View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF4299-Insertion-9 (Length: 275)
Name: NF4299-Insertion-9
Description: NF4299
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4299-Insertion-9 |
 | |
|
| [»] scaffold0312 (1 HSPs) |
| | |
|
| [»] scaffold0608 (1 HSPs) |
| | |
|
Alignment Details
Target: chr4 (Bit Score: 205; Significance: 1e-112; HSPs: 2)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 1 - 256
Target Start/End: Complemental strand, 2464966 - 2464712
Alignment:
| Q |
1 |
atttcaggtcatgaccggcgcacaggctaacactaactcatgatatatttagcctggcaagcctaataaactataagacttacttacacctttctaaaat |
100 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
2464966 |
attttaggtcatgaccggcgcacaggctaacactaactcatgatatatttagcctggcaagcctaataaactataacacttacttacacctttctaaaat |
2464867 |
T |
|
| Q |
101 |
actaaaattttggtaatgactcacaagctttcaggacatttcaagatgcaagtttatcatcacaaaaaatntaaaaacctatctcattatttatatatat |
200 |
Q |
| |
|
|||||||||||||||||||||| |||||||||||||||||||||||||||||| ||| |||||||| || | ||||||||||||||||||||||||||| |
|
|
| T |
2464866 |
actaaaattttggtaatgactcgcaagctttcaggacatttcaagatgcaagtatattatcacaaagtatat-aaaacctatctcattatttatatatat |
2464768 |
T |
|
| Q |
201 |
agactttaaagagaagaacagccattatctcaatagttacaccataagaaaatcac |
256 |
Q |
| |
|
|||||||||||||||||||| |||||||||||||||||||| |||||| ||||||| |
|
|
| T |
2464767 |
agactttaaagagaagaacaaccattatctcaatagttacatcataagtaaatcac |
2464712 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 1 - 248
Target Start/End: Original strand, 6736155 - 6736397
Alignment:
| Q |
1 |
atttcaggtcatgaccggcgcacaggctaacactaactcatgatatatttagcctggcaagcctaataaactataagacttacttacacctttctaaaat |
100 |
Q |
| |
|
|||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
6736155 |
atttcaagtcatgaccggcgcacaggctaacactaactcatgatatatttagcctagcaagcctaataaactataa----cacttacacctttctaaaat |
6736250 |
T |
|
| Q |
101 |
actaaaattttggtaatgactcacaagctttcaggacatttcaagatgcaagtttatcatcacaaaaaatntaaaaacctatctcattatttatatatat |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||||| |||||||| |||| ||||||||| ||||||||| || | ||||||||||||| ||||||||||||| |
|
|
| T |
6736251 |
actaaaattttggtaatgactcacaagctttcacgacatttcgagatacaagtttattatcacaaaatatat-aaaacctatctcactatttatatatat |
6736349 |
T |
|
| Q |
201 |
agactttaaagagaagaacagccattatctcaatagttacaccataag |
248 |
Q |
| |
|
|||||||||||||||||||| | |||||||||||||||||| |||||| |
|
|
| T |
6736350 |
agactttaaagagaagaacaactattatctcaatagttacatcataag |
6736397 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0312 (Bit Score: 141; Significance: 5e-74; HSPs: 1)
Name: scaffold0312
Description:
Target: scaffold0312; HSP #1
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 1 - 256
Target Start/End: Complemental strand, 19479 - 19231
Alignment:
| Q |
1 |
atttcaggtcatgaccggcgcacaggctaacactaactcatgatatatttagcctggcaagcctaataaactataagacttacttacacctttctaaaat |
100 |
Q |
| |
|
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||| | || |||||||||| |
|
|
| T |
19479 |
atttcaggccatgaccggcgcacaggctaacactaactcatgatatatttagcctgacaagcctaataaactataacacttgc----acgtttctaaaat |
19384 |
T |
|
| Q |
101 |
actaaaattttggtaatgactcacaagctttcaggacatttcaagatgcaagtttatcatcacaaaaaatntaaaaacctatctcattatttatatatat |
200 |
Q |
| |
|
