: Original strand, 22948740 - 22948895
Alignment:
Q  1 tctaatgacctaatccctatcaaaccaagcctcgaaccctaattttatgtaaatttattttctaatctatttcaccgtttttctaatgaaataacaagta 100  Q
    ||||||||| ||||||   ||||||||||| |  ||||| ||||||||||||   || ||||||||||||||||||||| || |||| || |||||||||    
T  22948740 tctaatgacataatcctattcaaaccaagctttaaacccaaattttatgtaaccctaatttctaatctatttcaccgttcttataatcaa-taacaagta 22948838  T
Q  101 ttaatcgaaggaccgaaaggtgaagtttaatagttgttatttcatcatcacaaatat 157  Q
    |||||||||| | |||||| |||||||||||||||||||||   |||||||||||||    
T  22948839 ttaatcgaagcatcgaaagatgaagtttaatagttgttattcattcatcacaaatat 22948895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 64; E-Value: 3e-28
Query Start/End: Original strand, 1 - 160
Target Start/End: Original strand, 19222082 - 19222241
Alignment:
Q  1 tctaatgacctaatccctatcaaaccaagcctcgaaccctaattttatgtaaatttattttctaatctatttcaccgtttttctaatgaaataacaagta 100  Q
    ||||||||| |||| |||||| ||| |||||| |||||| ||| |||| ||||| |||||||||||||| |||     ||||| ||     |||||||||    
T  19222082 tctaatgacttaattcctatctaacaaagcctagaacccgaatcttatttaaatctattttctaatctaattccattgttttcaaactcggtaacaagta 19222181  T
Q  101 ttaatcgaaggaccgaaaggtgaagtttaatagttgttatttcatcatcacaaatatcaa 160  Q
    |||| |||||||||||||| ||||||||||||||||||||||||||||| ||||||||||    
T  19222182 ttaaacgaaggaccgaaagatgaagtttaatagttgttatttcatcatctcaaatatcaa 19222241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 157
Target Start/End: Complemental strand, 20724766 - 20724611
Alignment:
Q  1 tctaatgacctaatccctatcaaaccaagcctcgaaccctaattttatgtaaatttattttctaatctatttcaccgtttttctaatgaaataacaagta 100  Q
    ||||||||| | ||||  |||||||||||  |  ||||||||||||||||||   || |||||||||||||||||| || || |||| || |||||||||    
T  20724766 tctaatgacattatcctaatcaaaccaagttttaaaccctaattttatgtaaccctactttctaatctatttcaccattcttataatcaa-taacaagta 20724668  T
Q  101 ttaatcgaaggaccgaaaggtgaagtttaatagttgttatttcatcatcacaaatat 157  Q
    ||||||||| || |||||| |||||||||||||||||||||   |||||||||||||    
T  20724667 ttaatcgaatgatcgaaagatgaagtttaatagttgttattgattcatcacaaatat 20724611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 20738523 - 20738620
Alignment:
Q  1 tctaatgacctaatccctatcaaaccaagcctcgaaccctaattttatgtaaatttattttctaatct-atttcaccgtttttctaatgaaataacaa 97  Q
    ||||||||||||||||  |||||||||||||||||||||||||||||  ||||| || |||||||||| |||||||||||||| ||||||| ||||||    
T  20738523 tctaatgacctaatcctaatcaaaccaagcctcgaaccctaattttacataaatctactttctaatctaatttcaccgtttttataatgaattaacaa 20738620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 165
Target Start/End: Original strand, 22942530 - 22942693
Alignment:
Q  1 tctaatgacctaatccctatcaaaccaagcctcgaaccctaattttatgtaaatttattttctaatctatttcaccgtttttctaatgaaataacaagta 100  Q
    ||||||||| ||||||   ||||||||| | |  ||||||||||||||| ||   || ||||||||||||||||  ||| || ||||   ||||||||||    
T  22942530 tctaatgacataatcctagtcaaaccaaactttaaaccctaattttatgcaaccctaatttctaatctatttcagtgttcttataat-ttataacaagta 22942628  T
Q  101 ttaatcgaaggaccgaaaggtgaagtttaatagttgttatttcatcatcacaaatatcaagtgaa 165  Q
    |||||||||||| |||||| |||||||||||||||||||||   |||||| |||||| |||||||    
T  22942629 ttaatcgaaggatcgaaagatgaagtttaatagttgttattgattcatcaaaaatattaagtgaa 22942693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 50; E-Value: 6e-20
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 2953453 - 2953356
Alignment:
Q  1 tctaatgacctaatccctatcaaaccaagcctcgaaccctaattttatgtaaatttattttctaatct-atttcaccgtttttctaatgaaataacaa 97  Q
    ||||||||| ||||||  |||||||||||||| ||||||||||||||| ||||| || |||||||||| |||||||| ||||| ||||||| ||||||    
T  2953453 tctaatgacataatcctaatcaaaccaagccttgaaccctaattttatataaatctactttctaatctaatttcaccatttttataatgaattaacaa 2953356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 50; E-Value: 6e-20
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 18091834 - 18091769
Alignment:
Q  1 tctaatgacctaatccctatcaaaccaagcctcgaaccctaattttatgtaaatttattttctaat 66  Q
    |||||||||||||| ||| ||||||||||||| ||| |||||||||||||||||||||||||||||    
T  18091834 tctaatgacctaattcctctcaaaccaagcctagaatcctaattttatgtaaatttattttctaat 18091769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 49; E-Value: 2e-19
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 16677246 - 16677346
Alignment:
Q  1 tctaatgacctaatccctatcaaaccaagcctcgaaccctaattttatgtaaatttattttctaatct-atttcaccgtttttctaatgaaataacaagt 99  Q
    ||||||||  |||||||||||||||||||| ||  ||||||||||||||||||| ||||||||||| | | |||||| ||||| ||||||| ||||||||    
T  16677246 tctaatgatataatccctatcaaaccaagcatcttaccctaattttatgtaaatctattttctaatataacttcaccatttttataatgaattaacaagt 16677345  T
Q  100 a 100  Q
    |    
T  16677346 a 16677346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 44; E-Value: 2e-16
Query Start/End: Original strand, 19 - 97
Target Start/End: Complemental strand, 20103828 - 20103749
Alignment:
Q  19 atcaaaccaagcctcgaaccctaattttatgtaaatttattttctaatct-atttcaccgtttttctaatgaaataacaa 97  Q
    |||||||||||| | ||||||||||||||| |||||||| |||||||||| ||||||||||| || ||||||| ||||||    
T  20103828 atcaaaccaagcattgaaccctaattttatataaatttactttctaatctaatttcaccgttattataatgaattaacaa 20103749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 38; E-Value: 0.0000000000009
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 31758035 - 31757954
Alignment:
Q  1 tctaatgacctaatccctatcaaaccaagcctcgaaccctaattttatgtaaatttattttctaatct-atttcaccgtttt 81  Q
    ||||||||| ||||||  |||||||||||||   |||||||||||||| ||||| || |||||||||| |||||||||||||    
T  31758035 tctaatgacataatcctaatcaaaccaagccataaaccctaattttatataaatctactttctaatctaatttcaccgtttt 31757954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.00000000006
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 24165422 - 24165512
Alignment:
Q  1 tctaatgacctaatccctatcaaaccaagcctcgaaccctaattttatgtaaatttattttctaatct-atttcaccgtttttctaatgaa 90  Q
    ||||||||| ||||||  |||||||||| ||   ||||||| |||||| ||||| || |||||||||| |||||||||||||| |||||||    
T  24165422 tctaatgacgtaatcctaatcaaaccaaaccataaaccctagttttatataaatctactttctaatctaatttcaccgtttttataatgaa 24165512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 20169392 - 20169311
Alignment:
Q  1 tctaatgacctaatccctatcaaaccaagcctcgaaccctaattttatgtaaatttattttctaatct-atttcaccgtttt 81  Q
    ||||||||| ||||||  ||||||||||||||  ||||||||||||||||||   || |||||||||| | |||||||||||    
T  20169392 tctaatgacataatcctaatcaaaccaagccttaaaccctaattttatgtaaccctaatttctaatctaaattcaccgtttt 20169311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.0000000009
Query Start/End: Original strand, 92 - 160
Target Start/End: Complemental strand, 42687503 - 42687435
Alignment:
Q  92 taacaagtattaatcgaaggaccgaaaggtgaagtttaatagttgttatttcatcatcacaaatatcaa 160  Q
    ||||| ||||||| ||||  ||| || || |||||||||||||||||| ||||||||| ||||||||||    
T  42687503 taacacgtattaaacgaaataccaaacggagaagtttaatagttgttacttcatcatctcaaatatcaa 42687435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 129; Significance: 4e-67; HSPs: 27)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 129; E-Value: 4e-67
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 24371358 - 24371198
Alignment:
Q  1 tctaatgacctaatccctatcaaaccaagcctcgaaccctaattttatgtaaatttattttctaatctatttcaccgtttttctaatgaaataacaagta 100  Q
    ||||||||| |||||||||||||||||||||| ||||| |||| |||||||||| ||||||||||| |||||||| |||||||||||| |||||||||||    
T  24371358 tctaatgacgtaatccctatcaaaccaagcctagaaccttaatcttatgtaaatctattttctaatatatttcactgtttttctaatggaataacaagta 24371259  T
Q  101 ttaatcgaaggaccgaaaggtgaagtttaatagttgttatttcatcatcacaaatatcaag 161  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24371258 ttaatcgaaggaccgaaaggtgaagtttaatagttgttatttcatcatcacaaatatcaag 24371198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 125; E-Value: 1e-64
Query Start/End: Original strand, 1 - 165
Target Start/End: Original strand, 20852296 - 20852460
Alignment:
Q  1 tctaatgacctaatccctatcaaaccaagcctcgaaccctaattttatgtaaatttattttctaatctatttcaccgtttttctaatgaaataacaagta 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||| ||||||| |||||||||    
T  20852296 tctaatgacctaatccctatcaaaccaagcctcgaaccctaattttatgtaaatctattttcaaatctatttcaccgtttttataatgaattaacaagta 20852395  T
Q  101 ttaatcgaaggaccgaaaggtgaagtttaatagttgttatttcatcatcacaaatatcaagtgaa 165  Q
    |||||||| |||| |||||  |||||||||||||||||| ||||| |||||||||||||||||||    
T  20852396 ttaatcgatggactgaaagacgaagtttaatagttgttaattcataatcacaaatatcaagtgaa 20852460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 105; E-Value: 9e-53
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 24321966 - 24322126
Alignment:
Q  1 tctaatgacctaatccctatcaaaccaagcctcgaaccctaattttatgtaaatttattttctaatctatttcaccgtttttctaatgaaataacaagta 100  Q
    |||||||||||||||| ||||||||||||||| |||||| || ||||||||||| ||||||||||| |||||| || ||||| ||||||| |||||||||    
T  24321966 tctaatgacctaatccatatcaaaccaagccttgaacccgaactttatgtaaatctattttctaatttatttcgccatttttataatgaattaacaagta 24322065  T
Q  101 ttaatcgaaggaccgaaaggtgaagtttaatagttgttatttcatcatcacaaatatcaag 161  Q
    |||||||| |||| ||||||||||||||||||||||||| ||||| |||||||||||||||    
T  24322066 ttaatcgatggactgaaaggtgaagtttaatagttgttaattcataatcacaaatatcaag 24322126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 97; E-Value: 6e-48
Query Start/End: Original strand, 1 - 165
Target Start/End: Complemental strand, 23256935 - 23256773
Alignment:
Q  1 tctaatgacctaatccctatcaaaccaagcctcgaaccctaattttatgtaaatttattttctaatctatttcaccgtttttctaatgaaataacaagta 100  Q
    |||||||||||||||| |||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||| || ||||  |||||||| ||    
T  23256935 tctaatgacctaatcc-tatcaacccaagcctcgaaccctaattttatgtaaatctattttctaatctatttcaccgttcttataat-caataacaaata 23256838  T
Q  101 ttaatcgaaggaccgaaaggtgaagtttaatagttgttatttcatcatcacaaatatcaagtgaa 165  Q
    |||||||| ||| |||||| |||||||||||| ||||||||   |||||||||||||||||||||    
T  23256837 ttaatcgatggatcgaaagatgaagtttaatatttgttattgattcatcacaaatatcaagtgaa 23256773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 80; E-Value: 8e-38
Query Start/End: Original strand, 4 - 139
Target Start/End: Complemental strand, 24609984 - 24609850
Alignment:
Q  4 aatgacctaatccctatcaaaccaagcctcgaaccctaattttatgtaaatttattttctaatctatttcaccgtttttctaatgaaataacaagtatta 103  Q
