View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4302-Insertion-60 (Length: 275)

Name: NF4302-Insertion-60
Description: NF4302
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4302-Insertion-60
NF4302-Insertion-60
[»] chr7 (1 HSPs)
chr7 (1-275)||(34320047-34320322)


Alignment Details
Target: chr7 (Bit Score: 256; Significance: 1e-142; HSPs: 1)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 256; E-Value: 1e-142
Query Start/End: Original strand, 1 - 275
Target Start/End: Complemental strand, 34320322 - 34320047
Alignment:
Q  1 aaatgtggcctcaaattttctggcctaggcaatatcagggctggatgccctcagacatgattattcttacaattcctagcttttataatatgcatgatat 100  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  34320322 aaatgtggcctcaaattttctggccttggcaatatcagggctggatgccttcagacatgattattattacaattcctagcttttataatatgcatgatat 34320223  T
Q  101 ggagataaatttaatttaaaaa-gttatcaatgtctaatcttatctttgattttcaatggatagttataagtatagtgggattaaacttgactacttgag 199  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34320222 ggagataaatttaatttaaaaaagttatcaatgtctaatcttatctttgattttcaatggatagttataagtatagtgggattaaacttgactacttgag 34320123  T
Q  200 tgtgacggtggtgattaatcaattatttgcacactttatctgttaccataacatgcacgttttacactattgcaga 275  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34320122 tgtgacggtggtgattaatcaattatttgcacactttatctgttaccataacatgcacgttttacactattgcaga 34320047  T

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