View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4299_low_18 (Length: 359)

Name: NF4299_low_18
Description: NF4299
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4299_low_18
NF4299_low_18
[»] chr8 (48 HSPs)
chr8 (56-350)||(39435116-39435410)
chr8 (56-184)||(70523-70651)
chr8 (56-184)||(6602518-6602646)
chr8 (56-184)||(6677971-6678099)
chr8 (56-185)||(35779497-35779626)
chr8 (56-184)||(1340-1468)
chr8 (56-180)||(39303313-39303438)
chr8 (56-184)||(31695269-31695397)
chr8 (56-184)||(32333114-32333242)
chr8 (56-184)||(42192639-42192767)
chr8 (56-184)||(1078648-1078776)
chr8 (56-184)||(4530982-4531110)
chr8 (56-184)||(28817256-28817384)
chr8 (56-184)||(7792661-7792789)
chr8 (86-184)||(18386708-18386806)
chr8 (56-166)||(42885192-42885302)
chr8 (56-184)||(3822396-3822524)
chr8 (57-185)||(40911220-40911347)
chr8 (56-184)||(45264640-45264767)
chr8 (223-350)||(24125477-24125603)
chr8 (59-184)||(7813322-7813447)
chr8 (223-350)||(37517538-37517665)
chr8 (57-168)||(41849233-41849343)
chr8 (56-185)||(12534720-12534847)
chr8 (56-186)||(31969720-31969850)
chr8 (56-184)||(10963242-10963368)
chr8 (57-185)||(9292017-9292145)
chr8 (56-184)||(29425357-29425479)
chr8 (56-184)||(6099572-6099700)
chr8 (223-350)||(500676-500803)
chr8 (57-180)||(18752345-18752468)
chr8 (56-130)||(9775042-9775116)
chr8 (230-350)||(4006978-4007101)
chr8 (56-173)||(14400726-14400843)
chr8 (59-156)||(31532128-31532225)
chr8 (57-168)||(7403696-7403806)
chr8 (82-160)||(5385362-5385440)
chr8 (98-184)||(22979604-22979690)
chr8 (223-350)||(25021333-25021462)
chr8 (56-124)||(13891150-13891218)
chr8 (82-185)||(41753006-41753109)
chr8 (223-350)||(42921661-42921788)
chr8 (56-124)||(33731464-33731532)
chr8 (1-37)||(39435433-39435469)
chr8 (56-184)||(42364702-42364829)
chr8 (56-145)||(2907054-2907142)
chr8 (59-166)||(40932727-40932834)
chr8 (223-299)||(36006001-36006075)
[»] chr5 (34 HSPs)
chr5 (227-350)||(27337142-27337265)
chr5 (223-350)||(433741-433868)
chr5 (234-350)||(25662859-25662975)
chr5 (56-184)||(35317697-35317825)
chr5 (59-184)||(1191543-1191668)
chr5 (56-184)||(13203957-13204085)
chr5 (56-184)||(21018223-21018351)
chr5 (223-350)||(15291554-15291681)
chr5 (56-183)||(4824939-4825066)
chr5 (56-185)||(12257355-12257484)
chr5 (56-184)||(2970984-2971112)
chr5 (56-184)||(11124652-11124780)
chr5 (65-184)||(27721431-27721550)
chr5 (56-151)||(31909385-31909480)
chr5 (82-184)||(9576987-9577089)
chr5 (56-186)||(29265873-29266003)
chr5 (59-183)||(17984745-17984869)
chr5 (224-350)||(3113698-3113824)
chr5 (59-181)||(6020995-6021117)
chr5 (56-180)||(8734000-8734125)
chr5 (59-184)||(40177624-40177749)
chr5 (56-184)||(21112049-21112177)
chr5 (56-184)||(35545933-35546061)
chr5 (56-184)||(2786271-2786398)
chr5 (56-185)||(32143414-32143531)
chr5 (57-184)||(3386894-3387028)
chr5 (230-350)||(32269331-32269451)
chr5 (56-122)||(23262606-23262672)
chr5 (241-350)||(26212132-26212241)
chr5 (56-106)||(19181789-19181838)
chr5 (56-186)||(28591350-28591480)
chr5 (278-348)||(35456213-35456283)
chr5 (138-174)||(4842494-4842530)
chr5 (59-123)||(41580078-41580142)
[»] chr7 (61 HSPs)
chr7 (223-350)||(5827703-5827830)
chr7 (56-184)||(25112247-25112375)
chr7 (56-185)||(11355822-11355951)
chr7 (56-184)||(4106738-4106866)
chr7 (56-184)||(31770532-31770660)
chr7 (59-184)||(44083940-44084065)
chr7 (56-184)||(25546275-25546403)
chr7 (56-185)||(40058237-40058366)
chr7 (56-184)||(23358185-23358313)
chr7 (56-169)||(4107324-4107437)
chr7 (56-173)||(29484755-29484872)
chr7 (56-183)||(47250251-47250378)
chr7 (56-181)||(8439081-8439206)
chr7 (63-178)||(27229484-27229600)
chr7 (57-180)||(43753754-43753878)
chr7 (56-184)||(47557781-47557909)
chr7 (82-184)||(46427360-46427462)
chr7 (56-184)||(2146636-2146764)
chr7 (60-184)||(38033729-38033853)
chr7 (56-151)||(47570718-47570813)
chr7 (83-185)||(29255716-29255817)
chr7 (56-184)||(10220473-10220600)
chr7 (56-183)||(48146754-48146881)
chr7 (56-174)||(5587290-5587408)
chr7 (56-174)||(5592251-5592369)
chr7 (236-350)||(32585596-32585710)
chr7 (82-184)||(47960981-47961083)
chr7 (56-184)||(48444152-48444280)
chr7 (56-166)||(41183833-41183943)
chr7 (56-184)||(7162790-7162916)
chr7 (56-169)||(28603026-28603139)
chr7 (56-121)||(38781208-38781273)
chr7 (56-184)||(5772819-5772947)
chr7 (56-183)||(42081619-42081743)
chr7 (271-350)||(4501707-4501786)
chr7 (56-151)||(39513983-39514078)
chr7 (59-185)||(15634882-15635008)
chr7 (56-170)||(31288224-31288338)
chr7 (66-184)||(34763454-34763560)
chr7 (56-184)||(32606330-32606458)
chr7 (61-184)||(18506281-18506403)
chr7 (86-185)||(43203305-43203404)
chr7 (233-346)||(24528043-24528156)
chr7 (71-184)||(25049973-25050086)
chr7 (56-185)||(25872762-25872891)
chr7 (56-184)||(27915580-27915709)
chr7 (56-181)||(35309854-35309982)
chr7 (56-167)||(4001844-4001953)
chr7 (294-350)||(10905552-10905608)
chr7 (56-106)||(19630668-19630718)
chr7 (56-185)||(40657525-40657657)
chr7 (56-185)||(7298125-7298254)
chr7 (59-183)||(23036208-23036330)
chr7 (56-181)||(35577876-35578001)
chr7 (132-184)||(25504007-25504059)
chr7 (71-169)||(13887186-13887282)
chr7 (82-184)||(5462976-5463078)
chr7 (135-184)||(27737949-27737998)
chr7 (130-166)||(3838626-3838662)
chr7 (274-346)||(4175672-4175744)
chr7 (85-181)||(34038491-34038587)
[»] chr3 (49 HSPs)
chr3 (56-189)||(43247650-43247783)
chr3 (56-184)||(54158266-54158394)
chr3 (56-186)||(42392805-42392935)
chr3 (56-184)||(7824454-7824582)
chr3 (56-184)||(29689482-29689610)
chr3 (56-184)||(51665925-51666053)
chr3 (56-184)||(54151681-54151809)
chr3 (223-350)||(53786157-53786284)
chr3 (56-186)||(4601423-4601553)
chr3 (62-184)||(55018040-55018162)
chr3 (57-185)||(35461480-35461608)
chr3 (56-172)||(36228994-36229110)
chr3 (56-187)||(52500835-52500966)
chr3 (59-168)||(9349679-9349788)
chr3 (56-184)||(28844504-28844633)
chr3 (56-168)||(475281-475392)
chr3 (56-172)||(3112995-3113111)
chr3 (56-184)||(41377584-41377707)
chr3 (56-184)||(33334608-33334736)
chr3 (57-157)||(38257304-38257404)
chr3 (57-184)||(40756728-40756856)
chr3 (56-184)||(43775223-43775351)
chr3 (59-184)||(7958569-7958694)
chr3 (230-350)||(29862246-29862367)
chr3 (56-185)||(50729523-50729652)
chr3 (56-185)||(50783197-50783326)
chr3 (65-172)||(448884-448991)
chr3 (56-183)||(51054702-51054829)
chr3 (232-348)||(52411442-52411558)
chr3 (56-180)||(55320400-55320523)
chr3 (58-184)||(1778851-1778977)
chr3 (237-319)||(35236608-35236690)
chr3 (56-184)||(29750621-29750748)
chr3 (56-184)||(47635005-47635133)
chr3 (231-335)||(49018416-49018520)
chr3 (56-183)||(2590810-2590928)
chr3 (277-350)||(7501724-7501797)
chr3 (82-186)||(23939177-23939281)
chr3 (286-350)||(52741121-52741185)
chr3 (113-180)||(51112521-51112588)
chr3 (56-185)||(8137633-8137760)
chr3 (56-181)||(31305744-31305868)
chr3 (56-185)||(32001424-32001553)
chr3 (72-125)||(43023694-43023747)
chr3 (56-184)||(28458663-28458790)
chr3 (82-151)||(8151381-8151450)
chr3 (116-183)||(28731847-28731915)
chr3 (113-180)||(47410809-47410877)
chr3 (132-180)||(47770329-47770377)
[»] chr4 (58 HSPs)
chr4 (56-184)||(1173951-1174079)
chr4 (56-184)||(43139906-43140034)
chr4 (56-185)||(34739279-34739408)
chr4 (56-184)||(53457824-53457952)
chr4 (56-185)||(26424858-26424986)
chr4 (56-184)||(18257329-18257457)
chr4 (56-185)||(19849503-19849632)
chr4 (56-184)||(45874055-45874183)
chr4 (56-184)||(238458-238586)
chr4 (56-184)||(28798388-28798516)
chr4 (56-184)||(54768432-54768560)
chr4 (56-184)||(12867841-12867969)
chr4 (56-182)||(19225261-19225387)
chr4 (56-181)||(22607988-22608113)
chr4 (56-173)||(23417483-23417600)
chr4 (56-184)||(12735431-12735559)
chr4 (56-180)||(29581044-29581167)
chr4 (57-185)||(55214651-55214779)
chr4 (57-184)||(12767087-12767214)
chr4 (82-169)||(2075521-2075607)
chr4 (56-184)||(11277982-11278106)
chr4 (91-185)||(32441119-32441213)
chr4 (56-185)||(55400227-55400356)
chr4 (56-184)||(19673929-19674057)
chr4 (60-184)||(23710337-23710461)
chr4 (56-152)||(33770600-33770696)
chr4 (82-184)||(37134048-37134150)
chr4 (223-350)||(16957985-16958111)
chr4 (60-181)||(19814108-19814229)
chr4 (56-184)||(31014982-31015110)
chr4 (230-350)||(56461652-56461772)
chr4 (56-123)||(1966611-1966678)
chr4 (56-171)||(52171990-52172105)
chr4 (56-185)||(51287600-51287730)
chr4 (82-170)||(22910283-22910371)
chr4 (82-170)||(22968151-22968239)
chr4 (56-184)||(50347329-50347457)
chr4 (233-344)||(32335307-32335417)
chr4 (57-183)||(516457-516583)
chr4 (82-184)||(2864774-2864876)
chr4 (65-122)||(39807906-39807963)
chr4 (70-163)||(49030753-49030845)
chr4 (56-181)||(52768301-52768425)
chr4 (94-181)||(3465755-3465842)
chr4 (82-173)||(37395635-37395726)
chr4 (94-168)||(32778141-32778215)
chr4 (56-125)||(37620676-37620745)
chr4 (241-353)||(48505747-48505859)
chr4 (132-183)||(40292691-40292742)
chr4 (87-183)||(46194249-46194346)
chr4 (56-124)||(24417878-24417946)
chr4 (57-167)||(2804539-2804647)
chr4 (59-114)||(23532117-23532172)
chr4 (321-350)||(3330392-3330421)
chr4 (56-109)||(16555382-16555435)
chr4 (127-184)||(19119144-19119201)
chr4 (57-169)||(1125902-1126014)
chr4 (71-111)||(31751837-31751876)
[»] chr1 (49 HSPs)
chr1 (56-185)||(32007073-32007202)
chr1 (56-185)||(5055788-5055917)
chr1 (56-184)||(41808202-41808330)
chr1 (56-186)||(29994383-29994513)
chr1 (56-185)||(28455873-28456002)
chr1 (56-184)||(45813011-45813139)
chr1 (56-184)||(48660022-48660150)
chr1 (56-184)||(49783707-49783835)
chr1 (56-185)||(20747-20876)
chr1 (56-185)||(192414-192543)
chr1 (56-184)||(41761411-41761539)
chr1 (56-173)||(39276361-39276478)
chr1 (56-160)||(7059491-7059595)
chr1 (231-349)||(28040666-28040784)
chr1 (57-183)||(35945798-35945924)
chr1 (56-185)||(13109769-13109898)
chr1 (92-181)||(29587255-29587344)
chr1 (59-184)||(39284290-39284415)
chr1 (56-183)||(5943682-5943809)
chr1 (223-350)||(19035876-19036003)
chr1 (59-169)||(7275696-7275806)
chr1 (57-182)||(21938944-21939069)
chr1 (83-184)||(46447404-46447505)
chr1 (56-124)||(41039303-41039371)
chr1 (275-353)||(38732029-38732107)
chr1 (59-184)||(2088908-2089033)
chr1 (237-350)||(34645015-34645127)
chr1 (230-348)||(7794453-7794571)
chr1 (86-172)||(16770186-16770272)
chr1 (56-181)||(778578-778702)
chr1 (56-184)||(26032798-26032929)
chr1 (56-137)||(35110099-35110180)
chr1 (265-350)||(37200704-37200789)
chr1 (94-168)||(35224356-35224430)
chr1 (220-350)||(22375168-22375299)
chr1 (98-172)||(47111469-47111543)
chr1 (56-149)||(13097339-13097432)
chr1 (60-124)||(50106200-50106264)
chr1 (223-309)||(15585350-15585436)
chr1 (82-159)||(3716636-3716713)
chr1 (56-184)||(4065961-4066089)
chr1 (56-122)||(3716424-3716490)
chr1 (230-308)||(37917632-37917710)
chr1 (82-160)||(38817225-38817303)
chr1 (57-106)||(32982351-32982400)
chr1 (59-151)||(13183179-13183271)
chr1 (57-109)||(26264537-26264589)
chr1 (113-178)||(44836175-44836242)
chr1 (128-184)||(45294658-45294714)
[»] scaffold1348 (1 HSPs)
scaffold1348 (56-184)||(862-990)
[»] chr6 (34 HSPs)
chr6 (56-184)||(33621494-33621622)
chr6 (56-185)||(4464126-4464255)
chr6 (56-184)||(33704216-33704344)
chr6 (56-186)||(28322930-28323060)
chr6 (56-191)||(21000685-21000820)
chr6 (224-350)||(34304946-34305072)
chr6 (56-185)||(21037290-21037418)
chr6 (56-184)||(361011-361139)
chr6 (56-184)||(2959149-2959277)
chr6 (262-350)||(4206166-4206254)
chr6 (56-185)||(24619079-24619208)
chr6 (56-185)||(35218640-35218757)
chr6 (80-185)||(11572007-11572112)
chr6 (262-350)||(45239-45327)
chr6 (56-159)||(16518448-16518549)
chr6 (56-118)||(19145536-19145598)
chr6 (56-121)||(29009650-29009715)
chr6 (57-184)||(12252023-12252150)
chr6 (223-350)||(29337617-29337744)
chr6 (262-350)||(26225242-26225330)
chr6 (94-185)||(33255488-33255578)
chr6 (86-185)||(3057401-3057496)
chr6 (230-311)||(8374836-8374917)
chr6 (104-184)||(10226540-10226620)
chr6 (94-185)||(4610863-4610953)
chr6 (283-350)||(12401775-12401842)
chr6 (85-124)||(17590391-17590430)
chr6 (87-169)||(31963765-31963847)
chr6 (295-353)||(32116135-32116193)
chr6 (127-172)||(5598846-5598891)
chr6 (99-180)||(7197849-7197930)
chr6 (56-121)||(22576244-22576309)
chr6 (86-180)||(735448-735543)
chr6 (113-180)||(21513075-21513143)
[»] chr2 (56 HSPs)
chr2 (56-184)||(10639606-10639734)
chr2 (56-184)||(33083554-33083682)
chr2 (56-184)||(11459715-11459843)
chr2 (223-350)||(4412597-4412724)
chr2 (223-350)||(41867439-41867566)
chr2 (56-186)||(19048752-19048882)
chr2 (56-186)||(23839857-23839987)
chr2 (223-350)||(9684946-9685073)
chr2 (223-350)||(17345087-17345214)
chr2 (223-350)||(44686866-44686993)
chr2 (56-180)||(11816550-11816675)
chr2 (56-184)||(26605624-26605752)
chr2 (230-350)||(28225449-28225568)
chr2 (56-186)||(39831444-39831573)
chr2 (56-184)||(19537307-19537435)
chr2 (56-172)||(37197610-37197726)
chr2 (56-184)||(39535534-39535662)
chr2 (56-184)||(45125165-45125293)
chr2 (56-184)||(34460369-34460497)
chr2 (223-350)||(20142271-20142398)
chr2 (59-184)||(11708678-11708803)
chr2 (56-184)||(4851320-4851448)
chr2 (56-184)||(29659218-29659346)
chr2 (223-319)||(18744549-18744645)
chr2 (56-184)||(42578180-42578296)
chr2 (59-181)||(4800879-4801001)
chr2 (56-184)||(7275886-7276015)
chr2 (56-184)||(34234530-34234656)
chr2 (59-180)||(43684073-43684194)
chr2 (56-184)||(19816220-19816348)
chr2 (56-184)||(27137918-27138045)
chr2 (233-344)||(19161367-19161478)
chr2 (56-178)||(21312211-21312331)
chr2 (58-184)||(15782590-15782715)
chr2 (87-185)||(45201903-45202001)
chr2 (56-181)||(38440197-38440322)
chr2 (56-180)||(42025674-42025799)
chr2 (82-185)||(9815824-9815925)
chr2 (71-182)||(6055020-6055131)
chr2 (86-181)||(16654366-16654461)
chr2 (59-185)||(7349097-7349223)
chr2 (56-125)||(33001761-33001830)
chr2 (56-184)||(44181887-44182015)
chr2 (58-181)||(20497592-20497715)
chr2 (105-180)||(25501832-25501907)
chr2 (59-181)||(34093240-34093363)
chr2 (82-185)||(40786235-40786338)
chr2 (128-178)||(8311335-8311385)
chr2 (127-181)||(32844648-32844702)
chr2 (59-172)||(40825161-40825274)
chr2 (56-125)||(43778468-43778537)
chr2 (113-180)||(23957055-23957123)
chr2 (145-184)||(13106356-13106395)
chr2 (84-117)||(12366795-12366828)
chr2 (87-124)||(29726075-29726112)
chr2 (82-183)||(34239846-34239947)
[»] scaffold0032 (1 HSPs)
scaffold0032 (56-185)||(56480-56609)
[»] scaffold0038 (1 HSPs)
scaffold0038 (56-186)||(114250-114380)
[»] scaffold0119 (2 HSPs)
scaffold0119 (56-184)||(13951-14079)
scaffold0119 (56-184)||(19631-19759)
[»] scaffold0044 (1 HSPs)
scaffold0044 (56-184)||(9973-10101)
[»] scaffold0067 (1 HSPs)
scaffold0067 (56-185)||(34817-34947)
[»] scaffold0352 (1 HSPs)
scaffold0352 (56-185)||(8943-9072)
[»] scaffold0053 (1 HSPs)
scaffold0053 (56-173)||(22174-22291)
[»] scaffold0186 (1 HSPs)
scaffold0186 (232-350)||(20170-20288)
[»] scaffold0360 (1 HSPs)
scaffold0360 (101-185)||(14494-14578)
[»] scaffold0495 (1 HSPs)
scaffold0495 (104-184)||(3259-3339)
[»] scaffold0002 (1 HSPs)
scaffold0002 (113-179)||(411652-411719)


Alignment Details
Target: chr8 (Bit Score: 263; Significance: 1e-146; HSPs: 48)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 263; E-Value: 1e-146
Query Start/End: Original strand, 56 - 350
Target Start/End: Complemental strand, 39435410 - 39435116
Alignment:
Q  56 gtcttagatgaagtcgtaatccacataaattaaactcacacacaactgtgaggtcccgggttcgaacccatatcatgacgtccgaccttgcaattttgac 155  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||    
T  39435410 gtcttagatgaagtcgtaatccacataaattaaactcacacacaactgtgaggtctcgggttcgaacccagatcatgacgtccgaccttgcaattttgac 39435311  T
Q  156 atttgccagttgagctagaacttctagactgctaatagttatttcttttcatgcttttgtttcttttcaagcaccacatgctcaagattttcttccagct 255  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  39435310 atttgccagttgagctagaacttctagacggctaatagttatttcttttcatgcttttgtttcttttcaagcaccacatgctcaagattttcttctagct 39435211  T
Q  256 attccaattgatggattaggtcagcatatgtcaccagttgagtaccgtactatccttcgatatcatcttatgattccactttttcctattgatga 350  Q
    || ||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  39435210 atcccaattgatgggttaggtcagcatatgtcactagttgagtaccgtactatccttcgatatcgtcttatgattccactttttcctattgatga 39435116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 56 - 184
Target Start/End: Original strand, 70523 - 70651
Alignment:
Q  56 gtcttagatgaagtcgtaatccacataaattaaactcacacacaactgtgaggtcccgggttcgaacccatatcatgacgtccgaccttgcaattttgac 155  Q
    |||||||||||||| |||||||||  ||| ||||||||||||||||||||||||||||||||| |||||   |||||||||||||||||||||||| | |    
T  70523 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcaaacccgggtcatgacgtccgaccttgcaatttcggc 70622  T
Q  156 atttgccagttgagctagaacttctagac 184  Q
    |||||||||||||||||| ||||||||||    
T  70623 atttgccagttgagctaggacttctagac 70651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 56 - 184
Target Start/End: Original strand, 6602518 - 6602646
Alignment:
Q  56 gtcttagatgaagtcgtaatccacataaattaaactcacacacaactgtgaggtcccgggttcgaacccatatcatgacgtccgaccttgcaattttgac 155  Q
    |||||||||||||| |||||||||  ||| |||||||||||||||||||||||||||||||||||||||   |||||||||||| ||||||||||| | |    
T  6602518 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgacgtccggccttgcaatttcggc 6602617  T
Q  156 atttgccagttgagctagaacttctagac 184  Q
    |||||||||||||||||| ||||||||||    
T  6602618 atttgccagttgagctaggacttctagac 6602646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 56 - 184
Target Start/End: Original strand, 6677971 - 6678099
Alignment:
Q  56 gtcttagatgaagtcgtaatccacataaattaaactcacacacaactgtgaggtcccgggttcgaacccatatcatgacgtccgaccttgcaattttgac 155  Q
    |||||||||||||| |||||||||  ||| |||||||||||||||||||||||||||||||||||||||   |||||||||||| ||||||||||| | |    
T  6677971 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgacgtccggccttgcaatttcggc 6678070  T
Q  156 atttgccagttgagctagaacttctagac 184  Q
    |||||||||||||||||| ||||||||||    
T  6678071 atttgccagttgagctaggacttctagac 6678099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 56 - 185
Target Start/End: Original strand, 35779497 - 35779626
Alignment:
Q  56 gtcttagatgaagtcgtaatccacataaattaaactcacacacaactgtgaggtcccgggttcgaacccatatcatgacgtccgaccttgcaattttgac 155  Q
    |||||||||||||| |||||||||  ||| |||||||||||||||||||||||||||||||||||||||   |||  ||||||| ||||||||||||| |    
T  35779497 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccgggtcacaacgtccggccttgcaattttggc 35779596  T
Q  156 atttgccagttgagctagaacttctagact 185  Q
    |||||||||||||||||| |||||||||||    
T  35779597 atttgccagttgagctaggacttctagact 35779626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 56 - 184
Target Start/End: Original strand, 1340 - 1468
Alignment:
Q  56 gtcttagatgaagtcgtaatccacataaattaaactcacacacaactgtgaggtcccgggttcgaacccatatcatgacgtccgaccttgcaattttgac 155  Q
    |||||||||||||| |||||||||  ||| ||||||||||||||||||||||||||||||||||||||    |||  ||||||| ||||||||||||| |    
T  1340 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaaccagggtcacaacgtccggccttgcaattttggc 1439  T
Q  156 atttgccagttgagctagaacttctagac 184  Q
    |||||||||||||||||||||||||||||    
T  1440 atttgccagttgagctagaacttctagac 1468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 56 - 180
Target Start/End: Complemental strand, 39303438 - 39303313
Alignment:
Q  56 gtcttagatgaagtcgtaatccacataaattaaa-ctcacacacaactgtgaggtcccgggttcgaacccatatcatgacgtccgaccttgcaattttga 154  Q
    |||||||||||||| |||||||||  |||||||| ||||||||||||||||||||| ||||||| ||||||| |||||||||||| ||||||||||| |     
T  39303438 gtcttagatgaagtggtaatccactgaaattaaaactcacacacaactgtgaggtctcgggttcaaacccatgtcatgacgtccggccttgcaatttcgg 39303339  T
Q  155 catttgccagttgagctagaacttct 180  Q
    ||||||||||||||||||| ||||||    
T  39303338 catttgccagttgagctaggacttct 39303313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 56 - 184
Target Start/End: Original strand, 31695269 - 31695397
Alignment:
Q  56 gtcttagatgaagtcgtaatccacataaattaaactcacacacaactgtgaggtcccgggttcgaacccatatcatgacgtccgaccttgcaattttgac 155  Q
    |||||||||||||| |||| |||   ||||||||||||||||||| ||||||||||| |||||||| ||  |||||||| ||| ||||||||||||||||    
T  31695269 gtcttagatgaagtggtaaaccattgaaattaaactcacacacaattgtgaggtcccaggttcgaatccgaatcatgacatccaaccttgcaattttgac 31695368  T
Q  156 atttgccagttgagctagaacttctagac 184  Q
    || ||||||||||||||||||||||||||    
T  31695369 atgtgccagttgagctagaacttctagac 31695397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 56 - 184
Target Start/End: Complemental strand, 32333242 - 32333114
Alignment:
Q  56 gtcttagatgaagtcgtaatccacataaattaaactcacacacaactgtgaggtcccgggttcgaacccatatcatgacgtccgaccttgcaattttgac 155  Q
    |||||||||||||| |||||||||  ||| |||||||||||||||||||||||||||||||||||||||   |||  ||||||| ||||||||||| | |    
T  32333242 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccgggtcacaacgtccggccttgcaatttcggc 32333143  T
Q  156 atttgccagttgagctagaacttctagac 184  Q
    |||||||||||||||||| ||||||||||    
T  32333142 atttgccagttgagctaggacttctagac 32333114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 56 - 184
Target Start/End: Original strand, 42192639 - 42192767
Alignment:
Q  56 gtcttagatgaagtcgtaatccacataaattaaactcacacacaactgtgaggtcccgggttcgaacccatatcatgacgtccgaccttgcaattttgac 155  Q
    |||||||||||||| |||||||||  ||| |||||||||||||||||||||| |||||||||||||| |   |||||||||||| ||||||||||| | |    
T  42192639 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgagatcccgggttcgaactcgggtcatgacgtccggccttgcaatttcggc 42192738  T
Q  156 atttgccagttgagctagaacttctagac 184  Q
    |||||||||||||||||| ||||||||||    
T  42192739 atttgccagttgagctaggacttctagac 42192767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 56 - 184
Target Start/End: Original strand, 1078648 - 1078776
Alignment:
Q  56 gtcttagatgaagtcgtaatccacataaattaaactcacacacaactgtgaggtcccgggttcgaacccatatcatgacgtccgaccttgcaattttgac 155  Q
    |||||||||||||| |||||||||  ||| ||||||||||||||||||||||||||||||||||||||    |||||||||||| ||||||||||| | |    
T  1078648 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacctgggtcatgacgtccggccttgcaatttcggc 1078747  T
Q  156 atttgccagttgagctagaacttctagac 184  Q
    |||| ||||||||||||  ||||||||||    
T  1078748 atttaccagttgagctacgacttctagac 1078776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 56 - 184
Target Start/End: Original strand, 4530982 - 4531110
Alignment:
Q  56 gtcttagatgaagtcgtaatccacataaattaaactcacacacaactgtgaggtcccgggttcgaacccatatcatgacgtccgaccttgcaattttgac 155  Q
    |||||||||||||| |||| ||||  |||||||||||||||||| ||||||||||||||||||||||||   |||||||||||  ||||||||||| | |    
T  4530982 gtcttagatgaagtggtaaaccactgaaattaaactcacacacagctgtgaggtcccgggttcgaacccgggtcatgacgtccagccttgcaatttcggc 4531081  T
Q  156 atttgccagttgagctagaacttctagac 184  Q
    |||||||| ||||||||| ||||||||||    
T  4531082 atttgccaattgagctaggacttctagac 4531110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 56 - 184
Target Start/End: Complemental strand, 28817384 - 28817256
Alignment:
Q  56 gtcttagatgaagtcgtaatccacataaattaaactcacacacaactgtgaggtcccgggttcgaacccatatcatgacgtccgaccttgcaattttgac 155  Q
    |||||||||||||| |||||||||  ||| |||||||||||||||||||||| ||||||||||||||||   |||  ||||||| ||||||||||| | |    
T  28817384 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgagatcccgggttcgaacccgggtcacaacgtccggccttgcaatttcggc 28817285  T
Q  156 atttgccagttgagctagaacttctagac 184  Q
    |||||||||||||||||| ||||||||||    
T  28817284 atttgccagttgagctaggacttctagac 28817256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 56 - 184
Target Start/End: Complemental strand, 7792789 - 7792661
Alignment:
Q  56 gtcttagatgaagtcgtaatccacataaattaaactcacacacaactgtgaggtcccgggttcgaacccatatcatgacgtccgaccttgcaattttgac 155  Q
    |||||||||||||| |||||||||  ||| |||||||||||||||||||||| ||||||||||||||||   |||  ||||||  ||||||||||| | |    
T  7792789 gtcttagatgaagtagtaatccactgaaaataaactcacacacaactgtgagatcccgggttcgaacccgagtcacaacgtccagccttgcaatttcggc 7792690  T
Q  156 atttgccagttgagctagaacttctagac 184  Q
    |||||||||||||||||| ||||||||||    
T  7792689 atttgccagttgagctaggacttctagac 7792661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 86 - 184
Target Start/End: Complemental strand, 18386806 - 18386708
Alignment:
Q  86 taaactcacacacaactgtgaggtcccgggttcgaacccatatcatgacgtccgaccttgcaattttgacatttgccagttgagctagaacttctagac 184  Q
    |||||||||||||||||||||||||||||||||||||||   ||||||| ||||||||||||||||   |||||| |||||||||||||||||||||||    
T  18386806 taaactcacacacaactgtgaggtcccgggttcgaacccgagtcatgacatccgaccttgcaatttcagcatttgtcagttgagctagaacttctagac 18386708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 56 - 166
Target Start/End: Complemental strand, 42885302 - 42885192
Alignment:
Q  56 gtcttagatgaagtcgtaatccacataaattaaactcacacacaactgtgaggtcccgggttcgaacccatatcatgacgtccgaccttgcaattttgac 155  Q
    |||||||||||||| |||||||||  ||| |||||||||||||||||||||| ||||||||||||||||   |||||||||||| ||||||||||| | |    
T  42885302 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgagatcccgggttcgaacccgggtcatgacgtccggccttgcaatttcggc 42885203  T
Q  156 atttgccagtt 166  Q
    |||||||||||    
T  42885202 atttgccagtt 42885192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 56 - 184
Target Start/End: Complemental strand, 3822524 - 3822396
Alignment:
Q  56 gtcttagatgaagtcgtaatccacataaattaaactcacacacaactgtgaggtcccgggttcgaacccatatcatgacgtccgaccttgcaattttgac 155  Q
    |||||||| ||||| ||||| |||  |||||||||||||||||||||||||| ||| ||||||||||||   |||  |||||||||||| |||||| | |    
T  3822524 gtcttagaagaagtggtaattcactaaaattaaactcacacacaactgtgagatcctgggttcgaacccgggtcacaacgtccgaccttacaatttcggc 3822425  T
Q  156 atttgccagttgagctagaacttctagac 184  Q
    ||||||||||||| |||||||||||||||    
T  3822424 atttgccagttgaactagaacttctagac 3822396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 57 - 185
Target Start/End: Complemental strand, 40911347 - 40911220
Alignment:
Q  57 tcttagatgaagtcgtaatccacataaattaaactcacacacaactgtgaggtcccgggttcgaacccatatcatgacgtccgaccttgcaattttgaca 156  Q
    ||||||||||||| |||| ||||  ||||||||||||||||||  ||||||||||||| |||||||||   ||| |||||||| ||||||||||| | ||    
T  40911347 tcttagatgaagtggtaagccactgaaattaaactcacacacagttgtgaggtcccgg-ttcgaacccgggtcacgacgtccggccttgcaatttcggca 40911249  T
Q  157 tttgccagttgagctagaacttctagact 185  Q
    ||||||||||||||||| |||||||||||    
T  40911248 tttgccagttgagctagcacttctagact 40911220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 56 - 184
Target Start/End: Original strand, 45264640 - 45264767
Alignment:
Q  56 gtcttagatgaagtcgtaatccacataaattaaactcacacacaactgtgaggtcccgggttcgaacccatatcatgacgtccgaccttgcaattttgac 155  Q
    |||||||| ||||| |||||||||  |||||||||||||||| ||||||||||||||||||||||||||   ||| ||||| ||||| |||||||| | |    
T  45264640 gtcttagaggaagtggtaatccactgaaattaaactcacacaaaactgtgaggtcccgggttcgaacccgagtcacgacgttcgacc-tgcaatttcggc 45264738  T
Q  156 atttgccagttgagctagaacttctagac 184  Q
    |||||||||||||| ||| ||||||||||    
T  45264739 atttgccagttgagttaggacttctagac 45264767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 223 - 350
Target Start/End: Complemental strand, 24125603 - 24125477
Alignment:
Q  223 caagcaccacatgctcaagattttcttccagctattccaattgatggattaggtcagcatatgtcaccagttgagtaccgtactatccttcgatatcatc 322  Q
    |||||| |||||||||| |||||||||| |||||| || |||||||| ||||||||| ||||||||| ||| ||||||||||||||||||  |||||       
T  24125603 caagcatcacatgctcaggattttcttctagctatcccgattgatgggttaggtcaggatatgtcac-agtggagtaccgtactatccttaaatatcgca 24125505  T
Q  323 ttatgattccactttttcctattgatga 350  Q
    ||||||||||||| ||||||||||||||    
T  24125504 ttatgattccactatttcctattgatga 24125477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 59 - 184
Target Start/End: Complemental strand, 7813447 - 7813322
Alignment:
Q  59 ttagatgaagtcgtaatccacataaattaaactcacacacaactgtgaggtcccgggttcgaacccatatcatgacgtccgaccttgcaattttgacatt 158  Q
    ||||||||||| |||||||||  ||| |||||||||||||||||||||||||||||||||||||||   |||  || |||| |||||||||||   ||||    
T  7813447 ttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccgagtcacaacatccggccttgcaatttcagcatt 7813348  T
Q  159 tgccagttgagctagaacttctagac 184  Q
    |||| |||||||||| ||||||||||    
T  7813347 tgccggttgagctaggacttctagac 7813322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 223 - 350
Target Start/End: Complemental strand, 37517665 - 37517538
Alignment:
Q  223 caagcaccacatgctcaagattttcttccagctattccaattgatggattaggtcagcatatgtcaccagttgagtaccgtactatccttcgatatcatc 322  Q
    |||||| |||||||||| |||||||||| |  ||| || |||||||| |||||||| |||||||||||||| ||||| | || ||||||| ||||||  |    
T  37517665 caagcagcacatgctcatgattttcttctaagtatcccgattgatgggttaggtcaacatatgtcaccagtggagtatcataatatccttagatatcgcc 37517566  T
Q  323 ttatgattccactttttcctattgatga 350  Q
    ||||||||||||| ||||||||||||||    
T  37517565 ttatgattccactatttcctattgatga 37517538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 57 - 168
Target Start/End: Original strand, 41849233 - 41849343
Alignment:
Q  57 tcttagatgaagtcgtaatccacataaattaaactcacacacaactgtgaggtcccgggttcgaacccatatcatgacgtccgaccttgcaattttgaca 156  Q
    ||||||||||| | |||||| ||  |||||||||||||||||||| ||||||| |||| |||||||||| |||| |||||||||||||||||||| | ||    
T  41849233 tcttagatgaaatggtaatc-actgaaattaaactcacacacaacagtgaggttccggattcgaacccagatcacgacgtccgaccttgcaatttcggca 41849331  T
Q  157 tttgccagttga 168  Q
    ||||||||||||    
T  41849332 tttgccagttga 41849343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 56 - 185
Target Start/End: Original strand, 12534720 - 12534847
Alignment:
Q  56 gtcttagatgaagtcgtaatccacataaattaaactcacacacaactgtgaggtcccgggttcgaacccatatcatgacgtccgaccttgcaattttgac 155  Q
    |||||||||||||| |||||| ||  ||| ||||||||| ||  |||||||| ||| ||||||||||||  |||| |||||||| ||||||||||| | |    
T  12534720 gtcttagatgaagtggtaatctactgaaaataaactcacgca--actgtgagatcctgggttcgaacccggatcacgacgtccggccttgcaatttcggc 12534817  T