    |||||||||||||  |||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||| || ||||  |||||||| |||||    
T  24609984 aatgacctaatcctaatcaaaccaagccttgaaccctaattttatgtaaatctattttctaatctatttcaccgttcttataat-caataacaaatatta 24609886  T
Q  104 atcgaaggaccgaaaggtgaagtttaatagttgtta 139  Q
    ||||| ||| | |||| |||||||||||||||||||    
T  24609885 atcgatggatcaaaagatgaagtttaatagttgtta 24609850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 74; E-Value: 3e-34
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 19012931 - 19012830
Alignment:
Q  1 tctaatgacctaatccctatcaaaccaagcctcgaaccctaattttatgtaaatttattttctaatct-atttcaccgtttttctaatgaaataacaagt 99  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||| ||||||| ||||||| ||||||||    
T  19012931 tctaatgacctaattcctatcaaaccaagcctcgaaccctaattttatgtaaatctattttctaatctaatttcatcgtttttataatgaattaacaagt 19012832  T
Q  100 at 101  Q
    ||    
T  19012831 at 19012830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 70; E-Value: 7e-32
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 19124248 - 19124147
Alignment:
Q  1 tctaatgacctaatccctatcaaaccaagcctcgaaccctaattttatgtaaatttattttctaatct-atttcaccgtttttctaatgaaataacaagt 99  Q
    ||||||||||||||||  ||||||||||| |||||||||||||||||||||||||||||||||||||| ||| |||||||||| ||||||| ||||||||    
T  19124248 tctaatgacctaatcctaatcaaaccaagtctcgaaccctaattttatgtaaatttattttctaatctaattccaccgtttttataatgaattaacaagt 19124149  T
Q  100 at 101  Q
    ||    
T  19124148 at 19124147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 65; E-Value: 7e-29
Query Start/End: Original strand, 1 - 157
Target Start/End: Complemental strand, 29577265 - 29577110
Alignment:
Q  1 tctaatgacctaatccctatcaaaccaagcctcgaaccctaattttatgtaaatttattttctaatctatttcaccgtttttctaatgaaataacaagta 100  Q
    ||||||||| ||||||  |||||||||||| |  | ||||||||||||||||  ||  ||||||||||||||||||||| || |||| || |||||||||    
T  29577265 tctaatgacataatcctaatcaaaccaagctttaatccctaattttatgtaaccttgatttctaatctatttcaccgttcttataatcaa-taacaagta 29577167  T
Q  101 ttaatcgaaggaccgaaaggtgaagtttaatagttgttatttcatcatcacaaatat 157  Q
    ||||||||||||  ||||| |||||||||||||||||||||   | |||||||||||    
T  29577166 ttaatcgaaggattgaaagatgaagtttaatagttgttattgatttatcacaaatat 29577110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 160
Target Start/End: Complemental strand, 25593040 - 25592881
Alignment:
Q  1 tctaatgacctaatccctatcaaaccaagcctcgaaccctaattttatgtaaatttattttctaatcta-tttcaccgtttttctaatgaaataacaagt 99  Q
    ||||||||| |||| |||||||||||||||||  ||||  ||| |||| ||||| |||||||||||||| |||||  ||||| | ||   | ||||| ||    
T  25593040 tctaatgacttaattcctatcaaaccaagcctaaaaccgcaatcttatttaaatctattttctaatctaatttcattgtttt-caaactcagtaacatgt 25592942  T
Q  100 attaatcgaaggaccgaaaggtgaagtttaatagttgttatttcatcatcacaaatatcaa 160  Q
     |||| |||||||||||||||||||||||||||||||||||||||||||| | ||||||||    
T  25592941 gttaaacgaaggaccgaaaggtgaagtttaatagttgttatttcatcatctccaatatcaa 25592881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 90 - 160
Target Start/End: Complemental strand, 21511766 - 21511696
Alignment:
Q  90 aataacaagtattaatcgaaggaccgaaaggtgaagtttaatagttgttatttcatcatcacaaatatcaa 160  Q
    |||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  21511766 aataacaagtgttaaacgaaggaccgaaaggtgaagtttaatagttgttatttcatcatctcaaatatcaa 21511696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 57; E-Value: 4e-24
Query Start/End: Original strand, 1 - 157
Target Start/End: Original strand, 23704448 - 23704603
Alignment:
Q  1 tctaatgacctaatccctatcaaaccaagcctcgaaccctaattttatgtaaatttattttctaatctatttcaccgtttttctaatgaaataacaagta 100  Q
    ||||||||| |||| |  ||||||||||||    ||||||||||||||||||   || |||||||| |||||||| ||| || |||| || |||||| ||    
T  23704448 tctaatgacataatactaatcaaaccaagctctaaaccctaattttatgtaaccctaatttctaatttatttcactgttcttataatcaa-taacaaata 23704546  T
Q  101 ttaatcgaaggaccgaaaggtgaagtttaatagttgttatttcatcatcacaaatat 157  Q
    |||||||||||| |||||| |||||||||||||||||||||   |||||||||||||    
T  23704547 ttaatcgaaggatcgaaagatgaagtttaatagttgttattgattcatcacaaatat 23704603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 55; E-Value: 6e-23
Query Start/End: Original strand, 59 - 157
Target Start/End: Complemental strand, 24177554 - 24177457
Alignment:
Q  59 tttctaatctatttcaccgtttttctaatgaaataacaagtattaatcgaaggaccgaaaggtgaagtttaatagttgttatttcatcatcacaaatat 157  Q
    ||||||||||||||||||||| || |||| || ||||||||||||||| ||||| |||||| |||||||||||||||||||||   |||||||||||||    
T  24177554 tttctaatctatttcaccgttcttataatcaa-taacaagtattaatcaaaggatcgaaagatgaagtttaatagttgttattgattcatcacaaatat 24177457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 13004656 - 13004721
Alignment:
Q  1 tctaatgacctaatccctatcaaaccaagcctcgaaccctaattttatgtaaatttattttctaat 66  Q
    |||||||||||||| ||||||||||||||||| ||||||||||||||||||||| |||||||||||    
T  13004656 tctaatgacctaattcctatcaaaccaagcctagaaccctaattttatgtaaatctattttctaat 13004721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 92 - 160
Target Start/End: Complemental strand, 21516243 - 21516175
Alignment:
Q  92 taacaagtattaatcgaaggaccgaaaggtgaagtttaatagttgttatttcatcatcacaaatatcaa 160  Q
    |||||||| |||| ||||| |||||||||||||||||||||||||||||||||||||| ||||||||||    
T  21516243 taacaagtgttaaacgaagaaccgaaaggtgaagtttaatagttgttatttcatcatctcaaatatcaa 21516175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 49; E-Value: 2e-19
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 31590432 - 31590365
Alignment:
Q  1 tctaatgacctaatccctatcaaaccaagcctcgaaccctaattttatgtaaatttattttctaatcta 69  Q
    |||||||||||||||| ||||||||||||||| |||||||||||||||||| || ||||||||||||||    
T  31590432 tctaatgacctaatcc-tatcaaaccaagcctagaaccctaattttatgtagatctattttctaatcta 31590365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 49; E-Value: 2e-19
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 36130018 - 36129950
Alignment:
Q  1 tctaatgacctaatccctatcaaaccaagcctcgaaccctaattttatgtaaatttattttctaatcta 69  Q
    |||||||||||||| ||||||||||||||||   |||||||||||||||||||| ||||||||||||||    
T  36130018 tctaatgacctaattcctatcaaaccaagccaaaaaccctaattttatgtaaatatattttctaatcta 36129950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 15584006 - 15584107
Alignment:
Q  1 tctaatgacctaatccctatcaaaccaagcctcgaaccctaattttatgtaaatttattttctaatct-atttcaccgtttttctaatgaaataacaagt 99  Q
    ||||||||| ||||||  |||||||||||||| ||||||||||||||| ||||| || |||||||||| ||||||| ||| || ||||||| | ||||||    
T  15584006 tctaatgacataatcctaatcaaaccaagccttgaaccctaattttatataaatctactttctaatctaatttcacagttgttataatgaatttacaagt 15584105  T
Q  100 at 101  Q
    ||    
T  15584106 at 15584107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 44; E-Value: 2e-16
Query Start/End: Original strand, 19 - 141
Target Start/End: Complemental strand, 21311 - 21185
Alignment:
Q  19 atcaaaccaagcctcgaaccctaattttatgtaaatttattttctaatctatttcaccgtttttctaatgaaataacaagt-----attaatcgaaggac 113  Q
    ||||||||||||||  ||||||||||||||||||  ||| ||||||||||||||||||||| || ||||  | |||||| |     ||||||||| |||     
T  21311 atcaaaccaagccttaaaccctaattttatgtaaccttaatttctaatctatttcaccgttcttataat-cagtaacaaatattaaattaatcgatggat 21213  T
Q  114 cgaaaggtgaagtttaatagttgttatt 141  Q
    |||||| ||||||||| |||||||||||    
T  21212 cgaaagatgaagtttattagttgttatt 21185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 44; E-Value: 2e-16
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 21344401 - 21344299
Alignment:
Q  1 tctaatgacctaatccctatcaaaccaagcctcgaaccctaattttatgtaaatttattttctaatctatttcaccgtttttctaatgaaataacaagta 100  Q
    ||||||||| ||||||  ||||||||||||||  ||||||||||||| ||||   || |||||||||||||||||||||||| ||||  |||||||| ||    
T  21344401 tctaatgacgtaatcctaatcaaaccaagccttaaaccctaattttaggtaaccctaatttctaatctatttcaccgtttttataat-caataacaaata 21344303  T
Q  101 ttaa 104  Q
    ||||    
T  21344302 ttaa 21344299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 40; E-Value: 0.00000000000006
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 29951794 - 29951866
Alignment:
Q  1 tctaatgacctaatccctatcaaaccaagcctcgaaccctaattttat----gtaaatttattttctaatcta 69  Q
    ||||||||||||||||||||||||||||||   |||||||||||||||    |||||| ||||||||||||||    
T  29951794 tctaatgacctaatccctatcaaaccaagctaagaaccctaattttatttaagtaaatctattttctaatcta 29951866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 22578243 - 22578184
Alignment:
Q  1 tctaatgacctaatccctatcaaaccaagcctcgaaccctaattttatgtaaatttatttt 61  Q
    |||||||||||||||| |||||||||||||||  |||||||||||||||| ||||| ||||    
T  22578243 tctaatgacctaatcc-tatcaaaccaagcctaaaaccctaattttatgtgaatttttttt 22578184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 23340735 - 23340816
Alignment:
Q  1 tctaatgacctaatccctatcaaaccaagcctcgaaccctaattttatgtaaatttattttctaatct-atttcaccgtttt 81  Q
    ||||||||| ||||||  ||||||||||||||  ||||||||||||||||||   || |||||||||| | |||||||||||    
T  23340735 tctaatgacataatcctaatcaaaccaagccttaaaccctaattttatgtaaccctaatttctaatctaaattcaccgtttt 23340816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 23698727 - 23698630
Alignment:
Q  1 tctaatgacctaatccctatcaaaccaagcctcgaaccctaattttatgtaaatttattttctaatct-atttcaccgtttttctaatgaaataacaa 97  Q
    ||||||||| ||||||  |||||||||| |    |||||||||||||| ||||| ||||||||||||| ||||||  |||||| ||||||| ||||||    
T  23698727 tctaatgacgtaatcctaatcaaaccaaactataaaccctaattttatataaatctattttctaatctaatttcattgtttttataatgaattaacaa 23698630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 24366223 - 24366126
Alignment:
Q  1 tctaatgacctaatccctatcaaaccaagcctcgaaccctaattttatgtaaatttattttctaatcta-tttcaccgtttttctaatgaaataacaa 97  Q
    ||||||||| ||||||  |||||||||| ||   |||| ||||||||| ||||| || |||||||| || ||||||||||||| ||||||| ||||||    
T  24366223 tctaatgacgtaatcctaatcaaaccaaaccataaaccttaattttatataaatctactttctaatataatttcaccgtttttataatgaattaacaa 24366126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 19 - 69
Target Start/End: Original strand, 539384 - 539434
Alignment:
Q  19 atcaaaccaagcctcgaaccctaattttatgtaaatttattttctaatcta 69  Q
    ||||||||||| || ||||||||||||||| ||||| || |||||||||||    
T  539384 atcaaaccaagtcttgaaccctaattttatataaatctactttctaatcta 539434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 41653531 - 41653441
Alignment:
Q  1 tctaatgacctaatccctatcaaaccaagcctcgaaccctaattttatgtaaatttattttctaatct-atttcaccgtttttctaatgaa 90  Q
    ||||||||  ||||||  |||||||||| ||   |||||||||||||| ||||| || ||| |||||| |||||||||||||| |||||||    
T  41653531 tctaatgatgtaatcctaatcaaaccaaaccataaaccctaattttatataaatctactttgtaatctaatttcaccgtttttataatgaa 41653441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 25858507 - 25858410
Alignment:
Q  1 tctaatgacctaatccctatcaaaccaagcctcgaaccctaattttatgtaaatttattttctaatct-atttcaccgtttttctaatgaaataacaa 97  Q
    ||||||||| ||||||  |||||| ||| ||   ||||||||| |||| ||||| || |||||||||| |||||||||||||| |||| || ||||||    
T  25858507 tctaatgacgtaatcctaatcaaatcaaaccataaaccctaatattatataaatctactttctaatctaatttcaccgtttttataataaattaacaa 25858410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 125; Significance: 1e-64; HSPs: 33)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 125; E-Value: 1e-64
Query Start/End: Original strand, 1 - 165
Target Start/End: Complemental strand, 9717680 - 9717516
Alignment:
Q  1 tctaatgacctaatccctatcaaaccaagcctcgaaccctaattttatgtaaatttattttctaatctatttcaccgtttttctaatgaaataacaagta 100  Q
    |||||||| ||||||||||||||||||||||||| || ||||| ||||||||||  ||||||||||||| |||||||||||||| ||| |||||||||||    
T  9717680 tctaatgatctaatccctatcaaaccaagcctcggactctaatcttatgtaaatcaattttctaatctaattcaccgtttttctgatggaataacaagta 9717581  T
Q  101 ttaatcgaaggaccgaaaggtgaagtttaatagttgttatttcatcatcacaaatatcaagtgaa 165  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9717580 ttaatcgaaggaacgaaaggtgaagtttaatagttgttatttcatcatcacaaatatcaagtgaa 9717516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 121; E-Value: 3e-62
Query Start/End: Original strand, 21 - 161
Target Start/End: Original strand, 17168977 - 17169117
Alignment:
Q  21 caaaccaagcctcgaaccctaattttatgtaaatttattttctaatctatttcaccgtttttctaatgaaataacaagtattaatcgaaggaccgaaagg 120  Q
    |||||||||||| |||||||||| |||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  17168977 caaaccaagcctagaaccctaatcttatgtaaatctattttctaatctatttcaccgtttttataatgaaataacaagtattaatcgaaggaccgaaagg 17169076  T
Q  121 tgaagtttaatagttgttatttcatcatcacaaatatcaag 161  Q
    ||||| |||||||||||||||||||||||||||||||||||    
T  17169077 tgaagcttaatagttgttatttcatcatcacaaatatcaag 17169117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 121; E-Value: 3e-62
Query Start/End: Original strand, 21 - 161
Target Start/End: Original strand, 17174537 - 17174677
Alignment:
Q  21 caaaccaagcctcgaaccctaattttatgtaaatttattttctaatctatttcaccgtttttctaatgaaataacaagtattaatcgaaggaccgaaagg 120  Q
    |||||||||||| |||||||||| |||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  17174537 caaaccaagcctagaaccctaatcttatgtaaatctattttctaatctatttcaccgtttttataatgaaataacaagtattaatcgaaggaccgaaagg 17174636  T
Q  121 tgaagtttaatagttgttatttcatcatcacaaatatcaag 161  Q
    ||||| |||||||||||||||||||||||||||||||||||    
T  17174637 tgaagcttaatagttgttatttcatcatcacaaatatcaag 17174677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 96; E-Value: 2e-47
Query Start/End: Original strand, 1 - 132
Target Start/End: Complemental strand, 23793529 - 23793398
Alignment:
Q  1 tctaatgacctaatccctatcaaaccaagcctcgaaccctaattttatgtaaatttattttctaatctatttcaccgtttttctaatgaaataacaagta 100  Q
    ||||||||||||||||||||||| ||||||||||||||||||| |||||||||| |||||||||||||| |||||||||||||||||  |||||||||||    
T  23793529 tctaatgacctaatccctatcaatccaagcctcgaaccctaatcttatgtaaatctattttctaatctaattcaccgtttttctaatagaataacaagta 23793430  T
Q  101 ttaatcgaaggaccgaaaggtgaagtttaata 132  Q
    ||||| |||||||| ||| |||||||||||||    
T  23793429 ttaatagaaggaccaaaatgtgaagtttaata 23793398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 93; E-Value: 1e-45
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 12345874 - 12345715
Alignment:
Q  1 tctaatgacctaatccctatcaaaccaagcctcgaaccctaattttatgtaaatttattttctaatctatttcaccgtttttctaatgaaataacaagta 100  Q
    ||||||||||||||| |||| ||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||| || ||||  |||||||||||    
T  12345874 tctaatgacctaatcgctattaaaccaagcctcgaaccctaattttatgtaaatctattttctaatctaattcaccgttcttataat-caataacaagta 12345776  T
Q  101 ttaatcgaaggaccgaaaggtgaagtttaatagttgttatttcatcatcacaaatatcaag 161  Q
    |||||||| ||| |||||| |||||||||||||||| ||||   | |||||||||||||||    
T  12345775 ttaatcgatggatcgaaagatgaagtttaatagttgctattgattaatcacaaatatcaag 12345715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 81; E-Value: 2e-38
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 5675637 - 5675736
Alignment:
Q  1 tctaatgacctaatccctatcaaaccaagcctcgaaccctaattttatgtaaatttattttctaatctatttcaccgtttttctaatgaaataacaagta 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||| ||||||| |||||||||    
T  5675637 tctaatgacctaatccctatcaaaccaagcctcgaaccctaattttatgtaaatctattttctaatcta-ttcaccgtttttataatgaattaacaagta 5675735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 81; E-Value: 2e-38
Query Start/End: Original strand, 1 - 157
Target Start/End: Complemental strand, 11922361 - 11922206
Alignment:
Q  1 tctaatgacctaatccctatcaaaccaagcctcgaaccctaattttatgtaaatttattttctaatctatttcaccgtttttctaatgaaataacaagta 100  Q
    ||||||||||||||||  |||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||| || ||||  |||||||| ||    
T  11922361 tctaatgacctaatcctaatcaaaccaagcctcgaaccctaattttatgtaaatctattttctaatctattttaccgttcttataat-caataacaaata 11922263  T
Q  101 ttaatcgaaggaccgaaaggtgaagtttaatagttgttatttcatcatcacaaatat 157  Q
    |||||| | ||| |||||| ||||||||| || ||||||||   |||||||||||||    
T  11922262 ttaatcaatggatcgaaagatgaagtttagtaattgttattgattcatcacaaatat 11922206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 5513558 - 5513451
Alignment:
Q  1 tctaatgacctaatccctatcaaaccaagcctcgaaccctaattttatgtaaatttattttctaatctatttcaccgtttttctaatgaaataacaagta 100  Q
    |||||||| |||||||||||||||||||| |||||||||||||||||||||||| |||||||| |||||||||| ||||||| |||||||  ||||||||    
T  5513558 tctaatgagctaatccctatcaaaccaagtctcgaaccctaattttatgtaaatatattttctgatctatttcatcgtttttataatgaatcaacaagta 5513459  T
Q  101 ttaatcga 108  Q
    ||||||||    
T  5513458 ttaatcga 5513451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 1 - 160
Target Start/End: Original strand, 24493112 - 24493273
Alignment:
Q  1 tctaatgacctaatccctatcaaaccaagcctcgaaccctaattttatgt--aaatttattttctaatcta-tttcaccgtttttctaatgaaataacaa 97  Q
    ||||||||| |||| ||||||||||||||||| || ||||||| |||| |  |||| |||||||||||||| |||||  ||||| | |||  ||||||||    
T  24493112 tctaatgacttaattcctatcaaaccaagcctagagccctaatcttatatttaaatctattttctaatctaatttcattgtttt-caaattcaataacaa 24493210  T
Q  98 gtattaatcgaaggaccgaaaggtgaagtttaatagttgttatttcatcatcacaaatatcaa 160  Q
    ||||||| ||||||||||||||| |||||||||||||||||||||||||||| ||||||||||    
T  24493211 gtattaaacgaaggaccgaaaggcgaagtttaatagttgttatttcatcatctcaaatatcaa 24493273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 69; E-Value: 3e-31
Query Start/End: Original strand, 1 - 157
Target Start/End: Complemental strand, 11902543 - 11902388
Alignment:
Q  1 tctaatgacctaatccctatcaaaccaagcctcgaaccctaattttatgtaaatttattttctaatctatttcaccgtttttctaatgaaataacaagta 100  Q
    ||||||||  ||||||  |||||||||||| |  ||||||||||||||||||   || ||||||||||||||||||||| || || | || |||||||||    
T  11902543 tctaatgatataatcctaatcaaaccaagctttaaaccctaattttatgtaaccctaatttctaatctatttcaccgttcttatattcaa-taacaagta 11902445  T
Q  101 ttaatcgaaggaccgaaaggtgaagtttaatagttgttatttcatcatcacaaatat 157  Q
    |||||||||||| |||||| |||||||||||||||||||||   |||||||||||||    
T  11902444 ttaatcgaaggatcgaaagatgaagtttaatagttgttattgattcatcacaaatat 11902388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 65; E-Value: 7e-29
Query Start/End: Original strand, 1 - 157
Target Start/End: Original strand, 9857377 - 9857532
Alignment:
Q  1 tctaatgacctaatccctatcaaaccaagcctcgaaccctaattttatgtaaatttattttctaatctatttcaccgtttttctaatgaaataacaagta 100  Q
    ||||||||| ||||||  |||||||||| | |  ||||||||||||| ||||   || |||||||||||||||||| || || |||| || |||||||||    
T  9857377 tctaatgacataatcctaatcaaaccaaactttaaaccctaattttacgtaaccctaatttctaatctatttcaccattcttataatcaa-taacaagta 9857475  T
Q  101 ttaatcgaaggaccgaaaggtgaagtttaatagttgttatttcatcatcacaaatat 157  Q
    |||||||||||| |||||| |||||||||||||||||||||   |||||||||||||    
T  9857476 ttaatcgaaggatcgaaagatgaagtttaatagttgttattgactcatcacaaatat 9857532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 65; E-Value: 7e-29
Query Start/End: Original strand, 1 - 157
Target Start/End: Complemental strand, 16953828 - 16953673
Alignment:
Q  1 tctaatgacctaatccctatcaaaccaagcctcgaaccctaattttatgtaaatttattttctaatctatttcaccgtttttctaatgaaataacaagta 100  Q
    ||||||||| ||||||  ||||||| |||| |  ||||||||||||||||||   || |||||| |||||||||||||| || |||| || |||||||||    
T  16953828 tctaatgacataatcctaatcaaactaagctttaaaccctaattttatgtaatcctactttctattctatttcaccgttcttataatcaa-taacaagta 16953730  T
Q  101 ttaatcgaaggaccgaaaggtgaagtttaatagttgttatttcatcatcacaaatat 157  Q
    ||||||||| || |||||| |||||||||||||||||||||   |||||||||||||    
T  16953729 ttaatcgaaagatcgaaagatgaagtttaatagttgttattgattcatcacaaatat 16953673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 60; E-Value: 7e-26
Query Start/End: Original strand, 1 - 139
Target Start/End: Original strand, 55267750 - 55267888
Alignment:
Q  1 tctaatgacctaatccctatcaaaccaagcctcgaaccctaattttatgtaaatttattttctaatct-atttcaccgtttttctaatgaaataacaagt 99  Q
    ||||||||| |||| ||||||||| ||||||| |||||||||| |||| ||||| ||||||||||||| |||||| || ||||| ||   | ||||||||    
T  55267750 tctaatgacttaattcctatcaaatcaagcctagaaccctaatcttatttaaatctattttctaatctaatttcatcg-ttttcaaactcagtaacaagt 55267848  T
Q  100 attaatcgaaggaccgaaaggtgaagtttaatagttgtta 139  Q
    ||||| ||||||||||||| ||||||||| ||||||||||    
T  55267849 attaaacgaaggaccgaaatgtgaagtttgatagttgtta 55267888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 90 - 160
Target Start/End: Original strand, 21276881 - 21276951
Alignment:
Q  90 aataacaagtattaatcgaaggaccgaaaggtgaagtttaatagttgttatttcatcatcacaaatatcaa 160  Q
    ||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||| ||||||||||    
T  21276881 aataacaagtattaaacgaaggaccgaaatgtgaagtttaatagttgttatttcatcatctcaaatatcaa 21276951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 57; E-Value: 4e-24
Query Start/End: Original strand, 1 - 141
Target Start/End: Original strand, 10731308 - 10731447
