View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4302_low_10 (Length: 294)
Name: NF4302_low_10
Description: NF4302
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4302_low_10 |
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Alignment Details
Target: chr8 (Bit Score: 235; Significance: 1e-130; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 235; E-Value: 1e-130
Query Start/End: Original strand, 14 - 276
Target Start/End: Complemental strand, 30402738 - 30402477
Alignment:
| Q |
14 |
attatactctacaaggcatatatagcatctgagaaattataaggttagcactggtaacagtaaaatatagctattataatcaaatattagtgaaacacct |
113 |
Q |
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| T |
30402738 |
attatactctacaaggcatatatagcatctgagaaattataaggttagcactggtaacagtaaaatatagctattataatcaaatattagtgaa-cacct |
30402640 |
T |
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| Q |
114 |
aagccagttaaagatcagaaaaacaaaaggtccgcaaacatacatgtacactaacgaataaataggcacgatgcacatacacatgaacacaatgcaagtg |
213 |
Q |
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| T |
30402639 |
aagccagctaaagatcagaaaaacaaaagctccgcaaacatacatgtacactaacgaataaataggcacgatgcacatacacatgaacacaatgcaagtg |
30402540 |
T |
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| Q |
214 |
ataacaagttataccaattacaagcgaaaatggcacacactacttcacaatacttatatttcc |
276 |
Q |
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| T |
30402539 |
ataacaagttacaccaattacaagcgaaaatggcacacactatatcacaatacttatatttcc |
30402477 |
T |
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