Q  156 atttgccagttgagctagaacttctagact 185  Q
    |||||||||||||||||| |||||||||||    
T  12534818 atttgccagttgagctaggacttctagact 12534847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 56 - 186
Target Start/End: Original strand, 31969720 - 31969850
Alignment:
Q  56 gtcttagatgaagtcgtaatccacataaattaaactcacacacaactgtgaggtcccgggttcgaacccatatcatgacgtccgaccttgcaattttgac 155  Q
    |||||||||||||| |||| ||||  |||||||| |||||||||||| |||||||||| ||||||||||  ||||||||||| | ||||| ||||| | |    
T  31969720 gtcttagatgaagtggtaaaccactgaaattaaattcacacacaactttgaggtcccgtgttcgaacccggatcatgacgtctggccttgaaatttcggc 31969819  T
Q  156 atttgccagttgagctagaacttctagactg 186  Q
    |||||||| || |||||  ||||||||||||    
T  31969820 atttgccaattaagctatgacttctagactg 31969850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 56 - 184
Target Start/End: Original strand, 10963242 - 10963368
Alignment:
Q  56 gtcttagatgaagtcgtaatccacataaattaaactcacacacaactgtgaggtcccgggttcgaacccatatcatgacgtccgaccttgcaattttgac 155  Q
    |||||||||||||| |||||||||  ||| ||||||||||  ||||||||||||||||||||||||||   ||||  |||| || ||||| ||||| | |    
T  10963242 gtcttagatgaagtggtaatccactgaaaataaactcaca--caactgtgaggtcccgggttcgaacctggatcacaacgttcggccttgtaatttcggc 10963339  T
Q  156 atttgccagttgagctagaacttctagac 184  Q
    |||||||||||||||||| ||||||||||    
T  10963340 atttgccagttgagctaggacttctagac 10963368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 57 - 185
Target Start/End: Complemental strand, 9292145 - 9292017
Alignment:
Q  57 tcttagatgaagtcgtaatccacataaattaaactcacacacaactgtgaggtcccgggttcgaacccatatcatgacgtccgaccttgcaattttgaca 156  Q
    ||||||||||||| |||||||||  ||| ||||||||||||||||||||| |||||| |||||||  |   |||  ||||||| | || |||||| ||||    
T  9292145 tcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaagtcccgagttcgaattcgggtcacaacgtccggctttacaatttcgaca 9292046  T
Q  157 tttgccagttgagctagaacttctagact 185  Q
    ||||||||||||||||| |||||||||||    
T  9292045 tttgccagttgagctaggacttctagact 9292017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 56 - 184
Target Start/End: Complemental strand, 29425479 - 29425357
Alignment:
Q  56 gtcttagatgaagtcgtaatccacataaattaaactcacacacaactgtgaggtcccgggttcgaacccatatcatgacgtccgaccttgcaattttgac 155  Q
    |||||||||||||| |||||||||  ||||||||||||||||||| || ||| |||||||      |||   |||||||||||| ||||||||||||| |    
T  29425479 gtcttagatgaagtggtaatccactgaaattaaactcacacacaattgcgagatcccggg------cccgggtcatgacgtccggccttgcaattttggc 29425386  T
Q  156 atttgccagttgagctagaacttctagac 184  Q
    |||||||| ||||||||| ||||||||||    
T  29425385 atttgccaattgagctaggacttctagac 29425357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 56 - 184
Target Start/End: Complemental strand, 6099700 - 6099572
Alignment:
Q  56 gtcttagatgaagtcgtaatccacataaattaaactcacacacaactgtgaggtcccgggttcgaacccatatcatgacgtccgaccttgcaattttgac 155  Q
    |||||||||||||| |||| ||||  ||| ||||||||| | ||| ||||||||  ||||||||||| |   |||||||||||| ||||||||||| |||    
T  6099700 gtcttagatgaagtggtaaaccactaaaactaaactcacgcgcaattgtgaggtttcgggttcgaactcgggtcatgacgtccggccttgcaatttcgac 6099601  T
Q  156 atttgccagttgagctagaacttctagac 184  Q
    |||||| |||||| |||| ||||||||||    
T  6099600 atttgcaagttgaactaggacttctagac 6099572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 223 - 350
Target Start/End: Complemental strand, 500803 - 500676
Alignment:
Q  223 caagcaccacatgctcaagattttcttccagctattccaattgatggattaggtcagcatatgtcaccagttgagtaccgtactatccttcgatatcatc 322  Q
    |||||| || ||||||| |||||||||| ||| || |  |||||||  ||||||||||||||||||||| | |||||||||||||||||| |||||   |    
T  500803 caagcagcatatgctcatgattttcttctagcaatcctgattgatgagttaggtcagcatatgtcaccaatggagtaccgtactatccttagatattgcc 500704  T
Q  323 ttatgattccactttttcctattgatga 350  Q
    ||| ||||||| | ||||||||||||||    
T  500703 ttacgattccaatatttcctattgatga 500676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 57 - 180
Target Start/End: Complemental strand, 18752468 - 18752345
Alignment:
Q  57 tcttagatgaagtcgtaatccacataaattaaactcacacacaactgtgaggtcccgggttcgaacccatatcatgacgtccgaccttgcaattttgaca 156  Q
    ||||| |||||||   |||||||  ||||||||| ||||||||||||| |||| ||||||||||||||  |||| ||||||||||||| |||||| |  |    
T  18752468 tcttanatgaagtgtcaatccactgaaattaaacccacacacaactgtaaggttccgggttcgaaccccgatcacgacgtccgaccttacaatttcggta 18752369  T
Q  157 tttgccagttgagctagaacttct 180  Q
    |||| ||||||| |||| ||||||    
T  18752368 tttgtcagttgaactaggacttct 18752345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 56 - 130
Target Start/End: Original strand, 9775042 - 9775116
Alignment:
Q  56 gtcttagatgaagtcgtaatccacataaattaaactcacacacaactgtgaggtcccgggttcgaacccatatca 130  Q
    |||||||||||||| ||||||||   |||||||||||||||| ||||||||||| ||||||||||||||| ||||    
T  9775042 gtcttagatgaagttgtaatccattcaaattaaactcacacataactgtgaggttccgggttcgaacccagatca 9775116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 230 - 350
Target Start/End: Original strand, 4006978 - 4007101
Alignment:
Q  230 cacatgctcaagattttcttccagctattccaattgatggattaggtcagcatatgtcaccagttgagta---ccgtactatccttcgatatcatcttat 326  Q
    |||||||||| |||||||||| |||||| |  |||||||| ||| ||||||||||||||  ||| ||| |   ||||| ||||||| |||||| ||||||    
T  4006978 cacatgctcatgattttcttctagctatcctgattgatgggttaagtcagcatatgtcattagtggaggaccgccgtattatccttagatatcgtcttat 4007077  T
Q  327 gattccactttttcctattgatga 350  Q
    ||||||||| ||| ||||||||||    
T  4007078 gattccactattttctattgatga 4007101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 56 - 173
Target Start/End: Complemental strand, 14400843 - 14400726
Alignment:
Q  56 gtcttagatgaagtcgtaatccacataaattaaactcacacacaactgtgaggtcccgggttcgaacccatatcatgacgtccgaccttgcaattttgac 155  Q
    |||||||||||||| |||| |||| | |||||||||||| ||||| ||||||||||||||||| || |||  | | ||||||||||| ||||||||        
T  14400843 gtcttagatgaagtggtaaaccacttgaattaaactcactcacaattgtgaggtcccgggttcaaatccagtttacgacgtccgaccgtgcaatttcaga 14400744  T
Q  156 atttgccagttgagctag 173  Q
    ||||| ||||||||||||    
T  14400743 atttgtcagttgagctag 14400726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 59 - 156
Target Start/End: Original strand, 31532128 - 31532225
Alignment:
Q  59 ttagatgaagtcgtaatccacataaattaaactcacacacaactgtgaggtcccgggttcgaacccatatcatgacgtccgaccttgcaattttgaca 156  Q
    ||||||||||| |||||||||  ||||||||||||||||||||||||||||||| ||||| || ||   |||  ||||||| ||||||||||| ||||    
T  31532128 ttagatgaagtggtaatccactgaaattaaactcacacacaactgtgaggtccccggttcaaatccgggtcacaacgtccggccttgcaatttcgaca 31532225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 57 - 168
Target Start/End: Original strand, 7403696 - 7403806
Alignment:
Q  57 tcttagatgaagtcgtaatccacataaattaaactcacacacaactgtgaggtcccgggttcgaacccatatcatgacgtccgaccttgcaattttgaca 156  Q
    ||||||||||||| |||||| ||  ||||||| |||||| |||||||||| ||| ||| ||||||| |   ||| ||||||||||||| |||||||||||    
T  7403696 tcttagatgaagtggtaatc-actgaaattaagctcacaaacaactgtgatgtctcggattcgaactcgagtcacgacgtccgaccttacaattttgaca 7403794  T
Q  157 tttgccagttga 168  Q
    |||| |||||||    
T  7403795 tttggcagttga 7403806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 82 - 160
Target Start/End: Complemental strand, 5385440 - 5385362
Alignment:
Q  82 aaattaaactcacacacaactgtgaggtcccgggttcgaacccatatcatgacgtccgaccttgcaattttgacatttg 160  Q
    ||||||||||||||||||||||||||||||||||||||||||    ||| |||||||  ||||||||||| | ||||||    
T  5385440 aaattaaactcacacacaactgtgaggtcccgggttcgaacctgggtcacgacgtccagccttgcaatttcggcatttg 5385362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 98 - 184
Target Start/End: Complemental strand, 22979690 - 22979604
Alignment:
Q  98 caactgtgaggtcccgggttcgaacccatatcatgacgtccgaccttgcaattttgacatttgccagttgagctagaacttctagac 184  Q
    ||||||||||||||||| || ||||    |||| ||||| ||| |||||||||| ||||||||||||||||||||| ||||||||||    
T  22979690 caactgtgaggtcccggctttgaacttggatcacgacgttcgagcttgcaatttcgacatttgccagttgagctaggacttctagac 22979604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 223 - 350
Target Start/End: Original strand, 25021333 - 25021462
Alignment:
Q  223 caagcaccacatgctcaagattttcttccagctattccaattgatggattaggtcagcatatgtcaccagttgagtaccgtac--tatccttcgatatca 320  Q
    |||||| ||||||||||||||||||||| || ||| |  |||||||| ||| ||||||| |||||||||||  ||||  ||||  ||||||| ||||||     
T  25021333 caagcagcacatgctcaagattttcttctagttatccatattgatgggttaagtcagcacatgtcaccagtgaagtatagtactatatccttagatatcg 25021432  T
Q  321 tcttatgattccactttttcctattgatga 350  Q
     || ||||||||||| |||| |||||||||    
T  25021433 cctcatgattccactatttcatattgatga 25021462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 56 - 124
Target Start/End: Complemental strand, 13891218 - 13891150
Alignment:
Q  56 gtcttagatgaagtcgtaatccacataaattaaactcacacacaactgtgaggtcccgggttcgaaccc 124  Q
    |||||||||||||| |||| ||||  ||| ||||||||||||||||||||||||||  |||||||||||    
T  13891218 gtcttagatgaagtggtaaaccactgaaaataaactcacacacaactgtgaggtcctaggttcgaaccc 13891150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 82 - 185
Target Start/End: Original strand, 41753006 - 41753109
Alignment:
Q  82 aaattaaactcacacacaactgtgaggtcccgggttcgaacccatatcatgacgtccgaccttgcaattttgacatttgccagttgagctagaacttcta 181  Q
    |||||||||| ||||||||||||||| |   |||||||||  |  |||| ||| ||||  |||||||||| |||||||| |||||||||||| |||||||    
T  41753006 aaattaaacttacacacaactgtgagattttgggttcgaattcggatcacgacatccggtcttgcaatttcgacatttgtcagttgagctaggacttcta 41753105  T
Q  182 gact 185  Q
    ||||    
T  41753106 gact 41753109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 223 - 350
Target Start/End: Original strand, 42921661 - 42921788
Alignment:
Q  223 caagcaccacatgctcaagattttcttccagctattccaattgatggattaggtcagcatatgtcaccagttgagtaccgtactatccttcgatatcatc 322  Q
    |||||| |||||||| | |||||||||| ||||||  | | || ||| |||||||||||||| |||  ||| ||||| | ||||||  ||||||||| ||    
T  42921661 caagcaacacatgcttaggattttcttctagctatctcgaatggtgggttaggtcagcatatatcataagtggagtatcatactattattcgatatcgtc 42921760  T
Q  323 ttatgattccactttttcctattgatga 350  Q
    ||||||||||| | |||| |||||||||    
T  42921761 ttatgattccattatttcttattgatga 42921788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 56 - 124
Target Start/End: Original strand, 33731464 - 33731532
Alignment:
Q  56 gtcttagatgaagtcgtaatccacataaattaaactcacacacaactgtgaggtcccgggttcgaaccc 124  Q
    |||||||| ||||| |||| ||||  |||||||||||||||||||||| ||||||||| ||| ||||||    
T  33731464 gtcttagaagaagtggtaaaccactaaaattaaactcacacacaactgggaggtcccgagtttgaaccc 33731532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 39435469 - 39435433
Alignment:
Q  1 ggttgagtctgttcacctttctggacataggctaata 37  Q
    |||||||||||||||||||||||||||||||||||||    
T  39435469 ggttgagtctgttcacctttctggacataggctaata 39435433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 56 - 184
Target Start/End: Original strand, 42364702 - 42364829
Alignment:
Q  56 gtcttagatgaagtcgtaatccacataaattaaactcacacacaactgtgaggtcccgggttcgaacccatatcatgacgtccgaccttgcaattttgac 155  Q
    ||||||||| |||| |||| | ||  |||||||||||||||||||||||||  |  ||| ||| |||||| ||||| ||||| | | ||||||||| | |    
T  42364702 gtcttagataaagtggtaaactactgaaattaaactcacacacaactgtgaaatttcggattcaaaccca-atcataacgtctggctttgcaatttcggc 42364800  T
Q  156 atttgccagttgagctagaacttctagac 184  Q
    ||||| |||||||| ||| ||||||||||    
T  42364801 atttggcagttgagataggacttctagac 42364829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 56 - 145
Target Start/End: Complemental strand, 2907142 - 2907054
Alignment:
Q  56 gtcttagatgaagtcgtaatccacat-aaattaaactcacacacaactgtgaggtcccgggttcgaacccatatcatgacgtccgaccttg 145  Q
    |||||||| ||||| ||||||||| | ||||||||||| || |  ||||||||||||||||||| |||||  |||| ||||||||||||||    
T  2907142 gtcttagacgaagtggtaatccacttgaaattaaactcccata--actgtgaggtcccgggttcaaacccggatcacgacgtccgaccttg 2907054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 59 - 166
Target Start/End: Complemental strand, 40932834 - 40932727
Alignment:
Q  59 ttagatgaagtcgtaatccacataaattaaactcacacacaactgtgaggtcccgggttcgaacccatatcatgacgtccgaccttgcaattttgacatt 158  Q
    ||||||||||| |||||| ||  |||||||| ||||||||||||||||| |  ||| |||||| ||  |||| ||||||| | ||| |||||| ||||||    
T  40932834 ttagatgaagtggtaatctactaaaattaaagtcacacacaactgtgagatttcggattcgaatccggatcacgacgtccaatcttacaatttcgacatt 40932735  T
Q  159 tgccagtt 166  Q
    || |||||    
T  40932734 tgtcagtt 40932727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 223 - 299
Target Start/End: Complemental strand, 36006075 - 36006001
Alignment:
Q  223 caagcaccacatgctcaagattttcttccagctattccaattgatggattaggtcagcatatgtcaccagttgagta 299  Q
    |||||| ||||||||||||||| |  || |||||| |||||| |||| |||||||| |||||||||||||| |||||    
T  36006075 caagcaacacatgctcaagattat--tcaagctatcccaatttatgggttaggtcatcatatgtcaccagtagagta 36006001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 100; Significance: 2e-49; HSPs: 34)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 227 - 350
Target Start/End: Complemental strand, 27337265 - 27337142
Alignment:
Q  227 caccacatgctcaagattttcttccagctattccaattgatggattaggtcagcatatgtcaccagttgagtaccgtactatccttcgatatcatcttat 326  Q
    |||||||||||||||||||||||  |||||| ||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||| ||||||    
T  27337265 caccacatgctcaagattttcttttagctatcccaattgatgggttaggttagcatatgtcaccagttgagtaccgtactatccttcgatatcgtcttat 27337166  T
Q  327 gattccactttttcctattgatga 350  Q
    ||||||||||||||||||||||||    
T  27337165 gattccactttttcctattgatga 27337142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 223 - 350
Target Start/End: Complemental strand, 433868 - 433741
Alignment:
Q  223 caagcaccacatgctcaagattttcttccagctattccaattgatggattaggtcagcatatgtcaccagttgagtaccgtactatccttcgatatcatc 322  Q
    |||||||||||||||||||||||||||| |||||| ||||||||||| ||||| ||||||||||||||| ||||||| || |||||||||||||||| ||    
T  433868 caagcaccacatgctcaagattttcttctagctatcccaattgatgggttaggccagcatatgtcaccaattgagtatcggactatccttcgatatcgtc 433769  T
Q  323 ttatgattccactttttcctattgatga 350  Q
    ||||||||||||||||||||||||||||    
T  433768 ttatgattccactttttcctattgatga 433741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 234 - 350
Target Start/End: Original strand, 25662859 - 25662975
Alignment:
Q  234 tgctcaagattttcttccagctattccaattgatggattaggtcagcatatgtcaccagttgagtaccgtactatccttcgatatcatcttatgattcca 333  Q
    ||||||||||||||||| |||||| ||||||||||| || |||||||||||||||||||| || |||||||||||||||||||||| |||||||||||||    
T  25662859 tgctcaagattttcttctagctatcccaattgatgggttgggtcagcatatgtcaccagtggaataccgtactatccttcgatatcgtcttatgattcca 25662958  T
Q  334 ctttttcctattgatga 350  Q
    || ||||||||||||||    
T  25662959 ctatttcctattgatga 25662975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 56 - 184
Target Start/End: Original strand, 35317697 - 35317825
Alignment:
Q  56 gtcttagatgaagtcgtaatccacataaattaaactcacacacaactgtgaggtcccgggttcgaacccatatcatgacgtccgaccttgcaattttgac 155  Q
    |||||||||||||| |||||||||  ||| ||||||||||||||||||||||||||||||||||| ||||  |||| ||||||||||||||||||| | |    
T  35317697 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaccccaggtcataacgtccgaccttgcaatttcggc 35317796  T
Q  156 atttgccagttgagctagaacttctagac 184  Q
    |||||||||||||||||| ||||||||||    
T  35317797 atttgccagttgagctaggacttctagac 35317825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 59 - 184
Target Start/End: Original strand, 1191543 - 1191668
Alignment:
Q  59 ttagatgaagtcgtaatccacataaattaaactcacacacaactgtgaggtcccgggttcgaacccatatcatgacgtccgaccttgcaattttgacatt 158  Q
    ||||||||||| |||| ||||  ||||||||||||||||||| |||||||||||||||||||||||  |||| |||||||| ||||||||||| | ||||    
T  1191543 ttagatgaagttgtaagccactgaaattaaactcacacacaattgtgaggtcccgggttcgaacccggatcacgacgtccggccttgcaatttcgtcatt 1191642  T
Q  159 tgccagttgagctagaacttctagac 184  Q
    ||||||||||||||| ||||||||||    
T  1191643 tgccagttgagctaggacttctagac 1191668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 56 - 184
Target Start/End: Complemental strand, 13204085 - 13203957
Alignment:
Q  56 gtcttagatgaagtcgtaatccacataaattaaactcacacacaactgtgaggtcccgggttcgaacccatatcatgacgtccgaccttgcaattttgac 155  Q
    |||||||||||||| |||||||||  ||| |||||||||||| ||||||||||||||||||||||||||   ||| |||||||| ||||||||||| | |    
T  13204085 gtcttagatgaagtggtaatccactgaaaataaactcacacataactgtgaggtcccgggttcgaacccgggtcacgacgtccggccttgcaatttcggc 13203986  T
Q  156 atttgccagttgagctagaacttctagac 184  Q
    |||||||||||||||||| ||||||||||    
T  13203985 atttgccagttgagctaggacttctagac 13203957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 56 - 184
Target Start/End: Complemental strand, 21018351 - 21018223
Alignment:
Q  56 gtcttagatgaagtcgtaatccacataaattaaactcacacacaactgtgaggtcccgggttcgaacccatatcatgacgtccgaccttgcaattttgac 155  Q
    |||||||||||||| |||||||||  ||| |||||||||||||||||||||||||||||||||||||||   |||  ||||||| ||| ||||||||| |    
T  21018351 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccgggtcacaacgtccggcctcgcaattttggc 21018252  T
Q  156 atttgccagttgagctagaacttctagac 184  Q
    |||||||||||||||||| ||||||||||    
T  21018251 atttgccagttgagctaggacttctagac 21018223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 223 - 350
Target Start/End: Original strand, 15291554 - 15291681
Alignment:
Q  223 caagcaccacatgctcaagattttcttccagctattccaattgatggattaggtcagcatatgtcaccagttgagtaccgtactatccttcgatatcatc 322  Q
    |||||| |||||||||  |||||||||| |||||| ||||||||||| ||||||||||||||||||||||| ||||| |||||||||||| |||||| ||    
T  15291554 caagcagcacatgctcgggattttcttctagctatcccaattgatgggttaggtcagcatatgtcaccagtggagtatcgtactatccttagatatcgtc 15291653  T
Q  323 ttatgattccactttttcctattgatga 350  Q
     |||||||||||| ||| ||||||||||    
T  15291654 gtatgattccactattttctattgatga 15291681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 56 - 183
Target Start/End: Original strand, 4824939 - 4825066
Alignment:
Q  56 gtcttagatgaagtcgtaatccacataaattaaactcacacacaactgtgaggtcccgggttcgaacccatatcatgacgtccgaccttgcaattttgac 155  Q
    |||||||||||||| ||||||||   ||| |||||||||||||||||||||||||||||||| |||||    |||  ||||||| ||||||||||| | |    
T  4824939 gtcttagatgaagtggtaatccattgaaaataaactcacacacaactgtgaggtcccgggtttgaacctgggtcacaacgtccggccttgcaatttcggc 4825038  T
Q  156 atttgccagttgagctagaacttctaga 183  Q
    |||||||||||||||||| |||||||||    
T  4825039 atttgccagttgagctaggacttctaga 4825066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 56 - 185
Target Start/End: Complemental strand, 12257484 - 12257355
Alignment:
Q  56 gtcttagatgaagtcgtaatccacataaattaaactcacacacaactgtgaggtcccgggttcgaacccatatcatgacgtccgaccttgcaattttgac 155  Q
    |||||||||||||| |||||||||  ||| ||||||||||||||| | |||||||| |||||||||||||  |||  ||||| | |||| |||||| | |    
T  12257484 gtcttagatgaagtggtaatccactgaaaataaactcacacacaattatgaggtcctgggttcgaacccaggtcacaacgtctggccttacaatttcggc 12257385  T
Q  156 atttgccagttgagctagaacttctagact 185  Q
    |||||||||||||||||| |||||||||||    
T  12257384 atttgccagttgagctaggacttctagact 12257355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 56 - 184
Target Start/End: Complemental strand, 2971112 - 2970984
Alignment:
Q  56 gtcttagatgaagtcgtaatccacataaattaaactcacacacaactgtgaggtcccgggttcgaacccatatcatgacgtccgaccttgcaattttgac 155  Q
    |||||||||||||| |||||||||  ||| ||||||||||||||||||||||||| | |||||||||||   |||  ||||| |||||| |||||| |||    
T  2971112 gtcttagatgaagtggtaatccaccgaaaataaactcacacacaactgtgaggtctcaggttcgaacccgggtcacaacgtctgaccttacaatttcgac 2971013  T
Q  156 atttgccagttgagctagaacttctagac 184  Q
    ||||  |||||||||||| ||||||||||    
T  2971012 atttatcagttgagctaggacttctagac 2970984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 56 - 184
Target Start/End: Complemental strand, 11124780 - 11124652
Alignment:
Q  56 gtcttagatgaagtcgtaatccacataaattaaactcacacacaactgtgaggtcccgggttcgaacccatatcatgacgtccgaccttgcaattttgac 155  Q
    |||||||||||||| |||||||||  ||||||||| |||| | || | |||||| | ||||||||| | |  ||| |||||||| |||||||||||||||    
T  11124780 gtcttagatgaagtggtaatccactcaaattaaacccacataaaattatgaggttctgggttcgaatcaaggtcacgacgtccggccttgcaattttgac 11124681  T
Q  156 atttgccagttgagctagaacttctagac 184  Q
    |||||||||||||||||| ||||||||||    
T  11124680 atttgccagttgagctaggacttctagac 11124652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 65 - 184
Target Start/End: Complemental strand, 27721550 - 27721431
Alignment:
Q  65 gaagtcgtaatccacataaattaaactcacacacaactgtgaggtcccgggttcgaacccatatcatgacgtccgaccttgcaattttgacatttgccag 164  Q
    ||||| |||||||||  |||||||| ||||| |||||||||||||||||||||| |||||   ||| |||||||||| ||||||||| | ||||| ||||    
T  27721550 gaagtggtaatccactgaaattaaattcacatacaactgtgaggtcccgggttcaaacccgggtcacgacgtccgactttgcaatttcggcattttccag 27721451  T
Q  165 ttgagctagaacttctagac 184  Q
    ||||||||| ||||||||||    
T  27721450 ttgagctaggacttctagac 27721431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 56 - 151
Target Start/End: Original strand, 31909385 - 31909480
Alignment:
Q  56 gtcttagatgaagtcgtaatccacataaattaaactcacacacaactgtgaggtcccgggttcgaacccatatcatgacgtccgaccttgcaattt 151  Q
    |||||||||||||| |||||||||  ||| |||||||||||||||||||||||||||||||||||||||   |||||||||| | |||||||||||    
T  31909385 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgacgtctggccttgcaattt 31909480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 82 - 184
Target Start/End: Original strand, 9576987 - 9577089
Alignment:
Q  82 aaattaaactcacacacaactgtgaggtcccgggttcgaacccatatcatgacgtccgaccttgcaattttgacatttgccagttgagctagaacttcta 181  Q
    |||||||||||||| ||||||||||||| | |||||||||||||  |||||||||| | |||||||||||   ||||||||||||||||||| |||||||    
T  9576987 aaattaaactcacatacaactgtgaggttctgggttcgaacccaggtcatgacgtctggccttgcaatttcagcatttgccagttgagctaggacttcta 9577086  T
Q  182 gac 184  Q
    |||    
T  9577087 gac 9577089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 56 - 186
Target Start/End: Complemental strand, 29266003 - 29265873
Alignment:
Q  56 gtcttagatgaagtcgtaatccacataaattaaactcacacacaactgtgaggtcccgggttcgaacccatatcatgacgtccgaccttgcaattttgac 155  Q
    |||||||||||||| |||||||||  ||| |||||||||||||||||||||||||||||||||||| ||   |||  || | |||||||| ||||| |||    
T  29266003 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaatccgggtcacaacattcgaccttgtaatttcgac 29265904  T
Q  156 atttgccagttgagctagaacttctagactg 186  Q
    |||| | ||||||| ||| ||||||||||||    
T  29265903 attttctagttgagttaggacttctagactg 29265873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 59 - 183
Target Start/End: Original strand, 17984745 - 17984869
Alignment:
Q  59 ttagatgaagtcgtaatccacataaattaaactcacacacaactgtgaggtcccgggttcgaacccatatcatgacgtccgaccttgcaattttgacatt 158  Q
    |||||||||||  ||| ||||  |||||||||||||||||||||||||||| ||||||||||||||   ||| ||||||| | |||||||||| ||| ||    
T  17984745 ttagatgaagtgataagccactaaaattaaactcacacacaactgtgaggttccgggttcgaacccgagtcaggacgtccaatcttgcaatttcgacctt 17984844  T
Q  159 tgccagttgagctagaacttctaga 183  Q
    |  |||||||||||| |||||||||    
T  17984845 tttcagttgagctaggacttctaga 17984869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 224 - 350
Target Start/End: Original strand, 3113698 - 3113824
Alignment:
Q  224 aagcaccacatgctcaagattttcttccagctattccaattgatggattaggtcagcatatgtcaccagttgagtaccgtactatccttcgatatcatct 323  Q
    ||||| ||||||||||||||||||| | |||||| || |||||||  ||||||||||||| ||||  ||| ||||| |||||||||||| |||||   ||    
T  3113698 aagcagcacatgctcaagattttctcctagctatcccgattgatgatttaggtcagcataggtcattagtggagtatcgtactatccttagatattgcct 3113797  T
Q  324 tatgattccactttttcctattgatga 350  Q
    |||||||||||| | ||||||||||||    
T  3113798 tatgattccactatctcctattgatga 3113824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 59 - 181
Target Start/End: Complemental strand, 6021117 - 6020995
Alignment:
Q  59 ttagatgaagtcgtaatccacataaattaaactcacacacaactgtgaggtcccgggttcgaacccatatcatgacgtccgaccttgcaattttgacatt 158  Q
    |||||| |||| |||||||||  ||| |||||||||||||||||| ||||||||||||||||| ||   |||  ||||| | ||||||||||||||||||    
T  6021117 ttagataaagtggtaatccactgaaaataaactcacacacaactgagaggtcccgggttcgaatccgggtcacaacgtcaggccttgcaattttgacatt 6021018  T
Q  159 tgccagttgagctagaacttcta 181  Q
    ||||| ||||| ||| |||||||    
T  6021017 tgccaattgagttaggacttcta 6020995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 56 - 180
Target Start/End: Complemental strand, 8734125 - 8734000
Alignment:
Q  56 gtcttagatgaagtcgtaatccacataaattaaa-ctcacacacaactgtgaggtcccgggttcgaacccatatcatgacgtccgaccttgcaattttga 154  Q
    |||||||||||||| |||||||||  || ||||| |||||  ||||||||||||| ||||||||||||| |  ||| |||||||| |||||||||||       
T  8734125 gtcttagatgaagtggtaatccactgaagttaaaactcacgtacaactgtgaggttccgggttcgaacctaggtcacgacgtccggccttgcaatttcag 8734026  T
Q  155 catttgccagttgagctagaacttct 180  Q
    ||||||||||||||||||| ||||||    
T  8734025 catttgccagttgagctaggacttct 8734000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 59 - 184
Target Start/End: Complemental strand, 40177749 - 40177624
Alignment:
Q  59 ttagatgaagtcgtaatccacataaattaaactcacacacaactgtgaggtcccgggttcgaacccatatcatgacgtccgaccttgcaattttgacatt 158  Q
    ||||||||||| |||||||||  ||| |||||||||||||||| |||| || ||||||| ||| |||  |||  ||||||| ||||||||||| ||||||    
T  40177749 ttagatgaagtggtaatccactgaaaataaactcacacacaacggtgaagttccgggttggaatccaggtcacaacgtccggccttgcaatttcgacatt 40177650  T
Q  159 tgccagttgagctagaacttctagac 184  Q
    || ||||| |||||| ||||||||||    
T  40177649 tgtcagttaagctaggacttctagac 40177624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 56 - 184
Target Start/End: Complemental strand, 21112177 - 21112049
Alignment:
Q  56 gtcttagatgaagtcgtaatccacataaattaaactcacacacaactgtgaggtcccgggttcgaacccatatcatgacgtccgaccttgcaattttgac 155  Q
    ||||||||||| || |||||||||  ||| |||||||| |||||||| ||||||||| |||||||||| |  ||| |||||  | ||||||||||| |||    
T  21112177 gtcttagatgatgtggtaatccactgaaaataaactcaaacacaactttgaggtcccaggttcgaacctaggtcacgacgtatgtccttgcaatttcgac 21112078  T
Q  156 atttgccagttgagctagaacttctagac 184  Q
    ||||| ||| |||||||| ||||||||||    
T  21112077 atttgtcagctgagctaggacttctagac 21112049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 56 - 184
Target Start/End: Complemental strand, 35546061 - 35545933
Alignment:
Q  56 gtcttagatgaagtcgtaatccacataaattaaactcacacacaactgtgaggtcccgggttcgaacccatatcatgacgtccgaccttgcaattttgac 155  Q
    ||||||||||||||  |||||||| |||||||||| |||| |||||||||||||||| ||||||||  |  |||| ||||| ||   ||||||||| | |    
T  35546061 gtcttagatgaagtgataatccacttaaattaaacccacatacaactgtgaggtcccaggttcgaattcggatcacgacgttcggttttgcaatttcggc 35545962  T
Q  156 atttgccagttgagctagaacttctagac 184  Q
    ||||| |||||||| ||||||||||||||    
T  35545961 atttgtcagttgagttagaacttctagac 35545933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 56 - 184
Target Start/End: Complemental strand, 2786398 - 2786271
Alignment:
Q  56 gtcttagatgaagtcgtaatccacataaattaaactcacacacaactgtgaggtcccgggttcgaacccatatcatgacgtccgaccttgcaattttgac 155  Q
    |||||||||||||| ||||||||| | ||||||||||| |||||||||||||||||| |||| |||  |  |||| | ||||||||||| |||||| | |    
T  2786398 gtcttagatgaagtggtaatccac-tgaattaaactcatacacaactgtgaggtcccaggtttgaattcggatcacggcgtccgaccttacaatttcggc 2786300  T
Q  156 atttgccagttgagctagaacttctagac 184  Q
    |||||||| ||||  ||| ||||||||||    
T  2786299 atttgccaattgaattaggacttctagac 2786271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 56 - 185
Target Start/End: Original strand, 32143414 - 32143531
Alignment:
Q  56 gtcttagatgaagtcgtaatccacataaattaaactcacacacaactgtgaggtcccgggttcgaacccatatcatgacgtccgaccttgcaattttgac 155  Q
    |||||||||||||| |||||||||  ||| ||||||||||||||||||||||||||||||            |||  ||||||| ||||||||||||| |    
T  32143414 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccggg------------tcacaacgtccggccttgcaattttggc 32143501  T
Q  156 atttgccagttgagctagaacttctagact 185  Q
    |||||||||||||||||  |||||||||||    
T  32143502 atttgccagttgagctatgacttctagact 32143531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 57 - 184
Target Start/End: Original strand, 3386894 - 3387028
Alignment:
Q  57 tcttagatgaagtcgtaatccacataaattaaactcacacacaactgtgaggtcccg-------ggttcgaacccatatcatgacgtccgaccttgcaat 149  Q
    ||||||| ||||| |||||||||  |||||||| |||||||||||| |||||| |||       |||||||||||  || | |||||||| |||||||||    
T  3386894 tcttagaagaagtggtaatccactgaaattaaattcacacacaactttgaggttccgacttccgggttcgaacccggataacgacgtccggccttgcaat 3386993  T
Q  150 tttgacatttgccagttgagctagaacttctagac 184  Q
    || | |||||||||||||| |||| |||| |||||    
T  3386994 ttcggcatttgccagttgaactaggacttttagac 3387028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 230 - 350
Target Start/End: Original strand, 32269331 - 32269451
Alignment:
Q  230 cacatgctcaagattttcttccagctattccaattgatggattaggtcagcatatgtcaccagttgagtaccgtactatccttcgatatcatcttatgat 329  Q
    ||||||||||  ||||||||  |||||| |  |||||||| ||||||||| |||||| || |||  ||||   |||||||||| |||||  |||||||||    
T  32269331 cacatgctcagaattttcttttagctatcctgattgatgggttaggtcaggatatgttactagtgaagtattatactatccttggatattgtcttatgat 32269430  T
Q  330 tccactttttcctattgatga 350  Q
    |||||| ||| ||||||||||    
T  32269431 tccactattttctattgatga 32269451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 56 - 122
Target Start/End: Complemental strand, 23262672 - 23262606
Alignment:
Q  56 gtcttagatgaagtcgtaatccacataaattaaactcacacacaactgtgaggtcccgggttcgaac 122  Q
    |||||||||||||| |||||||||  ||| ||||||||||||||||||| |||| |  |||||||||    
T  23262672 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtaaggttctaggttcgaac 23262606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 241 - 350
Target Start/End: Original strand, 26212132 - 26212241
Alignment:
Q  241 gattttcttccagctattccaattgatggattaggtcagcatatgtcaccagttgagtaccgtactatccttcgatatcatcttatgattccactttttc 340  Q
    |||||||||| |||||||   ||||||||||||||||| | | ||||||||||  |||| ||||||  |||| ||||||   |||||||| || | ||||    
T  26212132 gattttcttctagctattttgattgatggattaggtcatcttttgtcaccagtgaagtatcgtactgaccttagatatcgctttatgatttcattatttc 26212231  T
Q  341 ctattgatga 350  Q
    ||||||||||    
T  26212232 ctattgatga 26212241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 56 - 106
Target Start/End: Complemental strand, 19181838 - 19181789
Alignment:
Q  56 gtcttagatgaagtcgtaatccacataaattaaactcacacacaactgtga 106  Q
    |||||| ||||||| |||||||||  |||||||||||||||||||||||||    
T  19181838 gtcttaaatgaagt-gtaatccactgaaattaaactcacacacaactgtga 19181789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 56 - 186
Target Start/End: Original strand, 28591350 - 28591480
Alignment:
Q  56 gtcttagatgaagtcgtaatccacataaattaaactcacacacaactgtgaggtcccgggttcgaacccatatcatgacgtccgaccttgcaattttgac 155  Q
    |||| ||||||||| |||| ||||  | |||||||||| |||||||||||||||  | |||| ||||||   |||  ||||||| |||||||||||        
T  28591350 gtctaagatgaagtggtaaaccactgacattaaactcatacacaactgtgaggtttcaggtttgaacccgagtcactacgtccggccttgcaatttcagt 28591449  T
Q  156 atttgccagttgagctagaacttctagactg 186  Q
    ||||||||||| || ||| ||||||| ||||    
T  28591450 atttgccagtttagttaggacttctaaactg 28591480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 278 - 348
Target Start/End: Complemental strand, 35456283 - 35456213
Alignment:
Q  278 agcatatgtcaccagttgagtaccgtactatccttcgatatcatcttatgattccactttttcctattgat 348  Q
    |||||||||||| |   ||||||| |||||||||| ||||||| |||||||||||||| |||  |||||||    
T  35456283 agcatatgtcacaaacggagtaccatactatccttagatatcaccttatgattccactattttatattgat 35456213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 138 - 174
Target Start/End: Complemental strand, 4842530 - 4842494
Alignment:
Q  138 cgaccttgcaattttgacatttgccagttgagctaga 174  Q
    ||||||||||||||| ||||||| |||||||||||||    
T  4842530 cgaccttgcaattttaacatttgtcagttgagctaga 4842494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 59 - 123
Target Start/End: Original strand, 41580078 - 41580142
Alignment:
Q  59 ttagatgaagtcgtaatccacataaattaaactcacacacaactgtgaggtcccgggttcgaacc 123  Q
    ||||||||||| ||||||||   |||||||||  |||||||||||||||||  ||| ||||||||    
T  41580078 ttagatgaagtggtaatccattaaaattaaacctacacacaactgtgaggtttcggattcgaacc 41580142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 92; Significance: 1e-44; HSPs: 61)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 223 - 350
Target Start/End: Complemental strand, 5827830 - 5827703
Alignment:
Q  223 caagcaccacatgctcaagattttcttccagctattccaattgatggattaggtcagcatatgtcaccagttgagtaccgtactatccttcgatatcatc 322  Q
    |||||| ||||||||||| ||||||||| |||||| ||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||| ||    
T  5827830 caagcagcacatgctcaaaattttcttctagctatcccaattgatgggttaggtcagcatatgtcaccagtggagtaccgtactatccttcgatatcgtc 5827731  T
Q  323 ttatgattccactttttcctattgatga 350  Q
    ||||||||||||| |||| |||||||||    
T  5827730 ttatgattccactatttcttattgatga 5827703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 56 - 184
Target Start/End: Original strand, 25112247 - 25112375
Alignment:
Q  56 gtcttagatgaagtcgtaatccacataaattaaactcacacacaactgtgaggtcccgggttcgaacccatatcatgacgtccgaccttgcaattttgac 155  Q
    |||||||||||||| |||||||||  ||| ||||| ||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||| |      
T  25112247 gtcttagatgaagtggtaatccactgaaaataaacccacacacaactgtgaggtcccgggttcgaacccaggtcatgacgtccgaccttgcaatttcggt 25112346  T
Q  156 atttgccagttgagctagaacttctagac 184  Q
    |||||||||||||||||| ||||||||||    
T  25112347 atttgccagttgagctaggacttctagac 25112375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 56 - 185
Target Start/End: Complemental strand, 11355951 - 11355822
Alignment:
Q  56 gtcttagatgaagtcgtaatccacataaattaaactcacacacaactgtgaggtcccgggttcgaacccatatcatgacgtccgaccttgcaattttgac 155  Q
    |||||||||||||| |||||||||  |||||||||||||||||||||||||| ||||||||||||| ||| ||||| ||||||||||||||||||| | |    
T  11355951 gtcttagatgaagtggtaatccactgaaattaaactcacacacaactgtgagatcccgggttcgaatccagatcataacgtccgaccttgcaatttcggc 11355852  T
Q  156 atttgccagttgagctagaacttctagact 185  Q
    |||||  |||||| ||||||||||||||||    
T  11355851 atttgttagttgaactagaacttctagact 11355822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 56 - 184
Target Start/End: Complemental strand, 4106866 - 4106738
Alignment:
Q  56 gtcttagatgaagtcgtaatccacataaattaaactcacacacaactgtgaggtcccgggttcgaacccatatcatgacgtccgaccttgcaattttgac 155  Q
    |||||||||||||| |||||||||  ||| |||||||||||||||||||||||||||||||||||||||   |||||||||||| ||||||||||| | |    
T  4106866 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgacgtccggccttgcaatttcggc 4106767  T
Q  156 atttgccagttgagctagaacttctagac 184  Q
    |||||||||||| ||||| ||||||||||    
T  4106766 atttgccagttgggctaggacttctagac 4106738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 56 - 184
Target Start/End: Original strand, 31770532 - 31770660
Alignment:
Q  56 gtcttagatgaagtcgtaatccacataaattaaactcacacacaactgtgaggtcccgggttcgaacccatatcatgacgtccgaccttgcaattttgac 155  Q
    |||||||||||||| |||||||||  ||| |||||||||||||||||||||||||||||||||||||||   ||||||| |||| ||||||||||| | |    
T  31770532 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgacatccggccttgcaatttcggc 31770631  T
Q  156 atttgccagttgagctagaacttctagac 184  Q
    |||||||||||||||||| ||||||||||    
T  31770632 atttgccagttgagctaggacttctagac 31770660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 59 - 184
Target Start/End: Complemental strand, 44084065 - 44083940
Alignment:
Q  59 ttagatgaagtcgtaatccacataaattaaactcacacacaactgtgaggtcccgggttcgaacccatatcatgacgtccgaccttgcaattttgacatt 158  Q
    ||||||||||| |||||||||  ||| |||||||||||||||||||||||||||||||||||||||   |||  ||||||| ||||||||||||| ||||    
T  44084065 ttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccgggtcacaacgtccggccttgcaattttggcatt 44083966  T
Q  159 tgccagttgagctagaacttctagac 184  Q
    ||||||||||||||| ||||||||||    
T  44083965 tgccagttgagctaggacttctagac 44083940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 56 - 184
Target Start/End: Original strand, 25546275 - 25546403
Alignment:
Q  56 gtcttagatgaagtcgtaatccacataaattaaactcacacacaactgtgaggtcccgggttcgaacccatatcatgacgtccgaccttgcaattttgac 155  Q
    |||||||||||||| |||| ||||  ||||||||||||||||||||||||||||||||| |||||||||   |||||||||||| ||||||||||| | |    
T  25546275 gtcttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccggattcgaacccgggtcatgacgtccggccttgcaatttcggc 25546374  T
Q  156 atttgccagttgagctagaacttctagac 184  Q
    |||| ||||||||||||| ||||||||||    
T  25546375 atttaccagttgagctaggacttctagac 25546403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 56 - 185
Target Start/End: Complemental strand, 40058366 - 40058237
Alignment:
Q  56 gtcttagatgaagtcgtaatccacataaattaaactcacacacaactgtgaggtcccgggttcgaacccatatcatgacgtccgaccttgcaattttgac 155  Q
    |||||||||||||| |||||||||  ||| |||||||| ||||||||||||||||||||||||||||||   |||  ||||||| ||||||||||||| |    
T  40058366 gtcttagatgaagtggtaatccactgaaaataaactcatacacaactgtgaggtcccgggttcgaacccgggtcacaacgtccggccttgcaattttggc 40058267  T
Q  156 atttgccagttgagctagaacttctagact 185  Q
    |||||||||||||| ||| |||||||||||    
T  40058266 atttgccagttgagttaggacttctagact 40058237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 56 - 184
Target Start/End: Complemental strand, 23358313 - 23358185
Alignment:
Q  56 gtcttagatgaagtcgtaatccacataaattaaactcacacacaactgtgaggtcccgggttcgaacccatatcatgacgtccgaccttgcaattttgac 155  Q
    |||||||||||||| |||||||||  ||| |||||||||||||||||||||||||||||||||||||||   | | |||||||| ||||||||||| |      
T  23358313 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccgggttacgacgtccggccttgcaatttcggt 23358214  T
Q  156 atttgccagttgagctagaacttctagac 184  Q
    |||||||||||||||||| ||||||||||    
T  23358213 atttgccagttgagctaggacttctagac 23358185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 56 - 169
Target Start/End: Complemental strand, 4107437 - 4107324
Alignment:
Q  56 gtcttagatgaagtcgtaatccacataaattaaactcacacacaactgtgaggtcccgggttcgaacccatatcatgacgtccgaccttgcaattttgac 155  Q
    |||||||||||||| |||||||||  ||| |||||||||||||||||||||||||||||||||||||||   || ||||||||| ||||||||||| | |    
T  4107437 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccgggtcgtgacgtccggccttgcaatttcggc 4107338  T
Q  156 atttgccagttgag 169  Q
    ||||||||||||||    
T  4107337 atttgccagttgag 4107324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 56 - 173
Target Start/End: Original strand, 29484755 - 29484872
Alignment:
Q  56 gtcttagatgaagtcgtaatccacataaattaaactcacacacaactgtgaggtcccgggttcgaacccatatcatgacgtccgaccttgcaattttgac 155  Q
    |||||| |||||||  ||||||||  |||||||||||||| |||| ||||||||||||||||| |||||| ||||||||||||| ||||||||||| | |    
T  29484755 gtcttatatgaagtgataatccactgaaattaaactcacatacaattgtgaggtcccgggttcaaacccagatcatgacgtccggccttgcaatttcggc 29484854  T
Q  156 atttgccagttgagctag 173  Q
    ||||||||||||||||||    
T  29484855 atttgccagttgagctag 29484872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 56 - 183
Target Start/End: Original strand, 47250251 - 47250378
Alignment:
Q  56 gtcttagatgaagtcgtaatccacataaattaaactcacacacaactgtgaggtcccgggttcgaacccatatcatgacgtccgaccttgcaattttgac 155  Q
    |||||||||||||| |||||||||  ||| |||||||||||||||||  ||| |||| |||||||||||   |||||||||||| ||||||||||| | |    
T  47250251 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactaagagatcccaggttcgaacccgggtcatgacgtccggccttgcaatttcggc 47250350  T
Q  156 atttgccagttgagctagaacttctaga 183  Q
    |||||||||||||||||| |||||||||    
T  47250351 atttgccagttgagctaggacttctaga 47250378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 56 - 181
Target Start/End: Complemental strand, 8439206 - 8439081
Alignment:
Q  56 gtcttagatgaagtcgtaatccacataaattaaactcacacacaactgtgaggtcccgggttcgaacccatatcatgacgtccgaccttgcaattttgac 155  Q
    |||||||||||||| |||||||||  ||| |||| ||||||||||||||||||||| ||||||||| ||   |||  ||||||||||||||||||||| |    
T  8439206 gtcttagatgaagtggtaatccactgaaaataaattcacacacaactgtgaggtcctgggttcgaatccgggtcacaacgtccgaccttgcaattttggc 8439107  T
Q  156 atttgccagttgagctagaacttcta 181  Q
    ||||||||||||| |||| |||||||    
T  8439106 atttgccagttgaactaggacttcta 8439081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 63 - 178
Target Start/End: Original strand, 27229484 - 27229600
Alignment:
Q  63 atgaagtcgtaatccacataaattaaa-ctcacacacaactgtgaggtcccgggttcgaacccatatcatgacgtccgaccttgcaattttgacatttgc 161  Q
    ||||||| |||||||||  |||||||| ||||||||||||||||||||||||||||||||||||  ||| |||||||| ||||||||||| ||||||||     
T  27229484 atgaagtggtaatccactgaaattaaaactcacacacaactgtgaggtcccgggttcgaacccaggtcacgacgtccggccttgcaatttcgacatttgt 27229583  T
Q  162 cagttgagctagaactt 178  Q
    |||||||| ||| ||||    
T  27229584 cagttgagttaggactt 27229600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 57 - 180
Target Start/End: Original strand, 43753754 - 43753878
Alignment:
Q  57 tcttagatgaagtcgtaatccacataaattaaa-ctcacacacaactgtgaggtcccgggttcgaacccatatcatgacgtccgaccttgcaattttgac 155  Q
    ||||||||||||| |||||||||  |||||||| |||||| ||||||||||||| |||||||||||||||  ||| |||||||| ||||||||||| | |    
T  43753754 tcttagatgaagtggtaatccactgaaattaaaactcacatacaactgtgaggttccgggttcgaacccaggtcacgacgtccggccttgcaatttcggc 43753853  T
Q  156 atttgccagttgagctagaacttct 180  Q
    ||||||||||||| |||| ||||||    
T  43753854 atttgccagttgaactaggacttct 43753878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 56 - 184
Target Start/End: Complemental strand, 47557909 - 47557781
Alignment:
Q  56 gtcttagatgaagtcgtaatccacataaattaaactcacacacaactgtgaggtcccgggttcgaacccatatcatgacgtccgaccttgcaattttgac 155  Q
    |||||||||||||| |||| ||||  |||||||||||||| ||||||||||||| ||||||||||||||   ||||||||| |||||||| ||||| | |    
T  47557909 gtcttagatgaagtggtaaaccactgaaattaaactcacatacaactgtgaggttccgggttcgaacccgggtcatgacgtgcgaccttgtaatttcggc 47557810  T
Q  156 atttgccagttgagctagaacttctagac 184  Q
    |||| ||||||||| ||| ||||||||||    
T  47557809 atttaccagttgagttaggacttctagac 47557781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 82 - 184
Target Start/End: Complemental strand, 46427462 - 46427360
Alignment:
Q  82 aaattaaactcacacacaactgtgaggtcccgggttcgaacccatatcatgacgtccgaccttgcaattttgacatttgccagttgagctagaacttcta 181  Q
    |||||||||||||||||||||||||||| |||| |||||| ||   ||||||||||| ||||||||||||||| ||||| ||||||||||||||||| ||    
T  46427462 aaattaaactcacacacaactgtgaggttccggattcgaatccgagtcatgacgtccaaccttgcaattttgatatttgtcagttgagctagaactttta 46427363  T
Q  182 gac 184  Q
    |||    
T  46427362 gac 46427360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 56 - 184
Target Start/End: Complemental strand, 2146764 - 2146636
Alignment:
Q  56 gtcttagatgaagtcgtaatccacataaattaaactcacacacaactgtgaggtcccgggttcgaacccatatcatgacgtccgaccttgcaattttgac 155  Q
    |||||||||||||| |||||||||  ||| ||||| |||||||||||||||||||  ||||||||||||   |||  ||||||| ||||||||||| | |    
T  2146764 gtcttagatgaagtggtaatccactgaaaataaacccacacacaactgtgaggtcttgggttcgaacccgggtcacaacgtccggccttgcaatttcggc 2146665  T
Q  156 atttgccagttgagctagaacttctagac 184  Q
    |||| ||||||||||||| ||||||||||    
T  2146664 attttccagttgagctaggacttctagac 2146636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 60 - 184
Target Start/End: Complemental strand, 38033853 - 38033729
Alignment:
Q  60 tagatgaagtcgtaatccacataaattaaactcacacacaactgtgaggtcccgggttcgaacccatatcatgacgtccgaccttgcaattttgacattt 159  Q
    |||||||||| ||| |||||  ||| ||||||||||||||||||||||||||||| || ||||||  ||||  | |||||||||| |||||| | |||||    
T  38033853 tagatgaagtggtactccactgaaaataaactcacacacaactgtgaggtcccggatttgaacccggatcacaatgtccgaccttacaatttcggcattt 38033754  T
Q  160 gccagttgagctagaacttctagac 184  Q
    |||||||||| ||||||||||||||    
T  38033753 gccagttgagttagaacttctagac 38033729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 56 - 151
Target Start/End: Original strand, 47570718 - 47570813
Alignment:
Q  56 gtcttagatgaagtcgtaatccacataaattaaactcacacacaactgtgaggtcccgggttcgaacccatatcatgacgtccgaccttgcaattt 151  Q
    |||||||||||||| |||||||||  ||| |||||||||||||||||||||| ||||||||||||||||   |||||||||||| |||||||||||    
T  47570718 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgagatcccgggttcgaacccgggtcatgacgtccggccttgcaattt 47570813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 83 - 185
Target Start/End: Complemental strand, 29255817 - 29255716
Alignment:
Q  83 aattaaactcacacacaactgtgaggtcccgggttcgaacccatatcatgacgtccgaccttgcaattttgacatttgccagttgagctagaacttctag 182  Q
    |||||||||||| || |||||| || ||| ||||||||||||  |||| ||||||| |||||||||||||| ||||||||||||||||||||||||||||    
T  29255817 aattaaactcacgca-aactgtaagatcctgggttcgaacccggatcacgacgtccaaccttgcaattttggcatttgccagttgagctagaacttctag 29255719  T
Q  183 act 185  Q
    |||    
T  29255718 act 29255716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 56 - 184
Target Start/End: Original strand, 10220473 - 10220600
Alignment:
Q  56 gtcttagatgaagtcgtaatccacataaattaaactcacacacaactgtgaggtcccgggttcgaacccatatcatgacgtccgaccttgcaattttgac 155  Q
    |||||||||||| | |||| ||||  |||||||||||||||| |||||||||||  ||| |||||||||| ||||||||||||  |||| |||||||| |    
T  10220473 gtcttagatgaa-tggtaaaccactgaaattaaactcacacaaaactgtgaggtttcggattcgaacccagatcatgacgtcctgccttacaattttggc 10220571  T
Q  156 atttgccagttgagctagaacttctagac 184  Q
     ||||||||||||| ||| ||||||||||    
T  10220572 ttttgccagttgagttaggacttctagac 10220600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 56 - 183
Target Start/End: Complemental strand, 48146881 - 48146754
Alignment:
Q  56 gtcttagatgaagtcgtaatccacataaattaaactcacacacaactgtgaggtcccgggttcgaacccatatcatgacgtccgaccttgcaattttgac 155  Q
    |||||||||||||| ||||||||   ||| | |||||||||||||||||||||||||||||||||||||   ||| ||| || |||||||||||||   |    
T  48146881 gtcttagatgaagtggtaatccaatgaaaattaactcacacacaactgtgaggtcccgggttcgaacccgggtcacgacatctgaccttgcaatttctgc 48146782  T
Q  156 atttgccagttgagctagaacttctaga 183  Q
    ||||  ||||||||||||||| ||||||    
T  48146781 atttttcagttgagctagaacctctaga 48146754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 56 - 174
Target Start/End: Complemental strand, 5587408 - 5587290
Alignment:
Q  56 gtcttagatgaagtcgtaatccacataaattaaactcacacacaactgtgaggtcccgggttcgaacccatatcatgacgtccgaccttgcaattttgac 155  Q
    |||||||||||||| |||||||||  |||||||||||||||  || |||||||||| ||||||||||||  |||| || |||||  |||||||||| | |    
T  5587408 gtcttagatgaagtggtaatccactaaaattaaactcacacgtaaatgtgaggtcctgggttcgaacccggatcacgatgtccggacttgcaatttcggc 5587309  T
Q  156 atttgccagttgagctaga 174  Q
    ||||| |||||||||||||    
T  5587308 atttgtcagttgagctaga 5587290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 56 - 174
Target Start/End: Complemental strand, 5592369 - 5592251
Alignment:
Q  56 gtcttagatgaagtcgtaatccacataaattaaactcacacacaactgtgaggtcccgggttcgaacccatatcatgacgtccgaccttgcaattttgac 155  Q
    |||||||||||||| |||||||||  |||||||||||||||  || |||||||||| ||||||||||||  |||| || |||||  |||||||||| | |    
T  5592369 gtcttagatgaagtggtaatccactaaaattaaactcacacgtaaatgtgaggtcctgggttcgaacccggatcacgatgtccggacttgcaatttcggc 5592270  T
Q  156 atttgccagttgagctaga 174  Q
    ||||| |||||||||||||    
T  5592269 atttgtcagttgagctaga 5592251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 236 - 350
Target Start/End: Complemental strand, 32585710 - 32585596
Alignment:
Q  236 ctcaagattttcttccagctattccaattgatggattaggtcagcatatgtcaccagttgagtaccgtactatccttcgatatcatcttatgattccact 335  Q
    |||| ||||||||||  ||||| |  |||||||||||| ||||||||||||||||| |  ||||||||||||||||| ||| || |||||||||||||||    
T  32585710 ctcatgattttcttctggctatcctgattgatggattatgtcagcatatgtcaccaatgaagtaccgtactatccttagatttcgtcttatgattccact 32585611  T
Q  336 ttttcctattgatga 350  Q
     ||||||||| ||||    
T  32585610 atttcctattaatga 32585596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 82 - 184
Target Start/End: Original strand, 47960981 - 47961083
Alignment:
Q  82 aaattaaactcacacacaactgtgaggtcccgggttcgaacccatatcatgacgtccgaccttgcaattttgacatttgccagttgagctagaacttcta 181  Q
    |||||||||||||||||||||  ||||||||||||||||||||   |||||||||| ||||||| ||||||| ||||||| ||||||| ||  |||||||    
T  47960981 aaattaaactcacacacaactacgaggtcccgggttcgaacccggttcatgacgtctgaccttgtaattttggcatttgcaagttgagttaagacttcta 47961080  T
Q  182 gac 184  Q
    |||    
T  47961081 gac 47961083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 56 - 184
Target Start/End: Original strand, 48444152 - 48444280
Alignment:
Q  56 gtcttagatgaagtcgtaatccacataaattaaactcacacacaactgtgaggtcccgggttcgaacccatatcatgacgtccgaccttgcaattttgac 155  Q
    |||||||||||||| ||||| |||  |||||||||| |||||||||||||| || | ||||||||||||| |||| |||||||   ||| |||||| | |    
T  48444152 gtcttagatgaagtggtaattcactgaaattaaacttacacacaactgtgaagtacagggttcgaacccagatcacgacgtccagtcttacaatttcggc 48444251  T
Q  156 atttgccagttgagctagaacttctagac 184  Q
    ||||  |||||||||||| ||||||||||    
T  48444252 atttttcagttgagctaggacttctagac 48444280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 56 - 166
Target Start/End: Complemental strand, 41183943 - 41183833
Alignment:
Q  56 gtcttagatgaagtcgtaatccacataaattaaactcacacacaactgtgaggtcccgggttcgaacccatatcatgacgtccgaccttgcaattttgac 155  Q
    ||||||||||||||  ||||||||  ||| |||||||||||| |||||||||||   |||||||||||||  ||| |||||||| ||||||||||| | |    
T  41183943 gtcttagatgaagtgataatccactgaaaataaactcacacataactgtgaggtattgggttcgaacccaggtcaagacgtccggccttgcaatttcggc 41183844  T
Q  156 atttgccagtt 166  Q
    |||||||||||    
T  41183843 atttgccagtt 41183833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 56 - 184
Target Start/End: Original strand, 7162790 - 7162916
Alignment:
Q  56 gtcttagatgaagtcgtaatccacataaattaaactcacacacaactgtgaggtcccgggttcgaacccatatcatgacgtccgaccttgcaattttgac 155  Q
    |||||||||||||| |||||||||  ||| ||||||||||||  | |||||||||||| ||||||||||   |||  ||||||| |||| |||||| | |    
T  7162790 gtcttagatgaagtggtaatccactgaaaataaactcacaca--attgtgaggtcccgagttcgaacccgggtcacaacgtccggccttacaatttcggc 7162887  T
Q  156 atttgccagttgagctagaacttctagac 184  Q
    |||||||||||||||||| |||| |||||    
T  7162888 atttgccagttgagctaggacttttagac 7162916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 56 - 169
Target Start/End: Complemental strand, 28603139 - 28603026
Alignment:
Q  56 gtcttagatgaagtcgtaatccacataaattaaactcacacacaactgtgaggtcccgggttcgaacccatatcatgacgtccgaccttgcaattttgac 155  Q
    |||||||||||||| |||||||||  | |||||||||||| |||| ||||| ||| ||||||||||| ||  ||| |||||||| |||||| |||| | |    
T  28603139 gtcttagatgaagtggtaatccactgagattaaactcacatacaattgtgaagtctcgggttcgaactcaggtcacgacgtccggccttgcgatttcggc 28603040  T
Q  156 atttgccagttgag 169  Q
    ||||||||||||||    
T  28603039 atttgccagttgag 28603026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 56 - 121
Target Start/End: Original strand, 38781208 - 38781273
Alignment:
Q  56 gtcttagatgaagtcgtaatccacataaattaaactcacacacaactgtgaggtcccgggttcgaa 121  Q
    |||||||||||||| |||||||||  ||| ||||||||||||||||||||||||||||||||||||    
T  38781208 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaa 38781273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 56 - 184
Target Start/End: Original strand, 5772819 - 5772947
Alignment:
Q  56 gtcttagatgaagtcgtaatccacataaattaaactcacacacaactgtgaggtcccgggttcgaacccatatcatgacgtccgaccttgcaattttgac 155  Q
    |||||| ||||||| |||| ||||  ||||||||||||||||||||||||||||  || ||||||||||   |||    ||||||||||||||||| | |    
T  5772819 gtcttaaatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtttcgagttcgaacccgggtcacattgtccgaccttgcaatttcggc 5772918  T
Q  156 atttgccagttgagctagaacttctagac 184  Q
    ||||||| |||||||||  ||||||||||    
T  5772919 atttgcccgttgagctaagacttctagac 5772947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 56 - 183
Target Start/End: Original strand, 42081619 - 42081743
Alignment:
Q  56 gtcttagatgaagtcgtaatccacataaattaaactcacacacaactgtgaggtcccgggttcgaacccatatcatgacgtccgaccttgcaattttgac 155  Q
    ||||||||| |||| ||||| |||  ||| ||||||||||||  |||||||||||| || |||||||||  ||||  |||| ||| ||||||||||||||    
T  42081619 gtcttagataaagtggtaattcactgaaaataaactcacaca--actgtgaggtccagg-ttcgaacccggatcacaacgttcgatcttgcaattttgac 42081715  T
Q  156 atttgccagttgagctagaacttctaga 183  Q
    ||||||||| |||||||| |||||||||    
T  42081716 atttgccagctgagctaggacttctaga 42081743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 271 - 350
Target Start/End: Complemental strand, 4501786 - 4501707
Alignment:
Q  271 ttaggtcagcatatgtcaccagttgagtaccgtactatccttcgatatcatcttatgattccactttttcctattgatga 350  Q
    ||||||||||||||||||||| | ||||| |||||||||||| |||||| ||||||||||||| | ||| ||||||||||    
T  4501786 ttaggtcagcatatgtcaccaatggagtatcgtactatccttagatatcgtcttatgattccattattttctattgatga 4501707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 56 - 151
Target Start/End: Original strand, 39513983 - 39514078
Alignment:
Q  56 gtcttagatgaagtcgtaatccacataaattaaactcacacacaactgtgaggtcccgggttcgaacccatatcatgacgtccgaccttgcaattt 151  Q
    |||| ||||||||| |||||||||  |||||||||||||||| |||||| ||||||||||||||||| |   ||| |||||||| |||||||||||    
T  39513983 gtctcagatgaagtggtaatccaccgaaattaaactcacacataactgtaaggtcccgggttcgaactcgggtcacgacgtccggccttgcaattt 39514078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 59 - 185
Target Start/End: Original strand, 15634882 - 15635008
Alignment:
Q  59 ttagatgaagtcgtaatccacataaattaaactcacacacaactgtgaggtcccgggttcgaacccatatcatgacgtccgaccttgcaattttgacatt 158  Q
    ||||||||||| |||||| ||  ||| ||||||||||||||||||||| || |||| |||||| ||   ||| |||||||||| || |||||| | ||||    
T  15634882 ttagatgaagtggtaatctactgaaaataaactcacacacaactgtgaagttccggtttcgaatccgggtcacgacgtccgactttacaatttcggcatt 15634981  T
Q  159 tgccagttgagctagaacttctagact 185  Q
    ||| ||||||||||  |||||||||||    
T  15634982 tgctagttgagctatgacttctagact 15635008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 56 - 170
Target Start/End: Original strand, 31288224 - 31288338
Alignment:
Q  56 gtcttagatgaagtcgtaatccacataaattaaactcacacacaactgtgaggtcccgggttcgaacccatatcatgacgtccgaccttgcaattttgac 155  Q
    |||||||||||||| |||| ||||  |||||||||| ||||||||||||||| | || | |||||||||| |||||||| ||  ||||| | ||||||||    
T  31288224 gtcttagatgaagtggtaaaccactgaaattaaacttacacacaactgtgagattccagattcgaacccagatcatgacatcataccttacgattttgac 31288323  T
Q  156 atttgccagttgagc 170  Q
    ||||  |||||||||    
T  31288324 atttatcagttgagc 31288338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 66 - 184
Target Start/End: Complemental strand, 34763560 - 34763454
Alignment:
Q  66 aagtcgtaatccacataaattaaactcacacacaactgtgaggtcccgggttcgaacccatatcatgacgtccgaccttgcaattttgacatttgccagt 165  Q
    |||| |||||||||  ||||||||||||||||||||||||||||||||||            ||| |||||||| ||||||||||| ||||||| |||||    
T  34763560 aagtggtaatccactgaaattaaactcacacacaactgtgaggtcccggg------------tcacgacgtccgcccttgcaatttcgacattttccagt 34763473  T
Q  166 tgagctagaacttctagac 184  Q
    |||||||| ||||||||||    
T  34763472 tgagctaggacttctagac 34763454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 56 - 184
Target Start/End: Original strand, 32606330 - 32606458
Alignment:
Q  56 gtcttagatgaagtcgtaatccacataaattaaactcacacacaactgtgaggtcccgggttcgaacccatatcatgacgtccgaccttgcaattttgac 155  Q
    |||||||||||| | ||||| |||  |||||||| ||||| | |||||| ||||| ||||||||||||    ||| |||||||| ||||||||||| |      
T  32606330 gtcttagatgaattggtaattcactgaaattaaattcacataaaactgtaaggtctcgggttcgaacctgggtcacgacgtccggccttgcaatttcggt 32606429  T
Q  156 atttgccagttgagctagaacttctagac 184  Q
    ||||| |||||||| ||||||||||||||    
T  32606430 atttgtcagttgagttagaacttctagac 32606458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 61 - 184
Target Start/End: Original strand, 18506281 - 18506403
Alignment:
Q  61 agatgaagtcgtaatccacataaattaaactcacacacaactgtgaggtcccgggttcgaacccatatcatgacgtccgaccttgcaattttgacatttg 160  Q
    ||||||||  |||| ||||  |||||||||||||||||| |||||| ||| ||||||||||| |  |||||||  ||||||||||||||||| ||||||     
T  18506281 agatgaagcggtaaaccactgaaattaaactcacacaca-ctgtgaagtctcgggttcgaactcggatcatgatatccgaccttgcaattttaacatttt 18506379  T
Q  161 ccagttgagctagaacttctagac 184  Q
      ||||| ||||| ||||||||||    
T  18506380 ttagttgtgctaggacttctagac 18506403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 86 - 185
Target Start/End: Complemental strand, 43203404 - 43203305
Alignment:
Q  86 taaactcacacacaactgtgaggtcccgggttcgaacccatatcatgacgtccgaccttgcaattttgacatttgccagttgagctagaacttctagact 185  Q
    ||||||||||||||||||| |||||||||||||||||||   ||| | |||||  |||| |||||| | |||||||||||| | |||| |||||||||||    
T  43203404 taaactcacacacaactgtaaggtcccgggttcgaacccgggtcacggcgtcccgccttacaatttcggcatttgccagttcatctaggacttctagact 43203305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 233 - 346
Target Start/End: Complemental strand, 24528156 - 24528043
Alignment:
Q  233 atgctcaagattttcttccagctattccaattgatggattaggtcagcatatgtcaccagttgagtaccgtactatccttcgatatcatcttatgattcc 332  Q
    ||||||| |||||||||| ||||||    |||||||| ||||| || |||||||||||||| ||||| | ||||||| || ||||||  |||||||||||    
T  24528156 atgctcaggattttcttctagctatcatgattgatgggttaggacaacatatgtcaccagtggagtatcatactatcattagatatcgccttatgattcc 24528057  T
Q  333 actttttcctattg 346  Q
    ||| |||| |||||    
T  24528056 actatttcttattg 24528043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 71 - 184
Target Start/End: Original strand, 25049973 - 25050086
Alignment:
Q  71 gtaatccacataaattaaactcacacacaactgtgaggtcccgggttcgaacccatatcatgacgtccgaccttgcaattttgacatttgccagttgagc 170  Q
    ||||||||| ||||||||||||||| ||||||||||| ||  | |||| || |||  ||| |||||| |||||| |||||| | ||||| | |||||||     
T  25049973 gtaatccacttaaattaaactcacatacaactgtgagatcatgagttcaaatccaggtcacgacgtctgacctttcaatttcggcattttctagttgagt 25050072  T
Q  171 tagaacttctagac 184  Q
    ||||||||||||||    
T  25050073 tagaacttctagac 25050086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 56 - 185
Target Start/End: Complemental strand, 25872891 - 25872762
Alignment:
Q  56 gtcttagatgaagtcgtaatccacataaattaaactcacacacaactgtgaggtcccgggttcgaacccatatcatgacgtccgaccttgcaattttgac 155  Q
    |||||||||||||| ||||  |||| ||| |||||||| |||||| ||| |||||   ||||||||||   |||| |||||||||||||| ||| | | |    
T  25872891 gtcttagatgaagtggtaaatcacagaaaataaactcatacacaattgtaaggtcataggttcgaacctggatcacgacgtccgaccttgtaatatcggc 25872792  T
Q  156 atttgccagttgagctagaacttctagact 185  Q
    |||||||| ||||| ||| |||||||||||    
T  25872791 atttgccaattgagttaggacttctagact 25872762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 56 - 184
Target Start/End: Original strand, 27915580 - 27915709
Alignment:
Q  56 gtcttagatgaagtcgtaatccacataaattaaactcacacacaactgtgaggtcccgggttcgaacccata-tcatgacgtccgaccttgcaattttga 154  Q
    |||||||||||||| ||||| ||   |||||||||||| ||||||||||||| ||   ||||||||| ||   ||| ||||||||||||||||||||       
T  27915580 gtcttagatgaagtggtaattcattgaaattaaactcatacacaactgtgagatcttaggttcgaactcaaggtcacgacgtccgaccttgcaatttcag 27915679  T
Q  155 catttgccagttgagctagaacttctagac 184  Q
    ||||| ||||||||| ||| ||||||||||    
T  27915680 catttaccagttgagttaggacttctagac 27915709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 56 - 181
Target Start/End: Complemental strand, 35309982 - 35309854
Alignment:
Q  56 gtcttagatgaagtcgtaatccacataaattaaactcacacacaactgtgaggtcccgggttcgaacccatatcatgacgtccgaccttgcaattttgac 155  Q
    ||||||||||||||  ||| ||||  ||||||||||| ||||||| |||||| |||||| |||||| |||  ||| |||||||| |||| ||||||  ||    