Alignment:
Q  1 tctaatgacctaatccctatcaaaccaagcctcgaaccctaattttatgtaaatttattttctaatctatttcaccgtttttctaatgaaataacaagta 100  Q
    ||||||||| ||||||  |||||| ||||| |  ||||||||||||||||||   || ||||||||||||||||||| | || |||| || |||||| ||    
T  10731308 tctaatgacataatcctaatcaaatcaagctttaaaccctaattttatgtaaccctaatttctaatctatttcaccgatcttataatcaa-taacaaata 10731406  T
Q  101 ttaatcgaaggaccgaaaggtgaagtttaatagttgttatt 141  Q
    ||||||||| || |||||| |||||||||||||||||||||    
T  10731407 ttaatcgaacgatcgaaagatgaagtttaatagttgttatt 10731447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 57; E-Value: 4e-24
Query Start/End: Original strand, 1 - 141
Target Start/End: Original strand, 10945077 - 10945216
Alignment:
Q  1 tctaatgacctaatccctatcaaaccaagcctcgaaccctaattttatgtaaatttattttctaatctatttcaccgtttttctaatgaaataacaagta 100  Q
    ||||||||| ||||||  |||||| ||||| |  ||||||||||||||||||   || ||||||||||||||||||| | || |||| || |||||| ||    
T  10945077 tctaatgacataatcctaatcaaatcaagctttaaaccctaattttatgtaaccctaatttctaatctatttcaccgatcttataatcaa-taacaaata 10945175  T
Q  101 ttaatcgaaggaccgaaaggtgaagtttaatagttgttatt 141  Q
    ||||||||| || |||||| |||||||||||||||||||||    
T  10945176 ttaatcgaacgatcgaaagatgaagtttaatagttgttatt 10945216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 5 - 66
Target Start/End: Complemental strand, 13510735 - 13510674
Alignment:
Q  5 atgacctaatccctatcaaaccaagcctcgaaccctaattttatgtaaatttattttctaat 66  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||    
T  13510735 atgacctaatccctatcaaaccaagcctagaaccctaattttatgtaaatctattttctaat 13510674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 92 - 160
Target Start/End: Original strand, 4743044 - 4743112
Alignment:
Q  92 taacaagtattaatcgaaggaccgaaaggtgaagtttaatagttgttatttcatcatcacaaatatcaa 160  Q
    |||||||||| || ||||||||||||| |||||||||||||||||||||||||||||| ||||||||||    
T  4743044 taacaagtatcaaacgaaggaccgaaaagtgaagtttaatagttgttatttcatcatctcaaatatcaa 4743112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 52; E-Value: 4e-21
Query Start/End: Original strand, 90 - 165
Target Start/End: Original strand, 17465098 - 17465173
Alignment:
Q  90 aataacaagtattaatcgaaggaccgaaaggtgaagtttaatagttgttatttcatcatcacaaatatcaagtgaa 165  Q
    ||||||||||||| | ||||| ||| |||||||||||||||||||||||||||||||||| |||||||||| ||||    
T  17465098 aataacaagtatttaacgaagtaccaaaaggtgaagtttaatagttgttatttcatcatctcaaatatcaaatgaa 17465173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 49; E-Value: 2e-19
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 18749707 - 18749775
Alignment:
Q  1 tctaatgacctaatccctatcaaaccaagcctcgaaccctaattttatgtaaatttattttctaatcta 69  Q
    |||||||||||||| ||||||||||||| ||  ||||||||||||||||||||| ||||||||||||||    
T  18749707 tctaatgacctaattcctatcaaaccaaacccagaaccctaattttatgtaaatatattttctaatcta 18749775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 5 - 101
Target Start/End: Original strand, 38652331 - 38652426
Alignment:
Q  5 atgacctaatccctatcaaaccaagcctcgaaccctaattttatgtaaatttattttctaatcta-tttcaccgtttttctaatgaaataacaagtat 101  Q
    |||||||||||   ||||||| |||||||||||| |||||||||||||| | ||||||||||||| ||||||||||||| ||||||| ||||||||||    
T  38652331 atgacctaatcataatcaaactaagcctcgaacc-taattttatgtaaact-attttctaatctaatttcaccgtttttataatgaattaacaagtat 38652426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 39; E-Value: 0.0000000000002
Query Start/End: Original strand, 56 - 161
Target Start/End: Original strand, 25190409 - 25190515
Alignment:
Q  56 tattttctaatctatttcaccgtttttctaatgaaataacaagtatt-aatcgaaggaccgaaaggtgaagtttaatagttgttatttcatcatcacaaa 154  Q
    ||||||||||||||||| ||||||||| ||||||| ||||||||||| |||| |   ||| ||||| ||   || |||||||||| ||||| ||||||||    
T  25190409 tattttctaatctattttaccgtttttataatgaattaacaagtattaaatcaataaaccaaaaggcgatagttgatagttgttaattcataatcacaaa 25190508  T
Q  155 tatcaag 161  Q
    |||||||    
T  25190509 tatcaag 25190515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 38; E-Value: 0.0000000000009
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 13883387 - 13883334
Alignment:
Q  1 tctaatgacctaatccctatcaaaccaagcctcgaaccctaattttatgtaaat 54  Q
    ||||||||||||||||   ||||||||||||| |||||||||||||||||||||    
T  13883387 tctaatgacctaatcctattcaaaccaagcctagaaccctaattttatgtaaat 13883334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 12347541 - 12347593
Alignment:
Q  1 tctaatgacctaatccctatcaaaccaagcctcgaaccctaattttatgtaaa 53  Q
    ||||||||||||||||   ||||||||||||| ||||||||||||||||||||    
T  12347541 tctaatgacctaatcctattcaaaccaagcctagaaccctaattttatgtaaa 12347593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 36; E-Value: 0.00000000001
Query Start/End: Original strand, 19 - 97
Target Start/End: Original strand, 9192423 - 9192502
Alignment:
Q  19 atcaaaccaagcctcgaaccctaattttatgtaaatttattttctaatct-atttcaccgtttttctaatgaaataacaa 97  Q
    ||||||||| |||||||||||| ||||||| ||||| || |||||||||| |||| || |||||| ||||||| ||||||    
T  9192423 atcaaaccatgcctcgaaccctcattttatataaatctactttctaatctaattttactgtttttataatgaattaacaa 9192502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 35; E-Value: 0.00000000006
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 12808101 - 12808011
Alignment:
Q  1 tctaatgacctaatccctatcaaaccaagcctcgaaccctaattttatgtaaatttattttctaatct-atttcaccgtttttctaatgaa 90  Q
    ||||||||| ||||||  |||||||||| ||   ||||||| |||||| ||||| || |||||||||| |||||||||||||| |||||||    
T  12808101 tctaatgacgtaatcctaatcaaaccaaaccataaaccctagttttatataaatctactttctaatctaatttcaccgtttttataatgaa 12808011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 19 - 60
Target Start/End: Complemental strand, 33330899 - 33330858
Alignment:
Q  19 atcaaaccaagcctcgaaccctaattttatgtaaatttattt 60  Q
    |||||||||||| ||||||||||||||||||||||| |||||    
T  33330899 atcaaaccaagcttcgaaccctaattttatgtaaatctattt 33330858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.0000000009
Query Start/End: Original strand, 42 - 97
Target Start/End: Complemental strand, 3772069 - 3772013
Alignment:
Q  42 attttatgtaaatttattttctaatcta-tttcaccgtttttctaatgaaataacaa 97  Q
    ||||||| ||||| |||||||||||||| ||||||||||||| ||||||| ||||||    
T  3772069 attttatataaatctattttctaatctaatttcaccgtttttataatgaattaacaa 3772013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.0000000009
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 4742982 - 4743046
Alignment:
Q  1 tctaatgacctaatccctatcaaaccaagcctcgaaccctaattttatgtaaatttattttctaa 65  Q
    ||||||| | |||| |||||||||||||| || |||||||||| |||| ||||| ||||||||||    
T  4742982 tctaatggcttaattcctatcaaaccaagtctagaaccctaatcttatttaaatctattttctaa 4743046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 64 - 161
Target Start/End: Complemental strand, 33330866 - 33330768
Alignment:
Q  64 aatctatttcaccgtttttctaatgaaataacaagtattaa-tcgaaggaccgaaaggtgaagtttaatagttgttatttcatcatcacaaatatcaag 161  Q
    ||||||||||||||||||  |||||||  |||||||||||| || |   ||||||||| || | || |||| ||||| ||||| |||||||||||||||    
T  33330866 aatctatttcaccgttttaataatgaatcaacaagtattaaatcaataaaccgaaaggcgagggttgatagctgttaattcataatcacaaatatcaag 33330768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 7197391 - 7197459
Alignment:
Q  1 tctaatgacctaatccctatcaaaccaagcctcgaaccctaattttatgtaaatttattttctaatcta 69  Q
    ||||||||| ||||||  |||||||||||| |  ||||||||||||||||||   || |||||||||||    
T  7197391 tctaatgacttaatcctaatcaaaccaagctttaaaccctaattttatgtaaccctaatttctaatcta 7197459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 90 - 149
Target Start/End: Original strand, 29367291 - 29367350
Alignment:
Q  90 aataacaagtattaatcgaaggaccgaaaggtgaagtttaatagttgttatttcatcatc 149  Q
    ||||| ||||||| | ||| |||||||||||||||||  ||||  |||||||||||||||    
T  29367291 aataaaaagtattgaacgatggaccgaaaggtgaagtccaataactgttatttcatcatc 29367350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 19 - 81
Target Start/End: Complemental strand, 43701474 - 43701411
Alignment:
Q  19 atcaaaccaagcctcgaaccctaattttatgtaaatttattttctaatct-atttcaccgtttt 81  Q
    |||||||||||| | || |||||||||||| ||||| || |||||||||| | |||||||||||    
T  43701474 atcaaaccaagcattgagccctaattttatataaatctactttctaatctaaattcaccgtttt 43701411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 117; Significance: 7e-60; HSPs: 28)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 117; E-Value: 7e-60
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 26194405 - 26194565
Alignment:
Q  1 tctaatgacctaatccctatcaaaccaagcctcgaaccctaattttatgtaaatttattttctaatctatttcaccgtttttctaatgaaataacaagta 100  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||| ||||||||||| ||||||| |||||||||    
T  26194405 tctaatgacctaatccctatcaaaccaaacctcgaaccctaattttatgtaaatctattttctaatctatctcaccgtttttataatgaattaacaagta 26194504  T
Q  101 ttaatcgaaggaccgaaaggtgaagtttaatagttgttatttcatcatcacaaatatcaag 161  Q
    |||||||| ||||||||||| |||||||||| ||| ||| ||||| |||||||||||||||    
T  26194505 ttaatcgatggaccgaaaggcgaagtttaatggtttttaattcataatcacaaatatcaag 26194565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 97; E-Value: 6e-48
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 23299060 - 23299219
Alignment:
Q  1 tctaatgacctaatccctatcaaaccaagcctcgaaccctaattttatgtaaatttattttctaatctatttcaccgtttttctaatgaaataacaagta 100  Q
    ||||||||||||||||||| |||||||||||| ||||||||||||||||||||| ||||||||||||||||||||| || || ||||  |||||||||||    
T  23299060 tctaatgacctaatccctaccaaaccaagcctggaaccctaattttatgtaaatctattttctaatctatttcaccattcttataat-caataacaagta 23299158  T
Q  101 ttaatcgaaggaccgaaaggtgaagtttaatagttgttatttcatcatcacaaatatcaag 161  Q
    |||||||| ||| |||||| |||||||||||||||||||||   || ||||||||||||||    
T  23299159 ttaatcgatggatcgaaagatgaagtttaatagttgttattgattcgtcacaaatatcaag 23299219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 86; E-Value: 2e-41
Query Start/End: Original strand, 1 - 157
Target Start/End: Original strand, 15421268 - 15421424
Alignment:
Q  1 tctaatgacctaatccctatcaaaccaagcctcgaaccctaattttatgtaaatttattttctaatcta-tttcaccgtttttctaatgaaataacaagt 99  Q
    |||||||||||||||||||| |||| |||||| |||||||||| |||| ||||| |||||||||||||| ||||| |||||| | ||   | ||||||||    
T  15421268 tctaatgacctaatccctatgaaactaagcctagaaccctaatcttatttaaatctattttctaatctaatttcatcgtttt-caaactcagtaacaagt 15421366  T