||| |||||||||||||||||||||| |||||||||||||||| || ||||||||| |||||||| || | |||| ||||||||||||| ||||||| |
|
|
| T |
19383 |
actgaaattttggtaatgactcacaaaatttcaggacatttcaaaatacaagtttattatcacaaagtatat-aaaatctatctcattatt--tatatat |
19287 |
T |
|
| Q |
201 |
agactttaaagagaagaacagccattatctcaatagttacaccataagaaaatcac |
256 |
Q |
| |
|
|||||||||||| ||||||| ||||||||||||||||||| |||||| ||||||| |
|
|
| T |
19286 |
agactttaaagaaaagaacattcattatctcaatagttacatcataagtaaatcac |
19231 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 141; Significance: 5e-74; HSPs: 2)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 1 - 256
Target Start/End: Original strand, 411091 - 411339
Alignment:
| Q |
1 |
atttcaggtcatgaccggcgcacaggctaacactaactcatgatatatttagcctggcaagcctaataaactataagacttacttacacctttctaaaat |
100 |
Q |
| |
|
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||| | || |||||||||| |
|
|
| T |
411091 |
atttcaggccatgaccggcgcacaggctaacactaactcatgatatatttagcctgacaagcctaataaactataacacttgc----acgtttctaaaat |
411186 |
T |
|
| Q |
101 |
actaaaattttggtaatgactcacaagctttcaggacatttcaagatgcaagtttatcatcacaaaaaatntaaaaacctatctcattatttatatatat |
200 |
Q |
| |
|
||| |||||||||||||||||||||| |||||||||||||||| || ||||||||| |||||||| || | |||| ||||||||||||| ||||||| |
|
|
| T |
411187 |
actgaaattttggtaatgactcacaaaatttcaggacatttcaaaatacaagtttattatcacaaagtatat-aaaatctatctcattatt--tatatat |
411283 |
T |
|
| Q |
201 |
agactttaaagagaagaacagccattatctcaatagttacaccataagaaaatcac |
256 |
Q |
| |
|
|||||||||||| ||||||| ||||||||||||||||||| |||||| ||||||| |
|
|
| T |
411284 |
agactttaaagaaaagaacattcattatctcaatagttacatcataagtaaatcac |
411339 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 8 - 125
Target Start/End: Complemental strand, 11109943 - 11109830
Alignment:
| Q |
8 |
gtcatgaccggcgcacaggctaacactaactcatgatatatttagcctggcaagcctaataaactataagacttacttacacctttctaaaatactaaaa |
107 |
Q |
| |
|
||||||||||||| |||||||||||| ||||||||| | || ||| || ||||||||| ||||||||| ||||||||||||| |||||| | ||| |
|
|
| T |
11109943 |
gtcatgaccggcgtacaggctaacacaaactcatgaaaaatatagtctagcaagcctaggaaactataa----cacttacacctttccaaaataatgaaa |
11109848 |
T |
|
| Q |
108 |
ttttggtaatgactcaca |
125 |
Q |
| |
|
|||| ||||||||||||| |
|
|
| T |
11109847 |
tttttgtaatgactcaca |
11109830 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 125; Significance: 2e-64; HSPs: 6)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 1 - 166
Target Start/End: Complemental strand, 2744430 - 2744269
Alignment:
| Q |
1 |
atttcaggtcatgaccggcgcacaggctaacactaactcatgatatatttagcctggcaagcctaataaactataagacttacttacacctttctaaaat |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
2744430 |
atttcaggtcatgaccggcgcacaggctaacactaactcatgatatatttagcctggcaagcctaataaactataa----cacttacacctttctaaaat |
2744335 |
T |
|
| Q |
101 |
actaaaattttggtaatgactcacaagctttcaggacatttcaagatgcaagtttatcatcacaaa |
166 |
Q |
| |
|
||||||||||||||||||||||| ||||||||| ||||||| ||||| ||||||||| |||||||| |
|
|
| T |
2744334 |
actaaaattttggtaatgactcataagctttcacgacatttaaagatacaagtttattatcacaaa |
2744269 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 10 - 166
Target Start/End: Complemental strand, 28173971 - 28173819
Alignment:
| Q |
10 |
catgaccggcgcacaggctaacactaactcatgatatatttagcctggcaagcctaataaactataagacttacttacacctttctaaaatactaaaatt |