T  35309982 gtcttagatgaagtgataaaccactgaaattaaactcgcacacaattgtgagatcccggattcgaaaccaggtcaagacgtccggccttacaatttcaac 35309883  T
Q  156 atttgccagt---tgagctagaacttcta 181  Q
     |||| ||||   ||||||||||||||||    
T  35309882 ttttgtcagttgatgagctagaacttcta 35309854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 56 - 167
Target Start/End: Original strand, 4001844 - 4001953
Alignment:
Q  56 gtcttagatgaagtcgtaatccacataaattaaactcacacacaactgtgaggtcccgggttcgaacccatatcatgacgtccgaccttgcaattttgac 155  Q
    |||||||||||||| |||| |||   ||||||||||||||||   ||| ||||||||| ||||||||||   ||| ||| |||| ||||||||||| |||    
T  4001844 gtcttagatgaagtggtaaaccattgaaattaaactcacacag--ctgagaggtcccgagttcgaacccgggtcacgacatccggccttgcaatttcgac 4001941  T
Q  156 atttgccagttg 167  Q
    |||| |||||||    
T  4001942 attttccagttg 4001953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 294 - 350
Target Start/End: Complemental strand, 10905608 - 10905552
Alignment:
Q  294 tgagtaccgtactatccttcgatatcatcttatgattccactttttcctattgatga 350  Q
    |||||| |||||||||||| |||||||||||||||||||||| ||||  ||||||||    
T  10905608 tgagtatcgtactatccttagatatcatcttatgattccactatttctcattgatga 10905552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 56 - 106
Target Start/End: Original strand, 19630668 - 19630718
Alignment:
Q  56 gtcttagatgaagtcgtaatccacataaattaaactcacacacaactgtga 106  Q
    |||||||||||||| |||||||||  ||| |||||||||||||||||||||    
T  19630668 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtga 19630718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 56 - 185
Target Start/End: Complemental strand, 40657657 - 40657525
Alignment:
Q  56 gtcttagatgaagtcgtaatccacataaattaaactcacacacaactgtgaggtcccgggttcgaacccatatcatgacgtccgaccttgcaattttgac 155  Q
    ||||||||||||||  ||||||||  ||||||||||| |||| |||| ||||||| | | ||||||| |   | ||||||| |||| ||| |||||||||    
T  40657657 gtcttagatgaagtgataatccactgaaattaaactcgcacataactatgaggtctcagattcgaactcgagttatgacgttcgacattgtaattttgac 40657558  T
Q  156 atttgccagtt---gagctagaacttctagact 185  Q
    |||| | ||||    ||||||||||||||||||    
T  40657557 atttactagttaagaagctagaacttctagact 40657525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 56 - 185
Target Start/End: Original strand, 7298125 - 7298254
Alignment:
Q  56 gtcttagatgaagtcgtaatccacataaattaaactcacacacaactgtgaggtcccgggttcgaacccatatcatgacgtccgaccttgcaattttgac 155  Q
    ||||| |||||||| |||||| ||  ||||||||||| || | || ||||||||| | |||||||| |    ||| ||| |||||||||  ||||||| |    
T  7298125 gtcttggatgaagtagtaatctactaaaattaaactctcatataattgtgaggtctcaggttcgaatctgggtcacgacatccgaccttataattttggc 7298224  T
Q  156 atttgccagttgagctagaacttctagact 185  Q
    ||||  ||||||||||| ||||||||||||    
T  7298225 atttatcagttgagctataacttctagact 7298254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 59 - 183
Target Start/End: Original strand, 23036208 - 23036330
Alignment:
Q  59 ttagatgaagtcgtaatccacataaattaaactcacacacaactgtgaggtcccgggttcgaacccatatcatgacgtccgaccttgcaattttgacatt 158  Q
    ||||||||||| ||||||||   |||||||||||||| |  |||||||||| | | ||||||| |    |||| ||||||||||||  ||||||||||||    
T  23036208 ttagatgaagtggtaatccattgaaattaaactcacata--actgtgaggttctgagttcgaatctgagtcataacgtccgaccttataattttgacatt 23036305  T
Q  159 tgccagttgagctagaacttctaga 183  Q
    || ||||||| |||| |||| ||||    
T  23036306 tgtcagttgaactaggacttttaga 23036330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 56 - 181
Target Start/End: Original strand, 35577876 - 35578001
Alignment:
Q  56 gtcttagatgaagtcgtaatccacataaattaaactcacacacaactgtgaggtcccgggttcgaacccatatcatgacgtccgaccttgcaattttgac 155  Q
    |||||||||||| | ||||||||   |||||||||| |||||||| ||||| ||| ||||||||||| |   ||| ||| ||||| |||  ||||||  |    
T  35577876 gtcttagatgaaattgtaatccattgaaattaaacttacacacaattgtgaagtctcgggttcgaactcgggtcacgacatccgatcttaaaattttagc 35577975  T
Q  156 atttgccagttgagctagaacttcta 181  Q
    |||||| ||||||| || ||||||||    
T  35577976 atttgctagttgagttaaaacttcta 35578001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 132 - 184
Target Start/End: Original strand, 25504007 - 25504059
Alignment:
Q  132 gacgtccgaccttgcaattttgacatttgccagttgagctagaacttctagac 184  Q
    |||||||| | |||||||||||||||||| ||||||| ||| |||||||||||    
T  25504007 gacgtccggctttgcaattttgacatttgtcagttgaactaaaacttctagac 25504059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 71 - 169
Target Start/End: Complemental strand, 13887282 - 13887186
Alignment:
Q  71 gtaatccacataaattaaactcacacacaactgtgaggtcccgggttcgaacccatatcatgacgtccgaccttgcaattttgacatttgccagttgag 169  Q
    |||||||||  |||||||||||| |||  |||||||||| |||||||||||||    ||| ||||||||  ||||||| || | |||||||||||||||    
T  13887282 gtaatccactgaaattaaactcataca--actgtgaggttccgggttcgaacctgggtcacgacgtccggtcttgcaagttcggcatttgccagttgag 13887186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 82 - 184
Target Start/End: Original strand, 5462976 - 5463078
Alignment:
Q  82 aaattaaactcacacacaactgtgaggtcccgggttcgaacccatatcatgacgtccgaccttgcaattttgacatttgccagttgagctagaacttcta 181  Q
    |||||||||||||||||||||||||| || | |||||||| ||  ||||  || ||| || ||||||||||   ||||| |||||||| ||  |||||||    
T  5462976 aaattaaactcacacacaactgtgagatctcaggttcgaatccggatcacaacatccaacattgcaattttagtatttgtcagttgagttaagacttcta 5463075  T
Q  182 gac 184  Q
    |||    
T  5463076 gac 5463078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 135 - 184
Target Start/End: Original strand, 27737949 - 27737998
Alignment:
Q  135 gtccgaccttgcaattttgacatttgccagttgagctagaacttctagac 184  Q
    |||||||||||||||||||| ||||| |||||||| ||| |||| |||||    
T  27737949 gtccgaccttgcaattttgatatttgtcagttgagttaggacttatagac 27737998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 130 - 166
Target Start/End: Complemental strand, 3838662 - 3838626
Alignment:
Q  130 atgacgtccgaccttgcaattttgacatttgccagtt 166  Q
    ||||||| ||||||||||||||||||||||| |||||    
T  3838662 atgacgttcgaccttgcaattttgacatttgtcagtt 3838626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 274 - 346
Target Start/End: Complemental strand, 4175744 - 4175672
Alignment:
Q  274 ggtcagcatatgtcaccagttgagtaccgtactatccttcgatatcatcttatgattccactttttcctattg 346  Q
    ||||| ||||||||||  || |||||||||||||||||| ||||    |||||||||||||| || |||||||    
T  4175744 ggtcaacatatgtcacatgtggagtaccgtactatccttagatagtgccttatgattccactattccctattg 4175672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 85 - 181
Target Start/End: Complemental strand, 34038587 - 34038491
Alignment:
Q  85 ttaaactcacacacaactgtgaggtcccgggttcgaacccatatcatgacgtccgaccttgcaattttgacatttgccagttgagctagaacttcta 181  Q
    ||||||||||| |||||| |||| | |  |||||||| ||||||||| |||||| ||||| |||||| | ||||||  | ||||| ||| |||||||    
T  34038587 ttaaactcacatacaactttgagattctaggttcgaatccatatcataacgtccaaccttacaatttcggcatttgtgaattgagttaggacttcta 34038491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 90; Significance: 2e-43; HSPs: 49)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 56 - 189
Target Start/End: Original strand, 43247650 - 43247783
Alignment:
Q  56 gtcttagatgaagtcgtaatccacataaattaaactcacacacaactgtgaggtcccgggttcgaacccatatcatgacgtccgaccttgcaattttgac 155  Q
    |||||||||||||| |||||||||  ||| ||||||||||||||||||||||||||||||||||||||||  |||  ||||||| ||||||||||||| |    
T  43247650 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccaggtcacaacgtccggccttgcaattttggc 43247749  T
Q  156 atttgccagttgagctagaacttctagactgcta 189  Q
    |||||||||||||||||| |||||||||||||||    
T  43247750 atttgccagttgagctaggacttctagactgcta 43247783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 56 - 184
Target Start/End: Complemental strand, 54158394 - 54158266
Alignment:
Q  56 gtcttagatgaagtcgtaatccacataaattaaactcacacacaactgtgaggtcccgggttcgaacccatatcatgacgtccgaccttgcaattttgac 155  Q
    |||||||||||||| |||||||||  ||| |||||||||||||||||||||||||||||||||||||||  ||||||||||||| ||||||||||| | |    
T  54158394 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccggatcatgacgtccggccttgcaatttcggc 54158295  T
Q  156 atttgccagttgagctagaacttctagac 184  Q
    |||||||||||||||||| ||||||||||    
T  54158294 atttgccagttgagctaggacttctagac 54158266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 56 - 186
Target Start/End: Original strand, 42392805 - 42392935
Alignment:
Q  56 gtcttagatgaagtcgtaatccacataaattaaactcacacacaactgtgaggtcccgggttcgaacccatatcatgacgtccgaccttgcaattttgac 155  Q
    |||||||||||||| |||| ||||  ||||||||||||||||||| ||||||||||||||||||| |||  ||||||||||||||||||||||||| | |    
T  42392805 gtcttagatgaagtggtaaaccactgaaattaaactcacacacaattgtgaggtcccgggttcgagcccggatcatgacgtccgaccttgcaatttcggc 42392904  T
Q  156 atttgccagttgagctagaacttctagactg 186  Q
    |||||||||||||||||| ||||||||||||    
T  42392905 atttgccagttgagctaggacttctagactg 42392935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 56 - 184
Target Start/End: Original strand, 7824454 - 7824582
Alignment:
Q  56 gtcttagatgaagtcgtaatccacataaattaaactcacacacaactgtgaggtcccgggttcgaacccatatcatgacgtccgaccttgcaattttgac 155  Q
    |||||||||||||| |||||||||  ||| |||||||||||||||||||||||||||||||||||||||   |||||||||||| ||||||||||| | |    
T  7824454 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgacgtccggccttgcaatttcggc 7824553  T
Q  156 atttgccagttgagctagaacttctagac 184  Q
    |||||||||||||||||| ||||||||||    
T  7824554 atttgccagttgagctaggacttctagac 7824582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 56 - 184
Target Start/End: Original strand, 29689482 - 29689610
Alignment:
Q  56 gtcttagatgaagtcgtaatccacataaattaaactcacacacaactgtgaggtcccgggttcgaacccatatcatgacgtccgaccttgcaattttgac 155  Q
    |||||||||||||| |||||||||  ||| |||||||||||||||||||||||||||||||||||||||   |||||||||||| ||||||||||| | |    
T  29689482 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgacgtccggccttgcaatttcggc 29689581  T
Q  156 atttgccagttgagctagaacttctagac 184  Q
    |||||||||||||||||| ||||||||||    
T  29689582 atttgccagttgagctaggacttctagac 29689610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 56 - 184
Target Start/End: Original strand, 51665925 - 51666053
Alignment:
Q  56 gtcttagatgaagtcgtaatccacataaattaaactcacacacaactgtgaggtcccgggttcgaacccatatcatgacgtccgaccttgcaattttgac 155  Q
    |||||||||||||| |||||||||  ||| ||||||||||||||||||| ||||||||||||||||||||  |||||||||||| ||||||||||| | |    
T  51665925 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtaaggtcccgggttcgaacccaggtcatgacgtccggccttgcaatttcggc 51666024  T
Q  156 atttgccagttgagctagaacttctagac 184  Q
    |||||||||||||||||| ||||||||||    
T  51666025 atttgccagttgagctaggacttctagac 51666053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 56 - 184
Target Start/End: Original strand, 54151681 - 54151809
Alignment:
Q  56 gtcttagatgaagtcgtaatccacataaattaaactcacacacaactgtgaggtcccgggttcgaacccatatcatgacgtccgaccttgcaattttgac 155  Q
    |||||||||||||| |||||||||  ||| |||||||| ||||||||||||||||||||||||||||||   |||||||||||| ||||||||||| | |    
T  54151681 gtcttagatgaagtggtaatccactgaaaataaactcatacacaactgtgaggtcccgggttcgaacccgggtcatgacgtccggccttgcaatttcggc 54151780  T
Q  156 atttgccagttgagctagaacttctagac 184  Q
    |||||||||||||||||| ||||||||||    
T  54151781 atttgccagttgagctaggacttctagac 54151809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 223 - 350
Target Start/End: Complemental strand, 53786284 - 53786157
Alignment:
Q  223 caagcaccacatgctcaagattttcttccagctattccaattgatggattaggtcagcatatgtcaccagttgagtaccgtactatccttcgatatcatc 322  Q
    |||||||||||||||||||||||||||| ||||||||  |||||||| ||||||||||||||||||||||| ||||| |||| ||||||| ||||||  |    
T  53786284 caagcaccacatgctcaagattttcttctagctattctgattgatgggttaggtcagcatatgtcaccagtggagtatcgtattatccttagatatcgcc 53786185  T
Q  323 ttatgattccactttttcctattgatga 350  Q
    ||||||||| ||| ||||||||||||||    
T  53786184 ttatgattcaactatttcctattgatga 53786157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 56 - 186
Target Start/End: Complemental strand, 4601553 - 4601423
Alignment:
Q  56 gtcttagatgaagtcgtaatccacataaattaaactcacacacaactgtgaggtcccgggttcgaacccatatcatgacgtccgaccttgcaattttgac 155  Q
    |||||||||||| | |||||||||  ||| |||||||||||||||||||||||| ||||||||||||||   |||||||||||| ||||||||||| | |    
T  4601553 gtcttagatgaactggtaatccactgaaaataaactcacacacaactgtgaggttccgggttcgaacccgggtcatgacgtccggccttgcaatttcggc 4601454  T
Q  156 atttgccagttgagctagaacttctagactg 186  Q
    |||||||||||||||||| ||||||||||||    
T  4601453 atttgccagttgagctaggacttctagactg 4601423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 62 - 184
Target Start/End: Original strand, 55018040 - 55018162
Alignment:
Q  62 gatgaagtcgtaatccacataaattaaactcacacacaactgtgaggtcccgggttcgaacccatatcatgacgtccgaccttgcaattttgacatttgc 161  Q
    |||||||| |||||||||  ||| |||||||||||||||||||||||||||||||||||||||   ||| |||||||| |||||||||||||||||||||    
T  55018040 gatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccgggtcacgacgtccggccttgcaattttgacatttgc 55018139  T
Q  162 cagttgagctagaacttctagac 184  Q
    |||||||| ||| ||||||||||    
T  55018140 cagttgagttaggacttctagac 55018162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 57 - 185
Target Start/End: Original strand, 35461480 - 35461608
Alignment:
Q  57 tcttagatgaagtcgtaatccacataaattaaactcacacacaactgtgaggtcccgggttcgaacccatatcatgacgtccgaccttgcaattttgaca 156  Q
    ||||||||||| |  ||||| ||| ||| |||||||||||||||||||||||| ||||||||||||||  ||||  ||||||||||||||||||| | ||    
T  35461480 tcttagatgaaatgataatctacagaaaataaactcacacacaactgtgaggttccgggttcgaacccggatcacaacgtccgaccttgcaatttcggca 35461579  T
Q  157 tttgccagttgagctagaacttctagact 185  Q
    |||||||||||||||||||||||||||||    
T  35461580 tttgccagttgagctagaacttctagact 35461608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 56 - 172
Target Start/End: Original strand, 36228994 - 36229110
Alignment:
Q  56 gtcttagatgaagtcgtaatccacataaattaaactcacacacaactgtgaggtcccgggttcgaacccatatcatgacgtccgaccttgcaattttgac 155  Q
    |||||||||||||| ||||||||   ||| |||||||||||||||||||||||||||||||||||||||  ||||||||||||| ||||||||||| | |    
T  36228994 gtcttagatgaagtggtaatccattgaaaataaactcacacacaactgtgaggtcccgggttcgaacccggatcatgacgtccggccttgcaatttcggc 36229093  T
Q  156 atttgccagttgagcta 172  Q
    |||||||||||||||||    
T  36229094 atttgccagttgagcta 36229110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 56 - 187
Target Start/End: Complemental strand, 52500966 - 52500835
Alignment:
Q  56 gtcttagatgaagtcgtaatccacataaattaaactcacacacaactgtgaggtcccgggttcgaacccatatcatgacgtccgaccttgcaattttgac 155  Q
    |||||||||||||| |||||| ||  ||| ||||||||||||||||||||||||  | |||||||||||  ||||||||||||| |||| |||||| |||    
T  52500966 gtcttagatgaagtggtaatctactgaaaataaactcacacacaactgtgaggtttcaggttcgaacccggatcatgacgtccggccttacaatttcgac 52500867  T
Q  156 atttgccagttgagctagaacttctagactgc 187  Q
    |||||||||||||||||| |||||||||||||    
T  52500866 atttgccagttgagctaggacttctagactgc 52500835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 59 - 168
Target Start/End: Original strand, 9349679 - 9349788
Alignment:
Q  59 ttagatgaagtcgtaatccacataaattaaactcacacacaactgtgaggtcccgggttcgaacccatatcatgacgtccgaccttgcaattttgacatt 158  Q
    ||||||||||| |||||||||  ||| |||||||||||||||||||||||||||||||||||||||  |||| |||||||||||||||||||| | ||||    
T  9349679 ttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccggatcacgacgtccgaccttgcaatttcggcatt 9349778  T
Q  159 tgccagttga 168  Q
    ||||||||||    
T  9349779 tgccagttga 9349788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 56 - 184
Target Start/End: Complemental strand, 28844633 - 28844504
Alignment:
Q  56 gtcttagatgaagtcgtaatccacataaat-taaactcacacacaactgtgaggtcccgggttcgaacccatatcatgacgtccgaccttgcaattttga 154  Q
    |||||||||||||| |||||||||  |||  |||||||||||||||||||||||| || |||||||||||   |||  ||||||| ||||||||||| |     
T  28844633 gtcttagatgaagtggtaatccactgaaaaataaactcacacacaactgtgaggttccaggttcgaacccgggtcacaacgtccggccttgcaatttcgg 28844534  T
Q  155 catttgccagttgagctagaacttctagac 184  Q
    |||||| |||||||||||||||||||||||    
T  28844533 catttgtcagttgagctagaacttctagac 28844504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 56 - 168
Target Start/End: Original strand, 475281 - 475392
Alignment:
Q  56 gtcttagatgaagtcgtaatccacataaattaaactcacacacaactgtgaggtcccgggttcgaacccatatcatgacgtccgaccttgcaattttgac 155  Q
    |||||||||||||| ||||| ||| | ||||||||||||||||||||||||||| ||| ||||||||||  |||||||||||||||||||||||||   |    
T  475281 gtcttagatgaagtggtaattcac-tgaattaaactcacacacaactgtgaggttccgagttcgaacccggatcatgacgtccgaccttgcaatttcagc 475379  T
Q  156 atttgccagttga 168  Q
    |||| ||||||||    
T  475380 atttcccagttga 475392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 56 - 172
Target Start/End: Original strand, 3112995 - 3113111
Alignment:
Q  56 gtcttagatgaagtcgtaatccacataaattaaactcacacacaactgtgaggtcccgggttcgaacccatatcatgacgtccgaccttgcaattttgac 155  Q
    |||||||||||||| |||||||||  ||| |||||||||||||||||||||| |||||||||||||| |   | | |||||||| ||||||||||| | |    
T  3112995 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgagatcccgggttcgaactcgggttacgacgtccggccttgcaatttcggc 3113094  T
Q  156 atttgccagttgagcta 172  Q
    |||||||||||||||||    
T  3113095 atttgccagttgagcta 3113111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 56 - 184
Target Start/End: Complemental strand, 41377707 - 41377584
Alignment:
Q  56 gtcttagatgaagtcgtaatccacataaattaaactcacacacaactgtgaggtcccgggttcgaacccatatcatgacgtccgaccttgcaattttgac 155  Q
    |||||||||||||| ||||||| |  ||| ||||||||||||     |||||||||||||||||||||   ||||||||||||| |||| |||||||| |    
T  41377707 gtcttagatgaagtggtaatccgctgaaaataaactcacaca-----gtgaggtcccgggttcgaacctggatcatgacgtccggccttacaattttggc 41377613  T
Q  156 atttgccagttgagctagaacttctagac 184  Q
    |||||||||||||||||| ||||||||||    
T  41377612 atttgccagttgagctaggacttctagac 41377584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 56 - 184
Target Start/End: Complemental strand, 33334736 - 33334608
Alignment:
Q  56 gtcttagatgaagtcgtaatccacataaattaaactcacacacaactgtgaggtcccgggttcgaacccatatcatgacgtccgaccttgcaattttgac 155  Q
    |||||| |||||||  ||||| ||  ||||||||||||||||||||||||||||||||| ||||||| ||  |||  ||||||| | ||||||||| | |    
T  33334736 gtcttatatgaagtgataatctactgaaattaaactcacacacaactgtgaggtcccggattcgaactcaggtcacaacgtccggctttgcaatttcggc 33334637  T
Q  156 atttgccagttgagctagaacttctagac 184  Q
    |||||| ||||||||||| ||||||||||    
T  33334636 atttgcaagttgagctaggacttctagac 33334608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 57 - 157
Target Start/End: Original strand, 38257304 - 38257404
Alignment:
Q  57 tcttagatgaagtcgtaatccacataaattaaactcacacacaactgtgaggtcccgggttcgaacccatatcatgacgtccgaccttgcaattttgaca 156  Q
    ||||||||||||| ||||||| |  ||||||||||||||||||| |||||||| | |||||||||||||  ||| |||||||||||||||||||| ||||    
T  38257304 tcttagatgaagtggtaatccgctgaaattaaactcacacacaattgtgaggttctgggttcgaacccaggtcacgacgtccgaccttgcaatttcgaca 38257403  T
Q  157 t 157  Q
    |    
T  38257404 t 38257404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 57 - 184
Target Start/End: Original strand, 40756728 - 40756856
Alignment:
Q  57 tcttagatgaagtcgtaatccacataaattaaactcacacacaactgtgaggtcccgggttcgaacccatatcatga-cgtccgaccttgcaattttgac 155  Q
    ||||||||||||| |||| | ||  ||||||||||||||| ||||||||||||| |||||||||| ||  ||||||| |||| ||||||||||||||| |    
T  40756728 tcttagatgaagtggtaaactactgaaattaaactcacacgcaactgtgaggtctcgggttcgaatccggatcatgatcgtctgaccttgcaattttggc 40756827  T
Q  156 atttgccagttgagctagaacttctagac 184  Q
    ||||  |||||||| ||| ||||||||||    
T  40756828 atttttcagttgagttaggacttctagac 40756856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 56 - 184
Target Start/End: Complemental strand, 43775351 - 43775223
Alignment:
Q  56 gtcttagatgaagtcgtaatccacataaattaaactcacacacaactgtgaggtcccgggttcgaacccatatcatgacgtccgaccttgcaattttgac 155  Q
    |||||||||||||| |||||||||  |||||||||||| | ||||||||||| | |||| ||||||| ||  |||  |||||||||||| |||||| | |    
T  43775351 gtcttagatgaagtggtaatccactgaaattaaactcaaatacaactgtgagattccggattcgaacgcaagtcacaacgtccgaccttacaatttcggc 43775252  T
Q  156 atttgccagttgagctagaacttctagac 184  Q
    |||||||||||||| |||||||| |||||    
T  43775251 atttgccagttgagttagaacttttagac 43775223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 59 - 184
Target Start/End: Complemental strand, 7958694 - 7958569
Alignment:
Q  59 ttagatgaagtcgtaatccacataaattaaactcacacacaactgtgaggtcccgggttcgaacccatatcatgacgtccgaccttgcaattttgacatt 158  Q
    ||||||||||| |||||||||  ||| |||||| ||||| ||||||||||||||||||||||||||  |||| | | |||  | || |||||||||||||    
T  7958694 ttagatgaagtggtaatccactaaaaataaacttacacataactgtgaggtcccgggttcgaacccggatcacggcatcctgctttacaattttgacatt 7958595  T
Q  159 tgccagttgagctagaacttctagac 184  Q
    || |||||||| ||| ||||||||||    
T  7958594 tgtcagttgaggtaggacttctagac 7958569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 230 - 350
Target Start/End: Complemental strand, 29862367 - 29862246
Alignment:
Q  230 cacatgctcaagattttcttccagctattccaattgatggattag-gtcagcatatgtcaccagttgagtaccgtactatccttcgatatcatcttatga 328  Q
    |||||||||| |||||||||| ||||||  | |||||||| |||  |||||||||||||||||||  |||| |||||||||||| ||||||  |||||||    
T  29862367 cacatgctcatgattttcttctagctatctcgattgatgggttaaagtcagcatatgtcaccagtgaagtagcgtactatccttagatatcgccttatga 29862268  T
Q  329 ttccactttttcctattgatga 350  Q
    ||||| | ||||||||||||||    
T  29862267 ttccattatttcctattgatga 29862246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 56 - 185
Target Start/End: Complemental strand, 50729652 - 50729523
Alignment:
Q  56 gtcttagatgaagtcgtaatccacataaattaaactcacacacaactgtgaggtcccgggttcgaacccatatcatgacgtccgaccttgcaattttgac 155  Q
    |||||||||||||| |||||| |   |||||||||||||| | ||||| |||||| |  ||||||| ||| |||| |||||| |||||| |||||| | |    
T  50729652 gtcttagatgaagtggtaatctattgaaattaaactcacataaaactgcgaggtctcatgttcgaatccagatcacgacgtctgaccttacaatttcggc 50729553  T
Q  156 atttgccagttgagctagaacttctagact 185  Q
    ||||| ||||||||||||||||||||||||    
T  50729552 atttgtcagttgagctagaacttctagact 50729523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 56 - 185
Target Start/End: Original strand, 50783197 - 50783326
Alignment:
Q  56 gtcttagatgaagtcgtaatccacataaattaaactcacacacaactgtgaggtcccgggttcgaacccatatcatgacgtccgaccttgcaattttgac 155  Q
    |||||||||||||| |||||| |   |||||||||||||| | ||||| |||||| |  ||||||| ||| |||| |||||| |||||| |||||| | |    
T  50783197 gtcttagatgaagtggtaatctattgaaattaaactcacataaaactgcgaggtctcatgttcgaatccagatcacgacgtctgaccttacaatttcggc 50783296  T
Q  156 atttgccagttgagctagaacttctagact 185  Q
    ||||| ||||||||||||||||||||||||    
T  50783297 atttgtcagttgagctagaacttctagact 50783326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 65 - 172
Target Start/End: Original strand, 448884 - 448991
Alignment:
Q  65 gaagtcgtaatccacataaattaaactcacacacaactgtgaggtcccgggttcgaacccatatcatgacgtccgaccttgcaattttgacatttgccag 164  Q
    ||||| |||||||||  |||||||||||||| |||||||||||||||  ||||||||  |  |||| |||||||| |||| ||||||||||||||| |||    
T  448884 gaagtggtaatccactaaaattaaactcacaaacaactgtgaggtcctaggttcgaattcggatcacgacgtccggccttacaattttgacatttgtcag 448983  T
Q  165 ttgagcta 172  Q
    ||||||||    
T  448984 ttgagcta 448991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 56 - 183
Target Start/End: Complemental strand, 51054829 - 51054702
Alignment:
Q  56 gtcttagatgaagtcgtaatccacataaattaaactcacacacaactgtgaggtcccgggttcgaacccatatcatgacgtccgaccttgcaattttgac 155  Q
    |||||||||||||| ||||||||| ||||||||||| ||| |||| | ||||||   | ||||||||||  ||||| |||| |||||||| ||||| |||    
T  51054829 gtcttagatgaagtggtaatccacttaaattaaacttacaaacaattatgaggttttgagttcgaacccgaatcataacgttcgaccttgtaatttcgac 51054730  T
Q  156 atttgccagttgagctagaacttctaga 183  Q
    ||||| |||||||| ||| |||||||||    
T  51054729 atttgtcagttgagttaggacttctaga 51054702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 232 - 348
Target Start/End: Original strand, 52411442 - 52411558
Alignment:
Q  232 catgctcaagattttcttccagctattccaattgatggattaggtcagcatatgtcaccagttgagtaccgtactatccttcgatatcatcttatgattc 331  Q
    |||||||| |||||||||| |||||| || |||||||  ||| ||||||||||||||| ||| ||||| ||| |||||||| ||||||  ||| ||||||    
T  52411442 catgctcatgattttcttctagctatcccgattgatgagttaagtcagcatatgtcacgagtggagtatcgtgctatccttagatatcgccttgtgattc 52411541  T
Q  332 cactttttcctattgat 348  Q
    || | ||||||||||||    
T  52411542 cattgtttcctattgat 52411558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 56 - 180
Target Start/End: Original strand, 55320400 - 55320523
Alignment:
Q  56 gtcttagatgaagtcgtaatccacataaattaaactcacacacaactgtgaggtcccgggttcgaacccatatcatgacgtccgaccttgcaattttgac 155  Q
    |||||||||||||| |||||||||  ||| ||||||||||||||||| |||||| || ||||| ||||   || |||||||||||| || |||||||| |    
T  55320400 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactatgaggt-ccaggttcaaacctgaattatgacgtccgactttacaattttggc 55320498  T
Q  156 atttgccagttgagctagaacttct 180  Q
    ||||| || ||||||||||| ||||    
T  55320499 atttgtcaattgagctagaatttct 55320523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 58 - 184
Target Start/End: Complemental strand, 1778977 - 1778851
Alignment:
Q  58 cttagatgaagtcgtaatccacataaattaaactcacacacaactgtgaggtcccgggttcgaacccatatcatgacgtccgaccttgcaattttgacat 157  Q
    |||||||||||| ||||||||   ||| |||| ||| |||||| |||||||| ||||||||||||||   |||  | ||||| ||||||||||| | |||    
T  1778977 cttagatgaagtggtaatccattgaaaataaattcaaacacaattgtgaggttccgggttcgaacccgggtcacaatgtccggccttgcaatttcggcat 1778878  T
Q  158 ttgccagttgagctagaacttctagac 184  Q
    ||| |||||||||||| ||||||||||    
T  1778877 ttgtcagttgagctaggacttctagac 1778851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 237 - 319
Target Start/End: Complemental strand, 35236690 - 35236608
Alignment:
Q  237 tcaagattttcttccagctattccaattgatggattaggtcagcatatgtcaccagttgagtaccgtactatccttcgatatc 319  Q
    |||||||||||||| |||| | |   ||||||||||||||||||||||||||||||| ||||||| |||||||||| ||||||    
T  35236690 tcaagattttcttcaagctgtcctggttgatggattaggtcagcatatgtcaccagtggagtaccatactatccttagatatc 35236608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 56 - 184
Target Start/End: Complemental strand, 29750748 - 29750621
Alignment:
Q  56 gtcttagatgaagtcgtaatccacataaattaaactcacacacaactgtgaggtcccgggttcgaacccatatcatgacgtccgaccttgcaattttgac 155  Q
    |||||||||||||| ||||||||| | |||| ||||||| ||||| ||||||||| |  ||||||| ||   ||| |||||||  ||||||||||| | |    
T  29750748 gtcttagatgaagtggtaatccac-tgaatttaactcacgcacaaatgtgaggtctctagttcgaatccgggtcacgacgtccagccttgcaatttcggc 29750650  T
Q  156 atttgccagttgagctagaacttctagac 184  Q
    |||||||||||||| ||| ||||||||||    
T  29750649 atttgccagttgagttagtacttctagac 29750621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 56 - 184
Target Start/End: Original strand, 47635005 - 47635133
Alignment:
Q  56 gtcttagatgaagtcgtaatccacataaattaaactcacacacaactgtgaggtcccgggttcgaacccatatcatgacgtccgaccttgcaattttgac 155  Q
    |||||||||||||| |||||| ||  |||||||||| ||||| ||||| ||||||| || ||||||||||  |||  | ||||||||||||||||   |     
T  47635005 gtcttagatgaagtggtaatcaactgaaattaaacttacacataactgcgaggtcctggattcgaacccaggtcacaatgtccgaccttgcaattccaaa 47635104  T
Q  156 atttgccagttgagctagaacttctagac 184  Q
    |||| ||||||||  ||| ||||||||||    
T  47635105 atttaccagttgaattaggacttctagac 47635133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 231 - 335
Target Start/End: Complemental strand, 49018520 - 49018416
Alignment:
Q  231 acatgctcaagattttcttccagctattccaattgatggattaggtcagcatatgtcaccagttgagtaccgtactatccttcgatatcatcttatgatt 330  Q
    ||||||||| |||||||||| |||||| |  |||||||| ||||||||||  ||||||| ||| ||||| || |||||| || ||||||  |||||||||    
T  49018520 acatgctcatgattttcttctagctatcctgattgatgggttaggtcagcgcatgtcacaagtggagtatcgaactatcattagatatcgccttatgatt 49018421  T
Q  331 ccact 335  Q
    |||||    
T  49018420 ccact 49018416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 56 - 183
Target Start/End: Original strand, 2590810 - 2590928
Alignment:
Q  56 gtcttagatgaagtcgtaatccacataaattaaactcacacacaactgtgaggtcccgggttcgaacccatatcatgacgtccgaccttgcaattttgac 155  Q
    |||||||||||||| |||||||||  ||||||||||||         ||||||||| ||||||||||||| |||| || || || ||||||||||| |||    
T  2590810 gtcttagatgaagtggtaatccactgaaattaaactca---------gtgaggtccagggttcgaacccagatcacgatgttcggccttgcaatttcgac 2590900  T
Q  156 atttgccagttgagctagaacttctaga 183  Q
    |||| ||||||||| ||| |||| ||||    
T  2590901 attttccagttgagttaggacttataga 2590928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 277 - 350
Target Start/End: Original strand, 7501724 - 7501797
Alignment:
Q  277 cagcatatgtcaccagttgagtaccgtactatccttcgatatcatcttatgattccactttttcctattgatga 350  Q
    |||||||||||| |||| |||||||||||||||||| ||||||  ||||| ||||| || |||| |||||||||    
T  7501724 cagcatatgtcatcagtggagtaccgtactatccttagatatcgccttataattcctctatttcatattgatga 7501797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 82 - 186
Target Start/End: Complemental strand, 23939281 - 23939177
Alignment:
Q  82 aaattaaactcacacacaactgtgaggtcccgggttcgaacccatatcatgacgtccgaccttgcaattttgacatttgccagttgagctagaacttcta 181  Q
    |||||||||||||||| || ||||||||  ||||||  |||||  |||||||| | |||| || ||||||||| ||||| || ||||| |||||||| ||    
T  23939281 aaattaaactcacacaaaattgtgaggttacgggtttaaacccgaatcatgacattcgacgttacaattttgatatttgtcaattgagttagaacttata 23939182  T
Q  182 gactg 186  Q
    |||||    
T  23939181 gactg 23939177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 286 - 350
Target Start/End: Original strand, 52741121 - 52741185
Alignment:
Q  286 tcaccagttgagtaccgtactatccttcgatatcatcttatgattccactttttcctattgatga 350  Q
    |||||||| ||||| | |||||||||| |||| ||||||||||||||||| |||| |||||||||    