Q  100 attaatcgaaggaccgaaaggtgaagtttaatagttgttatttcatcatcacaaatat 157  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  15421367 attaaacgaaggaccgaaaggtgaagtttaatagttgttatttcatcatctcaaatat 15421424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 85; E-Value: 8e-41
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 16384873 - 16384773
Alignment:
Q  1 tctaatgacctaatccctatcaaaccaagcctcgaaccctaattttatgtaaatttattttctaatctatttcaccgtttttctaatgaaataacaagta 100  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||| |||||||||    
T  16384873 tctaatgacataatccctatcaaaccaagcctcgaaccctaattttatgtaaatctattttctaatctatttcaccgtttttataatgaattaacaagta 16384774  T
Q  101 t 101  Q
    |    
T  16384773 t 16384773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 83; E-Value: 1e-39
Query Start/End: Original strand, 11 - 141
Target Start/End: Complemental strand, 20860600 - 20860472
Alignment:
Q  11 taatccctatcaaaccaagcctcgaaccctaattttatgtaaatttattttctaatctatttcaccgtttttctaatgaaataacaagtattaatcgaag 110  Q
    ||||||||||||||| ||||||||||||||||| |||||||||| |||||||||||||| |||||||||||| ||||  |||||||||||||||||||||    
T  20860600 taatccctatcaaac-aagcctcgaaccctaatattatgtaaatctattttctaatctaattcaccgtttttataat-caataacaagtattaatcgaag 20860503  T
Q  111 gaccgaaaggtgaagtttaatagttgttatt 141  Q
     | |||||| |||||||||||||||||||||    
T  20860502 aatcgaaagatgaagtttaatagttgttatt 20860472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 82; E-Value: 5e-39
Query Start/End: Original strand, 1 - 141
Target Start/End: Original strand, 20497727 - 20497867
Alignment:
Q  1 tctaatgacctaatccctatcaaaccaagcctcgaaccc-taattttatgtaaatttattttctaatctatttcaccgtttttctaatgaaataacaagt 99  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||| ||| ||| |||||||||||||| ||||| |||||| ||||  |||||| |||    
T  20497727 tctaatgacctaatccctatcaaaccaagcctcgaacccttaattttttgttaatctattttctaatctaattcactgtttttataat-caataaccagt 20497825  T
Q  100 attaatcgaaggaccgaaaggtgaagtttaatagttgttatt 141  Q
    ||||||||||| | |||||| |||||||||||||||||||||    
T  20497826 attaatcgaagaatcgaaagatgaagtttaatagttgttatt 20497867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 81; E-Value: 2e-38
Query Start/End: Original strand, 1 - 157
Target Start/End: Complemental strand, 25404997 - 25404842
Alignment:
Q  1 tctaatgacctaatccctatcaaaccaagcctcgaaccctaattttatgtaaatttattttctaatctatttcaccgtttttctaatgaaataacaagta 100  Q
    ||||||||||||||||  |||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||| || ||||  ||||| || ||    
T  25404997 tctaatgacctaatcctaatcaaaccaagcctcgaaccctaattttatttaaatctattttctaatctatttcaccgttcttataat-caataagaaata 25404899  T
Q  101 ttaatcgaaggaccgaaaggtgaagtttaatagttgttatttcatcatcacaaatat 157  Q
    |||||||| | | |||||| |||||||||||| ||||||||   |||||||||||||    
T  25404898 ttaatcgatgaatcgaaagatgaagtttaataattgttattgattcatcacaaatat 25404842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 73; E-Value: 1e-33
Query Start/End: Original strand, 1 - 160
Target Start/End: Complemental strand, 16527571 - 16527412
Alignment:
Q  1 tctaatgacctaatccctatcaaaccaagcctcgaaccctaattttatgtaaatttattttctaatcta-tttcaccgtttttctaatgaaataacaagt 99  Q
    |||||| || |||| | ||||||| ||||||| |||||||||| |||| ||||| |||||||||||||| |||||  ||||| | ||   ||||||||||    
T  16527571 tctaataacttaattcatatcaaatcaagcctagaaccctaatcttatttaaatctattttctaatctaatttcattgtttt-caaactcaataacaagt 16527473  T
Q  100 attaatcgaaggaccgaaaggtgaagtttaatagttgttatttcatcatcacaaatatcaa 160  Q
    ||||| ||||||||||||||||||||||||||| |||||||||||||||| ||||||||||    
T  16527472 attaaacgaaggaccgaaaggtgaagtttaataattgttatttcatcatctcaaatatcaa 16527412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 70; E-Value: 7e-32
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 16148367 - 16148266
Alignment:
Q  1 tctaatgacctaatccctatcaaaccaagcctcgaaccctaattttatgtaaatttattttctaatct-atttcaccgtttttctaatgaaataacaagt 99  Q
    ||||||||||||||||  |||||||||||||||||||||||||||||||||||| || |||||||||| |||||||||||||| ||||||| ||||||||    
T  16148367 tctaatgacctaatcctaatcaaaccaagcctcgaaccctaattttatgtaaatctactttctaatctaatttcaccgtttttataatgaattaacaagt 16148268  T
Q  100 at 101  Q
    ||    
T  16148267 at 16148266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 69; E-Value: 3e-31
Query Start/End: Original strand, 1 - 160
Target Start/End: Original strand, 2130118 - 2130276
Alignment:
Q  1 tctaatgacctaatccctatcaaaccaagcctcgaaccctaattttatgtaaatttattttctaatcta-tttcaccgtttttctaatgaaataacaagt 99  Q
    |||||||||||||||| ||||||||||||||| |||||||||| |||| ||||| |||||||||||||| ||||  |||||| | ||   |  || ||||    
T  2130118 tctaatgacctaatcc-tatcaaaccaagcctagaaccctaatcttatttaaatctattttctaatctaatttcgtcgtttt-caaactcagcaataagt 2130215  T
Q  100 attaatcgaaggaccgaaaggtgaagtttaatagttgttatttcatcatcacaaatatcaa 160  Q
    ||||| ||||||||||||| |||||||||||||||||||| ||||||||| ||||||||||    
T  2130216 attaaacgaaggaccgaaatgtgaagtttaatagttgttagttcatcatctcaaatatcaa 2130276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 62; E-Value: 4e-27
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 13799357 - 13799256
Alignment:
Q  1 tctaatgacctaatccctatcaaaccaagcctcgaaccctaattttatgtaaatttattttctaatct-atttcaccgtttttctaatgaaataacaagt 99  Q
    ||||||||||||||||  |||||||||||| ||||||||||||||||||||||| || |||||||||| |||||||||||||| ||||||| ||| ||||    
T  13799357 tctaatgacctaatcctgatcaaaccaagcatcgaaccctaattttatgtaaatctaatttctaatctaatttcaccgtttttataatgaattaagaagt 13799258  T
Q  100 at 101  Q
    ||    
T  13799257 at 13799256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 12059698 - 12059597
Alignment:
Q  1 tctaatgacctaatccctatcaaaccaagcctcgaaccctaattttatgtaaatttattttctaatct-atttcaccgtttttctaatgaaataacaagt 99  Q
    ||||||||||| |||   |||||||||| ||||||||||||| || ||||||||||| |||||||||| |||||||||||||| ||||||| ||||||||    
T  12059698 tctaatgacctgatcataatcaaaccaaacctcgaaccctaagttgatgtaaatttactttctaatctaatttcaccgtttttataatgaattaacaagt 12059599  T
Q  100 at 101  Q
    ||    
T  12059598 at 12059597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 56 - 165
Target Start/End: Original strand, 20448634 - 20448742
Alignment:
Q  56 tattttctaatctatttcaccgtttttctaatgaaataacaagtattaatcgaaggaccgaaaggtgaagtttaatagttgttatttcatcatcacaaat 155  Q
    |||||||||||||| |||||||||||| |||| || |||| ||||||||||||| ||  ||||| |||||||||||||||||||||   | |||||||||    
T  20448634 tattttctaatctagttcaccgtttttataatcaa-taaccagtattaatcgaatgattgaaagatgaagtttaatagttgttattgattaatcacaaat 20448732  T
Q  156 atcaagtgaa 165  Q
    ||||||||||    
T  20448733 atcaagtgaa 20448742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 56 - 165
Target Start/End: Original strand, 20534400 - 20534508
Alignment:
Q  56 tattttctaatctatttcaccgtttttctaatgaaataacaagtattaatcgaaggaccgaaaggtgaagtttaatagttgttatttcatcatcacaaat 155  Q
    |||||||||||||| |||||||||||| |||| || |||| ||||||||||||| ||  ||||| |||||||||||||||||||||   | |||||||||    
T  20534400 tattttctaatctagttcaccgtttttataatcaa-taaccagtattaatcgaatgattgaaagatgaagtttaatagttgttattgattaatcacaaat 20534498  T
Q  156 atcaagtgaa 165  Q
    ||||||||||    
T  20534499 atcaagtgaa 20534508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 57 - 161
Target Start/End: Complemental strand, 20898513 - 20898410
Alignment:
Q  57 attttctaatctatttcaccgtttttctaatgaaataacaagtattaatcgaaggaccgaaaggtgaagtttaatagttgttatttcatcatcacaaata 156  Q
    |||||||||||||||||| |||| || |||| || ||||||||||||||||| ||| | |||| |||||||||||||||||||||   ||||||||||||    
T  20898513 attttctaatctatttcatcgttcttataatcaa-taacaagtattaatcgatggatcaaaagatgaagtttaatagttgttattaattcatcacaaata 20898415  T
Q  157 tcaag 161  Q
    |||||    
T  20898414 tcaag 20898410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 141
Target Start/End: Complemental strand, 52755267 - 52755128
Alignment:
Q  1 tctaatgacctaatccctatcaaaccaagcctcgaaccctaattttatgtaaatttattttctaatctatttcaccgtttttctaatgaaataacaagta 100  Q
    ||||||||| ||||||  |||||||||||  |  | |||||| |||||||||   || ||||||||||||||||||||| ||  ||| || |||||||||    
T  52755267 tctaatgacataatcctaatcaaaccaagttttaacccctaactttatgtaaccctaatttctaatctatttcaccgttcttacaatcaa-taacaagta 52755169  T
Q  101 ttaatcgaaggaccgaaaggtgaagtttaatagttgttatt 141  Q
    |||||||||||| |||||| | |||||||||||||||||||    
T  52755168 ttaatcgaaggatcgaaagattaagtttaatagttgttatt 52755128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 47; E-Value: 4e-18
Query Start/End: Original strand, 90 - 160
Target Start/End: Original strand, 8236507 - 8236577
Alignment:
Q  90 aataacaagtattaatcgaaggaccgaaaggtgaagtttaatagttgttatttcatcatcacaaatatcaa 160  Q
    |||||||| |||||| |||| |||||||| |||||||||||||||||||||||||||||| || |||||||    
T  8236507 aataacaaatattaaacgaatgaccgaaatgtgaagtttaatagttgttatttcatcatctcatatatcaa 8236577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 43; E-Value: 9e-16
Query Start/End: Original strand, 92 - 154
Target Start/End: Complemental strand, 12727030 - 12726968
Alignment:
Q  92 taacaagtattaatcgaaggaccgaaaggtgaagtttaatagttgttatttcatcatcacaaa 154  Q
    ||||||||||||| |||| |||||||||||  |||||||||||||||||||||||||| ||||    
T  12727030 taacaagtattaaacgaaagaccgaaaggtatagtttaatagttgttatttcatcatctcaaa 12726968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 41; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 15346767 - 15346611
Alignment:
Q  1 tctaatgacctaatccctatcaaaccaagcctcgaaccctaattttatgtaaatttattttctaatctatt-tcaccgtttttctaatgaaataacaagt 99  Q
    |||||||||||||||    ||||| |||||||  ||| ||||||||||||||   |||||||||||||| | ||||||||||   ||   | ||| ||||    
T  15346767 tctaatgacctaatcttattcaaagcaagcctaaaactctaattttatgtaaccctattttctaatctaatctcaccgttttcaaaacttagtaataagt 15346668  T
Q  100 attaatcgaaggaccgaaaggtgaagtttaatagttgttatttcatcatcacaaata 156  Q
    |||||  ||||||||  || |||| ||||||||||||||||||||||||| ||||||    
T  15346667 attaaaagaaggacccgaatgtgatgtttaatagttgttatttcatcatctcaaata 15346611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 36; E-Value: 0.00000000001
Query Start/End: Original strand, 19 - 97
Target Start/End: Complemental strand, 28763775 - 28763696
Alignment:
Q  19 atcaaaccaagcctcgaaccctaattttatgtaaatttattttctaatct-atttcaccgtttttctaatgaaataacaa 97  Q
    |||||||||||||| ||||||||||||||| ||||| || |||||||||| ||||||| ||| |  ||||||| ||||||    
