View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4302_low_15 (Length: 250)

Name: NF4302_low_15
Description: NF4302
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4302_low_15
NF4302_low_15
[»] chr3 (74 HSPs)
chr3 (1-239)||(47923858-47924093)
chr3 (16-149)||(1736272-1736405)
chr3 (16-149)||(3715969-3716102)
chr3 (16-149)||(18552850-18552983)
chr3 (16-242)||(36028965-36029213)
chr3 (16-149)||(40592749-40592882)
chr3 (16-149)||(21711210-21711342)
chr3 (16-149)||(26298975-26299108)
chr3 (16-149)||(48438201-48438334)
chr3 (16-149)||(30709757-30709892)
chr3 (16-149)||(8370454-8370588)
chr3 (16-151)||(40844637-40844771)
chr3 (19-151)||(25795765-25795898)
chr3 (19-151)||(24695134-24695266)
chr3 (19-149)||(3328327-3328456)
chr3 (150-242)||(40592918-40593010)
chr3 (150-242)||(48438074-48438166)
chr3 (19-151)||(37466276-37466407)
chr3 (19-149)||(1417461-1417590)
chr3 (150-239)||(3716137-3716226)
chr3 (16-149)||(6794680-6794813)
chr3 (150-239)||(8370622-8370711)
chr3 (150-242)||(27038150-27038242)
chr3 (16-149)||(27974919-27975054)
chr3 (150-242)||(30709926-30710018)
chr3 (150-240)||(26298844-26298940)
chr3 (16-133)||(16264353-16264469)
chr3 (150-242)||(27026805-27026897)
chr3 (52-151)||(27986449-27986550)
chr3 (150-235)||(40844519-40844604)
chr3 (150-242)||(1417625-1417716)
chr3 (150-242)||(24695299-24695390)
chr3 (16-149)||(32143306-32143441)
chr3 (150-242)||(35925342-35925434)
chr3 (154-235)||(16264216-16264297)
chr3 (143-240)||(39040121-39040216)
chr3 (151-239)||(1309719-1309805)
chr3 (150-242)||(6794848-6794939)
chr3 (19-83)||(8126683-8126747)
chr3 (16-149)||(27452943-27453078)
chr3 (155-242)||(8126561-8126648)
chr3 (52-148)||(33386669-33386767)
chr3 (150-239)||(1417129-1417217)
chr3 (150-239)||(27986581-27986668)
chr3 (18-149)||(35925468-35925597)
chr3 (151-239)||(32143186-32143272)
chr3 (19-115)||(3323661-3323756)
chr3 (150-217)||(3328491-3328558)
chr3 (151-235)||(1305818-1305900)
chr3 (153-239)||(33386805-33386890)
chr3 (52-149)||(39039995-39040094)
chr3 (188-239)||(47649604-47649655)
chr3 (37-149)||(26928590-26928702)
chr3 (150-242)||(37466151-37466243)
chr3 (1-90)||(4386881-4386968)
chr3 (41-148)||(25929435-25929540)
chr3 (150-239)||(27975087-27975173)
chr3 (16-133)||(40372772-40372888)
chr3 (37-149)||(8477347-8477460)
chr3 (180-242)||(21711086-21711145)
chr3 (37-133)||(2671585-2671679)
chr3 (37-133)||(7167248-7167342)
chr3 (37-133)||(8739062-8739156)
chr3 (37-133)||(9091300-9091394)
chr3 (98-148)||(32744419-32744470)
chr3 (208-242)||(3323756-3323790)
chr3 (32-78)||(21353620-21353666)
chr3 (100-148)||(23391892-23391941)
chr3 (186-239)||(27452822-27452875)
chr3 (100-148)||(29196369-29196418)
chr3 (98-149)||(5236439-5236491)
chr3 (98-149)||(29813197-29813249)
chr3 (27-63)||(32744516-32744552)
chr3 (98-149)||(51398948-51399000)
[»] chr7 (59 HSPs)
chr7 (16-149)||(46516287-46516420)
chr7 (16-149)||(29159790-29159923)
chr7 (16-149)||(55935-56067)
chr7 (19-149)||(33332430-33332560)
chr7 (16-149)||(2647673-2647806)
chr7 (16-149)||(4796644-4796777)
chr7 (19-151)||(35960801-35960933)
chr7 (19-149)||(20284076-20284205)
chr7 (16-149)||(49091648-49091781)
chr7 (150-242)||(49091522-49091614)
chr7 (16-133)||(21983287-21983405)
chr7 (19-149)||(23402994-23403123)
chr7 (143-239)||(9185301-9185396)
chr7 (1-148)||(28617189-28617334)
chr7 (150-236)||(29159669-29159755)
chr7 (16-149)||(2580377-2580509)
chr7 (150-242)||(20283949-20284041)
chr7 (150-242)||(23403158-23403250)
chr7 (150-242)||(9235700-9235794)
chr7 (150-242)||(35960674-35960768)
chr7 (150-240)||(33332595-33332685)
chr7 (16-149)||(9189985-9190118)
chr7 (143-239)||(9190146-9190241)
chr7 (153-239)||(2580251-2580336)
chr7 (150-242)||(4796812-4796907)
chr7 (150-242)||(46516455-46516548)
chr7 (16-149)||(21988895-21989027)
chr7 (16-133)||(44848662-44848778)
chr7 (16-148)||(2479323-2479455)
chr7 (150-242)||(2647841-2647934)
chr7 (150-242)||(2479199-2479289)
chr7 (143-242)||(47263540-47263637)
chr7 (151-239)||(18413506-18413592)
chr7 (153-239)||(21639673-21639757)
chr7 (153-239)||(21645871-21645955)
chr7 (16-149)||(21645991-21646126)
chr7 (55-148)||(47263664-47263757)
chr7 (100-149)||(30814572-30814621)
chr7 (1-149)||(5817234-5817380)
chr7 (52-141)||(9185178-9185267)
chr7 (150-244)||(55797-55900)
chr7 (37-149)||(18408749-18408861)
chr7 (16-149)||(21639793-21639928)
chr7 (154-239)||(18408629-18408712)
chr7 (37-149)||(18413626-18413737)
chr7 (154-242)||(21988766-21988855)
chr7 (98-149)||(27347951-27348003)
chr7 (98-149)||(43864378-43864430)
chr7 (37-133)||(2057969-2058063)
chr7 (98-148)||(41317417-41317468)
chr7 (98-147)||(14069817-14069867)
chr7 (98-147)||(14379845-14379895)
chr7 (118-151)||(9235634-9235667)
chr7 (154-242)||(21983142-21983231)
chr7 (100-148)||(41648994-41649043)
chr7 (150-242)||(44848829-44848922)
chr7 (37-149)||(1533443-1533556)
chr7 (186-242)||(3047111-3047167)