T  52741121 tcaccagtggagtatcatactatccttagataccatcttatgattccactatttcatattgatga 52741185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 113 - 180
Target Start/End: Original strand, 51112521 - 51112588
Alignment:
Q  113 gggttcgaacccatatcatgacgtccgaccttgcaattttgacatttgccagttgagctagaacttct 180  Q
    ||||||||||||   |||||||||||| ||| ||||||| | ||||||||||||||||||| ||||||    
T  51112521 gggttcgaaccccggtcatgacgtccggcctagcaatttcggcatttgccagttgagctaggacttct 51112588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 56 - 185
Target Start/End: Original strand, 8137633 - 8137760
Alignment:
Q  56 gtcttagatgaagtcgtaatccacataaattaaactcacacacaactgtgaggtcccgggttcgaacccatatcatgacgtccgaccttgcaattttgac 155  Q
    ||||||||| |||| |||| |||   ||||||||||||||||  ||||||||||  | | ||| ||| |   |||||||||||||||||||||||||  |    
T  8137633 gtcttagataaagtggtaagccattgaaattaaactcacaca--actgtgaggtttcagattcaaactcgggtcatgacgtccgaccttgcaatttttgc 8137730  T
Q  156 atttgccagttgagctagaacttctagact 185  Q
    |||||  |||||||||||||| | ||||||    
T  8137731 atttgttagttgagctagaacgtatagact 8137760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 56 - 181
Target Start/End: Original strand, 31305744 - 31305868
Alignment:
Q  56 gtcttagatgaagtcgtaatccacataaattaaactcacacacaactgtgaggtcccgggttcgaacccatatcatgacgtccgaccttgcaattttgac 155  Q
    ||||||||| ||||  ||| | || |||||| ||| |||||||||||||||| |  | ||||||||  || ||||||| || | |||||||||||| |||    
T  31305744 gtcttagataaagtgataaactacttaaatttaacacacacacaactgtgagttttcaggttcgaagtca-atcatgatgttctaccttgcaatttcgac 31305842  T
Q  156 atttgccagttgagctagaacttcta 181  Q
    |||||||| ||||||||  |||||||    
T  31305843 atttgccaattgagctaagacttcta 31305868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 56 - 185
Target Start/End: Original strand, 32001424 - 32001553
Alignment:
Q  56 gtcttagatgaagtcgtaatccacataaattaaactcacacacaactgtgaggtcccgggttcgaacccatatcatgacgtccgaccttgcaattttgac 155  Q
    |||||| ||||||| ||||  |||  ||| |||||||||||||||||||||| || || |||||||||    ||| || || || |||| |||||| | |    
T  32001424 gtcttatatgaagtggtaaatcactgaaaataaactcacacacaactgtgagatctcgagttcgaacctggttcaagatgttcggccttacaatttcggc 32001523  T
Q  156 atttgccagttgagctagaacttctagact 185  Q
    |||| ||||||||| ||| |||||||||||    
T  32001524 atttaccagttgaggtaggacttctagact 32001553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 72 - 125
Target Start/End: Complemental strand, 43023747 - 43023694
Alignment:
Q  72 taatccacataaattaaactcacacacaactgtgaggtcccgggttcgaaccca 125  Q
    |||||||| ||||||||||||||||| || |||||||| |||| ||||||||||    
T  43023747 taatccacttaaattaaactcacacataaatgtgaggttccggattcgaaccca 43023694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 56 - 184
Target Start/End: Complemental strand, 28458790 - 28458663
Alignment:
Q  56 gtcttagatgaagtcgtaatccacataaattaaactcacacacaactgtgaggtcccgggttcgaacccatatcatgacgtccgaccttgcaattttgac 155  Q
    |||||||||||||| |||||  |   || ||||||| |||| |||||||||||| | |||||| ||||   |||| ||| || | ||||||||||| |||    
T  28458790 gtcttagatgaagtggtaatttattgaagttaaacttacacgcaactgtgaggttctgggttcaaaccgg-atcacgacatctggccttgcaatttcgac 28458692  T
Q  156 atttgccagttgagctagaacttctagac 184  Q
    ||||| |||||||| ||| ||||||||||    
T  28458691 atttgtcagttgagttaggacttctagac 28458663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 82 - 151
Target Start/End: Complemental strand, 8151450 - 8151381
Alignment:
Q  82 aaattaaactcacacacaactgtgaggtcccgggttcgaacccatatcatgacgtccgaccttgcaattt 151  Q
    |||||||||| ||||| ||||||||| || |||||||||||||  |||| ||||| || | |||||||||    
T  8151450 aaattaaactgacacataactgtgagatctcgggttcgaacccggatcacgacgttcgtctttgcaattt 8151381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 116 - 183
Target Start/End: Complemental strand, 28731915 - 28731847
Alignment:
Q  116 ttcgaacccatatcatgacgtccgaccttgcaattttgacattt-gccagttgagctagaacttctaga 183  Q
    |||||||||  |||||| | ||||||||  |||||| ||||||| | ||||||||||||||||||||||    
T  28731915 ttcgaaccccgatcatggcatccgacctaacaatttcgacattttgtcagttgagctagaacttctaga 28731847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 113 - 180
Target Start/End: Original strand, 47410809 - 47410877
Alignment:
Q  113 gggttcgaacccatatcatgacgtccgaccttgcaattttgacattt-gccagttgagctagaacttct 180  Q
    ||||||||||||   ||||||| ||||||||  |||||| ||||||| |||||||||||||| ||||||    
T  47410809 gggttcgaaccccggtcatgacatccgacctaacaatttcgacattttgccagttgagctaggacttct 47410877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 132 - 180
Target Start/End: Complemental strand, 47770377 - 47770329
Alignment:
Q  132 gacgtccgaccttgcaattttgacatttgccagttgagctagaacttct 180  Q
    ||||||||| |||||||||| |||||||  |||||||||||| ||||||    
T  47770377 gacgtccgagcttgcaatttcgacatttatcagttgagctaggacttct 47770329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 89; Significance: 8e-43; HSPs: 58)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 56 - 184
Target Start/End: Complemental strand, 1174079 - 1173951
Alignment:
Q  56 gtcttagatgaagtcgtaatccacataaattaaactcacacacaactgtgaggtcccgggttcgaacccatatcatgacgtccgaccttgcaattttgac 155  Q
    |||||||||||||| |||||||||  ||| ||||||||||||||||||||||||||||||||||||||||  |||||||||||| ||||||||||| | |    
T  1174079 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccaggtcatgacgtccggccttgcaatttcggc 1173980  T
Q  156 atttgccagttgagctagaacttctagac 184  Q
    |||||||||||||||||| ||||||||||    
T  1173979 atttgccagttgagctaggacttctagac 1173951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 56 - 184
Target Start/End: Original strand, 43139906 - 43140034
Alignment:
Q  56 gtcttagatgaagtcgtaatccacataaattaaactcacacacaactgtgaggtcccgggttcgaacccatatcatgacgtccgaccttgcaattttgac 155  Q
    |||||||||||||| |||||||||  ||| |||||||||||||||||||||||||||||||||||||||   |||||||||||| ||||||||||| | |    
T  43139906 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgacgtccggccttgcaatttcggc 43140005  T
Q  156 atttgccagttgagctagaacttctagac 184  Q
    |||||||||||||||||||||||||||||    
T  43140006 atttgccagttgagctagaacttctagac 43140034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 56 - 185
Target Start/End: Complemental strand, 34739408 - 34739279
Alignment:
Q  56 gtcttagatgaagtcgtaatccacataaattaaactcacacacaactgtgaggtcccgggttcgaacccatatcatgacgtccgaccttgcaattttgac 155  Q
    |||||||||||||| |||||||||  ||| |||||||||||||||||||||||||||||||||||||||   |||||||||||| ||||||||||| | |    
T  34739408 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgacgtccggccttgcaatttcggc 34739309  T
Q  156 atttgccagttgagctagaacttctagact 185  Q
    |||||||||||||||||| |||||||||||    
T  34739308 atttgccagttgagctaggacttctagact 34739279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 56 - 184
Target Start/End: Complemental strand, 53457952 - 53457824
Alignment:
Q  56 gtcttagatgaagtcgtaatccacataaattaaactcacacacaactgtgaggtcccgggttcgaacccatatcatgacgtccgaccttgcaattttgac 155  Q
    |||||||||||||| |||||||||  ||| ||||||||||||||||||||||||||||| |||||||||   |||||||||||||||||||||||| | |    
T  53457952 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccggattcgaacccgggtcatgacgtccgaccttgcaatttcggc 53457853  T
Q  156 atttgccagttgagctagaacttctagac 184  Q
    |||||||||||||||||| ||||||||||    
T  53457852 atttgccagttgagctaggacttctagac 53457824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 56 - 185
Target Start/End: Original strand, 26424858 - 26424986
Alignment:
Q  56 gtcttagatgaagtcgtaatccacataaattaaactcacacacaactgtgaggtcccgggttcgaacccatatcatgacgtccgaccttgcaattttgac 155  Q
    |||||||||||||| |||||||||  ||| |||||||||||||||||||||||||||||||||||||||   |||||||||||| ||||||||||| | |    
T  26424858 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgacgtccg-ccttgcaatttcggc 26424956  T
Q  156 atttgccagttgagctagaacttctagact 185  Q
    |||||||||||||||||| |||||||||||    
T  26424957 atttgccagttgagctaggacttctagact 26424986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 56 - 184
Target Start/End: Complemental strand, 18257457 - 18257329
Alignment:
Q  56 gtcttagatgaagtcgtaatccacataaattaaactcacacacaactgtgaggtcccgggttcgaacccatatcatgacgtccgaccttgcaattttgac 155  Q
    |||||||||||||| |||||||||  ||| ||||||||| |||||||||||||||||||| ||||||||  ||||||||||||| ||||||||||| | |    
T  18257457 gtcttagatgaagtggtaatccactgaaaataaactcacgcacaactgtgaggtcccgggctcgaacccggatcatgacgtccggccttgcaatttcggc 18257358  T
Q  156 atttgccagttgagctagaacttctagac 184  Q
    |||||||||||||||||| ||||||||||    
T  18257357 atttgccagttgagctaggacttctagac 18257329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 56 - 185
Target Start/End: Original strand, 19849503 - 19849632
Alignment:
Q  56 gtcttagatgaagtcgtaatccacataaattaaactcacacacaactgtgaggtcccgggttcgaacccatatcatgacgtccgaccttgcaattttgac 155  Q
    |||||||||||||| |||| |||   ||| |||||||||||||||||||||||||||||||||||||||  |||| |||||||| ||||||||||| | |    
T  19849503 gtcttagatgaagtggtaaaccattgaaaataaactcacacacaactgtgaggtcccgggttcgaacccggatcacgacgtccggccttgcaatttcggc 19849602  T
Q  156 atttgccagttgagctagaacttctagact 185  Q
    |||||||||||||||||| |||||||||||    
T  19849603 atttgccagttgagctaggacttctagact 19849632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 56 - 184
Target Start/End: Complemental strand, 45874183 - 45874055
Alignment:
Q  56 gtcttagatgaagtcgtaatccacataaattaaactcacacacaactgtgaggtcccgggttcgaacccatatcatgacgtccgaccttgcaattttgac 155  Q
    |||||||||||||| |||||||||  ||| |||||||||||||||||||||||||||||||||||||||   |||  ||||||| ||||||||||||| |    
T  45874183 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccgggtcacaacgtccggccttgcaattttggc 45874084  T
Q  156 atttgccagttgagctagaacttctagac 184  Q
    ||||| |||||||||||| ||||||||||    
T  45874083 atttgtcagttgagctaggacttctagac 45874055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 56 - 184
Target Start/End: Original strand, 238458 - 238586
Alignment:
Q  56 gtcttagatgaagtcgtaatccacataaattaaactcacacacaactgtgaggtcccgggttcgaacccatatcatgacgtccgaccttgcaattttgac 155  Q
    ||||| |||||||| |||||||||  ||| ||||||||||||||||||||||||||||||||||||||||  ||||| |||||  ||||||||||| | |    
T  238458 gtcttcgatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccaggtcatggcgtccagccttgcaatttcggc 238557  T
Q  156 atttgccagttgagctagaacttctagac 184  Q
    ||||| |||||||||||| ||||||||||    
T  238558 atttgacagttgagctaggacttctagac 238586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 56 - 184
Target Start/End: Original strand, 28798388 - 28798516
Alignment:
Q  56 gtcttagatgaagtcgtaatccacataaattaaactcacacacaactgtgaggtcccgggttcgaacccatatcatgacgtccgaccttgcaattttgac 155  Q
    |||||||||||||| |||||||||  ||| ||||||||||||||||||| |||||||||||||||||||   ||| |||||||| ||||||||||| | |    
T  28798388 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtaaggtcccgggttcgaacccgggtcacgacgtccggccttgcaatttcggc 28798487  T
Q  156 atttgccagttgagctagaacttctagac 184  Q
    ||||||||||||| |||| ||||||||||    
T  28798488 atttgccagttgaactaggacttctagac 28798516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 56 - 184
Target Start/End: Original strand, 54768432 - 54768560
Alignment:
Q  56 gtcttagatgaagtcgtaatccacataaattaaactcacacacaactgtgaggtcccgggttcgaacccatatcatgacgtccgaccttgcaattttgac 155  Q
    |||||||||||||| |||||||||  |||  |||||| |||||||||||||||||| ||||||||||||   |||||||||||| ||||||||||| | |    
T  54768432 gtcttagatgaagtggtaatccactgaaaaaaaactcgcacacaactgtgaggtcctgggttcgaacccgggtcatgacgtccggccttgcaatttcggc 54768531  T
Q  156 atttgccagttgagctagaacttctagac 184  Q
    |||||||||||||||||| ||||||||||    
T  54768532 atttgccagttgagctaggacttctagac 54768560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 56 - 184
Target Start/End: Complemental strand, 12867969 - 12867841
Alignment:
Q  56 gtcttagatgaagtcgtaatccacataaattaaactcacacacaactgtgaggtcccgggttcgaacccatatcatgacgtccgaccttgcaattttgac 155  Q
    |||||||||||||| |||||||||  ||| ||||||||| |||||||||||| |||| ||||||||| |   ||| |||||||||||||||||||| | |    
T  12867969 gtcttagatgaagtggtaatccactgaaaataaactcactcacaactgtgagatcccaggttcgaactcgggtcacgacgtccgaccttgcaatttcggc 12867870  T
Q  156 atttgccagttgagctagaacttctagac 184  Q
    ||||| |||||||||||||||||||||||    
T  12867869 atttgacagttgagctagaacttctagac 12867841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 56 - 182
Target Start/End: Complemental strand, 19225387 - 19225261
Alignment:
Q  56 gtcttagatgaagtcgtaatccacataaattaaactcacacacaactgtgaggtcccgggttcgaacccatatcatgacgtccgaccttgcaattttgac 155  Q
    |||||||||||||| |||| ||||  ||| ||||||||| ||||| |||||||||||||||||||||||  ||||||||||||| | || |||||| | |    
T  19225387 gtcttagatgaagtggtaaaccactgaaactaaactcacgcacaattgtgaggtcccgggttcgaacccggatcatgacgtccggctttacaatttcggc 19225288  T
Q  156 atttgccagttgagctagaacttctag 182  Q
    |||||||||||||||||| ||||||||    
T  19225287 atttgccagttgagctaggacttctag 19225261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 56 - 181
Target Start/End: Complemental strand, 22608113 - 22607988
Alignment:
Q  56 gtcttagatgaagtcgtaatccacataaattaaactcacacacaactgtgaggtcccgggttcgaacccatatcatgacgtccgaccttgcaattttgac 155  Q
    |||| ||||||||| ||||||||   |||||||||||| ||||||||||||||||||||||||||||||   ||| |||||||| ||||||||||| |||    
T  22608113 gtctcagatgaagtagtaatccattgaaattaaactcagacacaactgtgaggtcccgggttcgaacccgggtcacgacgtccggccttgcaatttcgac 22608014  T
Q  156 atttgccagttgagctagaacttcta 181  Q
    || || |||||||||||| |||||||    
T  22608013 atctgtcagttgagctaggacttcta 22607988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 56 - 173
Target Start/End: Original strand, 23417483 - 23417600
Alignment:
Q  56 gtcttagatgaagtcgtaatccacataaattaaactcacacacaactgtgaggtcccgggttcgaacccatatcatgacgtccgaccttgcaattttgac 155  Q
    |||||||||||||| |||||||||  ||| ||||||||||||||||||| | |||||||||||||||||   |||  ||||||| ||||||||||||| |    
T  23417483 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtaaagtcccgggttcgaacccgggtcacaacgtccggccttgcaattttggc 23417582  T
Q  156 atttgccagttgagctag 173  Q
    ||||||||||||||||||    
T  23417583 atttgccagttgagctag 23417600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 56 - 184
Target Start/End: Complemental strand, 12735559 - 12735431
Alignment:
Q  56 gtcttagatgaagtcgtaatccacataaattaaactcacacacaactgtgaggtcccgggttcgaacccatatcatgacgtccgaccttgcaattttgac 155  Q
    |||||||||||||| |||||||||  ||| |||||||||||||||||||||||||| ||||||||||||   |||  ||||| | |||| |||||||| |    
T  12735559 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcctgggttcgaacccgggtcacaacgtctggccttacaattttggc 12735460  T
Q  156 atttgccagttgagctagaacttctagac 184  Q
    ||||| |||||||||||| ||||||||||    
T  12735459 atttgtcagttgagctagtacttctagac 12735431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 56 - 180
Target Start/End: Original strand, 29581044 - 29581167
Alignment:
Q  56 gtcttagatgaagtcgtaatccacataaattaaactcacacacaactgtgaggtcccgggttcgaacccatatcatgacgtccgaccttgcaattttgac 155  Q
    |||||||||||||| ||||||||| |||||||||||||||||||||||||||||| |||||||||||| |  ||| |||||||| ||||||||||| | |    
T  29581044 gtcttagatgaagtggtaatccac-taaattaaactcacacacaactgtgaggtctcgggttcgaacctaggtcacgacgtccggccttgcaatttcggc 29581142  T
Q  156 atttgccagttgagctagaacttct 180  Q
    || || || ||||||||| ||||||    
T  29581143 atctgacaattgagctaggacttct 29581167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 57 - 185
Target Start/End: Complemental strand, 55214779 - 55214651
Alignment:
Q  57 tcttagatgaagtcgtaatccacataaattaaactcacacacaactgtgaggtcccgggttcgaacccatatcatgacgtccgaccttgcaattttgaca 156  Q
    |||||||| |||| |||||||||  ||| |||||||| ||||||||||||||||||||||||||||||   ||| |||||||| ||||||||||||| ||    
T  55214779 tcttagataaagtggtaatccactgaaaataaactcatacacaactgtgaggtcccgggttcgaacccgggtcacgacgtccggccttgcaattttggca 55214680  T
Q  157 tttgccagttgagctagaacttctagact 185  Q
    |||| |||||||| ||  |||||||||||    
T  55214679 tttgacagttgagttaagacttctagact 55214651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 57 - 184
Target Start/End: Complemental strand, 12767214 - 12767087
Alignment:
Q  57 tcttagatgaagtcgtaatccacataaattaaactcacacacaactgtgaggtcccgggttcgaacccatatcatgacgtccgaccttgcaattttgaca 156  Q
    ||||||||||||  |||| |||   ||||||||||||||||||||||||||||  ||| |||||||||| |||||||||||||| ||| |||||| | ||    
T  12767214 tcttagatgaagcagtaaaccagtgaaattaaactcacacacaactgtgaggtttcggattcgaacccagatcatgacgtccgatcttacaatttcggca 12767115  T
Q  157 tttgccagttgagctagaacttctagac 184  Q
    ||| ||||||||||||| ||||||||||    
T  12767114 tttaccagttgagctaggacttctagac 12767087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 82 - 169
Target Start/End: Complemental strand, 2075607 - 2075521
Alignment:
Q  82 aaattaaactcacacacaactgtgaggtcccgggttcgaacccatatcatgacgtccgaccttgcaattttgacatttgccagttgag 169  Q
    |||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||| |||||||| ||||| ||||| ||||||||    
T  2075607 aaattaaactcacacataactgtgaggtcccgggttcgaacccaaatcatgacgtccgcccttgcaa-tttgatatttggcagttgag 2075521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 56 - 184
Target Start/End: Complemental strand, 11278106 - 11277982
Alignment:
Q  56 gtcttagatgaagtcgtaatccacataaattaaactcacacacaactgtgaggtcccgggttcgaacccatatcatgacgtccgaccttgcaattttgac 155  Q
    |||||||||||||| |||| ||||  ||||||||||||||    |||||||||||||||||| ||||||   |||||| ||||| ||||||||||| | |    
T  11278106 gtcttagatgaagtggtaaaccactgaaattaaactcaca----actgtgaggtcccgggtttgaacccgggtcatgatgtccggccttgcaatttcggc 11278011  T
Q  156 atttgccagttgagctagaacttctagac 184  Q
    |||||||||||||||||| ||||||||||    
T  11278010 atttgccagttgagctaggacttctagac 11277982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 91 - 185
Target Start/End: Original strand, 32441119 - 32441213
Alignment:
Q  91 tcacacacaactgtgaggtcccgggttcgaacccatatcatgacgtccgaccttgcaattttgacatttgccagttgagctagaacttctagact 185  Q
    |||| |||||||||||||||||||||||||||||   |||||| ||| | ||||||||||| ||||||||||||||||||||| |||||||||||    
T  32441119 tcacgcacaactgtgaggtcccgggttcgaacccgggtcatgatgtctggccttgcaatttcgacatttgccagttgagctaggacttctagact 32441213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 56 - 185
Target Start/End: Complemental strand, 55400356 - 55400227
Alignment:
Q  56 gtcttagatgaagtcgtaatccacataaattaaactcacacacaactgtgaggtcccgggttcgaacccatatcatgacgtccgaccttgcaattttgac 155  Q
    |||||||||||||| |||||||||  ||| |||||||||| |||||| |||||| ||| ||||||| ||  ||||||||||||| ||||||||||| | |    
T  55400356 gtcttagatgaagtggtaatccactgaaaataaactcacatacaactatgaggttccgagttcgaatccggatcatgacgtccggccttgcaatttcggc 55400257  T
Q  156 atttgccagttgagctagaacttctagact 185  Q
    |||| ||||||||| ||| | |||||||||    
T  55400256 atttaccagttgagttaggatttctagact 55400227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 56 - 184
Target Start/End: Original strand, 19673929 - 19674057
Alignment:
Q  56 gtcttagatgaagtcgtaatccacataaattaaactcacacacaactgtgaggtcccgggttcgaacccatatcatgacgtccgaccttgcaattttgac 155  Q
    |||||| ||||||| |||||||||  ||||||||||| |||| || ||||||||||||||||||||||||  |||  |||| || |||||||||||  ||    
T  19673929 gtcttaaatgaagtggtaatccactgaaattaaactcgcacataattgtgaggtcccgggttcgaacccaggtcacaacgttcggccttgcaatttctac 19674028  T
Q  156 atttgccagttgagctagaacttctagac 184  Q
    |||| ||||||||||||  ||||||||||    
T  19674029 atttaccagttgagctaagacttctagac 19674057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 60 - 184
Target Start/End: Original strand, 23710337 - 23710461
Alignment:
Q  60 tagatgaagtcgtaatccacataaattaaactcacacacaactgtgaggtcccgggttcgaacccatatcatgacgtccgaccttgcaattttgacattt 159  Q
    |||||||||| |||||||||  |||||||||||||||  ||||||||||| || |||||||| ||   ||| |||||||| ||||||||||| |||||||    
T  23710337 tagatgaagtggtaatccactgaaattaaactcacacgtaactgtgaggttccaggttcgaatccgggtcacgacgtccggccttgcaatttcgacattt 23710436  T
Q  160 gccagttgagctagaacttctagac 184  Q
     ||||||||||||  ||||||||||    
T  23710437 accagttgagctatgacttctagac 23710461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 56 - 152
Target Start/End: Complemental strand, 33770696 - 33770600
Alignment:
Q  56 gtcttagatgaagtcgtaatccacataaattaaactcacacacaactgtgaggtcccgggttcgaacccatatcatgacgtccgaccttgcaatttt 152  Q
    |||||||||||||  |||| ||||  ||||||||||||||||||||| ||| |||||||||||||||||| |||||||||| ||||||| |||||||    
T  33770696 gtcttagatgaagcggtaaaccactgaaattaaactcacacacaactatgaagtcccgggttcgaacccaaatcatgacgttcgaccttacaatttt 33770600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 82 - 184
Target Start/End: Complemental strand, 37134150 - 37134048
Alignment:
Q  82 aaattaaactcacacacaactgtgaggtcccgggttcgaacccatatcatgacgtccgaccttgcaattttgacatttgccagttgagctagaacttcta 181  Q
    ||||||||||||||||||||||||| ||  |||||||||||||  |||||||| |||||||||| |||||   |||||||||||||| |||| |||||||    
T  37134150 aaattaaactcacacacaactgtgaagtttcgggttcgaacccggatcatgacatccgaccttgtaatttcagcatttgccagttgaactaggacttcta 37134051  T
Q  182 gac 184  Q
    |||    
T  37134050 gac 37134048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 223 - 350
Target Start/End: Complemental strand, 16958111 - 16957985
Alignment:
Q  223 caagcaccacatgctcaagattttcttccagctattccaattgatggattaggtcagcatatgtcaccagttgagtaccgtactatccttcgatatcatc 322  Q
    |||||| ||||||||| ||||||||||| |||||| |  |||||||| | ||| ||||||||||||||||| || ||| ||||||||||| |||||   |    
T  16958111 caagcagcacatgctctagattttcttctagctatcctcattgatgggtaaggccagcatatgtcaccagtggattactgtactatccttagatat-gcc 16958013  T
Q  323 ttatgattccactttttcctattgatga 350  Q
    ||||||||||||| ||| ||||||||||    
T  16958012 ttatgattccactattttctattgatga 16957985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 60 - 181
Target Start/End: Complemental strand, 19814229 - 19814108
Alignment:
Q  60 tagatgaagtcgtaatccacataaattaaactcacacacaactgtgaggtcccgggttcgaacccatatcatgacgtccgaccttgcaattttgacattt 159  Q
    |||||||||| |||||| ||  |||||||||||||||| || ||||||||||| |||| |||||||  ||| |||||||| |||| ||||||   |||||    
T  19814229 tagatgaagtggtaatcaactgaaattaaactcacacataattgtgaggtcccaggtttgaacccaggtcacgacgtccggccttacaatttctgcattt 19814130  T
Q  160 gccagttgagctagaacttcta 181  Q
    |||||||||||||  |||||||    
T  19814129 gccagttgagctaagacttcta 19814108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 56 - 184
Target Start/End: Complemental strand, 31015110 - 31014982
Alignment:
Q  56 gtcttagatgaagtcgtaatccacataaattaaactcacacacaactgtgaggtcccgggttcgaacccatatcatgacgtccgaccttgcaattttgac 155  Q
    |||||||||||||| ||||  |||  |||||||||||||||||||||||||||| | |  |||||||||  ||||||| |||||||||| ||||||  |     
T  31015110 gtcttagatgaagtggtaaagcactgaaattaaactcacacacaactgtgaggttctgaattcgaacccgaatcatgatgtccgaccttacaatttccat 31015011  T
Q  156 atttgccagttgagctagaacttctagac 184  Q
    ||||  |||||||||||  ||||||||||    
T  31015010 atttagcagttgagctatgacttctagac 31014982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 230 - 350
Target Start/End: Original strand, 56461652 - 56461772
Alignment:
Q  230 cacatgctcaagattttcttccagctattccaattgatggattaggtcagcatatgtcaccagttgagtaccgtactatccttcgatatcatcttatgat 329  Q
    ||||||||||||||||| ||| ||||||   ||||||| | |||||||| ||||| |||||| | ||||| ||||| |||||| ||||| | ||||||||    
T  56461652 cacatgctcaagatttttttctagctatcataattgattggttaggtcatcatatatcaccaatggagtatcgtaccatccttagatataaccttatgat 56461751  T
Q  330 tccactttttcctattgatga 350  Q
    |||||| ||| ||||||||||    
T  56461752 tccactattttctattgatga 56461772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 56 - 123
Target Start/End: Complemental strand, 1966678 - 1966611
Alignment:
Q  56 gtcttagatgaagtcgtaatccacataaattaaactcacacacaactgtgaggtcccgggttcgaacc 123  Q
    |||||||||||||| |||||||||  ||||||||||||||||||||||||||||||||  ||||||||    
T  1966678 gtcttagatgaagttgtaatccactgaaattaaactcacacacaactgtgaggtcccgaattcgaacc 1966611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 56 - 171
Target Start/End: Original strand, 52171990 - 52172105
Alignment:
Q  56 gtcttagatgaagtcgtaatccacataaattaaactcacacacaactgtgaggtcccgggttcgaacccatatcatgacgtccgaccttgcaattttgac 155  Q
    |||||| || |||| |||||||||  ||||||||||||||||||| |||||||| |  ||||| |||||  |||| |||||| | |||| ||||||||||    
T  52171990 gtcttaaataaagtggtaatccactgaaattaaactcacacacaattgtgaggttctaggttcaaacccgaatcacgacgtctggccttacaattttgac 52172089  T
Q  156 atttgccagttgagct 171  Q
    |||||||| |||||||    
T  52172090 atttgccaattgagct 52172105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 56 - 185
Target Start/End: Complemental strand, 51287730 - 51287600
Alignment:
Q  56 gtcttagatgaagtcgtaatccacataaattaaa-ctcacacacaactgtgaggtcccgggttcgaacccatatcatgacgtccgaccttgcaattttga 154  Q
    |||||||||||| | ||||| |||  |||||||| ||||||||||||||||||||  ||||||  |||||| |||| |||||| |||||| ||||||||     
T  51287730 gtcttagatgaaatggtaattcactgaaattaaaactcacacacaactgtgaggtttcgggtttaaacccagatcacgacgtctgaccttacaattttgg 51287631  T
Q  155 catttgccagttgagctagaacttctagact 185  Q
    |||||| ||| ||||||   |||||||||||    
T  51287630 catttgtcagctgagctgtgacttctagact 51287600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 82 - 170
Target Start/End: Original strand, 22910283 - 22910371
Alignment:
Q  82 aaattaaactcacacacaactgtgaggtcccgggttcgaacccatatcatgacgtccgaccttgcaattttgacatttgccagttgagc 170  Q
    |||||||||| | ||||||||||||| |||| |||||||||||   ||| |||||||||||||||||||| ||| |||| |||||||||    
T  22910283 aaattaaacttagacacaactgtgagatcccaggttcgaacccgggtcacgacgtccgaccttgcaatttcgacttttgtcagttgagc 22910371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 82 - 170
Target Start/End: Complemental strand, 22968239 - 22968151
Alignment:
Q  82 aaattaaactcacacacaactgtgaggtcccgggttcgaacccatatcatgacgtccgaccttgcaattttgacatttgccagttgagc 170  Q
    |||||||||| | ||||||||||||| |||| |||||||||||   ||| |||||||||||||||||||| ||| |||| |||||||||    
T  22968239 aaattaaacttagacacaactgtgagatcccaggttcgaacccgggtcacgacgtccgaccttgcaatttcgacttttgtcagttgagc 22968151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 56 - 184
Target Start/End: Original strand, 50347329 - 50347457
Alignment:
Q  56 gtcttagatgaagtcgtaatccacataaattaaactcacacacaactgtgaggtcccgggttcgaacccatatcatgacgtccgaccttgcaattttgac 155  Q
    ||||||||||| || |||||||||  |||||||||||||||||| |||| | ||||||| ||  | |||| |||| ||||| |  | |||||| ||||||    
T  50347329 gtcttagatgaggtggtaatccactgaaattaaactcacacacatctgtaatgtcccggattataccccagatcacgacgttcagctttgcaactttgac 50347428  T
Q  156 atttgccagttgagctagaacttctagac 184  Q
    |||  ||||||||||||| ||||||||||    
T  50347429 attgaccagttgagctaggacttctagac 50347457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 233 - 344
Target Start/End: Complemental strand, 32335417 - 32335307
Alignment:
Q  233 atgctcaagattttcttccagctattccaattgatggattaggtcagcatatgtcaccagttgagtaccgtactatccttcgatatcatcttatgattcc 332  Q
    ||||||| |||||||||| |||||| || ||||||||||||||||| |||||||||  ||| ||||||| |||||| ||| ||||||  | |||||||||    
T  32335417 atgctcatgattttcttctagctatccctattgatggattaggtcatcatatgtcattagtggagtaccatactat-cttagatatcgccgtatgattcc 32335319  T
Q  333 actttttcctat 344  Q
    | | ||||||||    
T  32335318 aatatttcctat 32335307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 57 - 183
Target Start/End: Original strand, 516457 - 516583
Alignment:
Q  57 tcttagatgaagtcgtaatccacataaattaaactcacacacaactgtgaggtcccgggttcgaacccatatcatgacgtccgaccttgcaattttgaca 156  Q
    ||||||||||||  |||||||||  ||| ||||||||||||||| |||||| ||| |||||| ||| |   |||  |||||| ||||||||||||||| |    
T  516457 tcttagatgaagctgtaatccaccgaaaataaactcacacacaattgtgagatcctgggttcaaactcgagtcacaacgtccaaccttgcaattttgata 516556  T
Q  157 tttgccagttgagctagaacttctaga 183  Q
    ||||   |||||| |||||||||||||    
T  516557 tttgttggttgagttagaacttctaga 516583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 82 - 184
Target Start/End: Original strand, 2864774 - 2864876
Alignment:
Q  82 aaattaaactcacacacaactgtgaggtcccgggttcgaacccatatcatgacgtccgaccttgcaattttgacatttgccagttgagctagaacttcta 181  Q
    ||||||| ||||||||||||| |||||| |  |||||||||||   ||| |||||||  ||||||||||| | ||||||||||||||| ||| |||||||    
T  2864774 aaattaagctcacacacaactctgaggttctaggttcgaacccgggtcacgacgtcccgccttgcaatttaggcatttgccagttgagttaggacttcta 2864873  T
Q  182 gac 184  Q
    |||    
T  2864874 gac 2864876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 65 - 122
Target Start/End: Complemental strand, 39807963 - 39807906
Alignment:
Q  65 gaagtcgtaatccacataaattaaactcacacacaactgtgaggtcccgggttcgaac 122  Q
    ||||| |||||||||  |||||||||||||||||||||||||||||||| ||||||||    
T  39807963 gaagtggtaatccactgaaattaaactcacacacaactgtgaggtcccgagttcgaac 39807906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 70 - 163
Target Start/End: Original strand, 49030753 - 49030845
Alignment:
Q  70 cgtaatccacataaattaaactcacacacaactgtgaggtcccgggttcgaacccatatcatgacgtccgaccttgcaattttgacatttgcca 163  Q
    ||||||||||  || |||||||||||||||||| |||||| |||| ||||||| |  |||| |||||||| ||||||||||| |||||||||||    
T  49030753 cgtaatccactgaagttaaactcacacacaactatgaggttccgg-ttcgaactcggatcacgacgtccggccttgcaatttcgacatttgcca 49030845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 56 - 181
Target Start/End: Original strand, 52768301 - 52768425
Alignment:
Q  56 gtcttagatgaagtcgtaatccacataaattaaactcacacacaactgtgaggtcccgggttcgaacccatatcatgacgtccgaccttgcaattttgac 155  Q
    |||||||||||| | ||||||||   |||||||||||||||||||||||||| |||  ||||||||  |  |||| |||||||||||||||| |||   |    
T  52768301 gtcttagatgaa-tggtaatccattgaaattaaactcacacacaactgtgagatccttggttcgaattcgaatcacgacgtccgaccttgcagtttcagc 52768399  T
Q  156 atttgccagttgagctagaacttcta 181  Q
    ||||||||| | |||||| |||||||    
T  52768400 atttgccagataagctagcacttcta 52768425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 94 - 181