T  28763775 atcaaaccaagccttgaaccctaattttatataaatatactttctaatctaatttcactgttatcataatgaattaacaa 28763696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.0000000009
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 52169161 - 52169265
Alignment:
Q  1 tctaatgacctaatccctatcaaaccaagcctcgaaccctaattttatgtaaatttattttctaatct-atttcaccgtttttctaatgaaataacaagt 99  Q
    ||||||||| ||||||  |||||||||| ||   ||||||| |||||| ||||| || |||||||||| |||||||||||||| |||| || || ||| |    
T  52169161 tctaatgacataatcctaatcaaaccaaaccataaaccctagttttatataaatctactttctaatctaatttcaccgtttttataataaattagcaatt 52169260  T
Q  100 attaa 104  Q
    |||||    
T  52169261 attaa 52169265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 3 - 97
Target Start/End: Original strand, 20412424 - 20412518
Alignment:
Q  3 taatgacctaatccctatcaaaccaagcctcgaaccctaattttatgtaaatttattttctaatct-atttcaccgtttttctaatgaaataacaa 97  Q
    ||||||| ||||||  ||||||||||||||  ||||||||||||||||||   || |||||||||| | |||||||||||  ||||||| ||||||    
T  20412424 taatgacataatcctaatcaaaccaagcctt-aaccctaattttatgtaaccctaatttctaatctaaattcaccgttttcataatgaattaacaa 20412518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 21924830 - 21924883
Alignment:
Q  1 tctaatgacctaatccctatcaaaccaagcctcgaaccctaattttatgtaaat 54  Q
    ||||||||| ||||||   |||||||||||||  ||||||||||||||||||||    
T  21924830 tctaatgacttaatcctattcaaaccaagcctaaaaccctaattttatgtaaat 21924883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 24680313 - 24680381
Alignment:
Q  1 tctaatgacctaatccctatcaaaccaagcctcgaaccctaattttatgtaaattta-ttttctaatcta 69  Q
    ||||||||| |||||  |||||||||||||||  |||||||||||||||| ||| || ||||||||||||    
T  24680313 tctaatgacataatct-tatcaaaccaagcctataaccctaattttatgtgaatctatttttctaatcta 24680381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 91 - 148
Target Start/End: Original strand, 28553549 - 28553605
Alignment:
Q  91 ataacaagtattaatcgaaggaccgaaaggtgaagtttaatagttgttatttcatcat 148  Q
    ||||||| ||| || ||||||| ||||||||||||||| ||| |||||||||||||||    
T  28553549 ataacaaatatcaaacgaaggatcgaaaggtgaagtttgata-ttgttatttcatcat 28553605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 28208054 - 28208122
Alignment:
Q  1 tctaatgacctaatccctatcaaaccaagcctcgaaccctaattttatgtaaatttattttctaatcta 69  Q
    ||||||||| ||||||  ||||||||||||||  ||||||||| ||||||||   || |||||||||||    
T  28208054 tctaatgacataatcctaatcaaaccaagccttaaaccctaatcttatgtaaccctagtttctaatcta 28208122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 29
Target Start/End: Complemental strand, 30818985 - 30818957
Alignment:
Q  1 tctaatgacctaatccctatcaaaccaag 29  Q
    |||||||||||||||||||||||||||||    
T  30818985 tctaatgacctaatccctatcaaaccaag 30818957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 41802442 - 41802510
Alignment:
Q  1 tctaatgacctaatccctatcaaaccaagcctcgaaccctaattttatgtaaatttattttctaatcta 69  Q
    ||||||||| ||||||  ||||||||||||||  ||| ||||| ||||||||  ||| |||||||||||    
T  41802442 tctaatgacataatcctaatcaaaccaagccttaaacactaatcttatgtaaccttagtttctaatcta 41802510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 110; Significance: 1e-55; HSPs: 4)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 8 - 161
Target Start/End: Original strand, 33054 - 33207
Alignment:
Q  8 acctaatccctatcaaaccaagcctcgaaccctaattttatgtaaatttattttctaatctatttcaccgtttttctaatgaaataacaagtattaatcg 107  Q
    ||||||||||||||||||||||||| ||||||||||||||||||| | ||||||||||||||||||||||| ||| ||||||| ||||||||||||||||    
T  33054 acctaatccctatcaaaccaagccttgaaccctaattttatgtaagtctattttctaatctatttcaccgtatttataatgaattaacaagtattaatcg 33153  T
Q  108 aaggaccgaaaggtgaagtttaatagttgttatttcatcatcacaaatatcaag 161  Q
    | |||| |||| |||||||||||||||||||| ||||| |||||||||||||||    
T  33154 atggactgaaaagtgaagtttaatagttgttaattcataatcacaaatatcaag 33207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 8 - 161
Target Start/End: Original strand, 38361 - 38514
Alignment:
Q  8 acctaatccctatcaaaccaagcctcgaaccctaattttatgtaaatttattttctaatctatttcaccgtttttctaatgaaataacaagtattaatcg 107  Q
    ||||||||||||||||||||||||| ||||||||||||||||||| | ||||||||||||||||||||||| ||| ||||||| ||||||||||||||||    
T  38361 acctaatccctatcaaaccaagccttgaaccctaattttatgtaagtctattttctaatctatttcaccgtatttataatgaattaacaagtattaatcg 38460  T
Q  108 aaggaccgaaaggtgaagtttaatagttgttatttcatcatcacaaatatcaag 161  Q
    | |||| |||| |||||||||||||||||||| ||||| |||||||||||||||    
T  38461 atggactgaaaagtgaagtttaatagttgttaattcataatcacaaatatcaag 38514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #3
Raw Score: 83; E-Value: 1e-39
Query Start/End: Original strand, 3 - 141
Target Start/End: Complemental strand, 82522 - 82385
Alignment:
Q  3 taatgacctaatccctatcaaaccaagcctcgaaccctaattttatgtaaatttattttctaatctatttcaccgtttttctaatgaaataacaagtatt 102  Q
    ||||||||||||||||||  |||||||| | ||||||||||||||||||||| ||||||||||||||||||||||||||| ||||  |||||||||||||    
T  82522 taatgacctaatccctatacaaccaagctttgaaccctaattttatgtaaatctattttctaatctatttcaccgtttttataat-caataacaagtatt 82424  T
Q  103 aatcgaaggaccgaaaggtgaagtttaatagttgttatt 141  Q
    |||||| ||| |||||| ||| ||| |||||||||||||    
T  82423 aatcgatggatcgaaagatgatgttaaatagttgttatt 82385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #4
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 19 - 97
Target Start/End: Original strand, 520937 - 521016
Alignment:
Q  19 atcaaaccaagcctcgaaccctaattttatgtaaatttattttctaatct-atttcaccgtttttctaatgaaataacaa 97  Q
    |||| ||||||||||||||| |||||||||||||||||| |||||||||| ||||||| |||||| ||||||| ||||||    
T  520937 atcataccaagcctcgaaccttaattttatgtaaatttactttctaatctaatttcactgtttttataatgaattaacaa 521016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 105; Significance: 9e-53; HSPs: 29)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 105; E-Value: 9e-53
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 11869757 - 11869597
Alignment:
Q  1 tctaatgacctaatccctatcaaaccaagcctcgaaccctaattttatgtaaatttattttctaatctatttcaccgtttttctaatgaaataacaagta 100  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||| ||||| ||||||||||||||||||||| ||||| ||||||| |||||| ||    
T  11869757 tctaatgacctaatccctatcaaaccaagcctcgaacccaaattttatataaatctattttctaatctatttcaccttttttataatgaattaacaaata 11869658  T
Q  101 ttaatcgaaggaccgaaaggtgaagtttaatagttgttatttcatcatcacaaatatcaag 161  Q
    |||||| | |||||||| || ||| |||||||||||||| ||||| |||||||||||||||    
T  11869657 ttaatcaatggaccgaacggcgaaatttaatagttgttaattcataatcacaaatatcaag 11869597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 101; E-Value: 2e-50
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 11577667 - 11577508
Alignment:
Q  1 tctaatgacctaatccctatcaaaccaagcctcgaaccctaattttatgtaaatttattttctaatctatttcaccgtttttctaatgaaataacaagta 100  Q
    ||||| ||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||| |||||||||||| ||||  |||||||||||    
T  11577667 tctaacgacctaatccctatcaaaccaagcctcaaaccctaattttatgtaaatctattttctaatctaattcaccgtttttataat-caataacaagta 11577569  T
Q  101 ttaatcgaaggaccgaaaggtgaagtttaatagttgttatttcatcatcacaaatatcaag 161  Q
    ||||| |||||| |||||| ||||| |||||||||||||||   |||||||||||||||||    
T  11577568 ttaattgaaggatcgaaagatgaaggttaatagttgttattgattcatcacaaatatcaag 11577508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 97; E-Value: 6e-48
Query Start/End: Original strand, 1 - 132
Target Start/End: Complemental strand, 27992628 - 27992496
Alignment:
Q  1 tctaatgacctaatccctatcaaaccaagcctcgaaccctaattttatgtaaatttattttctaatct-atttcaccgtttttctaatgaaataacaagt 99  Q
    |||||||||||||| ||||||||||||||||| ||||||||||||||||||||| ||||||||||||| |||||| |||||||| || | ||||||||||    
T  27992628 tctaatgacctaattcctatcaaaccaagcctagaaccctaattttatgtaaatctattttctaatctaatttcatcgtttttccaacggaataacaagt 27992529  T
Q  100 attaatcgaaggaccgaaaggtgaagtttaata 132  Q
    |||||||||||||||||||||||||||||||||    
T  27992528 attaatcgaaggaccgaaaggtgaagtttaata 27992496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 89; E-Value: 3e-43
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 8685763 - 8685663
Alignment:
Q  1 tctaatgacctaatccctatcaaaccaagcctcgaaccctaattttatgtaaatttattttctaatctatttcaccgtttttctaatgaaataacaagta 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||| |||||||||    
T  8685763 tctaatgacctaatccctatcaaaccaagcctcgaaccctaattttatgtaaatctattttctaatctatttcaccgtttttataatgaattaacaagta 8685664  T
Q  101 t 101  Q
    |    
T  8685663 t 8685663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 81; E-Value: 2e-38
Query Start/End: Original strand, 1 - 157
Target Start/End: Original strand, 8532063 - 8532218
Alignment:
Q  1 tctaatgacctaatccctatcaaaccaagcctcgaaccctaattttatgtaaatttattttctaatctatttcaccgtttttctaatgaaataacaagta 100  Q
    ||||||||||||||||  ||||||||||||||||||||| ||||||||||||||  ||||||||||||||||||||||| || ||||  |||||||| ||    
T  8532063 tctaatgacctaatccaaatcaaaccaagcctcgaacccaaattttatgtaaatcgattttctaatctatttcaccgttcttataat-caataacaaata 8532161  T
Q  101 ttaatcgaaggaccgaaaggtgaagtttaatagttgttatttcatcatcacaaatat 157  Q
    |||||||| ||| |||||| |||||||||||| |||||||    |||||||||||||    
T  8532162 ttaatcgatggatcgaaagatgaagtttaataattgttatcgattcatcacaaatat 8532218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 41545685 - 41545594
Alignment:
Q  1 tctaatgacctaatccctatcaaaccaagcctcgaaccctaattttatgtaaatttattttctaatctatttcaccgtttttctaatgaaat 92  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||| |||| ||||    
T  41545685 tctaatgacctaatccctatcaaaccaagcctcgaaccctaattttatgtaaatttattgtctaatctaattcaccgtttttataatcaaat 41545594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 74; E-Value: 3e-34
Query Start/End: Original strand, 68 - 161
Target Start/End: Complemental strand, 9762475 - 9762383
Alignment:
Q  68 tatttcaccgtttttctaatgaaataacaagtattaatcgaaggaccgaaaggtgaagtttaatagttgttatttcatcatcacaaatatcaag 161  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||| |||||||||| ||||||||||||||    
T  9762475 tatttcaccgtttttctaatgaaataacaagtattaatcgaagaaccgaaatgtgaagtttaatagtt-ttatttcatcctcacaaatatcaag 9762383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 74; E-Value: 3e-34
Query Start/End: Original strand, 68 - 161
Target Start/End: Complemental strand, 9774930 - 9774838
Alignment:
Q  68 tatttcaccgtttttctaatgaaataacaagtattaatcgaaggaccgaaaggtgaagtttaatagttgttatttcatcatcacaaatatcaag 161  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||| ||||||||||||||    
