View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4302_low_11 (Length: 293)
Name: NF4302_low_11
Description: NF4302
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4302_low_11 |
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Alignment Details
Target: chr6 (Bit Score: 182; Significance: 2e-98; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 10 - 191
Target Start/End: Original strand, 1330115 - 1330296
Alignment:
| Q |
10 |
gcagagaagataacaaccatgaatttctttgccaatttttccaccatcttaacccgtagctaataaccccattattttcatcctcataaacttcaacaaa |
109 |
Q |
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| T |
1330115 |
gcagagaagataacaaccatgaatttctttgccaatttttccaccatcttaacccgtagctaataaccccattattttcatcctcataaacttcaacaaa |
1330214 |
T |
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| Q |
110 |
attctctttattaggagaaacaccaactccttgaaatcatataagaaaaaacataccaaatattttattgagaaccgaagta |
191 |
Q |
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| T |
1330215 |
attctctttattaggagaaacaccaactccttgaaatcatataagaaaaaacataccaaatattttattgagaaccgaagta |
1330296 |
T |
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