109 |
Q |
| |
|
||||||| | ||||||||||||| ||||||||||| |||||||| ||||||||||||||||||||| |||||||||||| | |||||| ||||| |
|
|
| T |
28173971 |
catgaccagtgcacaggctaacaacaactcatgataaatttagcccggcaagcctaataaactataa----cacttacaccttttttaaataccgaaatt |
28173876 |
T |
|
| Q |
110 |
ttggtaatgactcacaagctttcaggacatttcaagatgcaagtttatcatcacaaa |
166 |
Q |
| |
|
||||||||||||||||| |||||| |||||||||| |||||||||||| |||||||| |
|
|
| T |
28173875 |
ttggtaatgactcacaaactttcaagacatttcaaaatgcaagtttattatcacaaa |
28173819 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 82 - 247
Target Start/End: Complemental strand, 28173797 - 28173635
Alignment:
| Q |
82 |
acttacacctttctaaaatactaaaattttggtaatgactcacaagctttcaggacatttcaagatgcaagtttatcatcacaaaaaatntaaaaaccta |
181 |
Q |
| |
|
||||| ||||||||||||||| ||||||||||||||||||||||| ||| || |||||||||| |||||| ||||| |||||||| || | |||| || |
|
|
| T |
28173797 |
acttaaacctttctaaaataccaaaattttggtaatgactcacaaacttccaagacatttcaaaatgcaaatttattatcacaaagtatat-aaaattta |
28173699 |
T |
|
| Q |
182 |
tctcattatttatatatatagactttaaagagaagaacagccattatctcaatagttacaccataa |
247 |
Q |
| |
|
|||||||||| |||||||||||||||| || ||||||| | |||||||||||||||||| ||||| |
|
|
| T |
28173698 |
tctcattatt--tatatatagactttaatgaaaagaacaactattatctcaatagttacatcataa |
28173635 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 4 - 144
Target Start/End: Complemental strand, 45682481 - 45682345
Alignment:
| Q |
4 |
tcaggtcatgaccggcgcacaggctaacactaactcatgatatatttagcctggcaagcctaataaactataagacttacttacacctttctaaaatact |
103 |
Q |
| |
|
||||||||||||||||| |||||||||||||||||||||||| ||||| ||||||||||||| ||||||| || | ||| |||||||||||||||| |
|
|
| T |
45682481 |
tcaggtcatgaccggcgtacaggctaacactaactcatgataaatttaacctggcaagcctagtaaactacaa----caattagacctttctaaaatact |
45682386 |
T |
|
| Q |
104 |
aaaattttggtaatgactcacaagctttcaggacatttcaa |
144 |
Q |
| |
|
||||||||||||| |||||||| ||| ||| ||||||||| |
|
|
| T |
45682385 |
aaaattttggtaacgactcacacacttccagaacatttcaa |
45682345 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 11952113 - 11951996
Alignment:
| Q |
1 |
atttcaggtcatgaccggcgcacaggctaacactaactcatgatatatttagcctggcaagcctaataaactataagacttacttacacctttctaaaat |
100 |
Q |
| |
|
|||||||| ||||| | ||||| ||||||| |||||||||| |||||| ||||||||||||||||||||||||||| ||||| |||| ||| ||||| |
|
|
| T |
11952113 |
atttcaggccatgatccgcgcataggctaatactaactcataatatatatagcctggcaagcctaataaactataacactta--taca--ttttcaaaat |
11952018 |
T |
|
| Q |
101 |
actaaaattttggtaatgactc |
122 |
Q |
| |
|
| | |||||||||||||||||| |
|
|
| T |
11952017 |
attgaaattttggtaatgactc |
11951996 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 151 - 255
Target Start/End: Complemental strand, 11951983 - 11951884
Alignment:
| Q |
151 |
agtttatcatcacaaaaaatntaaaaacctatctcattatttatatatatagactttaaagagaagaacagccattatctcaatagttacaccataagaa |
250 |
Q |
| |
|
||||||| |||||||| || ||||| |||||||||||||||||||| ||||||||| ||| ||||| |||||||||||||||||| |||||| | |
|
|
| T |
11951983 |
agtttattatcacaaagtatataaaa--ctatctcattatttatatatg--gactttaaa-agaggaacatttattatctcaatagttacatcataagta |
11951889 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 121; Significance: 5e-62; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 1 - 166
