View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4302-Insertion-8 (Length: 138)

Name: NF4302-Insertion-8
Description: NF4302
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4302-Insertion-8
NF4302-Insertion-8
[»] chr6 (1 HSPs)
chr6 (10-138)||(30761432-30761560)


Alignment Details
Target: chr6 (Bit Score: 125; Significance: 9e-65; HSPs: 1)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 125; E-Value: 9e-65
Query Start/End: Original strand, 10 - 138
Target Start/End: Original strand, 30761432 - 30761560
Alignment:
10 cagaatattcggagctaaaattgacaagatatttatatattatgtgctaaacttgggtgcgaaatcccggacgcacagctaaaagtgctaagattgtttg 109  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
30761432 cagaatattcggagctaaaattgacaagatatttatatattatgtgctaaacttgggtgcgaaatcccggacgcacagctaaaagtgctaagattgtttg 30761531  T
110 ttaatgatgaaaactcttggcctaatcta 138  Q
    |||||||||||||||||||| ||||||||    
30761532 ttaatgatgaaaactcttggactaatcta 30761560  T

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