Target Start/End: Complemental strand, 3465842 - 3465755
Alignment:
Q  94 cacacaactgtgaggtcccgggttcgaacccatatcatgacgtccgaccttgcaattttgacatttgccagttgagctagaacttcta 181  Q
    ||||||||| |||||||||| |||||||||   ||||  ||||||| ||||||||||| || |||||| ||||||||||| |||||||    
T  3465842 cacacaactatgaggtcccgagttcgaacctggatcacaacgtccggccttgcaatttcgatatttgctagttgagctaggacttcta 3465755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 82 - 173
Target Start/End: Complemental strand, 37395726 - 37395635
Alignment:
Q  82 aaattaaactcacacacaactgtgaggtcccgggttcgaacccatatcatgacgtccgaccttgcaattttgacatttgccagttgagctag 173  Q
    |||||| |||||||||||||||||||||  | | || |||| |  |||||||||||||||||||||||||||| ||||| | ||||| ||||    
T  37395726 aaattatactcacacacaactgtgaggtttcagatttgaactcgaatcatgacgtccgaccttgcaattttgaaatttgtccgttgaactag 37395635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 94 - 168
Target Start/End: Complemental strand, 32778215 - 32778141
Alignment:
Q  94 cacacaactgtgaggtcccgggttcgaacccatatcatgacgtccgaccttgcaattttgacatttgccagttga 168  Q
    ||||||| ||||||||| || ||||||||||  |||| ||||||||||||||||||||||  ||||| |||||||    
T  32778215 cacacaattgtgaggtctcgtgttcgaacccggatcacgacgtccgaccttgcaattttggtatttgtcagttga 32778141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 56 - 125
Target Start/End: Complemental strand, 37620745 - 37620676
Alignment:
Q  56 gtcttagatgaagtcgtaatccacataaattaaactcacacacaactgtgaggtcccgggttcgaaccca 125  Q
    ||||| |||||||| |||||||||  |||||||||||||||| | ||||||  |||||||||||||||||    
T  37620745 gtctttgatgaagtggtaatccactgaaattaaactcacacaaacctgtgatatcccgggttcgaaccca 37620676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 241 - 353
Target Start/End: Original strand, 48505747 - 48505859
Alignment:
Q  241 gattttcttccagctattccaattgatggattaggtcagcatatgtcaccagttgagtaccgtactatccttcgatatcatcttatgattccactttttc 340  Q
    |||||| ||| |||||| |  |||||||| |||| ||| ||||||| | | || ||||| |||| ||||||| ||||||  |||||||||||||| ||||    
T  48505747 gatttttttctagctatccatattgatgggttagatcaacatatgttatcggtggagtatcgtattatccttagatatcgccttatgattccactatttc 48505846  T
Q  341 ctattgatgatgt 353  Q
     ||||||||||||    
T  48505847 atattgatgatgt 48505859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 132 - 183
Target Start/End: Original strand, 40292691 - 40292742
Alignment:
Q  132 gacgtccgaccttgcaattttgacatttgccagttgagctagaacttctaga 183  Q
    ||||||||||||| ||||||||||||||  |||||||| |||||||||||||    
T  40292691 gacgtccgaccttacaattttgacatttatcagttgagttagaacttctaga 40292742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 87 - 183
Target Start/End: Complemental strand, 46194346 - 46194249
Alignment:
Q  87 aaactcacacacaactgtgaggtcccgg-gttcgaacccatatcatgacgtccgaccttgcaattttgaca-tttgccagttgagctagaacttctaga 183  Q
    |||||||||||||| || ||| | |||| ||||||||||  |||||||| ||||||||  ||||||||||| ||||||||||||||||| |||| ||||    
T  46194346 aaactcacacacaagtg-gagttaccggagttcgaaccctgatcatgacatccgacctaacaattttgacattttgccagttgagctaggacttttaga 46194249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 56 - 124
Target Start/End: Original strand, 24417878 - 24417946
Alignment:
Q  56 gtcttagatgaagtcgtaatccacataaattaaactcacacacaactgtgaggtcccgggttcgaaccc 124  Q
    ||||| || ||||| |||||||||  ||||||||||||  ||||||||||||||| ||| |||||||||    
T  24417878 gtcttggaagaagtggtaatccactaaaattaaactcatccacaactgtgaggtctcggattcgaaccc 24417946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 57 - 167
Target Start/End: Complemental strand, 2804647 - 2804539
Alignment:
Q  57 tcttagatgaagtcgtaatccacataaattaaactcacacacaactgtgaggtcccgggttcgaacccatatcatgacgtccgaccttgcaattttgaca 156  Q
    ||||| ||||||| ||||||||| ||||||||||||||| | |||  | ||||||  |||||||||||   |||  |||||||||||| |||||||  ||    
T  2804647 tcttaaatgaagtggtaatccacttaaattaaactcacataaaac--taaggtcctaggttcgaacccgggtcacaacgtccgaccttacaattttagca 2804550  T
Q  157 tttgccagttg 167  Q
    |||| ||||||    
T  2804549 tttgtcagttg 2804539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 59 - 114
Target Start/End: Complemental strand, 23532172 - 23532117
Alignment:
Q  59 ttagatgaagtcgtaatccacataaattaaactcacacacaactgtgaggtcccgg 114  Q
    ||||| ||||| ||||| |||  ||||||||||||||||||||||||| |||||||    
T  23532172 ttagaagaagtggtaattcactgaaattaaactcacacacaactgtgaagtcccgg 23532117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 321 - 350
Target Start/End: Complemental strand, 3330421 - 3330392
Alignment:
Q  321 tcttatgattccactttttcctattgatga 350  Q
    ||||||||||||||||||||||||||||||    
T  3330421 tcttatgattccactttttcctattgatga 3330392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 56 - 109
Target Start/End: Complemental strand, 16555435 - 16555382
Alignment:
Q  56 gtcttagatgaagtcgtaatccacataaattaaactcacacacaactgtgaggt 109  Q
    |||||||||||||| ||||| ||   |||||||| |||||||||||||||||||    
T  16555435 gtcttagatgaagtggtaattcattaaaattaaattcacacacaactgtgaggt 16555382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 127 - 184
Target Start/End: Complemental strand, 19119201 - 19119144
Alignment:
Q  127 atcatgacgtccgaccttgcaattttgacatttgccagttgagctagaacttctagac 184  Q
    ||||||||||||| ||||| |||||||||||||  ||||||| |||  ||||||||||    
T  19119201 atcatgacgtccggccttgtaattttgacatttatcagttgaactaagacttctagac 19119144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 57 - 169
Target Start/End: Complemental strand, 1126014 - 1125902
Alignment:
Q  57 tcttagatgaagtcgtaatccacataaattaaactcacacacaactgtgaggtcccgggttcgaacccatatcatgacgtccgaccttgcaattttgaca 156  Q
    ||||||||||||| |||||  |   |||||||||||| ||||||||||||| ||  |||||| ||  || |||| ||| ||||| ||| |||||| ||||    
T  1126014 tcttagatgaagtggtaatttattgaaattaaactcatacacaactgtgagatcttgggttcaaattcaaatcacgacatccgatcttacaatttcgaca 1125915  T
Q  157 tttgccagttgag 169  Q
    |||  ||||||||    
T  1125914 tttcacagttgag 1125902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 71 - 111
Target Start/End: Original strand, 31751837 - 31751876
Alignment:
Q  71 gtaatccacataaattaaactcacacacaactgtgaggtcc 111  Q
    ||||||||| ||||||||| |||||||||||||||||||||    
T  31751837 gtaatccac-taaattaaattcacacacaactgtgaggtcc 31751876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 86; Significance: 5e-41; HSPs: 49)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 56 - 185
Target Start/End: Complemental strand, 32007202 - 32007073
Alignment:
Q  56 gtcttagatgaagtcgtaatccacataaattaaactcacacacaactgtgaggtcccgggttcgaacccatatcatgacgtccgaccttgcaattttgac 155  Q
    |||||||||||||| |||||||||  ||| |||||||||||||||||||||||||||||||||||||||   |||||||||||| ||||||||||| | |    
T  32007202 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgacgtccggccttgcaatttcggc 32007103  T
Q  156 atttgccagttgagctagaacttctagact 185  Q
    |||||||||||||||||| |||||||||||    
T  32007102 atttgccagttgagctaggacttctagact 32007073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 56 - 185
Target Start/End: Original strand, 5055788 - 5055917
Alignment:
Q  56 gtcttagatgaagtcgtaatccacataaattaaactcacacacaactgtgaggtcccgggttcgaacccatatcatgacgtccgaccttgcaattttgac 155  Q
    |||||||||||||| |||||||||  ||| |||||||||||||||||||||||||||||||||||||||   |||||||||||| ||||||||||| | |    
T  5055788 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgacgtccggccttgcaatttcggc 5055887  T
Q  156 atttgccagttgagctagaacttctagact 185  Q
    ||||||||| |||||||| |||||||||||    
T  5055888 atttgccagctgagctaggacttctagact 5055917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 56 - 184
Target Start/End: Complemental strand, 41808330 - 41808202
Alignment:
Q  56 gtcttagatgaagtcgtaatccacataaattaaactcacacacaactgtgaggtcccgggttcgaacccatatcatgacgtccgaccttgcaattttgac 155  Q
    |||||||||||||| |||||||||  ||| |||||||||||||||||||||||| ||||||||||||||   |||||||||||| ||||||||||| | |    
T  41808330 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggttccgggttcgaacccgggtcatgacgtccggccttgcaatttcggc 41808231  T
Q  156 atttgccagttgagctagaacttctagac 184  Q
    |||||||||||||||||| ||||||||||    
T  41808230 atttgccagttgagctaggacttctagac 41808202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 56 - 186
Target Start/End: Original strand, 29994383 - 29994513
Alignment:
Q  56 gtcttagatgaagtcgtaatccacataaattaaactcacacacaactgtgaggtcccgggttcgaacccatatcatgacgtccgaccttgcaattttgac 155  Q
    |||||||||||||| |||| ||||  ||||||||||||||||||| ||||||||| |||||||||||||  ||||||||||| | ||||||||||| | |    
T  29994383 gtcttagatgaagtggtaaaccactgaaattaaactcacacacaattgtgaggtctcgggttcgaacccggatcatgacgtctggccttgcaatttcggc 29994482  T
Q  156 atttgccagttgagctagaacttctagactg 186  Q
    |||||||||||||||||| ||||||||||||    
T  29994483 atttgccagttgagctaggacttctagactg 29994513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 56 - 185
Target Start/End: Complemental strand, 28456002 - 28455873
Alignment:
Q  56 gtcttagatgaagtcgtaatccacataaattaaactcacacacaactgtgaggtcccgggttcgaacccatatcatgacgtccgaccttgcaattttgac 155  Q
    |||||||||||||| |||||||||  ||| |||||||||||||||||||||||||||||||||||||||   |||  ||||||| ||||||||||| | |    
T  28456002 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccgggtcacaacgtccggccttgcaatttcggc 28455903  T
Q  156 atttgccagttgagctagaacttctagact 185  Q
    |||||||||||||||||| |||||||||||    
T  28455902 atttgccagttgagctaggacttctagact 28455873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 56 - 184
Target Start/End: Original strand, 45813011 - 45813139
Alignment:
Q  56 gtcttagatgaagtcgtaatccacataaattaaactcacacacaactgtgaggtcccgggttcgaacccatatcatgacgtccgaccttgcaattttgac 155  Q
    |||||||||||||| |||||||||  ||| |||||||||||||||||||||||||||||||||||||||   ||| || ||||||||||||||||| | |    
T  45813011 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccgggtcacgatgtccgaccttgcaatttcggc 45813110  T
Q  156 atttgccagttgagctagaacttctagac 184  Q
    ||||| |||||||||||| ||||||||||    
T  45813111 atttgtcagttgagctaggacttctagac 45813139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 56 - 184
Target Start/End: Complemental strand, 48660150 - 48660022
Alignment:
Q  56 gtcttagatgaagtcgtaatccacataaattaaactcacacacaactgtgaggtcccgggttcgaacccatatcatgacgtccgaccttgcaattttgac 155  Q
    |||||||||||||| |||||||||  ||| |||||||||||||||||||||| ||||||||||||||||   |||| ||||||| ||||||||||| | |    
T  48660150 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgagatcccgggttcgaacccgggtcataacgtccggccttgcaatttcggc 48660051  T
Q  156 atttgccagttgagctagaacttctagac 184  Q
    |||||||||||||||||| ||||||||||    
T  48660050 atttgccagttgagctaggacttctagac 48660022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 56 - 184
Target Start/End: Complemental strand, 49783835 - 49783707
Alignment:
Q  56 gtcttagatgaagtcgtaatccacataaattaaactcacacacaactgtgaggtcccgggttcgaacccatatcatgacgtccgaccttgcaattttgac 155  Q
    |||||||||||||| |||| ||||  |||||||| ||||| ||||||||||||| ||||||||||||||  |||||||||| |||||||||||||| |||    
T  49783835 gtcttagatgaagtggtaaaccactgaaattaaattcacatacaactgtgaggttccgggttcgaacccgaatcatgacgttcgaccttgcaatttcgac 49783736  T
Q  156 atttgccagttgagctagaacttctagac 184  Q
    |||||||| ||||| ||| |||| |||||    
T  49783735 atttgccaattgagttaggacttatagac 49783707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 56 - 185
Target Start/End: Complemental strand, 20876 - 20747
Alignment:
Q  56 gtcttagatgaagtcgtaatccacataaattaaactcacacacaactgtgaggtcccgggttcgaacccatatcatgacgtccgaccttgcaattttgac 155  Q
    |||||||||||||| |||||||||  ||| |||||||||||||||||||||||||||||||||||| ||   ||| | |||||  ||||||||||| | |    
T  20876 gtcttagatgaagtggtaatccactaaaaataaactcacacacaactgtgaggtcccgggttcgaatccgggtcacggcgtcctgccttgcaatttcggc 20777  T
Q  156 atttgccagttgagctagaacttctagact 185  Q
    |||||||||||||| ||| |||||||||||    
T  20776 atttgccagttgagttaggacttctagact 20747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 56 - 185
Target Start/End: Complemental strand, 192543 - 192414
Alignment:
Q  56 gtcttagatgaagtcgtaatccacataaattaaactcacacacaactgtgaggtcccgggttcgaacccatatcatgacgtccgaccttgcaattttgac 155  Q
    |||||||||||||| ||||||| |  ||| |||||||||||||||||||||||||| |||||||||| |  ||||  ||||||| ||||||||||||  |    
T  192543 gtcttagatgaagtggtaatccgctgaaaataaactcacacacaactgtgaggtcctgggttcgaacacggatcacaacgtccggccttgcaattttagc 192444  T
Q  156 atttgccagttgagctagaacttctagact 185  Q
    ||||| |||||||||||| |||||||||||    
T  192443 atttgtcagttgagctaggacttctagact 192414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 56 - 184
Target Start/End: Original strand, 41761411 - 41761539
Alignment:
Q  56 gtcttagatgaagtcgtaatccacataaattaaactcacacacaactgtgaggtcccgggttcgaacccatatcatgacgtccgaccttgcaattttgac 155  Q
    ||||| |||||||| |||||||||  ||| |||||||||||||||||||||||||| ||||||||||||   |||  ||||||| ||||||||||| | |    
T  41761411 gtcttggatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcctgggttcgaacccgggtcacaacgtccggccttgcaatttcggc 41761510  T
Q  156 atttgccagttgagctagaacttctagac 184  Q
    ||||||||||||| |||| ||||||||||    
T  41761511 atttgccagttgaactaggacttctagac 41761539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 56 - 173
Target Start/End: Complemental strand, 39276478 - 39276361
Alignment:
Q  56 gtcttagatgaagtcgtaatccacataaattaaactcacacacaactgtgaggtcccgggttcgaacccatatcatgacgtccgaccttgcaattttgac 155  Q
    |||||| ||||||| |||||||||  ||| |||||||||||| ||||||||||||||||||||||||||   |||  ||||||| ||||||||||| | |    
T  39276478 gtcttaaatgaagtggtaatccactgaaaataaactcacacataactgtgaggtcccgggttcgaacccgggtcacaacgtccggccttgcaatttcggc 39276379  T
Q  156 atttgccagttgagctag 173  Q
    ||||||||||||||||||    
T  39276378 atttgccagttgagctag 39276361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 56 - 160
Target Start/End: Complemental strand, 7059595 - 7059491
Alignment:
Q  56 gtcttagatgaagtcgtaatccacataaattaaactcacacacaactgtgaggtcccgggttcgaacccatatcatgacgtccgaccttgcaattttgac 155  Q
    ||||||||| |||| ||||||||| |||||||||||||||||||||||||||||| | | |||||||||   ||| |||||| |||||||||||||||||    
T  7059595 gtcttagataaagtggtaatccacttaaattaaactcacacacaactgtgaggtctcagattcgaacccgggtcacgacgtctgaccttgcaattttgac 7059496  T
Q  156 atttg 160  Q
    |||||    
T  7059495 atttg 7059491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 231 - 349
Target Start/End: Original strand, 28040666 - 28040784
Alignment:
Q  231 acatgctcaagattttcttccagctattccaattgatggattaggtcagcatatgtcaccagttgagtaccgtactatccttcgatatcatcttatgatt 330  Q
    |||||||||||||||||||| |||||| || |||||| | |||||||| |||||||||||||| ||||| | |||||||||| ||||||  |||||||||    
T  28040666 acatgctcaagattttcttctagctatcccgattgattggttaggtcaacatatgtcaccagtggagtatcatactatccttagatatcgccttatgatt 28040765  T
Q  331 ccactttttcctattgatg 349  Q
    ||| | ||||||| |||||    
T  28040766 ccattatttcctaatgatg 28040784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 57 - 183
Target Start/End: Complemental strand, 35945924 - 35945798
Alignment:
Q  57 tcttagatgaagtcgtaatccacataaattaaactcacacacaactgtgaggtcccgggttcgaacccatatcatgacgtccgaccttgcaattttgaca 156  Q
    ||||||||||||| |||||||||  ||| |||| ||||||||||||||||||| |||||||||||||||  |||  ||||||  |||| |||||| | ||    
T  35945924 tcttagatgaagtggtaatccactgaaaataaattcacacacaactgtgaggttccgggttcgaacccaggtcacaacgtccagccttacaatttcggca 35945825  T
Q  157 tttgccagttgagctagaacttctaga 183  Q
    ||| ||||||||||||| |||||||||    
T  35945824 tttaccagttgagctaggacttctaga 35945798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 56 - 185
Target Start/End: Complemental strand, 13109898 - 13109769
Alignment:
Q  56 gtcttagatgaagtcgtaatccacataaattaaactcacacacaactgtgaggtcccgggttcgaacccatatcatgacgtccgaccttgcaattttgac 155  Q
    |||||||||||||| |||||||||  |||||||||||||||||||||||||||| |  ||||||||  |   | | ||||||||||||||||||||   |    
T  13109898 gtcttagatgaagtggtaatccactgaaattaaactcacacacaactgtgaggttctaggttcgaattcgggttacgacgtccgaccttgcaatttaatc 13109799  T
Q  156 atttgccagttgagctagaacttctagact 185  Q
    ||||| ||||| ||||||||||||||||||    
T  13109798 atttgtcagttaagctagaacttctagact 13109769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 92 - 181
Target Start/End: Complemental strand, 29587344 - 29587255
Alignment:
Q  92 cacacacaactgtgaggtcccgggttcgaacccatatcatgacgtccgaccttgcaattttgacatttgccagttgagctagaacttcta 181  Q
    ||||||||| ||||||||||||||||||||||||  ||| |||||||| ||||||||||| | ||||||||||||||||||| |||||||    
T  29587344 cacacacaattgtgaggtcccgggttcgaacccaggtcacgacgtccggccttgcaatttcggcatttgccagttgagctaggacttcta 29587255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 59 - 184
Target Start/End: Complemental strand, 39284415 - 39284290
Alignment:
Q  59 ttagatgaagtcgtaatccacataaattaaactcacacacaactgtgaggtcccgggttcgaacccatatcatgacgtccgaccttgcaattttgacatt 158  Q
    ||||||||| | |||||||||| |||||||||||||| ||||||||||||||   |||||||||||  |||| ||||||||||||| ||||||  |||||    
T  39284415 ttagatgaaatagtaatccacaaaaattaaactcacatacaactgtgaggtcttaggttcgaacccgaatcacgacgtccgaccttacaatttcaacatt 39284316  T
Q  159 tgccagttgagctagaacttctagac 184  Q
     | |||||||||||  ||||||||||    
T  39284315 cgtcagttgagctatgacttctagac 39284290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 56 - 183
Target Start/End: Complemental strand, 5943809 - 5943682
Alignment:
Q  56 gtcttagatgaagtcgtaatccacataaattaaactcacacacaactgtgaggtcccgggttcgaacccatatcatgacgtccgaccttgcaattttgac 155  Q
    ||||||||||||||  |||||||   |||||||||||||| ||||||||||||||| | ||||||||||   ||| |||||||| ||||||||||| | |    
T  5943809 gtcttagatgaagtgataatccattgaaattaaactcacaaacaactgtgaggtcctgagttcgaacccgggtcacgacgtccggccttgcaatttcggc 5943710  T
Q  156 atttgccagttgagctagaacttctaga 183  Q
    ||||| |||||||||||| | |||||||    
T  5943709 atttgtcagttgagctaggaattctaga 5943682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 223 - 350
Target Start/End: Complemental strand, 19036003 - 19035876
Alignment:
Q  223 caagcaccacatgctcaagattttcttccagctattccaattgatggattaggtcagcatatgtcaccagttgagtaccgtactatccttcgatatcatc 322  Q
    |||||| |||||||||  |||||||||| |||||| || |||||||  |||||||| |||||||||||||| ||||| | |||||||||| ||||||  |    
T  19036003 caagcagcacatgctcgggattttcttctagctatcccgattgatgagttaggtcaacatatgtcaccagtggagtatcatactatccttagatatcgcc 19035904  T
Q  323 ttatgattccactttttcctattgatga 350  Q
    ||||||||||||| | |||| |||||||    
T  19035903 ttatgattccactatatccttttgatga 19035876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 59 - 169
Target Start/End: Complemental strand, 7275806 - 7275696
Alignment:
Q  59 ttagatgaagtcgtaatccacataaattaaactcacacacaactgtgaggtcccgggttcgaacccatatcatgacgtccgaccttgcaattttgacatt 158  Q
    ||||||||||| |||| ||||  |||||||||||| |||||||||||| || ||||||||||| ||   |||| |||||||||||| |||||| ||||||    
T  7275806 ttagatgaagtggtaaaccactgaaattaaactcatacacaactgtgaagttccgggttcgaatccgagtcataacgtccgaccttacaatttcgacatt 7275707  T
Q  159 tgccagttgag 169  Q
    |||||||||||    
T  7275706 tgccagttgag 7275696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 57 - 182
Target Start/End: Complemental strand, 21939069 - 21938944
Alignment:
Q  57 tcttagatgaagtcgtaatccacataaattaaactcacacacaactgtgaggtcccgggttcgaacccatatcatgacgtccgaccttgcaattttgaca 156  Q
    ||||||||||||| |||| || |  ||||||||||| |||||||||||||||||| || |||||| ||  |||||||| |||| |||| |||||| | ||    
T  21939069 tcttagatgaagtggtaaaccgctgaaattaaactcgcacacaactgtgaggtcctggattcgaatccggatcatgacatccggccttacaatttcggca 21938970  T
Q  157 tttgccagttgagctagaacttctag 182  Q
    ||| ||||||||||||| ||||||||    
T  21938969 tttaccagttgagctaggacttctag 21938944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 83 - 184
Target Start/End: Original strand, 46447404 - 46447505
Alignment:
Q  83 aattaaactcacacacaactgtgaggtcccgggttcgaacccatatcatgacgtccgaccttgcaattttgacatttgccagttgagctagaacttctag 182  Q
    ||||||||||||||| ||||||||||||||||||||||||||   | | ||||||   ||||||||||| | |||||||||||||| |||||||||||||    
T  46447404 aattaaactcacacataactgtgaggtcccgggttcgaacccgggttacgacgtcgagccttgcaatttcggcatttgccagttgaactagaacttctag 46447503  T
Q  183 ac 184  Q
    ||    
T  46447504 ac 46447505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 56 - 124
Target Start/End: Original strand, 41039303 - 41039371
Alignment:
Q  56 gtcttagatgaagtcgtaatccacataaattaaactcacacacaactgtgaggtcccgggttcgaaccc 124  Q
    |||||||||||||| |||||||||  ||| |||||||||||||||||||||||||||||||||||||||    
T  41039303 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaaccc 41039371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 275 - 353
Target Start/End: Complemental strand, 38732107 - 38732029
Alignment:
Q  275 gtcagcatatgtcaccagttgagtaccgtactatccttcgatatcatcttatgattccactttttcctattgatgatgt 353  Q
    |||||||||||||| |||| |||||||||||||||||| ||||||  |||||||||||||| |||||| ||||||||||    
T  38732107 gtcagcatatgtcatcagtggagtaccgtactatccttagatatcgccttatgattccactatttcctgttgatgatgt 38732029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 59 - 184
Target Start/End: Original strand, 2088908 - 2089033
Alignment:
Q  59 ttagatgaagtcgtaatccacataaattaaactcacacacaactgtgaggtcccgggttcgaacccatatcatgacgtccgaccttgcaattttgacatt 158  Q
    ||||||||||| |||||||||  ||||| |||||||| |||| |||||||| | | ||||||||||   ||| || ||| |||||| |||||| || |||    
T  2088908 ttagatgaagtggtaatccactgaaattgaactcacatacaattgtgaggttctgagttcgaacccgagtcacgatgtctgaccttacaatttcgatatt 2089007  T
Q  159 tgccagttgagctagaacttctagac 184  Q
    ||||||||||||||| ||||||||||    
T  2089008 tgccagttgagctaggacttctagac 2089033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 237 - 350
Target Start/End: Complemental strand, 34645127 - 34645015
Alignment:
Q  237 tcaagattttcttccagctattccaattgatggattaggtcagcatatgtcaccagttgagtaccgtactatccttcgatatcatcttatgattccactt 336  Q
    |||||||||| ||| |||||| | ||||||||| | || |||||||||||||| |||  ||||||||| |||||||||||||| |||||||||||||||     
T  34645127 tcaagatttt-ttctagctatcctaattgatgggtaagatcagcatatgtcactagtgaagtaccgtattatccttcgatatcgtcttatgattccacta 34645029  T
Q  337 tttcctattgatga 350  Q
    ||| ||| ||||||    
T  34645028 ttttctagtgatga 34645015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 230 - 348
Target Start/End: Original strand, 7794453 - 7794571
Alignment:
Q  230 cacatgctcaagattttcttccagctattccaattgatggattaggtcagcatatgtcaccagttgagtaccgtactatccttcgatatcatcttatgat 329  Q
    |||||||||| |||||||||  |||||| |  |||||||| |||||||| ||||| |||||||| ||||||| | |||||||| ||||||  ||||||||    
T  7794453 cacatgctcatgattttcttatagctatccttattgatgggttaggtcaacatatatcaccagtggagtaccatgctatcctttgatatcgccttatgat 7794552  T
Q  330 tccactttttcctattgat 348  Q
    |||| | |||| |||||||    
T  7794553 tccattatttcatattgat 7794571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 86 - 172
Target Start/End: Original strand, 16770186 - 16770272
Alignment:
Q  86 taaactcacacacaactgtgaggtcccgggttcgaacccatatcatgacgtccgaccttgcaattttgacatttgccagttgagcta 172  Q
    ||||||||||||||||||||||||||| | || |||| |  | |||||||||||||||| |||||| | ||||||||||||||||||    
T  16770186 taaactcacacacaactgtgaggtcccagatttgaactcgaaccatgacgtccgaccttacaatttcggcatttgccagttgagcta 16770272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 56 - 181
Target Start/End: Complemental strand, 778702 - 778578
Alignment:
Q  56 gtcttagatgaagtcgtaatccacataaattaaactcacacacaactgtgaggtcccgggttcgaacccatatcatgacgtccgaccttgcaattttgac 155  Q
    |||||||||||| | ||||| |||  ||||||||||||||||||||||| ||||||  ||||||||||    ||| ||||| |||||||| || || | |    
T  778702 gtcttagatgaattggtaattcactgaaattaaactcacacacaactgtcaggtcctaggttcgaacctgagtcacgacgttcgaccttgtaa-ttcggc 778604  T
Q  156 atttgccagttgagctagaacttcta 181  Q
    |||| |||||||||||||||||||||    
T  778603 attttccagttgagctagaacttcta 778578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 56 - 184
Target Start/End: Complemental strand, 26032929 - 26032798
Alignment:
Q  56 gtcttagatgaagtcgtaatccacataaattaaactcacacacaactgtgaggtcccgggttcgaacccatatcatgacgt---ccgaccttgcaatttt 152  Q
    |||||||||||||  |||||||||  |||||||||||||||| ||||||||||| || |||||||||||   ||| |||||   |||||||| ||||||     
T  26032929 gtcttagatgaagcggtaatccactgaaattaaactcacacaaaactgtgaggttccaggttcgaacccgggtcacgacgtccgccgaccttacaatttc 26032830  T
Q  153 gacatttgccagttgagctagaacttctagac 184  Q
    | |||||| |||||||  ||| ||||||||||    
T  26032829 ggcatttgtcagttgaattaggacttctagac 26032798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 56 - 137
Target Start/End: Original strand, 35110099 - 35110180
Alignment:
Q  56 gtcttagatgaagtcgtaatccacataaattaaactcacacacaactgtgaggtcccgggttcgaacccatatcatgacgtc 137  Q
    |||||||||||||| ||||||| |  ||||||||||||||||||||||| |||||| ||||||||||||   ||||||||||    
T  35110099 gtcttagatgaagtggtaatcctctcaaattaaactcacacacaactgtaaggtcctgggttcgaacccgggtcatgacgtc 35110180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 265 - 350
Target Start/End: Complemental strand, 37200789 - 37200704
Alignment:
Q  265 gatggattaggtcagcatatgtcaccagttgagtaccgtactatccttcgatatcatcttatgattccactttttcctattgatga 350  Q
    ||||| ||||||||||||||||||| ||| ||||| | |||||||||| ||||||  ||||| |||||||| ||||||||||||||    
T  37200789 gatgggttaggtcagcatatgtcactagtggagtatcatactatccttagatatcgccttataattccactatttcctattgatga 37200704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 94 - 168
Target Start/End: Complemental strand, 35224430 - 35224356
Alignment:
Q  94 cacacaactgtgaggtcccgggttcgaacccatatcatgacgtccgaccttgcaattttgacatttgccagttga 168  Q
    |||||||||||||||||| ||||||||||||   |||||||||||| ||||||| ||||  ||||||||||||||    
T  35224430 cacacaactgtgaggtcctgggttcgaacccgggtcatgacgtccggccttgcatttttcgcatttgccagttga 35224356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 220 - 350
Target Start/End: Complemental strand, 22375299 - 22375168
Alignment:
Q  220 tttcaagcaccacatgct--caagattttcttccagctattccaattgatggattaggtcagcatatgtcaccagttgagtaccgtactatccttcgata 317  Q
    ||||||||| ||||||||  || |||||||||| ||||||||  |||||| | |||||||| |||||||||  ||  ||||| |||||||||||| ||||    
T  22375299 tttcaagcaacacatgctatcatgattttcttctagctattcatattgatcggttaggtcaacatatgtcat-aggggagtaacgtactatccttagata 22375201  T
Q  318 tcatcttatgattccactttttcctattgatga 350  Q
    ||  |||||||||| ||| ||||||| ||||||    
T  22375200 tcgccttatgattctactatttcctactgatga 22375168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 98 - 172
Target Start/End: Complemental strand, 47111543 - 47111469
Alignment:
Q  98 caactgtgaggtcccgggttcgaacccatatcatgacgtccgaccttgcaattttgacatttgccagttgagcta 172  Q
    |||||| ||||||| |||||| ||||||  ||| |||||||||||||||||||| | |||||| |||||||||||    
T  47111543 caactgcgaggtcctgggttcaaacccaggtcacgacgtccgaccttgcaatttcggcatttgtcagttgagcta 47111469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 56 - 149
Target Start/End: Complemental strand, 13097432 - 13097339
Alignment:
Q  56 gtcttagatgaagtcgtaatccacataaattaaactcacacacaactgtgaggtcccgggttcgaacccatatcatgacgtccgaccttgcaat 149  Q
    |||||||||||||| ||||||||   |||||||||||||| ||||||||||||| |  |||| ||| ||   ||| ||||||||||||||||||    
T  13097432 gtcttagatgaagtggtaatccaataaaattaaactcacatacaactgtgaggttctaggtttgaatccgggtcacgacgtccgaccttgcaat 13097339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 60 - 124
Target Start/End: Original strand, 50106200 - 50106264
Alignment:
Q  60 tagatgaagtcgtaatccacataaattaaactcacacacaactgtgaggtcccgggttcgaaccc 124  Q
    |||||||| | | |||||||  ||| |||||||||||| ||||||||||||||||||||||||||    
T  50106200 tagatgaaatggcaatccactgaaaataaactcacacataactgtgaggtcccgggttcgaaccc 50106264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 223 - 309
Target Start/End: Complemental strand, 15585436 - 15585350
Alignment:
Q  223 caagcaccacatgctcaagattttcttccagctattccaattgatggattaggtcagcatatgtcaccagttgagtaccgtactatc 309  Q
    |||||| |||||||||||||||| |||  |||||| || |||||||| ||||| ||  ||||||||||||| |||||  ||||||||    
T  15585436 caagcaacacatgctcaagatttacttttagctatccctattgatgggttaggccaaaatatgtcaccagtagagtattgtactatc 15585350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 82 - 159
Target Start/End: Complemental strand, 3716713 - 3716636
Alignment:
Q  82 aaattaaactcacacacaactgtgaggtcccgggttcgaacccatatcatgacgtccgaccttgcaattttgacattt 159  Q
    |||||||||||||||||||||||||||| | | |||  || ||  |||||||||| || ||||||||||| |||||||    
T  3716713 aaattaaactcacacacaactgtgaggttctgagtttaaatccggatcatgacgttcggccttgcaatttcgacattt 3716636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 56 - 184
Target Start/End: Complemental strand, 4066089 - 4065961
Alignment:
Q  56 gtcttagatgaagtcgtaatccacataaattaaactcacacacaactgtgaggtcccgggttcgaacccatatcatgacgtccgaccttgcaattttgac 155  Q
    |||||||||||||| ||||| |||  |||||||||||||| |||| ||| ||||| | | |||||||||  ||||  |||| |   |||||||||| |      
T  4066089 gtcttagatgaagtggtaattcactgaaattaaactcacatacaattgtaaggtctcagattcgaacccggatcacaacgttcagtcttgcaatttcggt 4065990  T
Q  156 atttgccagttgagctagaacttctagac 184  Q
    ||||| ||||||||||||  |||||||||    
T  4065989 atttgtcagttgagctaggtcttctagac 4065961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 56 - 122
Target Start/End: Complemental strand, 3716490 - 3716424
Alignment:
Q  56 gtcttagatgaagtcgtaatccacataaattaaactcacacacaactgtgaggtcccgggttcgaac 122  Q
    |||| |||||||||   |||||||  ||| ||||||||||||||||||||||||| | |||||||||    
T  3716490 gtctaagatgaagtgacaatccactaaaaataaactcacacacaactgtgaggtctcaggttcgaac 3716424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 230 - 308
Target Start/End: Original strand, 37917632 - 37917710
Alignment:
Q  230 cacatgctcaagattttcttccagctattccaattgatggattaggtcagcatatgtcaccagttgagtaccgtactat 308  Q
    |||||||| | ||||||||||  | ||| || |||||||| ||||| ||| ||||||||| ||| ||||||||||||||    
T  37917632 cacatgcttaggattttcttcttgttatccctattgatgggttaggccagaatatgtcactagtagagtaccgtactat 37917710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 82 - 160
