View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4302-Insertion-36 (Length: 172)
Name: NF4302-Insertion-36
Description: NF4302
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4302-Insertion-36 |
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| [»] chr3 (1 HSPs) |
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Alignment Details
Target: chr3 (Bit Score: 143; Significance: 2e-75; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 143; E-Value: 2e-75
Query Start/End: Original strand, 9 - 172
Target Start/End: Complemental strand, 42695089 - 42694926
Alignment:
| Q |
9 |
tatacactcctagataccaattaggtttccttaggacacttgattgatagcagaaaatagtctaaaattatgcaatagaatgatagatatcgggttcaat |
108 |
Q |
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| T |
42695089 |
tatacactcctagataccaattaggtttccttaggacacttgattgatagcagaaaatagtctaaaattatgcaatagaatgatagatatcgggttcaat |
42694990 |
T |
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| Q |
109 |
ccnnnnnnntaacaatacatcccaacaccagaagtcaaagccgtatataaatactaaagaagtg |
172 |
Q |
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| T |
42694989 |
ccagaaaaataacaatacatcccaacaccagaagtcaaagccgtatataaatactaaagaagtg |
42694926 |
T |
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