chr7 (98-149)||(48489565-48489617)
[»] scaffold0006 (6 HSPs)
scaffold0006 (16-149)||(5670-5803)
scaffold0006 (16-149)||(2479-2612)
scaffold0006 (150-242)||(2352-2444)
scaffold0006 (150-239)||(5544-5635)
scaffold0006 (37-149)||(133279-133392)
scaffold0006 (194-239)||(133469-133514)
[»] chr4 (59 HSPs)
chr4 (16-149)||(10047366-10047499)
chr4 (19-149)||(16623273-16623403)
chr4 (16-149)||(36315207-36315339)
chr4 (16-149)||(36329416-36329548)
chr4 (16-149)||(38152416-38152549)
chr4 (36-149)||(39245981-39246094)
chr4 (16-149)||(54867171-54867303)
chr4 (16-149)||(16630657-16630790)
chr4 (29-149)||(6743405-6743524)
chr4 (150-242)||(25862167-25862259)
chr4 (16-148)||(24333797-24333929)
chr4 (16-149)||(3796496-3796630)
chr4 (150-242)||(10047239-10047331)
chr4 (150-242)||(5269336-5269431)
chr4 (16-149)||(3777536-3777668)
chr4 (154-242)||(5143119-5143207)
chr4 (16-149)||(5147664-5147797)
chr4 (16-133)||(5396649-5396765)
chr4 (150-242)||(54867042-54867136)
chr4 (150-239)||(3777413-3777502)
chr4 (153-242)||(16624157-16624246)
chr4 (159-239)||(24333674-24333755)
chr4 (16-149)||(5143246-5143379)
chr4 (52-149)||(5269204-5269301)
chr4 (150-235)||(39245860-39245946)
chr4 (154-242)||(5147537-5147625)
chr4 (143-242)||(5396810-5396911)
chr4 (150-242)||(16630825-16630917)
chr4 (16-149)||(31985611-31985745)
chr4 (150-244)||(42599719-42599816)
chr4 (150-239)||(3796665-3796755)
chr4 (52-145)||(25862035-25862128)
chr4 (150-242)||(38152583-38152677)
chr4 (189-242)||(6743604-6743657)
chr4 (151-239)||(28468674-28468760)
chr4 (19-149)||(42599553-42599684)
chr4 (26-148)||(5112226-5112347)
chr4 (52-149)||(28468542-28468640)
chr4 (23-123)||(39774289-39774389)
chr4 (150-229)||(18377244-18377324)
chr4 (150-239)||(31985778-31985866)
chr4 (154-242)||(1983447-1983536)
chr4 (185-239)||(36315390-36315446)
chr4 (185-239)||(36329599-36329655)
chr4 (98-149)||(12739532-12739584)
chr4 (23-148)||(18377348-18377472)
chr4 (98-149)||(26175618-26175670)
chr4 (37-133)||(24741944-24742038)
chr4 (37-133)||(29760645-29760739)
chr4 (98-148)||(48893621-48893672)
chr4 (98-148)||(52467337-52467388)
chr4 (143-217)||(8689622-8689695)
chr4 (100-149)||(12743907-12743957)
chr4 (100-149)||(12745296-12745346)
chr4 (100-149)||(29254630-29254680)
chr4 (38-148)||(34495822-34495931)
chr4 (111-148)||(36994671-36994708)
chr4 (100-148)||(46147374-46147423)
chr4 (98-149)||(9927440-9927492)
[»] chr2 (63 HSPs)
chr2 (16-242)||(14698985-14699235)
chr2 (16-145)||(13569319-13569448)
chr2 (19-149)||(20522207-20522337)
chr2 (23-149)||(33528605-33528731)
chr2 (16-149)||(10445421-10445554)
chr2 (16-149)||(17865190-17865323)
chr2 (16-149)||(34682311-34682444)
chr2 (16-149)||(39482918-39483051)
chr2 (16-149)||(21629931-21630063)
chr2 (16-151)||(8390127-8390262)
chr2 (16-149)||(33118123-33118256)
chr2 (21-149)||(16940191-16940319)
chr2 (21-149)||(17010856-17010984)
chr2 (16-151)||(10707229-10707364)
chr2 (29-149)||(34388845-34388965)
chr2 (150-240)||(33117998-33118088)
chr2 (150-239)||(8039923-8040012)
chr2 (150-242)||(31055902-31055994)
chr2 (150-242)||(33528766-33528858)
chr2 (16-133)||(8040063-8040182)
chr2 (151-242)||(34388719-34388810)
chr2 (19-149)||(31056030-31056161)
chr2 (23-149)||(2869677-2869803)
chr2 (150-239)||(17865066-17865155)
chr2 (150-239)||(13569191-13569281)
chr2 (16-148)||(28259155-28259288)
chr2 (141-239)||(34682470-34682568)
chr2 (150-239)||(20522083-20522172)
chr2 (143-242)||(42039808-42039906)
chr2 (150-239)||(10445589-10445679)
chr2 (150-242)||(23078616-23078709)
chr2 (150-239)||(8390294-8390387)
chr2 (154-242)||(21629810-21629897)
chr2 (150-242)||(16940354-16940446)
chr2 (150-242)||(17011019-17011111)
chr2 (143-242)||(36757901-36757998)
chr2 (15-133)||(42039645-42039763)
chr2 (151-239)||(3491616-3491702)
chr2 (16-149)||(23078448-23078582)
chr2 (150-224)||(39482808-39482883)
chr2 (16-149)||(25398480-25398615)
chr2 (16-149)||(3491736-3491870)
chr2 (155-239)||(25398358-25398440)
chr2 (155-239)||(25403496-25403578)
chr2 (33-133)||(2838024-2838124)
chr2 (150-242)||(10707396-10707490)
chr2 (16-149)||(36757740-36757874)
chr2 (16-149)||(25403618-25403753)
chr2 (32-148)||(1345533-1345652)
chr2 (150-242)||(40014788-40014879)
chr2 (98-148)||(723727-723778)
chr2 (150-242)||(2869839-2869935)
chr2 (37-133)||(11098926-11099020)
chr2 (98-148)||(11151574-11151625)
chr2 (37-133)||(14291492-14291586)
chr2 (16-90)||(25407668-25407742)
chr2 (23-90)||(27149278-27149345)
chr2 (150-242)||(28259322-28259414)
chr2 (98-148)||(34139753-34139804)
chr2 (30-63)||(17490228-17490261)
chr2 (26-83)||(40014978-40015035)
chr2 (102-149)||(17057351-17057399)
chr2 (102-149)||(17085334-17085382)
[»] chr1 (52 HSPs)
chr1 (16-149)||(13598385-13598518)
chr1 (19-149)||(16124496-16124626)
chr1 (16-149)||(9476248-9476381)
chr1 (16-145)||(47703913-47704042)
chr1 (16-149)||(29651798-29651931)
chr1 (19-149)||(19072914-19073045)
chr1 (19-149)||(19120804-19120935)