T  9774930 tatttcaccgtttttcaaatgaaataacaagtattaatcgaaggaccgaaatgtgaagtttaatagtt-ttatttcatcctcacaaatatcaag 9774838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 74; E-Value: 3e-34
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 17023422 - 17023523
Alignment:
Q  1 tctaatgacctaatccctatcaaaccaagcctcgaaccctaattttatgtaaatttattttctaatct-atttcaccgtttttctaatgaaataacaagt 99  Q
    ||||||||||||||||  |||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||| ||||||| ||||||||    
T  17023422 tctaatgacctaatcctaatcaaaccaagcctcgaaccctaattttatgtaaatctattttctaatctaatttcaccgtttttataatgaattaacaagt 17023521  T
Q  100 at 101  Q
    ||    
T  17023522 at 17023523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 73; E-Value: 1e-33
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 17774964 - 17775064
Alignment:
Q  1 tctaatgacctaatccctatcaaaccaagcctcgaaccctaattttatgtaaatttattttctaatctatttcaccgtttttctaatgaaataacaagta 100  Q
    ||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||  |||||| |||||| ||||||| |||||||||    
T  17774964 tctaatgacctaatccccatcaaagcaagcctcgaaccctaattttatgtaaatttattttctaatcagtttcactgtttttataatgaattaacaagta 17775063  T
Q  101 t 101  Q
    |    
T  17775064 t 17775064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 73; E-Value: 1e-33
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 19076265 - 19076365
Alignment:
Q  1 tctaatgacctaatccctatcaaaccaagcctcgaaccctaattttatgtaaatttattttctaatctatttcaccgtttttctaatgaaataacaagta 100  Q
    ||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||  |||||| |||||| ||||||| |||||||||    
T  19076265 tctaatgacctaatccccatcaaagcaagcctcgaaccctaattttatgtaaatttattttctaatcagtttcactgtttttataatgaattaacaagta 19076364  T
Q  101 t 101  Q
    |    
T  19076365 t 19076365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 70; E-Value: 7e-32
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 13069942 - 13070043
Alignment:
Q  1 tctaatgacctaatccctatcaaaccaagcctcgaaccctaattttatgtaaatttattttctaatct-atttcaccgtttttctaatgaaataacaagt 99  Q
    |||||||||||||||||||||||| |||  |||||||||||||||||||||||| ||||||||||||| |||||||||||||| ||||||| ||||||||    
T  13069942 tctaatgacctaatccctatcaaaacaacactcgaaccctaattttatgtaaatctattttctaatctaatttcaccgtttttataatgaattaacaagt 13070041  T
Q  100 at 101  Q
    ||    
T  13070042 at 13070043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 70; E-Value: 7e-32
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 22039014 - 22039111
Alignment:
Q  1 tctaatgacctaatccctatcaaaccaagcctcgaaccctaattttatgtaaatttattttctaatct-atttcaccgtttttctaatgaaataacaa 97  Q
    ||||||||||||||||  |||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||| ||||||| ||||||    
T  22039014 tctaatgacctaatcctaatcaaaccaagcctcgaaccctaattttatgtaaatctattttctaatctaatttcaccgtttttataatgaattaacaa 22039111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 67; E-Value: 4e-30
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 42244468 - 42244378
Alignment:
Q  1 tctaatgacctaatccctatcaaaccaagcctcgaaccctaattttatgtaaatttattttctaatct-atttcaccgtttttctaatgaa 90  Q
    ||||||||||||||||  ||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||| |||||||    
T  42244468 tctaatgacctaatcctgatcaaaccaagcctcgaaccctaattttatgtaaatttaatttctaatctaatttcaccgtttttataatgaa 42244378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 64; E-Value: 3e-28
Query Start/End: Original strand, 1 - 160
Target Start/End: Complemental strand, 11827329 - 11827171
Alignment:
Q  1 tctaatgacctaatccctatcaaaccaagcctcgaaccctaattttatgtaaatttattttctaatctatttcaccgtttttctaatgaaataacaagta 100  Q
    ||||||||| ||||||  |||||||||||| |  |||||||||||||||||| | |   |||||||||||||||| ||| || |||| || |||||| ||    
T  11827329 tctaatgacgtaatcctaatcaaaccaagctttaaaccctaattttatgtaactcttcgttctaatctatttcactgttcttataatcaa-taacaaata 11827231  T
Q  101 ttaatcgaaggaccgaaaggtgaagtttaatagttgttatttcatcatcacaaatatcaa 160  Q
    |||||||| ||| |||||| |||||||||||||||||||||   ||||||||||||||||    
T  11827230 ttaatcgatggatcgaaagatgaagtttaatagttgttattgattcatcacaaatatcaa 11827171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 20225150 - 20225049
Alignment:
Q  1 tctaatgacctaatccctatcaaaccaagcctcgaaccctaattttatgtaaatttattttctaatct-atttcaccgtttttctaatgaaataacaagt 99  Q
    ||||||||| ||||||  |||||||||||||||||||||||||| ||||||||| ||||||||||||| | |||||||||||| || |||| ||||||||    
T  20225150 tctaatgacttaatcctaatcaaaccaagcctcgaaccctaattctatgtaaatctattttctaatctaaattcaccgtttttatagtgaattaacaagt 20225051  T
Q  100 at 101  Q
    ||    
T  20225050 at 20225049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 52; E-Value: 4e-21
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 17577115 - 17577036
Alignment:
Q  1 tctaatgacctaatccctatcaaaccaagcctcgaaccctaattttatgtaaatttattttctaatct-atttcaccgtt 79  Q
    ||||||||||||||||||||||||||||||||  ||| | |||||||||||||| ||||||||||||| |||||||||||    
T  17577115 tctaatgacctaatccctatcaaaccaagcctaaaactcaaattttatgtaaatctattttctaatctaatttcaccgtt 17577036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 50; E-Value: 6e-20
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 13418557 - 13418658
Alignment:
Q  1 tctaatgacctaatccctatcaaaccaagcctcgaaccctaattttatgtaaatttattttctaatct-atttcaccgtttttctaatgaaataacaagt 99  Q
    ||||||||||||||||  ||||||||||| |||||||||||||||||| ||||| || |||||||||| |||||| ||||| | ||||||| ||| ||||    
T  13418557 tctaatgacctaatcctaatcaaaccaaggctcgaaccctaattttatataaatatactttctaatctaatttcatcgtttatataatgaattaaaaagt 13418656  T
Q  100 at 101  Q
    ||    
T  13418657 at 13418658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 45; E-Value: 6e-17
Query Start/End: Original strand, 1 - 141
Target Start/End: Original strand, 27407386 - 27407524
Alignment:
Q  1 tctaatgacctaatccctatcaaaccaagcctcgaaccctaattttatgtaaatttattttctaatctatttcaccgtttttctaatgaaataacaagta 100  Q
    ||||||||| ||||||  |||||||||||| |  ||||||||||||||||||   ||  ||||||| |||||||||||| || ||||  |||||||| ||    
T  27407386 tctaatgacgtaatcctaatcaaaccaagctttaaaccctaattttatgtaaccctaaattctaatttatttcaccgttcttataat-caataacaaata 27407484  T
Q  101 ttaatcgaaggaccgaaaggtgaagtttaatagttgttatt 141  Q
    |||||||| |||  ||||| ||| |||||||||||||||||    
T  27407485 ttaatcgatgga-tgaaagatgatgtttaatagttgttatt 27407524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 42; E-Value: 0.000000000000004
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 7908693 - 7908789
Alignment:
Q  1 tctaatgacctaatccctatcaaaccaagcctcgaaccctaattttatgtaaatttattttctaatcta-tttcaccgtttttctaatgaaataacaa 97  Q
    ||||||| |||| |||  ||||||||||||||| |||||||||||||| ||||| || ||||||||||| ||||||| ||||| ||||||| ||||||    
T  7908693 tctaatggcctattcctaatcaaaccaagcctcaaaccctaattttatataaatctactttctaatctagtttcacc-tttttttaatgaattaacaa 7908789  T

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Target: chr3; HSP #21
Raw Score: 42; E-Value: 0.000000000000004
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 12697384 - 12697319
Alignment:
Q  1 tctaatgacctaatccctatcaaaccaagcctcgaaccctaattttatgtaaatttattttctaat 66  Q
    |||||||||||||| ||||||||| ||||| |  |||||||||||||||||||| |||||||||||    
T  12697384 tctaatgacctaattcctatcaaatcaagcatataaccctaattttatgtaaatctattttctaat 12697319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 42; E-Value: 0.000000000000004
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 17209754 - 17209851
Alignment:
Q  1 tctaatgacctaatccctatcaaaccaagcctcgaaccctaattttatgtaaatttattttctaatct-atttcaccgtttttctaatgaaataacaa 97  Q
    ||||||||| ||||||  |||||||||| ||   |||||||||||||| ||||| || |||||||||| |||||||||||||| ||||||| ||||||    
T  17209754 tctaatgacgtaatcctaatcaaaccaaaccataaaccctaattttatataaatctactttctaatctaatttcaccgtttttataatgaattaacaa 17209851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 40; E-Value: 0.00000000000006
Query Start/End: Original strand, 98 - 157
Target Start/End: Original strand, 40846744 - 40846803
Alignment:
Q  98 gtattaatcgaaggaccgaaaggtgaagtttaatagttgttatttcatcatcacaaatat 157  Q
    ||||||||||||||| |||||| |||||||||||||||||||||   |||||||||||||    
T  40846744 gtattaatcgaaggatcgaaagatgaagtttaatagttgttattgattcatcacaaatat 40846803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.00000000006
Query Start/End: Original strand, 90 - 160
Target Start/End: Complemental strand, 16998994 - 16998924
Alignment:
Q  90 aataacaagtattaatcgaaggaccgaaaggtgaagtttaatagttgttatttcatcatcacaaatatcaa 160  Q
    ||||||||||||||| ||||| ||||||  | ||||||||||||| |||| ||| ||||| ||||||||||    
T  16998994 aataacaagtattaaacgaagtaccgaacagagaagtttaatagtcgttacttcgtcatctcaaatatcaa 16998924  T

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Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.0000000009
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 17050903 - 17050999
Alignment:
Q  1 tctaatgacctaatccctatcaaaccaagcctcgaaccctaattttatgtaaatttattttctaatct-atttcaccgtttttctaatgaaataaca 96  Q
    ||||||||| ||||||  |||||||||||||   |||| ||||||||| |||||  | |||||||||| ||||||||||| || ||||||| |||||    
T  17050903 tctaatgacataatcctaatcaaaccaagccataaaccttaattttatataaatcaactttctaatctaatttcaccgttgttataatgaattaaca 17050999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 10850638 - 10850548
Alignment:
Q  1 tctaatgacctaatccctatcaaaccaagcctcgaaccctaattttatgtaaatttattttctaatcta-tttcaccgtttttctaatgaa 90  Q
    ||||||||| ||||||  |||||||||| ||   ||||||| |||||| ||||| || |||||||| || ||||||||||||| |||||||    
T  10850638 tctaatgacataatcctaatcaaaccaaaccataaaccctagttttatataaatctactttctaatttaatttcaccgtttttataatgaa 10850548  T

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Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 17041890 - 17041980
Alignment:
Q  1 tctaatgacctaatccctatcaaaccaagcctcgaaccctaattttatgtaaatttattttctaatct-atttcaccgtttttctaatgaa 90  Q
    ||||||||| ||||||  |||||||||||||   |||  ||||||||| ||||| || |||||||||| ||||||| |||||| |||||||    
T  17041890 tctaatgacataatcctaatcaaaccaagccagaaacattaattttatataaatctactttctaatctaatttcactgtttttataatgaa 17041980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 11399050 - 11399118
Alignment:
Q  1 tctaatgacctaatccctatcaaaccaagcctcgaaccctaattttatgtaaatttattttctaatcta 69  Q