Target Start/End: Complemental strand, 29935546 - 29935385
Alignment:
| Q |
1 |
atttcaggtcatgaccggcgcacaggctaacactaactcatgatatatttagcctggcaagcctaataaactataagacttacttacacctttctaaaat |
100 |
Q |
| |
|
|||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
29935546 |
atttcaggtcatgaccggcgcataggctaacactaactcatgatatatttagcctggcaagcctaataaactataa----cacttacacctttctaaaat |
29935451 |
T |
|
| Q |
101 |
actaaaattttggtaatgactcacaagctttcaggacatttcaagatgcaagtttatcatcacaaa |
166 |
Q |
| |
|
||||||||||||||||||||||| ||||||||| ||||||| ||||| ||||||||| |||||||| |
|
|
| T |
29935450 |
actaaaattttggtaatgactcaaaagctttcacgacatttaaagatacaagtttattatcacaaa |
29935385 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 109; Significance: 7e-55; HSPs: 3)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 10 - 256
Target Start/End: Original strand, 29896333 - 29896570
Alignment:
| Q |
10 |
catgaccggcgcacaggctaacactaactcatgatatatttagcctggcaagcctaataaactataagacttacttacacctttctaaaatactaaaatt |
109 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||| ||| || ||||||||||||||||| ||||| |
|
|
| T |
29896333 |
catgaccggcgcacaggctaacactaactcatgataaatttagcctggcaagcctagtaaactataa--ctt--ttgcacctttctaaaatactgaaatt |
29896428 |
T |
|
| Q |
110 |
ttggtaatgactcacaagctttcaggacatttcaagatgcaagtttatcatcacaaaaaatntaaaaacctatctcattatttatatatatagactttaa |
209 |
Q |
| |
|
||||||||||||||||| | | || ||||||||| ||||||||||||||||||| | | |||| ||||| ||||||| ||||| | |||||||| |
|
|
| T |
29896429 |
ttggtaatgactcacaaacctccataacatttcaaaatgcaagtttatcatcacagta---tttaaaatctatcccattatt--tatatgttgactttaa |
29896523 |
T |
|
| Q |
210 |
agagaagaacagccattatctcaatagttacaccataagaaaatcac |
256 |
Q |
| |
|
||| ||||||| | |||||||||||||||||| |||||| ||||||| |
|
|
| T |
29896524 |
agacaagaacaactattatctcaatagttacatcataagcaaatcac |
29896570 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 174 - 255
Target Start/End: Complemental strand, 45228060 - 45227981
Alignment:
| Q |
174 |
aaaacctatctcattatttatatatatagactttaaagagaagaacagccattatctcaatagttacaccataagaaaatca |
255 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||||||||||||||| | ||||| ||||||||| || |||||| |||||| |
|
|
| T |
45228060 |
aaaacctatctcattatttatatata--gactttaaagagaagaacaactattatatcaatagttgcatcataagtaaatca |
45227981 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 16 - 65
Target Start/End: Complemental strand, 13468672 - 13468623
Alignment:
| Q |
16 |
cggcgcacaggctaacactaactcatgatatatttagcctggcaagccta |
65 |
Q |
| |
|
|||||||||||||||||||||||| | ||||| |||||||||||| |||| |
|
|
| T |
13468672 |
cggcgcacaggctaacactaactcgtaatataattagcctggcaaaccta |
13468623 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 104; Significance: 6e-52; HSPs: 6)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 125 - 256
Target Start/End: Original strand, 26300005 - 26300137
Alignment:
| Q |
125 |
aagctttcaggacatttcaagatgcaagtttatcatcacaaaaaatntaaaaacctatctcattatttata--tatatagactttaaagagaagaacagc |
222 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||| ||| ||||| |||||||||||||||||| ||||||||||||||||||||||||| | |
|
|
| T |
26300005 |
aagctttcaggacatttcaagatgcaagtttatcatcacaaagaatataaaa-cctatctcattatttatatatatatagactttaaagagaagaacaac |
26300103 |
T |
|
| Q |
223 |
cattatctcaatagttacaccataagaaaatcac |