chr1 (29-149)||(27104362-27104482)
chr1 (19-149)||(47098805-47098934)
chr1 (150-242)||(775532-775624)
chr1 (16-149)||(26644875-26645009)
chr1 (19-149)||(47102822-47102951)
chr1 (154-244)||(16124666-16124756)
chr1 (150-242)||(29651670-29651763)
chr1 (150-242)||(40816877-40816970)
chr1 (16-129)||(3281715-3281827)
chr1 (150-239)||(13598259-13598350)
chr1 (153-242)||(47098972-47099060)
chr1 (150-240)||(19072788-19072879)
chr1 (150-240)||(19120678-19120769)
chr1 (16-149)||(21536547-21536681)
chr1 (143-242)||(26645036-26645134)
chr1 (16-149)||(32889426-32889559)
chr1 (153-242)||(47102989-47103077)
chr1 (150-242)||(21536715-21536806)
chr1 (150-239)||(27104517-27104602)
chr1 (49-149)||(775659-775759)
chr1 (153-239)||(47704084-47704171)
chr1 (41-149)||(37069755-37069864)
chr1 (19-67)||(40816794-40816842)
chr1 (37-149)||(13604622-13604735)
chr1 (143-239)||(3281571-3281666)
chr1 (37-149)||(19361431-19361543)
chr1 (37-149)||(19380071-19380183)
chr1 (16-149)||(24202746-24202881)
chr1 (16-133)||(19358820-19358936)
chr1 (153-239)||(32889302-32889387)
chr1 (143-242)||(37069628-37069728)
chr1 (186-242)||(22819285-22819341)
chr1 (30-90)||(22819475-22819535)
chr1 (102-133)||(13137975-13138006)
chr1 (188-239)||(19359028-19359079)
chr1 (98-148)||(28265537-28265588)
chr1 (100-149)||(3157001-3157051)
chr1 (98-147)||(28220210-28220260)
chr1 (150-234)||(9023977-9024059)
chr1 (150-235)||(9476130-9476213)
chr1 (194-239)||(13604812-13604857)
chr1 (102-148)||(41361052-41361100)
chr1 (100-147)||(28223405-28223453)
chr1 (98-145)||(31659372-31659420)
chr1 (98-149)||(37559849-37559901)
[»] chr6 (34 HSPs)
chr6 (16-151)||(5572218-5572353)
chr6 (19-149)||(10077145-10077275)
chr6 (15-149)||(22963687-22963820)
chr6 (15-149)||(23824573-23824706)
chr6 (19-149)||(31979500-31979630)
chr6 (16-149)||(31086450-31086583)
chr6 (16-149)||(18232832-18232965)
chr6 (150-244)||(18232703-18232797)
chr6 (150-242)||(10077310-10077402)
chr6 (150-242)||(31979373-31979465)
chr6 (16-149)||(5757456-5757590)
chr6 (52-149)||(5017482-5017579)
chr6 (150-242)||(5572741-5572833)
chr6 (150-242)||(5017613-5017709)
chr6 (19-149)||(4629940-4630071)
chr6 (150-238)||(22963563-22963652)
chr6 (150-238)||(23824741-23824830)
chr6 (150-242)||(21355898-21355988)
chr6 (154-242)||(31086611-31086699)
chr6 (143-242)||(5757616-5757713)
chr6 (37-148)||(21356022-21356134)
chr6 (19-124)||(21801324-21801429)
chr6 (19-148)||(24435951-24436079)
chr6 (143-239)||(31936451-31936546)
chr6 (166-238)||(21801510-21801583)
chr6 (153-233)||(22708888-22708967)
chr6 (52-149)||(31936574-31936671)
chr6 (52-149)||(22709003-22709102)
chr6 (150-195)||(4629860-4629905)
chr6 (37-149)||(5674769-5674882)
chr6 (187-239)||(26258181-26258233)
chr6 (98-148)||(16569156-16569207)
chr6 (143-236)||(24436108-24436197)
chr6 (29-133)||(33335921-33336023)
[»] chr8 (43 HSPs)
chr8 (16-149)||(23799554-23799687)
chr8 (1-149)||(5702446-5702593)
chr8 (16-149)||(26403207-26403340)
chr8 (19-151)||(6127205-6127338)
chr8 (150-242)||(5702628-5702720)
chr8 (150-242)||(9765965-9766057)
chr8 (52-151)||(4696609-4696708)
chr8 (16-149)||(7412325-7412460)
chr8 (150-239)||(26403375-26403464)
chr8 (16-149)||(19752371-19752504)
chr8 (16-149)||(4456013-4456147)
chr8 (16-149)||(31071206-31071342)
chr8 (150-239)||(19752539-19752627)
chr8 (143-242)||(4455888-4455986)
chr8 (37-133)||(19175753-19175848)
chr8 (151-239)||(26287766-26287852)
chr8 (151-239)||(26313017-26313103)
chr8 (151-239)||(31071376-31071462)
chr8 (150-239)||(6127082-6127172)
chr8 (154-219)||(4696745-4696810)
chr8 (154-242)||(23799726-23799815)
chr8 (98-149)||(9765878-9765930)
chr8 (16-149)||(1261931-1262066)
chr8 (153-239)||(1262101-1262185)
chr8 (150-242)||(5990706-5990796)
chr8 (24-146)||(9054822-9054944)
chr8 (37-133)||(18853166-18853261)
chr8 (37-133)||(18870560-18870655)
chr8 (37-133)||(30655650-30655744)
chr8 (143-242)||(19175893-19175994)
chr8 (52-149)||(26287886-26287985)
chr8 (52-149)||(26301143-26301242)
chr8 (52-149)||(26313137-26313236)
chr8 (98-149)||(15212920-15212972)
chr8 (98-149)||(43036557-43036609)
chr8 (23-78)||(3051178-3051233)
chr8 (180-239)||(26301011-26301070)
chr8 (37-133)||(36979381-36979475)
chr8 (23-73)||(5990545-5990595)
chr8 (102-148)||(19491681-19491729)
chr8 (98-149)||(4733840-4733892)
chr8 (98-145)||(27811412-27811460)
chr8 (98-149)||(33352284-33352336)
[»] chr5 (41 HSPs)
chr5 (16-149)||(10281737-10281871)
chr5 (16-149)||(17003937-17004070)
chr5 (16-149)||(19588733-19588866)
chr5 (150-242)||(28832120-28832211)
chr5 (16-144)||(3880291-3880419)
chr5 (143-242)||(14520089-14520188)
chr5 (16-149)||(14520215-14520349)
chr5 (16-149)||(11916949-11917082)
chr5 (150-242)||(24553651-24553743)
chr5 (16-149)||(12084153-12084287)
chr5 (29-148)||(28832247-28832365)
chr5 (19-149)||(42127391-42127520)
chr5 (16-149)||(9353310-9353444)
chr5 (150-242)||(19588606-19588698)
chr5 (37-149)||(36932349-36932462)