    ||||||||| ||||||  ||||||||||||||  ||||||||| ||||||||   || |||||||||||    
T  11399050 tctaatgacataatcctaatcaaaccaagccttaaaccctaatcttatgtaaccctagtttctaatcta 11399118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 25055188 - 25055256
Alignment:
Q  1 tctaatgacctaatccctatcaaaccaagcctcgaaccctaattttatgtaaatttattttctaatcta 69  Q
    ||||||||| ||||||  ||||||||||||||  ||||||||| ||||||||   || |||||||||||    
T  25055188 tctaatgacataatcctaatcaaaccaagccttaaaccctaatcttatgtaaccctagtttctaatcta 25055256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 86; Significance: 2e-41; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 86; E-Value: 2e-41
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 14262 - 14423
Alignment:
Q  1 tctaatgacctaatccctatcaaaccaagcctcgaaccctaattttatgtaaatttattttctaatctatttcaccgtttttctaatgaaataacaagta 100  Q
    ||||||||||||||||||||| |||||||||||||||||||| ||||||||||| |||||||||||||||| |||||||||| ||||||| |||||||||    
T  14262 tctaatgacctaatccctatcgaaccaagcctcgaaccctaaatttatgtaaatctattttctaatctattccaccgtttttataatgaattaacaagta 14361  T
Q  101 tt-aatcgaaggaccgaaaggtgaagtttaatagttgttatttcatcatcacaaatatcaag 161  Q
    || |||| |   | ||||||| || | || |||||||||| ||||| |||||||||||||||    
T  14362 ttaaatcaataaatcgaaaggcgagggttgatagttgttaattcataatcacaaatatcaag 14423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074 (Bit Score: 86; Significance: 2e-41; HSPs: 2)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 86; E-Value: 2e-41
Query Start/End: Original strand, 8 - 161
Target Start/End: Complemental strand, 22647 - 22495
Alignment:
Q  8 acctaatccctatcaaaccaagcctcgaaccctaattttatgtaaatttattttctaatctatttcaccgtttttctaatgaaataacaagtattaatcg 107  Q
    |||||| ||||||||||||||| |||||||||| ||||||||||||| ||||||||||||||||||||||||||| |||| ||| |||||||||||| |     
T  22647 acctaacccctatcaaaccaagtctcgaaccctgattttatgtaaatctattttctaatctatttcaccgtttttataat-aaaaaacaagtattaaaca 22549  T
Q  108 aaggaccgaaaggtgaagtttaatagttgttatttcatcatcacaaatatcaag 161  Q
    |  |||||||||  |||||||||||||||||| ||| | |||||||||||||||    
T  22548 attgaccgaaagacgaagtttaatagttgttaattcttaatcacaaatatcaag 22495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074; HSP #2
Raw Score: 52; E-Value: 4e-21
Query Start/End: Original strand, 19 - 101
Target Start/End: Complemental strand, 54142 - 54059
Alignment:
Q  19 atcaaaccaagcctcgaaccctaattttatgtaaatttattttctaatct-atttcaccgtttttctaatgaaataacaagtat 101  Q
    ||||||| |||||||||||||||||||||||||||| || |||||||||| |||||||||||||| |||| || ||||||||||    
T  54142 atcaaacaaagcctcgaaccctaattttatgtaaatctactttctaatctaatttcaccgtttttataataaattaacaagtat 54059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1559 (Bit Score: 66; Significance: 2e-29; HSPs: 1)
Name: scaffold1559
Description:

Target: scaffold1559; HSP #1
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 1572 - 1645
Alignment:
Q  1 tctaatgacctaatccctatcaaaccaagcctcgaaccctaattttatgtaaatttattttctaatctatttca 74  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||    
T  1572 tctaatgacctaatccctatcaaaccaagcctcgaacccttattttatgtaaatctattttctaatctatttca 1645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0213 (Bit Score: 61; Significance: 2e-26; HSPs: 1)
Name: scaffold0213
Description:

Target: scaffold0213; HSP #1
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 141
Target Start/End: Original strand, 21768 - 21907
Alignment:
Q  1 tctaatgacctaatccctatcaaaccaagcctcgaaccctaattttatgtaaatttattttctaatctatttcaccgtttttctaatgaaataacaagta 100  Q
    ||||||||| ||||||  ||||||||||||||||||||| |||||||||||||| ||||||||||||||||||| |||| ||  ||   |||||||| ||    
T  21768 tctaatgacataatcctaatcaaaccaagcctcgaaccccaattttatgtaaatatattttctaatctatttcatcgttctt-aaaaccaataacaaata 21866  T
Q  101 ttaatcgaaggaccgaaaggtgaagtttaatagttgttatt 141  Q
    |||||||| | | |||||| | |||||||||| ||||||||    
T  21867 ttaatcgatgaatcgaaagataaagtttaatacttgttatt 21907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088 (Bit Score: 54; Significance: 3e-22; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 141
Target Start/End: Original strand, 38707 - 38847
Alignment:
Q  1 tctaatgacctaatccctatcaaaccaagcctcgaaccctaattttatgtaaatttattttctaatc-tatttcaccgtttttctaatgaaataacaagt 99  Q
    |||||||||||||||    ||||||||||||| |||||||||||||||||||   ||||||||||||  || |||| ||| || ||||  ||||||||||    
T  38707 tctaatgacctaatcatattcaaaccaagcctagaaccctaattttatgtaaccctattttctaatcaaatctcactgttcttataat-caataacaagt 38805  T
Q  100 attaatcgaaggaccgaaaggtgaagtttaatagttgttatt 141  Q
     |||| ||||||| |||||| |||||||||||||||||||||    
T  38806 gttaaacgaaggatcgaaagatgaagtttaatagttgttatt 38847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 50; Significance: 6e-20; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 50; E-Value: 6e-20
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 172909 - 173010
Alignment:
Q  1 tctaatgacctaatccctatcaaaccaagcctcgaaccctaattttatgtaaatttattttctaatct-atttcaccgtttttctaatgaaataacaagt 99  Q
    |||||||||||||| |  ||||||||| |||||||||||||| ||||| ||||| || |||||||||| |||||||||||||  ||||||| ||||||||    
T  172909 tctaatgacctaattctaatcaaaccatgcctcgaaccctaaatttatataaatctactttctaatctaatttcaccgttttcataatgaattaacaagt 173008  T
Q  100 at 101  Q
    ||    
T  173009 at 173010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0264 (Bit Score: 42; Significance: 0.000000000000004; HSPs: 1)
Name: scaffold0264
Description:

Target: scaffold0264; HSP #1
Raw Score: 42; E-Value: 0.000000000000004
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 22342 - 22245
Alignment:
Q  1 tctaatgacctaatccctatcaaaccaagcctcgaaccctaattttatgtaaatttattttctaatct-atttcaccgtttttctaatgaaataacaa 97  Q
    ||||||||| ||||||  |||||||||| ||   |||||||||||||| ||||| || |||||||||| |||||||||||||| ||||||| ||||||    
T  22342 tctaatgacgtaatcctaatcaaaccaaaccataaaccctaattttatataaatctactttctaatctaatttcaccgtttttataatgaattaacaa 22245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1092 (Bit Score: 33; Significance: 0.0000000009; HSPs: 1)
Name: scaffold1092
Description:

Target: scaffold1092; HSP #1
Raw Score: 33; E-Value: 0.0000000009
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 1600 - 1532
Alignment:
Q  1 tctaatgacctaatccctatcaaaccaagcctcgaaccctaattttatgtaaatttattttctaatcta 69  Q
    ||||||||| ||||||  ||||||||||||||  ||||||||||||||||||   || |||||||||||    
T  1600 tctaatgacataatcctaatcaaaccaagccttaaaccctaattttatgtaaccctaatttctaatcta 1532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1058 (Bit Score: 33; Significance: 0.0000000009; HSPs: 1)
Name: scaffold1058
Description:

Target: scaffold1058; HSP #1
Raw Score: 33; E-Value: 0.0000000009
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 2977 - 2909
Alignment:
Q  1 tctaatgacctaatccctatcaaaccaagcctcgaaccctaattttatgtaaatttattttctaatcta 69  Q
    ||||||||| ||||||  ||||||||||||||  ||||||||||||||||||   || |||||||||||    
T  2977 tctaatgacataatcctaatcaaaccaagccttaaaccctaattttatgtaaccctaatttctaatcta 2909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0713 (Bit Score: 33; Significance: 0.0000000009; HSPs: 1)
Name: scaffold0713
Description:

Target: scaffold0713; HSP #1
Raw Score: 33; E-Value: 0.0000000009
Query Start/End: Original strand, 2 - 97
Target Start/End: Complemental strand, 6623 - 6527
Alignment:
Q  2 ctaatgacctaatccctatcaaaccaagcctcgaaccctaattttatgtaaatttattttctaatct-atttcaccgtttttctaatgaaataacaa 97  Q
    |||||||| ||||||  |||||||||| ||   |||||||||||||| |||||  | |||||||||| |||||||||||||  ||||||| ||||||    
T  6623 ctaatgacgtaatcctaatcaaaccaaaccataaaccctaattttatataaatccactttctaatctaatttcaccgttttgataatgaattaacaa 6527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0094 (Bit Score: 33; Significance: 0.0000000009; HSPs: 1)
Name: scaffold0094
Description:

Target: scaffold0094; HSP #1
Raw Score: 33; E-Value: 0.0000000009
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 1820 - 1880
Alignment:
Q  1 tctaatgacctaatccctatcaaaccaagcctcgaaccctaattttatgtaaatttatttt 61  Q
    ||||||||||||||||   |||||||||||||   ||||||||||||||||||| ||||||    
T  1820 tctaatgacctaatcctattcaaaccaagcctatgaccctaattttatgtaaatctatttt 1880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0362 (Bit Score: 30; Significance: 0.00000005; HSPs: 1)
Name: scaffold0362
Description:

Target: scaffold0362; HSP #1
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 9139 - 9042
Alignment:
Q  1 tctaatgacctaatccctatcaaaccaagcctcgaaccctaattttatgtaaatttattttctaatct-atttcaccgtttttctaatgaaataacaa 97  Q
    ||||||||| ||||||  |||||||||| ||   ||| |||||||||| ||||| || |||||||||| | ||||| |||||| ||||||| ||||||    
T  9139 tctaatgacgtaatcctaatcaaaccaaaccataaactctaattttatataaatctactttctaatctaaattcactgtttttataatgaattaacaa 9042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0278 (Bit Score: 30; Significance: 0.00000005; HSPs: 1)
Name: scaffold0278
Description:

Target: scaffold0278; HSP #1
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 12461 - 12380
Alignment:
Q  1 tctaatgacctaatccctatcaaaccaagcctcgaaccctaattttatgtaaatttattttctaatct-atttcaccgtttt 81  Q
    ||||||||| ||||||  ||||||||||||||  ||||||||| ||||||||   || |||||||||| | |||||||||||    
T  12461 tctaatgacataatcctaatcaaaccaagccttaaaccctaatcttatgtaaccctagtttctaatctaaattcaccgtttt 12380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 30; Significance: 0.00000005; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 77999 - 78080
Alignment:
Q  1 tctaatgacctaatccctatcaaaccaagcctcgaaccctaattttatgtaaatttattttctaatct-atttcaccgtttt 81  Q
    ||||||||| ||||||  |||||||||||| |  ||||||||||||||||||   || |||||||||| | |||||||||||    
T  77999 tctaatgacataatcctaatcaaaccaagctttaaaccctaattttatgtaaccctaatttctaatctgaattcaccgtttt 78080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0197 (Bit Score: 29; Significance: 0.0000002; HSPs: 1)
Name: scaffold0197
Description:

Target: scaffold0197; HSP #1
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 8745 - 8677
Alignment:
Q  1 tctaatgacctaatccctatcaaaccaagcctcgaaccctaattttatgtaaatttattttctaatcta 69  Q
    ||||||||| ||||||  ||||||||||| ||  ||||||||||||||||||   || |||||||||||    
T  8745 tctaatgacataatcctaatcaaaccaagtcttaaaccctaattttatgtaaccatagtttctaatcta 8677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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