Target Start/End: Original strand, 38817225 - 38817303
Alignment:
Q  82 aaattaaactcacacacaactgtgaggtcccgggttcgaacccatatcatgacgtccgaccttgcaattttgacatttg 160  Q
    |||||||| |||||||||| ||||||||| ||||||||||| |  |||| ||||||||  ||| |||| | ||||||||    
T  38817225 aaattaaattcacacacaattgtgaggtctcgggttcgaactcggatcacgacgtccggtctttcaatatcgacatttg 38817303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 57 - 106
Target Start/End: Original strand, 32982351 - 32982400
Alignment:
Q  57 tcttagatgaagtcgtaatccacataaattaaactcacacacaactgtga 106  Q
    ||||||||||||| |||| ||||  |||| ||||||||||||||||||||    
T  32982351 tcttagatgaagtagtaaaccactgaaatcaaactcacacacaactgtga 32982400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 59 - 151
Target Start/End: Original strand, 13183179 - 13183271
Alignment:
Q  59 ttagatgaagtcgtaatccacataaattaaactcacacacaactgtgaggtcccgggttcgaacccatatcatgacgtccgaccttgcaattt 151  Q
    ||||||||||| ||||| |||  |||||||||||||| |||||||| |||| |  ||||| ||| |  || | || |||||||||||||||||    
T  13183179 ttagatgaagtggtaattcactgaaattaaactcacatacaactgtaaggttctaggttcaaactcggattacgatgtccgaccttgcaattt 13183271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 57 - 109
Target Start/End: Original strand, 26264537 - 26264589
Alignment:
Q  57 tcttagatgaagtcgtaatccacataaattaaactcacacacaactgtgaggt 109  Q
    |||||||||||||  |||| ||   ||||||||||||||||||||||||||||    
T  26264537 tcttagatgaagtgataatacattgaaattaaactcacacacaactgtgaggt 26264589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 113 - 178
Target Start/End: Original strand, 44836175 - 44836242
Alignment:
Q  113 gggttcgaacccatatcatgacgtccgaccttgcaattttgaca--tttgccagttgagctagaactt 178  Q
    ||||||||||||  |||||||||||||||||  ||||||||| |  ||||||||||| ||||| ||||    
T  44836175 gggttcgaaccccgatcatgacgtccgacctaacaattttgatatttttgccagttgtgctaggactt 44836242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 128 - 184
Target Start/End: Complemental strand, 45294714 - 45294658
Alignment:
Q  128 tcatgacgtccgaccttgcaattttgacatttgccagttgagctagaacttctagac 184  Q
    |||||| |||||  |||||||||| | ||||||| ||||||||||| ||||||||||    
T  45294714 tcatgatgtccggtcttgcaatttcggcatttgctagttgagctaggacttctagac 45294658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1348 (Bit Score: 85; Significance: 2e-40; HSPs: 1)
Name: scaffold1348
Description:

Target: scaffold1348; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 56 - 184
Target Start/End: Original strand, 862 - 990
Alignment:
Q  56 gtcttagatgaagtcgtaatccacataaattaaactcacacacaactgtgaggtcccgggttcgaacccatatcatgacgtccgaccttgcaattttgac 155  Q
    |||||||||||||| |||||||||  ||| |||||||||||||||||||||||||||||||||||||||   |||||||||||| ||||||||||| | |    
T  862 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgacgtccggccttgcaatttcggc 961  T
Q  156 atttgccagttgagctagaacttctagac 184  Q
    |||||||||||||||||| ||||||||||    
T  962 atttgccagttgagctaggacttctagac 990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 85; Significance: 2e-40; HSPs: 34)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 56 - 184
Target Start/End: Complemental strand, 33621622 - 33621494
Alignment:
Q  56 gtcttagatgaagtcgtaatccacataaattaaactcacacacaactgtgaggtcccgggttcgaacccatatcatgacgtccgaccttgcaattttgac 155  Q
    |||||||||||||| |||| ||||  |||||||||||||||||||||||||||||||||||||||||||   |||||||||||| ||||||||||| | |    
T  33621622 gtcttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgacgtccggccttgcaatttcggc 33621523  T
Q  156 atttgccagttgagctagaacttctagac 184  Q
    |||||||||||||||||| ||||||||||    
T  33621522 atttgccagttgagctaggacttctagac 33621494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 56 - 185
Target Start/End: Complemental strand, 4464255 - 4464126
Alignment:
Q  56 gtcttagatgaagtcgtaatccacataaattaaactcacacacaactgtgaggtcccgggttcgaacccatatcatgacgtccgaccttgcaattttgac 155  Q
    |||||||||||||| |||| ||||  ||||||||||||||||||||||||||||||| |||||||||||  ||||||||||||| ||||||||||| | |    
T  4464255 gtcttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccaggttcgaacccggatcatgacgtccggccttgcaatttcggc 4464156  T
Q  156 atttgccagttgagctagaacttctagact 185  Q
    ||||| ||||||| ||||||||||||||||    
T  4464155 atttgtcagttgaactagaacttctagact 4464126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 56 - 184
Target Start/End: Complemental strand, 33704344 - 33704216
Alignment:
Q  56 gtcttagatgaagtcgtaatccacataaattaaactcacacacaactgtgaggtcccgggttcgaacccatatcatgacgtccgaccttgcaattttgac 155  Q
    |||||| ||||||| |||||||||  ||| |||||||||||||||||||||||||||||||||||||||   |||||||||||| ||||||||||| | |    
T  33704344 gtcttaaatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgacgtccggccttgcaatttcggc 33704245  T
Q  156 atttgccagttgagctagaacttctagac 184  Q
    |||||||||||||||||| ||||||||||    
T  33704244 atttgccagttgagctaggacttctagac 33704216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 56 - 186
Target Start/End: Complemental strand, 28323060 - 28322930
Alignment:
Q  56 gtcttagatgaagtcgtaatccacataaattaaactcacacacaactgtgaggtcccgggttcgaacccatatcatgacgtccgaccttgcaattttgac 155  Q
    |||||||||||||| |||| ||||  ||| ||||||||||||||| |||||||||||||||||||||||  ||||||||||||| |||| |||||| | |    
T  28323060 gtcttagatgaagtggtaaaccactgaaactaaactcacacacaattgtgaggtcccgggttcgaacccggatcatgacgtccggccttacaatttcggc 28322961  T
Q  156 atttgccagttgagctagaacttctagactg 186  Q
    |||||||||||||||||| ||||||||||||    
T  28322960 atttgccagttgagctaggacttctagactg 28322930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 56 - 191
Target Start/End: Complemental strand, 21000820 - 21000685
Alignment:
Q  56 gtcttagatgaagtcgtaatccacataaattaaactcacacacaactgtgaggtcccgggttcgaacccatatcatgacgtccgaccttgcaattttgac 155  Q
    |||| ||||||||| |||| ||||  ||||||||| ||||||||| ||||||||||||||||||||||||  ||||||||| || ||||||||||| | |    
T  21000820 gtctcagatgaagtggtaaaccactgaaattaaacccacacacaattgtgaggtcccgggttcgaacccaggtcatgacgtacggccttgcaatttcggc 21000721  T
Q  156 atttgccagttgagctagaacttctagactgctaat 191  Q
    |||||||||||||||||| |||||||||||| ||||    
T  21000720 atttgccagttgagctaggacttctagactgttaat 21000685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 224 - 350
Target Start/End: Complemental strand, 34305072 - 34304946
Alignment:
Q  224 aagcaccacatgctcaagattttcttccagctattccaattgatggattaggtcagcatatgtcaccagttgagtaccgtactatccttcgatatcatct 323  Q
    ||||| ||||||||||||||||| ||| || ||| ||||||||||| ||| ||||||||||||||||||| |||||||||||||||||||||||   |||    
T  34305072 aagcagcacatgctcaagattttattctaggtatcccaattgatgggttatgtcagcatatgtcaccagtggagtaccgtactatccttcgatactgtct 34304973  T
Q  324 tatgattccactttttcctattgatga 350  Q
    |||||||||| | |||| |||||||||    
T  34304972 tatgattccattatttcatattgatga 34304946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 56 - 185
Target Start/End: Complemental strand, 21037418 - 21037290
Alignment:
Q  56 gtcttagatgaagtcgtaatccacataaattaaactcacacacaactgtgaggtcccgggttcgaacccatatcatgacgtccgaccttgcaattttgac 155  Q
    |||||||||||||| ||||| |||  ||| |||||||||||||||||||||||||| || |||||||||   |||  ||||||| |||||||||||   |    
T  21037418 gtcttagatgaagtggtaattcactgaaaataaactcacacacaactgtgaggtcc-ggattcgaacccgagtcacaacgtccggccttgcaatttcagc 21037320  T
Q  156 atttgccagttgagctagaacttctagact 185  Q
    ||||||||||||||||||||||||||||||    
T  21037319 atttgccagttgagctagaacttctagact 21037290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 56 - 184
Target Start/End: Complemental strand, 361139 - 361011
Alignment:
Q  56 gtcttagatgaagtcgtaatccacataaattaaactcacacacaactgtgaggtcccgggttcgaacccatatcatgacgtccgaccttgcaattttgac 155  Q
    ||||||||||||||  ||||||||  |||||||||||||| | ||||||||||| |||||||||||||| | ||| || || || ||||||||||||| |    
T  361139 gtcttagatgaagtgttaatccactgaaattaaactcacatataactgtgaggttccgggttcgaacccgtgtcacgatgttcggccttgcaattttggc 361040  T
Q  156 atttgccagttgagctagaacttctagac 184  Q
    ||||||||| |||||||  ||||||||||    
T  361039 atttgccagatgagctaagacttctagac 361011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 56 - 184
Target Start/End: Complemental strand, 2959277 - 2959149
Alignment:
Q  56 gtcttagatgaagtcgtaatccacataaattaaactcacacacaactgtgaggtcccgggttcgaacccatatcatgacgtccgaccttgcaattttgac 155  Q
    |||| ||||||||| ||| |||||  ||||||||||||||||||||||||||||| |||||||||||| |  ||| ||  |||| ||||||||||| | |    
T  2959277 gtctaagatgaagtggtattccacggaaattaaactcacacacaactgtgaggtctcgggttcgaacctaagtcacgatatccggccttgcaatttcggc 2959178  T
Q  156 atttgccagttgagctagaacttctagac 184  Q
    |||||| ||||||| ||| ||||||||||    
T  2959177 atttgctagttgagttaggacttctagac 2959149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 262 - 350
Target Start/End: Original strand, 4206166 - 4206254
Alignment:
Q  262 attgatggattaggtcagcatatgtcaccagttgagtaccgtactatccttcgatatcatcttatgattccactttttcctattgatga 350  Q
    |||||||| ||||||||||||||||||||||| |||||||||||||||||| ||| ||  |||| ||||||||| ||||||||||||||    
T  4206166 attgatgggttaggtcagcatatgtcaccagtggagtaccgtactatccttagatctcgccttacgattccactatttcctattgatga 4206254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 56 - 185
Target Start/End: Original strand, 24619079 - 24619208
Alignment:
Q  56 gtcttagatgaagtcgtaatccacataaattaaactcacacacaactgtgaggtcccgggttcgaacccatatcatgacgtccgaccttgcaattttgac 155  Q
    |||||||||||||| |||||| ||  ||||||||||||||||||| | ||||||| |||| |||||| |   ||| ||||| || |||| ||||||||||    
T  24619079 gtcttagatgaagtggtaatcgactgaaattaaactcacacacaattatgaggtcacgggatcgaactcgggtcacgacgttcggccttacaattttgac 24619178  T
Q  156 atttgccagttgagctagaacttctagact 185  Q
    ||||| |||||||| ||| |||||||||||    
T  24619179 atttgtcagttgagttaggacttctagact 24619208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 56 - 185
Target Start/End: Original strand, 35218640 - 35218757
Alignment:
Q  56 gtcttagatgaagtcgtaatccacataaattaaactcacacacaactgtgaggtcccgggttcgaacccatatcatgacgtccgaccttgcaattttgac 155  Q
    |||||||||||||| |||||||||  ||| ||||||||||||||||||||||||||||||            |||  ||||||| ||||||||||||| |    
T  35218640 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccggg------------tcacaacgtccggccttgcaattttggc 35218727  T
Q  156 atttgccagttgagctagaacttctagact 185  Q
    |||||||||||||||||| |||||||||||    
T  35218728 atttgccagttgagctaggacttctagact 35218757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 80 - 185
Target Start/End: Complemental strand, 11572112 - 11572007
Alignment:
Q  80 ataaattaaactcacacacaactgtgaggtcccgggttcgaacccatatcatgacgtccgaccttgcaattttgacatttgccagttgagctagaacttc 179  Q
    ||||| |||||||||||||||||||||||||||||||||||||||   ||| |||||| | |||| ||||||   ||||||  ||||||||||| |||||    
T  11572112 ataaaataaactcacacacaactgtgaggtcccgggttcgaacccgggtcacgacgtctggccttacaatttctgcatttgttagttgagctaggacttc 11572013  T
Q  180 tagact 185  Q
    ||||||    
T  11572012 tagact 11572007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 262 - 350
Target Start/End: Original strand, 45239 - 45327
Alignment:
Q  262 attgatggattaggtcagcatatgtcaccagttgagtaccgtactatccttcgatatcatcttatgattccactttttcctattgatga 350  Q
    |||||||| |||||||||||||||||| | || ||||| | |||||||||| ||||||| |||||||||||| | ||||||||||||||    
T  45239 attgatgggttaggtcagcatatgtcatctgtggagtatcatactatccttagatatcaccttatgattccaatatttcctattgatga 45327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 56 - 159
Target Start/End: Complemental strand, 16518549 - 16518448
Alignment:
Q  56 gtcttagatgaagtcgtaatccacataaattaaactcacacacaactgtgaggtcccgggttcgaacccatatcatgacgtccgaccttgcaattttgac 155  Q
    |||||||||||| | |||||||||  ||| ||||||||||||  |||||||| ||| |||||||||||||  |||  ||||||||||||||||||||| |    
T  16518549 gtcttagatgaaatggtaatccactgaaaataaactcacaca--actgtgagctcctgggttcgaacccaggtcacaacgtccgaccttgcaattttggc 16518452  T
Q  156 attt 159  Q
    ||||    
T  16518451 attt 16518448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 56 - 118
Target Start/End: Complemental strand, 19145598 - 19145536
Alignment:
Q  56 gtcttagatgaagtcgtaatccacataaattaaactcacacacaactgtgaggtcccgggttc 118  Q
    |||||||||||||| |||||||||  |||||||| |||||||||| |||||||||||||||||    
T  19145598 gtcttagatgaagtggtaatccactgaaattaaattcacacacaattgtgaggtcccgggttc 19145536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 56 - 121
Target Start/End: Original strand, 29009650 - 29009715
Alignment:
Q  56 gtcttagatgaagtcgtaatccacataaattaaactcacacacaactgtgaggtcccgggttcgaa 121  Q
    |||||||||||||| ||||| |||  ||| ||||||||||||||||||||||||||| ||||||||    
T  29009650 gtcttagatgaagtggtaattcactaaaaataaactcacacacaactgtgaggtcccaggttcgaa 29009715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 57 - 184
Target Start/End: Complemental strand, 12252150 - 12252023
Alignment:
Q  57 tcttagatgaagtcgtaatccacataaattaaactcacacacaactgtgaggtcccgggttcgaacccatatcatgacgtccgaccttgcaattttgaca 156  Q
    ||||| ||||||| |||| |||   ||||||||||||||||||||| ||||||| ||||||| |||||   ||| ||| ||||  |||||||| | |  |    
T  12252150 tcttaaatgaagtggtaagccattaaaattaaactcacacacaactatgaggtctcgggttcaaaccctggtcacgacatccggtcttgcaatctcggta 12252051  T
Q  157 tttgccagttgagctagaacttctagac 184  Q
    |||| |||||||||||| ||||||||||    
T  12252050 tttgtcagttgagctaggacttctagac 12252023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 223 - 350
Target Start/End: Original strand, 29337617 - 29337744
Alignment:
Q  223 caagcaccacatgctcaagattttcttccagctattccaattgatggattaggtcagcatatgtcaccagttgagtaccgtactatccttcgatatcatc 322  Q
    |||||| |||||||||| |||||||||| |||||| |  |||||||| |||||||||||||| || | |||  |||| | || ||||||| ||||||  |    
T  29337617 caagcagcacatgctcaggattttcttctagctatcctgattgatgggttaggtcagcatatttcgcaagtgaagtatcatattatccttagatatcgcc 29337716  T
Q  323 ttatgattccactttttcctattgatga 350  Q
    |||||||||| || ||| ||||| ||||    
T  29337717 ttatgattcctctattttctattaatga 29337744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 262 - 350
Target Start/End: Original strand, 26225242 - 26225330
Alignment:
Q  262 attgatggattaggtcagcatatgtcaccagttgagtaccgtactatccttcgatatcatcttatgattccactttttcctattgatga 350  Q
    |||||||  |||||||| |||||||||| ||| |||||||||||||||||| ||||||| |  ||||||||| | |||| |||| ||||    
T  26225242 attgatgagttaggtcaacatatgtcacaagtagagtaccgtactatccttagatatcaccccatgattccattatttcttattaatga 26225330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 94 - 185
Target Start/End: Complemental strand, 33255578 - 33255488
Alignment:
Q  94 cacacaactgtgaggtcccgggttcgaacccatatcatgacgtccgaccttgcaattttgacatttgccagttgagctagaacttctagact 185  Q
    ||||||||||||||||||| ||||||||| ||  |||  ||||||  |||| |||||||| |||||||||| |||||||| |||| ||||||    
T  33255578 cacacaactgtgaggtcccaggttcgaactcaggtca-aacgtccagccttacaattttggcatttgccagctgagctaggacttatagact 33255488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 86 - 185
Target Start/End: Complemental strand, 3057496 - 3057401
Alignment:
Q  86 taaactcacacacaactgtgaggtcccgggttcgaacccatatcatgacgtccgaccttgcaattttgacatttgccagttgagctagaacttctagact 185  Q
    |||||||||||||||||||||  ||| ||||||||||    ||||  ||||||  |||| |||||| |||||||  || |||||||||||||||||||||    
T  3057496 taaactcacacacaactgtgatatcctgggttcgaac----atcacaacgtccagccttacaatttcgacatttatcaattgagctagaacttctagact 3057401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 230 - 311
Target Start/End: Original strand, 8374836 - 8374917
Alignment:
Q  230 cacatgctcaagattttcttccagctattccaattgatggattaggtcagcatatgtcaccagttgagtaccgtactatcct 311  Q
    ||||||||||| ||||||||| |||||| |  |||||||| ||| | || |||||||||||| | ||||| |||||||||||    
T  8374836 cacatgctcaatattttcttctagctatccttattgatgggttaagccaacatatgtcaccaatagagtatcgtactatcct 8374917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 104 - 184
Target Start/End: Original strand, 10226540 - 10226620
Alignment:
Q  104 tgaggtcccgggttcgaacccatatcatgacgtccgaccttgcaattttgacatttgccagttgagctagaacttctagac 184  Q
    ||||||||||||||||||||| | ||| || ||||  | ||| ||||| |  |||||||||||||||||| ||||||||||    
T  10226540 tgaggtcccgggttcgaacccgtgtcacgaagtccagctttgtaatttcggaatttgccagttgagctaggacttctagac 10226620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 94 - 185
Target Start/End: Original strand, 4610863 - 4610953
Alignment:
Q  94 cacacaactgtgaggtcccgggttcgaacccatatcatgacgtccgaccttgcaattttgacatttgccagttgagctagaacttctagact 185  Q
    ||||||||||||||||||| |||||||||||   |||||| ||| | || ||||||||   ||||| | |||| ||||||||||||||||||    
T  4610863 cacacaactgtgaggtcccaggttcgaacccgggtcatgatgtctggcc-tgcaatttcagcattttctagttaagctagaacttctagact 4610953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 283 - 350
Target Start/End: Complemental strand, 12401842 - 12401775
Alignment:
Q  283 atgtcaccagttgagtaccgtactatccttcgatatcatcttatgattccactttttcctattgatga 350  Q
    ||||||||||| |||||||||| ||| ||| |||||  |||||||||| |||| ||| ||||||||||    
T  12401842 atgtcaccagtggagtaccgtattatgcttagatattgtcttatgattacactattttctattgatga 12401775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 85 - 124
Target Start/End: Original strand, 17590391 - 17590430
Alignment:
Q  85 ttaaactcacacacaactgtgaggtcccgggttcgaaccc 124  Q
    ||||||||||||||||||||||||  ||||||||||||||    
T  17590391 ttaaactcacacacaactgtgaggctccgggttcgaaccc 17590430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 87 - 169
Target Start/End: Original strand, 31963765 - 31963847
Alignment:
Q  87 aaactcacacacaactgtgaggtcccgggttcgaacccatatcatgacgtccgaccttgcaattttgacatttgccagttgag 169  Q
    ||||||||||| ||||  |||||  ||||||||||| ||||||| ||||||| || || ||||||  |||||| |||||||||    
T  31963765 aaactcacacataactacgaggtttcgggttcgaactcatatcacgacgtccaactttacaatttcaacatttaccagttgag 31963847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 295 - 353
Target Start/End: Complemental strand, 32116193 - 32116135
Alignment:
Q  295 gagtaccgtactatccttcgatatcatcttatgattccactttttcctattgatgatgt 353  Q
    ||||||| |||||||| | |||||  ||||||||||| ||| |||||||||||||||||    
T  32116193 gagtaccatactatccctagatattgtcttatgattcaactatttcctattgatgatgt 32116135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 127 - 172
Target Start/End: Original strand, 5598846 - 5598891
Alignment:
Q  127 atcatgacgtccgaccttgcaattttgacatttgccagttgagcta 172  Q
    |||| |||||| | |||||||||||||||||||| |||||||||||    
T  5598846 atcacgacgtctggccttgcaattttgacatttgtcagttgagcta 5598891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 99 - 180
Target Start/End: Original strand, 7197849 - 7197930
Alignment:
Q  99 aactgtgaggtcccgggttcgaacccatatcatgacgtccgaccttgcaattttgacatttgccagttgagctagaacttct 180  Q
    |||||| ||||||||||||||||| |   ||| ||||||| || || |||||||| |||||| || ||||||||| ||||||    
T  7197849 aactgtaaggtcccgggttcgaactcgggtcaagacgtccaactttacaattttggcatttgtcaattgagctaggacttct 7197930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 56 - 121
Target Start/End: Complemental strand, 22576309 - 22576244
Alignment:
Q  56 gtcttagatgaagtcgtaatccacataaattaaactcacacacaactgtgaggtcccgggttcgaa 121  Q
    |||||||| ||||| ||||| ||   |||| ||||||||||| ||||||||||| |||||||||||    
T  22576309 gtcttagaagaagtggtaatacaatgaaatcaaactcacacataactgtgaggttccgggttcgaa 22576244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 86 - 180
Target Start/End: Complemental strand, 735543 - 735448
Alignment:
Q  86 taaactcacacacaactgtgaggtcccggg-ttcgaacccatatcatgacgtccgaccttgcaattttgacattt-gccagttgagctagaacttct 180  Q
    ||||||||||||||| || ||||| ||||| |||||||||  |||||| | |||| |||  |||||| | ||||| |||||||||||||||||||||    
T  735543 taaactcacacacaagtg-gaggtaccggggttcgaaccccgatcatggcatccggcctaacaatttcggcattttgccagttgagctagaacttct 735448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 113 - 180
Target Start/End: Complemental strand, 21513143 - 21513075
Alignment:
Q  113 gggttcgaacccatatcatgacgtccgaccttgcaattttgacattt-gccagttgagctagaacttct 180  Q
    ||||||||||||  |||||||| |||| |||  |||||| ||||||| |||||||||||||| ||||||    
T  21513143 gggttcgaaccccaatcatgacatccggcctaacaatttcgacattttgccagttgagctaggacttct 21513075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 85; Significance: 2e-40; HSPs: 56)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 56 - 184
Target Start/End: Original strand, 10639606 - 10639734
Alignment:
Q  56 gtcttagatgaagtcgtaatccacataaattaaactcacacacaactgtgaggtcccgggttcgaacccatatcatgacgtccgaccttgcaattttgac 155  Q
    |||||||||||||| |||||||||  ||| |||||||||||||||||||||||||||||||||||||||   |||||||||||| ||||||||||| | |    
T  10639606 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgacgtccggccttgcaatttcggc 10639705  T
Q  156 atttgccagttgagctagaacttctagac 184  Q
    |||||||||||||||||| ||||||||||    
T  10639706 atttgccagttgagctaggacttctagac 10639734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 56 - 184
Target Start/End: Original strand, 33083554 - 33083682
Alignment:
Q  56 gtcttagatgaagtcgtaatccacataaattaaactcacacacaactgtgaggtcccgggttcgaacccatatcatgacgtccgaccttgcaattttgac 155  Q
    |||||||||||||| |||||||||  ||| |||||||||||||||||||||||||||||||||||||||   |||||||||||| ||||||||||| | |    
T  33083554 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgacgtccggccttgcaatttcggc 33083653  T
Q  156 atttgccagttgagctagaacttctagac 184  Q
    |||||||||||||||||| ||||||||||    
T  33083654 atttgccagttgagctaggacttctagac 33083682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 56 - 184
Target Start/End: Complemental strand, 11459843 - 11459715
Alignment:
Q  56 gtcttagatgaagtcgtaatccacataaattaaactcacacacaactgtgaggtcccgggttcgaacccatatcatgacgtccgaccttgcaattttgac 155  Q
    |||||||||||||| ||||||||   ||| ||||| |||||||||||||||||||||||||||||||||   |||||||||||||||||||||||| | |    
T  11459843 gtcttagatgaagtggtaatccattgaaaataaacacacacacaactgtgaggtcccgggttcgaacccgggtcatgacgtccgaccttgcaatttcggc 11459744  T
Q  156 atttgccagttgagctagaacttctagac 184  Q
    |||||||||||||||||| ||||||||||    
T  11459743 atttgccagttgagctaggacttctagac 11459715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 223 - 350
Target Start/End: Original strand, 4412597 - 4412724
Alignment:
Q  223 caagcaccacatgctcaagattttcttccagctattccaattgatggattaggtcagcatatgtcaccagttgagtaccgtactatccttcgatatcatc 322  Q
    |||||| |||||||||| |||||||||| |||||| || |||||||  ||||||||||||||||||||||| ||||| |||||||||||| |||||| ||    
T  4412597 caagcaacacatgctcaggattttcttctagctatcccgattgatgagttaggtcagcatatgtcaccagtggagtatcgtactatccttagatatcgtc 4412696  T
Q  323 ttatgattccactttttcctattgatga 350  Q
    ||||||||||||| ||||||||||||||    
T  4412697 ttatgattccactatttcctattgatga 4412724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 223 - 350
Target Start/End: Original strand, 41867439 - 41867566
Alignment:
Q  223 caagcaccacatgctcaagattttcttccagctattccaattgatggattaggtcagcatatgtcaccagttgagtaccgtactatccttcgatatcatc 322  Q
    |||||| ||||||||||  ||||||||| |||||| || |||||||| ||||||||||||||||||||||| ||||| |||||||||||| |||||| ||    
T  41867439 caagcagcacatgctcagaattttcttctagctatcccgattgatgggttaggtcagcatatgtcaccagtggagtatcgtactatccttagatatcgtc 41867538  T
Q  323 ttatgattccactttttcctattgatga 350  Q
    ||||||||||||| ||||||||||||||    
T  41867539 ttatgattccactatttcctattgatga 41867566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 56 - 186
Target Start/End: Complemental strand, 19048882 - 19048752
Alignment:
Q  56 gtcttagatgaagtcgtaatccacataaattaaactcacacacaactgtgaggtcccgggttcgaacccatatcatgacgtccgaccttgcaattttgac 155  Q
    |||||||||||||| |||| ||||  ||| ||||||||||||||| |||||||||||||||||||||||  ||||||||||||| |||| |||||| | |    
T  19048882 gtcttagatgaagtggtaaaccactgaaactaaactcacacacaattgtgaggtcccgggttcgaacccggatcatgacgtccggccttacaatttcggc 19048783  T
Q  156 atttgccagttgagctagaacttctagactg 186  Q
    |||||||||||||||||| ||||||||||||    
T  19048782 atttgccagttgagctaggacttctagactg 19048752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 56 - 186
Target Start/End: Complemental strand, 23839987 - 23839857
Alignment:
Q  56 gtcttagatgaagtcgtaatccacataaattaaactcacacacaactgtgaggtcccgggttcgaacccatatcatgacgtccgaccttgcaattttgac 155  Q
    |||||||||||||| |||||||||  ||| ||||||||||||||||||||||||||| ||||||||||||  |||  ||||||| ||||||||||||| |    
T  23839987 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccaggttcgaacccaggtcacaacgtccggccttgcaattttggc 23839888  T
Q  156 atttgccagttgagctagaacttctagactg 186  Q
    |||||||||||||| ||| ||||||||||||    
T  23839887 atttgccagttgagttaggacttctagactg 23839857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 223 - 350
Target Start/End: Original strand, 9684946 - 9685073
Alignment:
Q  223 caagcaccacatgctcaagattttcttccagctattccaattgatggattaggtcagcatatgtcaccagttgagtaccgtactatccttcgatatcatc 322  Q
    |||||| ||||| ||||||||||||||| |||||| || |||||||| ||||||||||||||||||||||| ||||| |||||||||||| ||||||  |    
T  9684946 caagcagcacatactcaagattttcttctagctatccctattgatgggttaggtcagcatatgtcaccagtggagtatcgtactatccttagatatcgcc 9685045  T
Q  323 ttatgattccactttttcctattgatga 350  Q
    ||| ||||||||| ||||||||||||||    
T  9685046 ttacgattccactatttcctattgatga 9685073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 223 - 350
Target Start/End: Complemental strand, 17345214 - 17345087
Alignment:
Q  223 caagcaccacatgctcaagattttcttccagctattccaattgatggattaggtcagcatatgtcaccagttgagtaccgtactatccttcgatatcatc 322  Q
    |||| ||||||||||||||||||||||| |||||| ||||||||||| ||||||| ||||||||||| ||| ||||| |||||||||||| ||||||  |    
T  17345214 caagaaccacatgctcaagattttcttctagctatcccaattgatgggttaggtcggcatatgtcactagtggagtatcgtactatccttagatatcgcc 17345115  T
Q  323 ttatgattccactttttcctattgatga 350  Q
    |||||| |||||| ||||||||||||||    
T  17345114 ttatgaatccactatttcctattgatga 17345087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 223 - 350
Target Start/End: Complemental strand, 44686993 - 44686866
Alignment:
Q  223 caagcaccacatgctcaagattttcttccagctattccaattgatggattaggtcagcatatgtcaccagttgagtaccgtactatccttcgatatcatc 322  Q
    |||||| |||||||| |||||||||||| ||||||  |||||||||| ||||||||| ||||||||||| | ||||| ||||||||||||||||||| ||    
T  44686993 caagcagcacatgcttaagattttcttctagctatctcaattgatgggttaggtcagtatatgtcaccaatggagtatcgtactatccttcgatatcgtc 44686894  T
Q  323 ttatgattccactttttcctattgatga 350  Q
    ||||||||||||| | ||||||||||||    
T  44686893 ttatgattccactatgtcctattgatga 44686866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 56 - 180
Target Start/End: Original strand, 11816550 - 11816675
Alignment:
Q  56 gtcttagatgaagtcgtaatccacataaattaaa-ctcacacacaactgtgaggtcccgggttcgaacccatatcatgacgtccgaccttgcaattttga 154  Q
    |||||||||||||| |||||||||  |||||||| |||||| ||||||||||||| |||||||||||||||  ||| |||||||||||||||||||| |     
T  11816550 gtcttagatgaagtggtaatccactgaaattaaaactcacatacaactgtgaggttccgggttcgaacccaggtcacgacgtccgaccttgcaatttcgg 11816649  T
Q  155 catttgccagttgagctagaacttct 180  Q
    ||||||||||||||||||| ||||||    
T  11816650 catttgccagttgagctaggacttct 11816675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 56 - 184
Target Start/End: Complemental strand, 26605752 - 26605624
Alignment:
Q  56 gtcttagatgaagtcgtaatccacataaattaaactcacacacaactgtgaggtcccgggttcgaacccatatcatgacgtccgaccttgcaattttgac 155  Q
    |||||||||||||| |||||||||  ||| |||| ||||||||||||||||||||||||||||||||||   |||  ||||||| ||||||||||| | |    
T  26605752 gtcttagatgaagtggtaatccactgaaaataaattcacacacaactgtgaggtcccgggttcgaacccgggtcacaacgtccggccttgcaatttcggc 26605653  T
Q  156 atttgccagttgagctagaacttctagac 184  Q
    |||||||||||||||||| ||||||||||    
T  26605652 atttgccagttgagctaggacttctagac 26605624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 230 - 350
Target Start/End: Complemental strand, 28225568 - 28225449
Alignment:
Q  230 cacatgctcaagattttcttccagctattccaattgatggattaggtcagcatatgtcaccagttgagtaccgtactatccttcgatatcatcttatgat 329  Q
    ||||||||||||||||||||| |||||| ||||||||||| |||| |||||||||||||||||  |||||||||||||||| ||||||||||||||||||    
T  28225568 cacatgctcaagattttcttctagctat-ccaattgatgggttagatcagcatatgtcaccagcggagtaccgtactatccgtcgatatcatcttatgat 28225470  T
Q  330 tccactttttcctattgatga 350  Q
    |||| | ||| | ||||||||    
T  28225469 tccattattttccattgatga 28225449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 56 - 186
Target Start/End: Original strand, 39831444 - 39831573
Alignment:
Q  56 gtcttagatgaagtcgtaatccacataaattaaactcacacacaactgtgaggtcccgggttcgaacccatatcatgacgtccgaccttgcaattttgac 155  Q
    |||||||||||||| |||| ||||  ||||||||||||||||||| ||||||||||||| |||||||||  ||||||||||||| ||||||||||| |      
T  39831444 gtcttagatgaagtggtaaaccactgaaattaaactcacacacaattgtgaggtcccgg-ttcgaacccggatcatgacgtccggccttgcaatttcggt 39831542  T
Q  156 atttgccagttgagctagaacttctagactg 186  Q
    |||||||||||||||||| |||| |||||||    
T  39831543 atttgccagttgagctaggacttatagactg 39831573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 56 - 184
Target Start/End: Complemental strand, 19537435 - 19537307
Alignment:
Q  56 gtcttagatgaagtcgtaatccacataaattaaactcacacacaactgtgaggtcccgggttcgaacccatatcatgacgtccgaccttgcaattttgac 155  Q
    |||||||||||||| |||||||||  ||| ||||| |||||||||||||||||| ||||||||||||||  ||||  ||||||| ||||||||||| | |    
T  19537435 gtcttagatgaagtggtaatccactgaaaataaacacacacacaactgtgaggttccgggttcgaacccggatcacaacgtccggccttgcaatttcggc 19537336  T
Q  156 atttgccagttgagctagaacttctagac 184  Q
    ||||||||||||| |||| ||||||||||    
T  19537335 atttgccagttgaactaggacttctagac 19537307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 56 - 172
Target Start/End: Original strand, 37197610 - 37197726
Alignment:
Q  56 gtcttagatgaagtcgtaatccacataaattaaactcacacacaactgtgaggtcccgggttcgaacccatatcatgacgtccgaccttgcaattttgac 155  Q
    |||||||||||||| |||||||||  ||| |||||||||||||||||||||||||||||||||||||||   ||| |||||||  ||||||||||| | |    