chr5 (150-239)||(17004105-17004193)
chr5 (16-148)||(15464518-15464652)
chr5 (30-149)||(24553499-24553616)
chr5 (150-242)||(42127555-42127646)
chr5 (150-239)||(3880166-3880252)
chr5 (150-242)||(9353477-9353567)
chr5 (1-148)||(2630219-2630364)
chr5 (150-242)||(11181977-11182071)
chr5 (153-239)||(15464396-15464480)
chr5 (153-239)||(31300744-31300829)
chr5 (145-244)||(11917112-11917214)
chr5 (102-149)||(31300659-31300706)
chr5 (143-239)||(36932488-36932583)
chr5 (23-151)||(11181816-11181944)
chr5 (150-202)||(12084321-12084373)
chr5 (155-239)||(38192036-38192118)
chr5 (155-239)||(38219261-38219343)
chr5 (16-149)||(35387647-35387782)
chr5 (16-149)||(38192158-38192293)
chr5 (16-149)||(38219383-38219518)
chr5 (150-244)||(2630082-2630183)
chr5 (98-148)||(8565930-8565980)
chr5 (98-148)||(32636958-32637009)
chr5 (153-239)||(35387527-35387611)
chr5 (30-151)||(6741836-6741958)
chr5 (98-149)||(19806497-19806549)
[»] scaffold0176 (2 HSPs)
scaffold0176 (16-146)||(17253-17383)
scaffold0176 (150-242)||(17126-17215)
[»] scaffold0148 (2 HSPs)
scaffold0148 (16-149)||(10716-10849)
scaffold0148 (150-235)||(10595-10681)
[»] scaffold0036 (2 HSPs)
scaffold0036 (16-149)||(85670-85802)
scaffold0036 (150-242)||(85545-85636)
[»] scaffold0140 (2 HSPs)
scaffold0140 (16-148)||(8396-8530)
scaffold0140 (153-239)||(8568-8653)
[»] scaffold0087 (4 HSPs)
scaffold0087 (16-149)||(36810-36944)
scaffold0087 (16-149)||(43939-44073)
scaffold0087 (143-242)||(44099-44196)
scaffold0087 (143-242)||(36971-37069)
[»] scaffold1805 (1 HSPs)
scaffold1805 (165-242)||(1268-1344)
[»] scaffold0098 (2 HSPs)
scaffold0098 (52-151)||(45236-45337)
scaffold0098 (154-242)||(45115-45201)
[»] scaffold0188 (4 HSPs)
scaffold0188 (16-149)||(17929-18064)
scaffold0188 (16-149)||(24022-24157)
scaffold0188 (153-239)||(18100-18185)
scaffold0188 (153-239)||(24193-24278)
[»] scaffold0184 (1 HSPs)
scaffold0184 (186-244)||(29671-29729)
[»] scaffold0078 (2 HSPs)
scaffold0078 (186-244)||(43115-43173)
scaffold0078 (150-242)||(23390-23481)
[»] scaffold0066 (1 HSPs)
scaffold0066 (98-149)||(20397-20449)


Alignment Details
Target: chr3 (Bit Score: 168; Significance: 4e-90; HSPs: 74)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 168; E-Value: 4e-90
Query Start/End: Original strand, 1 - 239
Target Start/End: Original strand, 47923858 - 47924093
Alignment:
Q  1 attaggttttcctctttgtgtaagcttttaagctaatttcttgtaactcttttgtaacactttcatcatagtagattgaagggctgctctnnnnnnnaga 100  Q
    |||||||||| |||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||       |||    
T  47923858 attaggttttgctctttgtgtaaacttttaagctaatttcttgtaactcttttgtagcactttcatcatagtagattgaagggctgctctctcccctaga 47923957  T
Q  101 ttaggtcatattggaccgaactgggtcaacaatgttggtgtgtttgttcatgcttgtggtgtttctctacacttagatctaggcctgtttttgttgttgt 200  Q
    ||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||   |||||||    
T  47923958 ttaggtcatattggatcgaactgggtcaacaatcttggtgtgtttgttcatgcttgtggtgttgctctacacttagatctaggtctgttt---ttgttgt 47924054  T
Q  201 tgtttgaagacactttatccattgattaccacttccttt 239  Q
    || ||| ||||||||||||||||||||||||||||||||    
T  47924055 tgcttggagacactttatccattgattaccacttccttt 47924093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 16 - 149
Target Start/End: Original strand, 1736272 - 1736405
Alignment:
Q  16 ttgtgtaagcttttaagctaatttcttgtaactcttttgtaacactttcatcatagtagattgaagggctgctctnnnnnnnagattaggtcatattgga 115  Q
    |||||||||||| |||| ||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||       ||||||||||||||||||    
T  1736272 ttgtgtaagcttataagttaatttcttgtaactcttttgtaacactttcatcatagtggattggagggctgctctctcccccagattaggtcatattgga 1736371  T
Q  116 ccgaactgggtcaacaatgttggtgtgtttgttc 149  Q
    |||||||||||||||||| |||||||||||||||    
T  1736372 ccgaactgggtcaacaatattggtgtgtttgttc 1736405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 16 - 149
Target Start/End: Original strand, 3715969 - 3716102
Alignment:
Q  16 ttgtgtaagcttttaagctaatttcttgtaactcttttgtaacactttcatcatagtagattgaagggctgctctnnnnnnnagattaggtcatattgga 115  Q
    ||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||       ||||||||||||||||||    
T  3715969 ttgtgtaagtttgtaagctaatttcttgtaactcttttgtaacactttcatcatagtagattggagagctgctctctctcctagattaggtcatattgga 3716068  T
Q  116 ccgaactgggtcaacaatgttggtgtgtttgttc 149  Q
    |||||||||||||||||| |||||||||||||||    
T  3716069 ccgaactgggtcaacaatcttggtgtgtttgttc 3716102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 16 - 149
Target Start/End: Original strand, 18552850 - 18552983
Alignment:
Q  16 ttgtgtaagcttttaagctaatttcttgtaactcttttgtaacactttcatcatagtagattgaagggctgctctnnnnnnnagattaggtcatattgga 115  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||       ||||||||||||||||||    
T  18552850 ttgtgtaagcttataagctaatttcttgtaactcttttgtaacactttcatcatagtggattggagggctgctctctcccccagattaggtcatattgga 18552949  T
Q  116 ccgaactgggtcaacaatgttggtgtgtttgttc 149  Q