256 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| |
|
|
| T |
26300104 |
cattatctcaatagttacaccataagaaaatcac |
26300137 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 10 - 69
Target Start/End: Complemental strand, 15688682 - 15688623
Alignment:
| Q |
10 |
catgaccggcgcacaggctaacactaactcatgatatatttagcctggcaagcctaataa |
69 |
Q |
| |
|
||||||||||||||||||||| ||||||||| |||| || |||||||||||||||||||| |
|
|
| T |
15688682 |
catgaccggcgcacaggctaatactaactcacgataaatatagcctggcaagcctaataa |
15688623 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 10 - 69
Target Start/End: Complemental strand, 15696275 - 15696216
Alignment:
| Q |
10 |
catgaccggcgcacaggctaacactaactcatgatatatttagcctggcaagcctaataa |
69 |
Q |
| |
|
||||||||||||||||||||| ||||||||| |||| || |||||||||||||||||||| |
|
|
| T |
15696275 |
catgaccggcgcacaggctaatactaactcacgataaatatagcctggcaagcctaataa |
15696216 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 10 - 69
Target Start/End: Complemental strand, 15703255 - 15703196
Alignment:
| Q |
10 |
catgaccggcgcacaggctaacactaactcatgatatatttagcctggcaagcctaataa |
69 |
Q |
| |
|
||||||||||||||||||||| ||||||||| |||| || |||||||||||||||||||| |
|
|
| T |
15703255 |
catgaccggcgcacaggctaatactaactcacgataaatatagcctggcaagcctaataa |
15703196 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 66
Target Start/End: Original strand, 8554772 - 8554832
Alignment:
| Q |
6 |
aggtcatgaccggcgcacaggctaacactaactcatgatatatttagcctggcaagcctaa |
66 |
Q |
| |
|
||||||||||||||||||| | ||||||| ||||| |||| |||||||||||||||||| |
|
|
| T |
8554772 |
aggtcatgaccggcgcacaagataacactcactcaacatatgattagcctggcaagcctaa |
8554832 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 24 - 76
Target Start/End: Original strand, 24026049 - 24026101
Alignment:
| Q |
24 |
aggctaacactaactcatgatatatttagcctggcaagcctaataaactataa |
76 |
Q |
| |
|
||||||||||| |||||| ||||||||||| | ||| ||||||||||||||| |
|
|
| T |
24026049 |
aggctaacactgactcatcatatatttagctggacaatcctaataaactataa |
24026101 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 4 - 69
Target Start/End: Complemental strand, 21542446 - 21542381
Alignment:
| Q |
4 |
tcaggtcatgaccggcgcacaggctaacactaactcatgatatatttagcctggcaagcctaataa |
69 |
Q |
| |
|
|||| |||||||||||||||||||||||||| |||||| ||||| ||||||||||||||||||||| |
|
|
| T |
21542446 |
tcagatcatgaccggcgcacaggctaacactgactcatcatataattagcctggcaagcctaataa |
21542381 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0608 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0608
Description:
Target: scaffold0608; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 8 - 125
Target Start/End: Complemental strand, 5380 - 5267
Alignment:
| Q |
8 |
gtcatgaccggcgcacaggctaacactaactcatgatatatttagcctggcaagcctaataaactataagacttacttacacctttctaaaatactaaaa |
107 |
Q |
| |
|
||||||||||||| |||||||||||| ||||||||| | || ||| || ||||||||| ||||||||| ||||||||||||| |||||| | ||| |
|
|
| T |
5380 |
gtcatgaccggcgtacaggctaacacaaactcatgaaaaatatagtctagcaagcctaggaaactataa----cacttacacctttccaaaataatgaaa |
5285 |
T |
|
| Q |
108 |
ttttggtaatgactcaca |
125 |
Q |
| |
|
|||| ||||||||||||| |
|
|
| T |
5284 |
tttttgtaatgactcaca |
5267 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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