T  37197610 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccgggtcacgacgtccagccttgcaatttcggc 37197709  T
Q  156 atttgccagttgagcta 172  Q
    |||||||||||||||||    
T  37197710 atttgccagttgagcta 37197726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 56 - 184
Target Start/End: Original strand, 39535534 - 39535662
Alignment:
Q  56 gtcttagatgaagtcgtaatccacataaattaaactcacacacaactgtgaggtcccgggttcgaacccatatcatgacgtccgaccttgcaattttgac 155  Q
    |||||||||||||| ||||||| |  |||||||||||||| | ||||||||||||||||||||||||||   ||| |||||||| ||||||||||| |||    
T  39535534 gtcttagatgaagtggtaatccgctcaaattaaactcacataaaactgtgaggtcccgggttcgaacccgggtcacgacgtccggccttgcaatttcgac 39535633  T
Q  156 atttgccagttgagctagaacttctagac 184  Q
    |||||| ||||||| ||| ||||||||||    
T  39535634 atttgctagttgagttaggacttctagac 39535662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 56 - 184
Target Start/End: Original strand, 45125165 - 45125293
Alignment:
Q  56 gtcttagatgaagtcgtaatccacataaattaaactcacacacaactgtgaggtcccgggttcgaacccatatcatgacgtccgaccttgcaattttgac 155  Q
    |||||||||||||| |||||||||  ||| |||||||||||||||||||||||| ||| |||||||||||  |||  ||||||| |||| |||||| | |    
T  45125165 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggttccgagttcgaacccaagtcacaacgtccggccttacaatttcggc 45125264  T
Q  156 atttgccagttgagctagaacttctagac 184  Q
    |||||||||||||||||| ||||||||||    
T  45125265 atttgccagttgagctaggacttctagac 45125293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 56 - 184
Target Start/End: Complemental strand, 34460497 - 34460369
Alignment:
Q  56 gtcttagatgaagtcgtaatccacataaattaaactcacacacaactgtgaggtcccgggttcgaacccatatcatgacgtccgaccttgcaattttgac 155  Q
    |||||||||||||| |||||||||  ||| |||||||||||||||||||||||| | ||||||||||||   |||  ||||||| ||||||||||| | |    
T  34460497 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggttctgggttcgaacccgggtcacaacgtccggccttgcaatttcggc 34460398  T
Q  156 atttgccagttgagctagaacttctagac 184  Q
    ||||| |||||||||||| ||||||||||    
T  34460397 atttgtcagttgagctaggacttctagac 34460369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 223 - 350
Target Start/End: Original strand, 20142271 - 20142398
Alignment:
Q  223 caagcaccacatgctcaagattttcttccagctattccaattgatggattaggtcagcatatgtcaccagttgagtaccgtactatccttcgatatcatc 322  Q
    |||||| |||||||||| |||||||||| |||||| || |||||||| ||| |||||||||||||| |||| |||||  ||||||||||| ||||||  |    
T  20142271 caagcagcacatgctcaggattttcttctagctatcccgattgatgggttaagtcagcatatgtcaacagtggagtattgtactatccttagatatcgcc 20142370  T
Q  323 ttatgattccactttttcctattgatga 350  Q
    ||||||||||||| ||||||| ||||||    
T  20142371 ttatgattccactatttcctaatgatga 20142398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 59 - 184
Target Start/End: Complemental strand, 11708803 - 11708678
Alignment:
Q  59 ttagatgaagtcgtaatccacataaattaaactcacacacaactgtgaggtcccgggttcgaacccatatcatgacgtccgaccttgcaattttgacatt 158  Q
    ||||||||||| |||||||||  ||| ||||| |||||||||||||||||||| ||||||||||||   |||  ||||||| |||| |||||| | ||||    
T  11708803 ttagatgaagtggtaatccactgaaaataaacccacacacaactgtgaggtcctgggttcgaacccgggtcacaacgtccggccttacaatttcggcatt 11708704  T
Q  159 tgccagttgagctagaacttctagac 184  Q
    ||||||||||||||| ||||||||||    
T  11708703 tgccagttgagctaggacttctagac 11708678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 56 - 184
Target Start/End: Complemental strand, 4851448 - 4851320
Alignment:
Q  56 gtcttagatgaagtcgtaatccacataaattaaactcacacacaactgtgaggtcccgggttcgaacccatatcatgacgtccgaccttgcaattttgac 155  Q
    ||||| |||||||| |||||||||  |||||||||||||||||||||||||||||||||||| ||||||  |||| |||||||| | || |||||| | |    
T  4851448 gtcttggatgaagtggtaatccactaaaattaaactcacacacaactgtgaggtcccgggtttgaacccggatcacgacgtccggctttacaatttcggc 4851349  T
Q  156 atttgccagttgagctagaacttctagac 184  Q
    | ||| |||||||||||| ||||| ||||    
T  4851348 aattgacagttgagctaggacttcaagac 4851320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 56 - 184
Target Start/End: Original strand, 29659218 - 29659346
Alignment:
Q  56 gtcttagatgaagtcgtaatccacataaattaaactcacacacaactgtgaggtcccgggttcgaacccatatcatgacgtccgaccttgcaattttgac 155  Q
    |||||||||||||| |||||||||  ||| |||||||||||||||||||||||||  ||||||||||||   |||  | || || |||| |||||||| |    
T  29659218 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcatgggttcgaacccgggtcacaatgttcggccttacaattttggc 29659317  T
Q  156 atttgccagttgagctagaacttctagac 184  Q
    |||||||||||||||||| ||||||||||    
T  29659318 atttgccagttgagctaggacttctagac 29659346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 223 - 319
Target Start/End: Original strand, 18744549 - 18744645
Alignment:
Q  223 caagcaccacatgctcaagattttcttccagctattccaattgatggattaggtcagcatatgtcaccagttgagtaccgtactatccttcgatatc 319  Q
    ||||||||| |||||||||| ||||||| |||||| || |||||||| |||||| |||||||||||||||| ||||| |||||||||||| ||||||    
T  18744549 caagcaccaaatgctcaagaatttcttctagctatcccgattgatgggttaggttagcatatgtcaccagtggagtatcgtactatccttagatatc 18744645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 56 - 184
Target Start/End: Complemental strand, 42578296 - 42578180
Alignment:
Q  56 gtcttagatgaagtcgtaatccacataaattaaactcacacacaactgtgaggtcccgggttcgaacccatatcatgacgtccgaccttgcaattttgac 155  Q
    |||||||||||||| |||||||||  ||| |||||||||||||||||||||||| ||||||            ||||||||||||||||||||||| | |    
T  42578296 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtaccgggt------------catgacgtccgaccttgcaatttcggc 42578209  T
Q  156 atttgccagttgagctagaacttctagac 184  Q
    |||||||||||||||||| ||||||||||    
T  42578208 atttgccagttgagctaggacttctagac 42578180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 59 - 181
Target Start/End: Complemental strand, 4801001 - 4800879
Alignment:
Q  59 ttagatgaagtcgtaatccacataaattaaactcacacacaactgtgaggtcccgggttcgaacccatatcatgacgtccgaccttgcaattttgacatt 158  Q
    ||||||||||| ||||| |||   ||||||||||||||| ||| | ||||| |||||||||||| ||  ||| |||||||  ||||||||||| ||||||    
T  4801001 ttagatgaagtggtaattcactggaattaaactcacacataaccgcgaggttccgggttcgaactcaggtcacgacgtccagccttgcaatttcgacatt 4800902  T
Q  159 tgccagttgagctagaacttcta 181  Q
    |||| ||||||||||||||||||    
T  4800901 tgccggttgagctagaacttcta 4800879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 56 - 184
Target Start/End: Original strand, 7275886 - 7276015
Alignment:
Q  56 gtcttagatgaagtcgtaatccacataaattaaactcacacacaactgtgaggtcccgggttcgaacccatatcatgacgtccgaccttgcaattttgac 155  Q
    |||||||||||||| ||||||||   |||||||| | ||||||||||||||||||||||||||||||||    || ||| |||||||||||||||| | |    
T  7275886 gtcttagatgaagtggtaatccattaaaattaaatttacacacaactgtgaggtcccgggttcgaacccgggccacgacatccgaccttgcaatttcggc 7275985  T
Q  156 a-tttgccagttgagctagaacttctagac 184  Q
    | |||| |||||||| ||| ||||||||||    
T  7275986 attttgtcagttgagttaggacttctagac 7276015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 56 - 184
Target Start/End: Complemental strand, 34234656 - 34234530
Alignment:
Q  56 gtcttagatgaagtcgtaatccacataaattaaactcacacacaactgtgaggtcccgggttcgaacccatatcatgacgtccgaccttgcaattttgac 155  Q
    |||||||||||||| || ||| ||  ||||||||||||||||  ||| ||||||| ||||||| ||| || ||||  || |||||||||||||||| | |    
T  34234656 gtcttagatgaagtggtgatctactgaaattaaactcacaca--actatgaggtctcgggttcaaactcagatcacaacatccgaccttgcaatttcggc 34234559  T
Q  156 atttgccagttgagctagaacttctagac 184  Q
    |||||||||||||||||| ||||||||||    
T  34234558 atttgccagttgagctaggacttctagac 34234530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 59 - 180
Target Start/End: Complemental strand, 43684194 - 43684073
Alignment:
Q  59 ttagatgaagtcgtaatccacataaattaaactcacacacaactgtgaggtcccgggttcgaacccatatcatgacgtccgaccttgcaattttgacatt 158  Q
    ||||||||||| ||||||||   ||| |||||||||||| || |||| |||||||||||||||||||| |||||  ||||| ||||||||||| | ||||    
T  43684194 ttagatgaagtggtaatccagtgaaaataaactcacacataattgtggggtcccgggttcgaacccatgtcatggtgtccggccttgcaatttcggcatt 43684095  T
Q  159 tgccagttgagctagaacttct 180  Q
    || |||||||| ||| ||||||    
T  43684094 tgtcagttgagataggacttct 43684073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 56 - 184
Target Start/End: Complemental strand, 19816348 - 19816220
Alignment:
Q  56 gtcttagatgaagtcgtaatccacataaattaaactcacacacaactgtgaggtcccgggttcgaacccatatcatgacgtccgaccttgcaattttgac 155  Q
    |||||||||||||| |||||| ||  ||| |||||||| ||||||||| ||||| |||||||| |||||   |||  ||||||| ||||||||||| |      
T  19816348 gtcttagatgaagttgtaatctactgaaaataaactcatacacaactgcgaggttccgggttcaaacccgggtcacaacgtccggccttgcaatttcggt 19816249  T
Q  156 atttgccagttgagctagaacttctagac 184  Q
    |||||||||||||||||| ||||||||||    
T  19816248 atttgccagttgagctaggacttctagac 19816220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 56 - 184
Target Start/End: Original strand, 27137918 - 27138045
Alignment:
Q  56 gtcttagatgaagtcgtaatccacataaattaaactcacacacaactgtgaggtcccgggttcgaacccatatcatgacgtccgaccttgcaattttgac 155  Q
    |||||||||||||| |||||||||  |||||||||||||| | |||||| ||||||||||||||||||||  ||| || || || |||| ||||||   |    
T  27137918 gtcttagatgaagtggtaatccactgaaattaaactcacataaaactgtaaggtcccgggttcgaacccaggtcacgatgttcggcctt-caatttcagc 27138016  T
Q  156 atttgccagttgagctagaacttctagac 184  Q
    ||||| |||||||||||| ||||||||||    
T  27138017 atttgtcagttgagctaggacttctagac 27138045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 233 - 344
Target Start/End: Original strand, 19161367 - 19161478
Alignment:
Q  233 atgctcaagattttcttccagctattccaattgatggattaggtcagcatatgtcaccagttgagtaccgtactatccttcgatatcatcttatgattcc 332  Q
    ||||||| |||||||||| |||||| |  |||||| | |||||||||||||||||| |||| ||||| ||||||||| || |||||| |||||||||| |    
T  19161367 atgctcaggattttcttctagctatcctgattgataggttaggtcagcatatgtcatcagtggagtatcgtactatcattagatatcgtcttatgattgc 19161466  T
Q  333 actttttcctat 344  Q
    ||| ||||||||    
T  19161467 actatttcctat 19161478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 56 - 178
Target Start/End: Complemental strand, 21312331 - 21312211
Alignment:
Q  56 gtcttagatgaagtcgtaatccacataaattaaactcacacacaactgtgaggtcccgggttcgaacccatatcatgacgtccgaccttgcaattttgac 155  Q
    |||||||||||||| ||||| |||  ||| ||||||||||||  | ||||||||||| ||||||| |||| ||||  |||||||  ||| ||||||||||    
T  21312331 gtcttagatgaagtggtaattcactaaaaataaactcacaca--attgtgaggtcccaggttcgatcccagatcacaacgtccggtcttacaattttgac 21312234  T
Q  156 atttgccagttgagctagaactt 178  Q
    |||||||| ||||||||||||||    
T  21312233 atttgccaattgagctagaactt 21312211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 58 - 184
Target Start/End: Complemental strand, 15782715 - 15782590
Alignment:
Q  58 cttagatgaagtcgtaatccacataaattaaactcacacacaactgtgaggtcccgggttcgaacccatatcatgacgtccgaccttgcaattttgacat 157  Q
    |||||||||||| |||| ||||  ||||||||||| |||||| |||| ||||| |||||||||||||   ||||||||||||||||| |||||| | |||    
T  15782715 cttagatgaagtggtaaaccactgaaattaaactcccacaca-ctgtaaggtctcgggttcgaacccgggtcatgacgtccgaccttacaatttcggcat 15782617  T
Q  158 ttgccagttgagctagaacttctagac 184  Q
    ||| || ||||||||| |||| |||||    
T  15782616 ttgtcaattgagctaggacttttagac 15782590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 87 - 185
Target Start/End: Original strand, 45201903 - 45202001
Alignment:
Q  87 aaactcacacacaactgtgaggtcccgggttcgaacccatatcatgacgtccgaccttgcaattttgacatttgccagttgagctagaacttctagact 185  Q
    ||||||||||||||||||||||| ||| |||||||| |  |||| |||| |||||||| |||||| ||||||||||| ||||| ||| |||||||||||    
T  45201903 aaactcacacacaactgtgaggttccgagttcgaactcggatcacgacgaccgaccttacaatttcgacatttgccaattgagttaggacttctagact 45202001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 56 - 181
Target Start/End: Original strand, 38440197 - 38440322
Alignment:
Q  56 gtcttagatgaagtcgtaatccacataaattaaactcacacacaactgtgaggtcccgggttcgaacccatatcatgacgtccgaccttgcaattttgac 155  Q
    |||||||||||||| |||||||||  |||||||||||||||| | ||  |||||| | |||||| | ||   ||| |||||||| ||||||||||| | |    
T  38440197 gtcttagatgaagtggtaatccactaaaattaaactcacacatagctaggaggtctcaggttcggatccgggtcacgacgtccggccttgcaatttcggc 38440296  T
Q  156 atttgccagttgagctagaacttcta 181  Q
    ||||| |||||||||| |||||||||    
T  38440297 atttgtcagttgagctggaacttcta 38440322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 56 - 180
Target Start/End: Complemental strand, 42025799 - 42025674
Alignment:
Q  56 gtcttagatgaagtcgtaatccacataaattaa-actcacacacaactgtgaggtcccgggttcgaacccatatcatgacgtccgaccttgcaattttga 154  Q
    |||||||||||||| ||| |||||  ||||||| |||||||||||| |||||||| | |||||||||| ||  ||| ||| |||| ||||  ||||| ||    
T  42025799 gtcttagatgaagtggtagtccactgaaattaagactcacacacaattgtgaggttctgggttcgaactcaggtcacgacatccggccttaaaatttcga 42025700  T
Q  155 catttgccagttgagctagaacttct 180  Q
    |||||| |||||||||||| ||||||    
T  42025699 catttgtcagttgagctaggacttct 42025674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 82 - 185
Target Start/End: Original strand, 9815824 - 9815925
Alignment:
Q  82 aaattaaactcacacacaactgtgaggtcccgggttcgaacccatatcatgacgtccgaccttgcaattttgacatttgccagttgagctagaacttcta 181  Q
    ||||||||||||||  |||||||||| | || ||||| |||| | || ||||| || |||||| ||||||||| ||||| ||||||||||||||||||||    
T  9815824 aaattaaactcaca--caactgtgagattccaggttcaaacctaaattatgacatctgaccttacaattttgatatttgtcagttgagctagaacttcta 9815921  T
Q  182 gact 185  Q
    ||||    
T  9815922 gact 9815925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 71 - 182
Target Start/End: Original strand, 6055020 - 6055131
Alignment:
Q  71 gtaatccacataaattaaactcacacacaactgtgaggtcccgggttcgaacccatatcatgacgtccgaccttgcaattttgacatttgccagttgagc 170  Q
    |||||||||  |||||||||||||||||| || |||||||| | ||||||| ||  || | ||||| |||||||||||||||| |||||| || ||||||    
T  6055020 gtaatccactaaaattaaactcacacacagctatgaggtcctgagttcgaatccgaattacgacgttcgaccttgcaattttggcatttgtcaattgagc 6055119  T
Q  171 tagaacttctag 182  Q
    ||| || |||||    
T  6055120 taggacatctag 6055131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 86 - 181
Target Start/End: Complemental strand, 16654461 - 16654366
Alignment:
Q  86 taaactcacacacaactgtgaggtcccgggttcgaacccatatcatgacgtccgaccttgcaattttgacatttgccagttgagctagaacttcta 181  Q
    |||||||||||||||||||||||| |||||||||||| |  |||| | |||||| ||||||||||| | |||||  |||||||| ||| |||||||    
T  16654461 taaactcacacacaactgtgaggttccgggttcgaactcggatcacggcgtccggccttgcaatttcggcatttatcagttgagttaggacttcta 16654366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 59 - 185
Target Start/End: Complemental strand, 7349223 - 7349097
Alignment:
Q  59 ttagatgaagtcgtaatccacataaattaaactcacacacaactgtgaggtcccgggttcgaacccatatcatgacgtccgaccttgcaattttgacatt 158  Q
    ||||||||||| || ||||||  |||||||||||||||| |  ||||||||| ||| ||||||| |  |||| |||||||| ||||||||| |   ||||    
T  7349223 ttagatgaagtggtgatccactaaaattaaactcacacatagttgtgaggtctcggattcgaactcggatcacgacgtccggccttgcaatatcagcatt 7349124  T
Q  159 tgccagttgagctagaacttctagact 185  Q
    ||||||||||| | | |||||||||||    
T  7349123 tgccagttgagattggacttctagact 7349097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 56 - 125
Target Start/End: Complemental strand, 33001830 - 33001761
Alignment:
Q  56 gtcttagatgaagtcgtaatccacataaattaaactcacacacaactgtgaggtcccgggttcgaaccca 125  Q
    |||||||||||| | |||||||||  |||||||||||||| | ||||||||||||| | |||||||||||    
T  33001830 gtcttagatgaaatggtaatccactgaaattaaactcacatataactgtgaggtcctgtgttcgaaccca 33001761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 56 - 184
Target Start/End: Original strand, 44181887 - 44182015
Alignment:
Q  56 gtcttagatgaagtcgtaatccacataaattaaactcacacacaactgtgaggtcccgggttcgaacccatatcatgacgtccgaccttgcaattttgac 155  Q
    ||||||||| ||||  ||||||||  ||| |||||||||||||||||||||| |||||| |||||| ||| ||||  || | ||||||| ||||||   |    
T  44181887 gtcttagattaagtgataatccactgaaaataaactcacacacaactgtgagatcccggattcgaatccaaatcacaacattcgaccttacaatttcagc 44181986  T
Q  156 atttgccagttgagctagaacttctagac 184  Q
    ||||| ||||| | ||| ||||| |||||    
T  44181987 atttgtcagttaaactaaaacttttagac 44182015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 58 - 181
Target Start/End: Original strand, 20497592 - 20497715
Alignment:
Q  58 cttagatgaagtcgtaatccacataaattaaactcacacacaactgtgaggtcccgggttcgaacccatatcatgacgtccgaccttgcaattttgacat 157  Q
    |||||||||||| |||| ||||  |||| ||||||||| |||| |||||||| ||||||| |||||   |||| ||||| | |||||  ||||| |||||    
T  20497592 cttagatgaagtggtaaaccactgaaataaaactcacatacaattgtgaggttccgggtttgaacctgaatcacgacgttcaaccttataatttcgacat 20497691  T
Q  158 ttgccagttgagctagaacttcta 181  Q
    || | ||||||| ||| |||||||    
T  20497692 tttctagttgagttaggacttcta 20497715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 105 - 180
Target Start/End: Original strand, 25501832 - 25501907
Alignment:
Q  105 gaggtcccgggttcgaacccatatcatgacgtccgaccttgcaattttgacatttgccagttgagctagaacttct 180  Q
    ||||| ||||||||||||| |  ||| |||||||| |||||||||||   ||||||||||||||||||| ||||||    
T  25501832 gaggttccgggttcgaacctaggtcacgacgtccggccttgcaatttcagcatttgccagttgagctaggacttct 25501907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 59 - 181
Target Start/End: Complemental strand, 34093363 - 34093240
Alignment:
Q  59 ttagatgaagtcgtaa-tccacataaattaaactcacacacaactgtgaggtcccgggttcgaacccatatcatgacgtccgaccttgcaattttgacat 157  Q
    ||||||||||| |||| |||||  |||||||||||| ||| |  ||||| ||| |||||| ||| |   ||||  ||||||||||||  |||||||||||    
T  34093363 ttagatgaagtggtaagtccactgaaattaaactcatacatatttgtgatgtctcgggtttgaatctggatcacaacgtccgaccttaaaattttgacat 34093264  T
Q  158 ttgccagttgagctagaacttcta 181  Q
    ||| ||||||||||| ||||||||    
T  34093263 ttgtcagttgagctataacttcta 34093240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 82 - 185
Target Start/End: Original strand, 40786235 - 40786338
Alignment:
Q  82 aaattaaactcacacacaactgtgaggtcccgggttcgaacccatatcatgacgtccgaccttgcaattttgacatttgccagttgagctagaacttcta 181  Q
    ||||||||||||||| |||||| ||||||   ||||||||||    ||| |||||||| ||||||||||| | |||||| |||||||| ||  |||||||    
T  40786235 aaattaaactcacactcaactgcgaggtcttaggttcgaaccagggtcacgacgtccggccttgcaatttcggcatttgtcagttgagttatgacttcta 40786334  T
Q  182 gact 185  Q
    ||||    
T  40786335 gact 40786338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 128 - 178
Target Start/End: Complemental strand, 8311385 - 8311335
Alignment:
Q  128 tcatgacgtccgaccttgcaattttgacatttgccagttgagctagaactt 178  Q
    |||||| |||||| ||||||||||||||||||| |||||||| ||||||||    
T  8311385 tcatgatgtccgatcttgcaattttgacatttgtcagttgagttagaactt 8311335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 127 - 181
Target Start/End: Original strand, 32844648 - 32844702
Alignment:
Q  127 atcatgacgtccgaccttgcaattttgacatttgccagttgagctagaacttcta 181  Q
    ||||||||||||| ||||||||||| | |||||||||||||| ||| ||||||||    
T  32844648 atcatgacgtccggccttgcaatttcggcatttgccagttgaactaaaacttcta 32844702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 59 - 172
Target Start/End: Original strand, 40825161 - 40825274
Alignment:
Q  59 ttagatgaagtcgtaatccacataaattaaactcacacacaactgtgaggtcccgggttcgaacccatatcatgacgtccgaccttgcaattttgacatt 158  Q
    |||||||||||  |||||||   ||| |||||||||||||| |||  || || ||| |||||||||   ||||||||||| |||||  ||||||| ||||    
T  40825161 ttagatgaagtgataatccattgaaaataaactcacacacacctggaagatctcggattcgaacccgggtcatgacgtccaaccttataattttggcatt 40825260  T
Q  159 tgccagttgagcta 172  Q
    || |||||||||||    
T  40825261 tgacagttgagcta 40825274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 56 - 125
Target Start/End: Original strand, 43778468 - 43778537
Alignment:
Q  56 gtcttagatgaagtcgtaatccacataaattaaactcacacacaactgtgaggtcccgggttcgaaccca 125  Q
    |||||||||||||| ||||||||   ||| ||||||||||||||||||||| |||   ||||||||||||    
T  43778468 gtcttagatgaagtggtaatccaatgaaaataaactcacacacaactgtgaagtcttaggttcgaaccca 43778537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 113 - 180
Target Start/End: Complemental strand, 23957123 - 23957055
Alignment:
Q  113 gggttcgaacccatatcatgacgtccgaccttgcaattttgacattt-gccagttgagctagaacttct 180  Q
    ||||||||||||  |||||||| |||| |||  |||||| ||||||| |||||||||||||||||||||    
T  23957123 gggttcgaaccccgatcatgacatccggcctaacaatttcgacattttgccagttgagctagaacttct 23957055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 145 - 184
Target Start/End: Complemental strand, 13106395 - 13106356
Alignment:
Q  145 gcaattttgacatttgccagttgagctagaacttctagac 184  Q
    ||||||||||||||| ||||||||||||| ||||||||||    
T  13106395 gcaattttgacatttaccagttgagctaggacttctagac 13106356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 84 - 117
Target Start/End: Complemental strand, 12366828 - 12366795
Alignment:
Q  84 attaaactcacacacaactgtgaggtcccgggtt 117  Q
    |||||||||||||||||||||||||| |||||||    
T  12366828 attaaactcacacacaactgtgaggttccgggtt 12366795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 87 - 124
Target Start/End: Complemental strand, 29726112 - 29726075
Alignment:
Q  87 aaactcacacacaactgtgaggtcccgggttcgaaccc 124  Q
    ||||||| ||||||||| ||||||||||||||||||||    
T  29726112 aaactcagacacaactgcgaggtcccgggttcgaaccc 29726075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 82 - 183
Target Start/End: Original strand, 34239846 - 34239947
Alignment:
Q  82 aaattaaactcacacacaactgtgaggtcccgggttcgaacccatatcatgacgtccgaccttgcaattttgacatttgccagttgagctagaacttcta 181  Q
    |||||||||||| |||||||||| |||| | | |||||||| |   ||| |||||| |||||| |||||| | ||||||| ||| ||| ||| |||||||    
T  34239846 aaattaaactcatacacaactgtaaggttctgagttcgaactcgagtcacgacgtctgaccttacaatttcggcatttgctagtagagttaggacttcta 34239945  T
Q  182 ga 183  Q
    ||    
T  34239946 ga 34239947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 82; Significance: 1e-38; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 56 - 185
Target Start/End: Complemental strand, 56609 - 56480
Alignment:
Q  56 gtcttagatgaagtcgtaatccacataaattaaactcacacacaactgtgaggtcccgggttcgaacccatatcatgacgtccgaccttgcaattttgac 155  Q
    |||||||||||||| |||||||||  ||| |||||||||||||||||||||||||||||||||||||||   |||  ||||||||||||||||||| | |    
T  56609 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccgggtcacaacgtccgaccttgcaatttcggc 56510  T
Q  156 atttgccagttgagctagaacttctagact 185  Q
    |||||||||||||||||| |||||||||||    
T  56509 atttgccagttgagctaggacttctagact 56480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 79; Significance: 7e-37; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 56 - 186
Target Start/End: Complemental strand, 114380 - 114250
Alignment:
Q  56 gtcttagatgaagtcgtaatccacataaattaaactcacacacaactgtgaggtcccgggttcgaacccatatcatgacgtccgaccttgcaattttgac 155  Q
    |||||||||||||| |||| ||||  ||| ||||||||||||||| |||||||||||||||||||||||  ||||||||||||| |||| |||||| | |    
T  114380 gtcttagatgaagtggtaaaccactgaaactaaactcacacacaattgtgaggtcccgggttcgaacccggatcatgacgtccggccttacaatttcggc 114281  T
Q  156 atttgccagttgagctagaacttctagactg 186  Q
    |||||||||||||||||| ||||||||||||    
T  114280 atttgccagttgagctaggacttctagactg 114250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0119 (Bit Score: 77; Significance: 1e-35; HSPs: 2)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 56 - 184
Target Start/End: Original strand, 13951 - 14079
Alignment:
Q  56 gtcttagatgaagtcgtaatccacataaattaaactcacacacaactgtgaggtcccgggttcgaacccatatcatgacgtccgaccttgcaattttgac 155  Q
    |||||||||||||| |||||||||  ||| |||||||||||||||||||||||||||||||||||||||  ||||  ||||||| ||||||||||| |      
T  13951 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccggatcacaacgtccggccttgcaatttcggt 14050  T
Q  156 atttgccagttgagctagaacttctagac 184  Q
    |||||||||||||||||| ||||||||||    
T  14051 atttgccagttgagctaggacttctagac 14079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0119; HSP #2
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 56 - 184
Target Start/End: Original strand, 19631 - 19759
Alignment:
Q  56 gtcttagatgaagtcgtaatccacataaattaaactcacacacaactgtgaggtcccgggttcgaacccatatcatgacgtccgaccttgcaattttgac 155  Q
    |||||||||||||| |||||||||  ||| |||||||||||||||||||||||||||||||||||||||  ||||  ||||||| ||||||||||| |      
T  19631 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccggatcacaacgtccggccttgcaatttcggt 19730  T
Q  156 atttgccagttgagctagaacttctagac 184  Q
    |||||||||||||||||| ||||||||||    
T  19731 atttgccagttgagctaggacttctagac 19759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 73; Significance: 3e-33; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 56 - 184
Target Start/End: Original strand, 9973 - 10101
Alignment:
Q  56 gtcttagatgaagtcgtaatccacataaattaaactcacacacaactgtgaggtcccgggttcgaacccatatcatgacgtccgaccttgcaattttgac 155  Q
    |||||||||||||| |||||||||  ||| ||||||||||||||||| |||||||||||||||||||||   | | |||||||| ||||||||||| | |    
T  9973 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactatgaggtcccgggttcgaacccgggttacgacgtccggccttgcaatttcggc 10072  T
Q  156 atttgccagttgagctagaacttctagac 184  Q
    |||||||||||||||||| ||||||||||    
T  10073 atttgccagttgagctaggacttctagac 10101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067 (Bit Score: 67; Significance: 1e-29; HSPs: 1)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 56 - 185
Target Start/End: Complemental strand, 34947 - 34817
Alignment:
Q  56 gtcttagatgaagtcgtaatccacataaattaaa-ctcacacacaactgtgaggtcccgggttcgaacccatatcatgacgtccgaccttgcaattttga 154  Q
    |||||||||||||| |||||||||  |||||||| |||||| ||||||| ||||||| || ||||||||||| ||| |||||||| ||||||||||| |     
T  34947 gtcttagatgaagtggtaatccactgaaattaaaactcacatacaactgcgaggtcctggattcgaacccatgtcacgacgtccggccttgcaatttcgg 34848  T
Q  155 catttgccagttgagctagaacttctagact 185  Q
    ||||||||||||||||||| |||||| ||||    
T  34847 catttgccagttgagctaggacttctggact 34817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0352 (Bit Score: 66; Significance: 4e-29; HSPs: 1)
Name: scaffold0352
Description:

Target: scaffold0352; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 56 - 185
Target Start/End: Original strand, 8943 - 9072
Alignment:
Q  56 gtcttagatgaagtcgtaatccacataaattaaactcacacacaactgtgaggtcccgggttcgaacccatatcatgacgtccgaccttgcaattttgac 155  Q
    |||||||||||||| ||||  |||  ||||||||||||||||||||||||||||||  |||||||||||  ||||| ||||||  |||| |||||| | |    
T  8943 gtcttagatgaagtggtaaatcactgaaattaaactcacacacaactgtgaggtcctaggttcgaacccgaatcataacgtcccgccttacaatttcggc 9042  T
Q  156 atttgccagttgagctagaacttctagact 185  Q
    |||| |||||||||||||||||||||||||    
T  9043 atttaccagttgagctagaacttctagact 9072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 62; Significance: 1e-26; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 56 - 173
Target Start/End: Complemental strand, 22291 - 22174
Alignment:
Q  56 gtcttagatgaagtcgtaatccacataaattaaactcacacacaactgtgaggtcccgggttcgaacccatatcatgacgtccgaccttgcaattttgac 155  Q
    |||||||||||||| |||||||||  ||||||||||||||| |||||||||||||||||| ||||||||   ||| |||||||| |||| |||||| | |    
T  22291 gtcttagatgaagtggtaatccactgaaattaaactcacacgcaactgtgaggtcccgggctcgaacccgggtcacgacgtccggccttacaatttcggc 22192  T
Q  156 atttgccagttgagctag 173  Q
    ||||| ||||||||||||    
T  22191 atttgtcagttgagctag 22174  T

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Target: scaffold0186 (Bit Score: 51; Significance: 4e-20; HSPs: 1)
Name: scaffold0186
Description:

Target: scaffold0186; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 232 - 350
Target Start/End: Complemental strand, 20288 - 20170
Alignment:
Q  232 catgctcaagattttcttccagctattccaattgatggattaggtcagcatatgtcaccagttgagtaccgtactatccttcgatatcatcttatgattc 331  Q
    |||||||| |||||||||  |||||| ||||||||||| |||||||| ||||||||| || | |||||  || |||||||| ||||||| |||||||||     
T  20288 catgctcaggattttcttgtagctatcccaattgatgggttaggtcaacatatgtcaacattggagtatggtgctatccttagatatcaccttatgatta 20189  T
Q  332 cactttttcctattgatga 350  Q
    || | ||||||||||||||    
T  20188 cattatttcctattgatga 20170  T

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Target: scaffold0360 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0360
Description:

Target: scaffold0360; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 101 - 185
Target Start/End: Complemental strand, 14578 - 14494
Alignment:
Q  101 ctgtgaggtcccgggttcgaacccatatcatgacgtccgaccttgcaattttgacatttgccagttgagctagaacttctagact 185  Q
    ||||||||||||||||||||||||  |||| |||||||| ||||||||||| |||||||| ||| || ||||| |||| ||||||    
T  14578 ctgtgaggtcccgggttcgaacccggatcacgacgtccggccttgcaatttcgacatttgtcagctgtgctaggacttatagact 14494  T

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Target: scaffold0495 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0495
Description:

Target: scaffold0495; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 104 - 184
Target Start/End: Original strand, 3259 - 3339
Alignment:
Q  104 tgaggtcccgggttcgaacccatatcatgacgtccgaccttgcaattttgacatttgccagttgagctagaacttctagac 184  Q
    ||||||||||||||||||||| | ||| || ||||  | ||| ||||| |  |||||||||||||||||| ||||||||||    
T  3259 tgaggtcccgggttcgaacccgtgtcacgaagtccagctttgtaatttcggaatttgccagttgagctaggacttctagac 3339  T

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Target: scaffold0002 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 113 - 179
Target Start/End: Complemental strand, 411719 - 411652
Alignment:
Q  113 gggttcgaacccatatcatgacgtccgaccttgcaattttgaca-tttgccagttgagctagaacttc 179  Q
    ||||||||||||   ||||||| ||||||||  ||||||||||| ||||||||||||| |||||||||    
T  411719 gggttcgaaccccggtcatgacatccgacctaacaattttgacattttgccagttgagttagaacttc 411652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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