    |||||||||||||||||| ||||||| |||||||    
T  18552950 ccgaactgggtcaacaatcttggtgtatttgttc 18552983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 16 - 242
Target Start/End: Complemental strand, 36029213 - 36028965
Alignment:
Q  16 ttgtgtaagcttttaagctaatttcttgtaactcttttgtaacactttcatcatagtagattgaagggctgctctnnnnnnnagattaggtcatattgga 115  Q
    ||||||||| || |||||||||||||||||||||||||||||||||||||||||||| ||||| || |||||| |       ||||||||||||||||||    
T  36029213 ttgtgtaagtttgtaagctaatttcttgtaactcttttgtaacactttcatcatagtggattggagagctgctttctcccccagattaggtcatattgga 36029114  T
Q  116 ccgaactgggtcaacaatgttggtgtgtttgttc----------------------atgcttgtggtgtttctctacacttagatctaggcctgtttttg 193  Q
    | |||||||||||||||| | |||||||||||||                      |||||||||||||| ||||| ||||||||||||| |||||||||    
T  36029113 cagaactgggtcaacaatctcggtgtgtttgttcctttctttcattgcttatctttatgcttgtggtgttgctctatacttagatctaggtctgtttttg 36029014  T
Q  194 ttgttgttgtttgaagacactttatccattgattaccacttcctttgct 242  Q
    ||||||||| ||| ||||||||||  |||||||||||||||| ||||||    
T  36029013 ttgttgttgcttggagacactttacacattgattaccacttcatttgct 36028965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 16 - 149
Target Start/End: Original strand, 40592749 - 40592882
Alignment:
Q  16 ttgtgtaagcttttaagctaatttcttgtaactcttttgtaacactttcatcatagtagattgaagggctgctctnnnnnnnagattaggtcatattgga 115  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||| || ||| ||||       ||||||||||||||||||    
T  40592749 ttgtgtaagcttgtaagctaatttcttgtaactcttttgtaacactttcatcatagtcgattggagagcttctctctcccacagattaggtcatattgga 40592848  T
Q  116 ccgaactgggtcaacaatgttggtgtgtttgttc 149  Q
    |||||||||||||||||| |||||||||||||||    
T  40592849 ccgaactgggtcaacaatcttggtgtgtttgttc 40592882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 16 - 149
Target Start/End: Complemental strand, 21711342 - 21711210
Alignment:
Q  16 ttgtgtaagcttttaagctaatttcttgtaactcttttgtaacactttcatcatagtagattgaagggctgctctnnnnnnnagattaggtcatattgga 115  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||  || ||||||||       ||||||||||||||||||    
T  21711342 ttgtgtaagcttttaagctaatttcttgtaactcttt-gtaacactttcatcatagtggatttgagagctgctctctcccccagattaggtcatattgga 21711244  T
Q  116 ccgaactgggtcaacaatgttggtgtgtttgttc 149  Q
    |||||||||||||||||| |||||||||||||||    
T  21711243 ccgaactgggtcaacaatcttggtgtgtttgttc 21711210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 16 - 149
Target Start/End: Complemental strand, 26299108 - 26298975
Alignment:
Q  16 ttgtgtaagcttttaagctaatttcttgtaactcttttgtaacactttcatcatagtagattgaagggctgctctnnnnnnnagattaggtcatattgga 115  Q
    |||| |||| || |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||       |||||| ||||||||| |    
T  26299108 ttgtctaagtttataagctaatttcttgtaactcttttgtaacactttcatcatagtagattggagggctgctctctcccccagattatgtcatattgaa 26299009  T
Q  116 ccgaactgggtcaacaatgttggtgtgtttgttc 149  Q
    |||||||||||||||||| |||||||||||||||    
T  26299008 ccgaactgggtcaacaatcttggtgtgtttgttc 26298975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 16 - 149
Target Start/End: Complemental strand, 48438334 - 48438201
Alignment:
Q  16 ttgtgtaagcttttaagctaatttcttgtaactcttttgtaacactttcatcatagtagattgaagggctgctctnnnnnnnagattaggtcatattgga 115  Q
    |||||||||||| || ||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||       ||||||||||||||||||    
T  48438334 ttgtgtaagcttatatgctaatttcttgtaactcttttgtaacactttcatcatagtggattggagggctgctctctcccccagattaggtcatattgga 48438235  T
Q  116 ccgaactgggtcaacaatgttggtgtgtttgttc 149  Q
    ||||||| |||||| ||| |||||||||||||||    
T  48438234 ccgaactaggtcaataatcttggtgtgtttgttc 48438201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 16 - 149
Target Start/End: Original strand, 30709757 - 30709892
Alignment:
Q  16 ttgtgtaagcttttaagctaatttcttgtaactcttttgtaacactttcatcatagtagattgaagggctgctctnnnnnnnagattaggtcatattgga 115  Q
    |||||||||||| ||||||||||||||||||||||||||||||| |||||||||||| ||||| |||||||||||       ||||||||||||||||||    
T  30709757 ttgtgtaagcttataagctaatttcttgtaactcttttgtaacaatttcatcatagtggattggagggctgctctctcccccagattaggtcatattgga 30709856  T
Q  116 ccgaactgggtcaacaa--tgttggtgtgtttgttc 149  Q
    |||||||||||||||||  | |||||||||||||||    
T  30709857 ccgaactgggtcaacaatcttttggtgtgtttgttc 30709892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 16 - 149
Target Start/End: Original strand, 8370454 - 8370588
Alignment:
Q  16 ttgtgtaagcttttaagctaatttcttgtaactcttttgtaacactttcatcatagtagattgaagggctgctctnnnnnnnagattaggtcatattgga 115  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||| || ||||||||       ||||||||||||||||||    
T  8370454 ttgtgtaagcttttaagctaatttcttgtaactc-tttgtaacactttcatcatagtggattggagagctgctctctcccccagattaggtcatattgga 8370552  T
Q  116 ccgaactgggtcaacaa--tgttggtgtgtttgttc 149  Q
    |||||||||||||||||  | |||||||||||||||    
T  8370553 ccgaactgggtcaacaatcttttggtgtgtttgttc 8370588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 16 - 151
Target Start/End: Complemental strand, 40844771 - 40844637
Alignment:
Q  16 ttgtgtaagcttttaagctaatttcttgtaactcttttgtaacactttcatcatagtagattgaagggctgctctnnnnnnnagattaggtcatattgga 115  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||  |||||||||||       ||||||||||||||||||    
T  40844771 ttgtgtaagcttataagctaatttcttgtaactcttttgtaacactttcatcatagtggatttgagggctgctct-ctccccagattaggtcatattgga 40844673  T
Q  116 ccgaactgggtcaacaatgttggtgtgtttgttcat 151  Q
    ||||||||  |||||||| |||||||||| ||||||    
T  40844672 ccgaactgaatcaacaatcttggtgtgttcgttcat 40844637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 19 - 151
Target Start/End: Complemental strand, 25795898 - 25795765
Alignment:
Q  19 tgtaagcttttaagctaatttcttgtaactcttttgtaacactttcatcatagtagattgaagggctgctctnnnnnnnagattaggtcatattggaccg 118  Q
    ||||||||| |||||||||||||||||||||||| |||||||||||||| |||||||||| || ||||||||       |||||||||||||||||||||    
T  25795898 tgtaagcttataagctaatttcttgtaactctttcgtaacactttcatcttagtagattggagagctgctctctcccccagattaggtcatattggaccg 25795799  T
Q  119 aactgggtcaacaat-gttggtgtgtttgttcat 151  Q
    |||| ||||||||||  |||||||||||||||||    
T  25795798 aactaggtcaacaatctttggtgtgtttgttcat 25795765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 19 - 151
Target Start/End: Original strand, 24695134 - 24695266
Alignment:
Q  19 tgtaagcttttaagctaatttcttgtaactcttttgtaacactttcatcatagtagattgaagggctgctctnnnnnnnagattaggtcatattggaccg 118  Q
    |||||| || |||||||||||||||||||||||||||||||||||||||||||  ||||  |||| ||||||       |||||||||||||||||||||    
T  24695134 tgtaagtttataagctaatttcttgtaactcttttgtaacactttcatcatagcggattagagggttgctctctcccgtagattaggtcatattggaccg 24695233  T
Q  119 aactgggtcaacaatgttggtgtgtttgttcat 151  Q
    |||| |||||||||| |||||||||||||||||    
T  24695234 aactaggtcaacaatcttggtgtgtttgttcat 24695266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 19 - 149
Target Start/End: Original strand, 3328327 - 3328456
Alignment:
Q  19 tgtaagcttttaagctaatttcttgtaactcttttgtaacactttcatcatagtagattgaagggctgctctnnnnnnnagattaggtcatattggaccg 118  Q
    ||||||||| ||||||||||||||||||||| || |||||||||||||| |||| |||||||||||||||||       ||||||||||||||||||  |    
T  3328327 tgtaagcttataagctaatttcttgtaactcatt-gtaacactttcatcttagtggattgaagggctgctctctcctctagattaggtcatattggaatg 3328425  T
Q  119 aactgggtcaacaatgttggtgtgtttgttc 149  Q
    ||||||||||||||| |||||||||||||||    
T  3328426 aactgggtcaacaatcttggtgtgtttgttc 3328456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 150 - 242
Target Start/End: Original strand, 40592918 - 40593010
Alignment:
Q  150 atgcttgtggtgtttctctacacttagatctaggcctgtttttgttgttgttgtttgaagacactttatccattgattaccacttcctttgct 242  Q
    |||||||||||||| |||||||||||||| |||| |||||||||||||||||| ||| ||||| |||||||||||||||||||||||||||||    
T  40592918 atgcttgtggtgttgctctacacttagatttaggtctgtttttgttgttgttgcttggagacattttatccattgattaccacttcctttgct 40593010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 150 - 242
Target Start/End: Complemental strand, 48438166 - 48438074
Alignment:
Q  150 atgcttgtggtgtttctctacacttagatctaggcctgtttttgttgttgttgtttgaagacactttatccattgattaccacttcctttgct 242  Q
    |||||||||||||| ||||||||||||||||||| |||||||||||||||||| ||| ||| |||||||| ||||||||||| ||||||||||    
T  48438166 atgcttgtggtgttgctctacacttagatctaggtctgtttttgttgttgttgcttggagatactttatctattgattaccatttcctttgct 48438074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 19 - 151
Target Start/End: Complemental strand, 37466407 - 37466276
Alignment:
Q  19 tgtaagcttttaagctaatttcttgtaactcttttgtaacactttcatcatagtagattgaagggctgctctnnnnnnnagattaggtcatattggaccg 118  Q
    ||||||||| |||  |||||||||||||||| || |||||||||||||| |||| ||||| |||||| ||||       |||||||||||||||||||||    
T  37466407 tgtaagcttataaattaatttcttgtaactcatt-gtaacactttcatcttagtggattggagggctactctctcccccagattaggtcatattggaccg 37466309  T
Q  119 aactgggtcaacaatgttggtgtgtttgttcat 151  Q
    ||||| ||||||||| |||||||||||||||||    
T  37466308 aactgtgtcaacaatcttggtgtgtttgttcat 37466276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 19 - 149
Target Start/End: Original strand, 1417461 - 1417590
Alignment:
Q  19 tgtaagcttttaagctaatttcttgtaactcttttgtaacactttcatcatagtagattgaagggctgctctnnnnnnnagattaggtcatattggaccg 118  Q
    |||||| || |||||||||||||| |||||| || ||||||||||| || |||| ||||| |||| ||||||       |||||||||||||||||||||    
T  1417461 tgtaagtttataagctaatttcttataactcatt-gtaacactttcttcttagtggattggagggatgctctctcccccagattaggtcatattggaccg 1417559  T
Q  119 aactgggtcaacaatgttggtgtgtttgttc 149  Q
    ||||||||||||||| |||||||||||||||    
T  1417560 aactgggtcaacaatcttggtgtgtttgttc 1417590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 150 - 239
Target Start/End: Original strand, 3716137 - 3716226
Alignment:
Q  150 atgcttgtggtgtttctctacacttagatctaggcctgtttttgttgttgttgtttgaagacactttatccattgattaccacttccttt 239  Q
    |||||||||||||| |||||||||||||| || | |||||||||||||||||| ||| |||||||||||| |||||||||||||||||||    
T  3716137 atgcttgtggtgttgctctacacttagatttatgtctgtttttgttgttgttgcttgtagacactttatctattgattaccacttccttt 3716226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 16 - 149
Target Start/End: Original strand, 6794680 - 6794813
Alignment:
Q  16 ttgtgtaagcttttaagctaattt-cttgtaactcttttgtaacactttcatcatagtagattgaagggctgctctnnnnnnnagattaggtcatattgg 114  Q
    ||||||||||||  |||||||||| ||||||||||||| ||||||||||||||||||| ||||| || ||||||||       | |||||||||||||||    
T  6794680 ttgtgtaagcttgcaagctaattttcttgtaactcttt-gtaacactttcatcatagtggattggagagctgctctctcccccatattaggtcatattgg 6794778  T
Q  115 accgaactgggtcaacaatgttggtgtgtttgttc 149  Q
    ||| ||| ||||||||||| |||||||||||||||    
T  6794779 acctaaccgggtcaacaatcttggtgtgtttgttc 6794813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 150 - 239
Target Start/End: Original strand, 8370622 - 8370711
Alignment:
Q  150 atgcttgtggtgtttctctacacttagatctaggcctgtttttgttgttgttgtttgaagacactttatccattgattaccacttccttt 239  Q
    |||||||||||||| ||||||||||||||||||| |||||||||||||||||| ||| ||||||||||  ||||||||||| ||||||||    
T  8370622 atgcttgtggtgttgctctacacttagatctaggtctgtttttgttgttgttgcttggagacactttacacattgattacctcttccttt 8370711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 150 - 242
Target Start/End: Complemental strand, 27038242 - 27038150
Alignment:
Q  150 atgcttgtggtgtttctctacacttagatctaggcctgtttttgttgttgttgtttgaagacactttatccattgattaccacttcctttgct 242  Q
    |||||||||||||| ||||||||||||||||||  |||||||||||||||||| ||||||||||||||  |||||||||||| ||| ||||||    
T  27038242 atgcttgtggtgttgctctacacttagatctagatctgtttttgttgttgttgcttgaagacactttacacattgattaccatttcatttgct 27038150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 16 - 149
Target Start/End: Original strand, 27974919 - 27975054
Alignment:
Q  16 ttgtgtaagcttttaagctaattt-cttgtaactcttttgtaacactttcatcatagtagattgaagggctgctctnnnnnnnagattaggtcatattgg 114  Q
    ||||||||||||  |||||| ||| ||||||||||||| ||||||||||||||||||| ||||| || ||||||||       |||||||||||||||||    
T  27974919 ttgtgtaagcttgcaagctatttttcttgtaactcttt-gtaacactttcatcatagtggattggagagctgctctctcccccagattaggtcatattgg 27975017  T
Q  115 accgaactgggtcaacaa--tgttggtgtgtttgttc 149  Q
    ||||||||||||||||||  | |||||||||||||||    
T  27975018 accgaactgggtcaacaatcttttggtgtgtttgttc 27975054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 150 - 242
Target Start/End: Original strand, 30709926 - 30710018
Alignment:
Q  150 atgcttgtggtgtttctctacacttagatctaggcctgtttttgttgttgttgtttgaagacactttatccattgattaccacttcctttgct 242  Q
    |||||| ||||||| ||||| ||||||||||||| |||||||||||||||||| ||| ||||||||||  |||||||||||||||||||||||    
T  30709926 atgcttatggtgttgctctaaacttagatctaggtctgtttttgttgttgttgcttggagacactttacacattgattaccacttcctttgct 30710018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 150 - 240
Target Start/End: Complemental strand, 26298940 - 26298844
Alignment:
Q  150 atgcttgtggtgtttctctacacttagatctaggcctgtttttgttgttgttgtt------tgaagacactttatccattgattaccacttcctttg 240  Q
    |||||||||||||| |||||||||||||| |||| ||||||||||||||||||||      || |||||||||||||||||||||||||||||||||    
T  26298940 atgcttgtggtgttgctctacacttagatttaggtctgtttttgttgttgttgttgttgtttggagacactttatccattgattaccacttcctttg 26298844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 16 - 133
Target Start/End: Complemental strand, 16264469 - 16264353
Alignment:
Q  16 ttgtgtaagcttttaagctaatttcttgtaactcttttgtaacactttcatcatagtagattgaagggctgctctnnnnnnnagattaggtcatattgga 115  Q
    ||||| ||||||  |||||| |||||||||||||||| ||||||||||||||||||| ||||| || ||||||||       ||||||||||||||||||    
T  16264469 ttgtggaagcttgcaagctattttcttgtaactcttt-gtaacactttcatcatagtggattggagagctgctctctcccccagattaggtcatattgga 16264371  T
Q  116 ccgaactgggtcaacaat 133  Q
    ||||||| ||||||||||    
T  16264370 ccgaactaggtcaacaat 16264353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 150 - 242
Target Start/End: Complemental strand, 27026897 - 27026805
Alignment:
Q  150 atgcttgtggtgtttctctacacttagatctaggcctgtttttgttgttgttgtttgaagacactttatccattgattaccacttcctttgct 242  Q
    |||||||||||||| ||||||||||||||||||| |||||||| ||||||||| ||| ||||||||||  |||||||||||| ||| ||||||    
T  27026897 atgcttgtggtgttgctctacacttagatctaggtctgtttttcttgttgttgcttggagacactttacacattgattaccatttcatttgct 27026805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 52 - 151
Target Start/End: Original strand, 27986449 - 27986550
Alignment:
Q  52 ttgtaacactttcatcatagtagattgaagggctgctctnnnnnnnagattaggtcatattggaccgaactgggtcaacaa--tgttggtgtgtttgttc 149  Q
    ||||||||||||||||||||| ||||| || ||||||||       |||||||||||||||||||||||||||||||||||  | |||||||||||||||    
T  27986449 ttgtaacactttcatcatagtggattggagagctgctctctcccccagattaggtcatattggaccgaactgggtcaacaatcttttggtgtgtttgttc 27986548  T
Q  150 at 151  Q
    ||    
T  27986549 at 27986550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 150 - 235
Target Start/End: Complemental strand, 40844604 - 40844519
Alignment:
Q  150 atgcttgtggtgtttctctacacttagatctaggcctgtttttgttgttgttgtttgaagacactttatccattgattaccacttc 235  Q
    |||||||| ||||| |||||||||||||| ||||  ||||||||||||||||| ||| |||||||||||| |||||||||||||||    
T  40844604 atgcttgtagtgttgctctacacttagatttaggtttgtttttgttgttgttgcttggagacactttatctattgattaccacttc 40844519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 150 - 242
Target Start/End: Original strand, 1417625 - 1417716
Alignment:
Q  150 atgcttgtggtgtttctctacacttagatctaggcctgtttttgttgttgttgtttgaagacactttatccattgattaccacttcctttgct 242  Q
    ||||||||| |||| |||||||||||||| || |  |||||| |||||||||| |||||||||||||||| ||||||||||||||||||||||    
T  1417625 atgcttgtgatgttactctacacttagatttatgtatgtttt-gttgttgttgcttgaagacactttatctattgattaccacttcctttgct 1417716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 150 - 242
Target Start/End: Original strand, 24695299 - 24695390
Alignment:
Q  150 atgcttgtggtgtttctctacacttagatctaggcctgtttttgttgttgttgtttgaagacactttatccattgattaccacttcctttgct 242  Q
    ||||||||| |||| ||||| |||||||| |||  |||||||||||||||||| ||||||||| |||||| ||||||||||||||||||||||    
T  24695299 atgcttgtg-tgttgctctatacttagatttagctctgtttttgttgttgttgcttgaagacattttatctattgattaccacttcctttgct 24695390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 16 - 149
Target Start/End: Complemental strand, 32143441 - 32143306
Alignment:
Q  16 ttgtgtaagcttttaagctaattt-cttgtaactcttttgtaacactttcatcatagtagattgaagggctgctctnnnnnnnagattaggtcatattgg 114  Q
    ||||||||||||  |||||| ||| |||||||| |||| ||||||||||||||||||| ||||| || ||||||||       |||||||||||||||||    
T  32143441 ttgtgtaagcttgcaagctatttttcttgtaacccttt-gtaacactttcatcatagtggattggagagctgctctctcccccagattaggtcatattgg 32143343  T
Q  115 accgaactgggtcaacaa--tgttggtgtgtttgttc 149  Q
    |||||||| |||||||||  | |||||||||||||||    
T  32143342 accgaactaggtcaacaatcttttggtgtgtttgttc 32143306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 150 - 242
Target Start/End: Complemental strand, 35925434 - 35925342
Alignment:
Q  150 atgcttgtggtgtttctctacacttagatctaggcctgtttttgttgttgttgtttgaagacactttatccattgattaccacttcctttgct 242  Q
    |||||||||||||| ||||||||||||||||||| |||||||||||||||||  ||| ||||| ||||  ||||||||||||| | |||||||    
T  35925434 atgcttgtggtgttgctctacacttagatctaggtctgtttttgttgttgttacttggagacattttacacattgattaccacctgctttgct 35925342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 154 - 235
Target Start/End: Complemental strand, 16264297 - 16264216
Alignment:
Q  154 ttgtggtgtttctctacacttagatctaggcctgtttttgttgttgttgtttgaagacactttatccattgattaccacttc 235  Q
    |||||||||| |||||||||||||||||||  ||||||||||||||||  ||| ||||||||||  ||||||||||||||||    
T  16264297 ttgtggtgttgctctacacttagatctaggattgtttttgttgttgtttcttggagacactttacacattgattaccacttc 16264216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 143 - 240
Target Start/End: Original strand, 39040121 - 39040216
Alignment:
Q  143 tttgttcatgcttgtggtgtttctctacacttagatctaggcctgtttttgttgttgttgtttgaagacactttatccattgattaccacttcctttg 240  Q
    |||||| |||||||||||||| ||||||||| || |||||| ||||||| |||||||||| ||| ||||||||||  |||||||||||||||||||||    
T  39040121 tttgtttatgcttgtggtgttgctctacactaag-tctaggtctgtttt-gttgttgttgcttggagacactttacacattgattaccacttcctttg 39040216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 151 - 239
Target Start/End: Complemental strand, 1309805 - 1309719
Alignment:
Q  151 tgcttgtggtgtttctctacacttagatctaggcctgtttttgttgttgttgtttgaagacactttatccattgattaccacttccttt 239  Q
    ||||||||||||| ||||||||| ||| ||||| |||||||||||||||||| ||||||||||||||  ||| ||||||||||||||||    
T  1309805 tgcttgtggtgttgctctacact-aga-ctagggctgtttttgttgttgttgcttgaagacactttacacatagattaccacttccttt 1309719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 150 - 242
Target Start/End: Original strand, 6794848 - 6794939
Alignment:
Q  150 atgcttgtggtgtttctctacacttagatctaggcctgtttttgttgttgttgtttgaagacactttatccattgattaccacttcctttgct 242  Q
    ||||||||| || | |||||||||||||| |||| ||||||| |||||||||| ||| ||||||||| || ||||||||||||||||||||||    
T  6794848 atgcttgtgatgctactctacacttagatttaggtctgtttt-gttgttgttgcttggagacactttttctattgattaccacttcctttgct 6794939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 19 - 83
Target Start/End: Complemental strand, 8126747 - 8126683
Alignment:
Q  19 tgtaagcttttaagctaatttcttgtaactcttttgtaacactttcatcatagtagattgaaggg 83  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||| |||| ||||| ||||    
T  8126747 tgtaagcttataagctaatttcttgtaactcttttgtaacactttcatcgtagtggattggaggg 8126683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 16 - 149
Target Start/End: Complemental strand, 27453078 - 27452943
Alignment:
Q  16 ttgtgtaagcttttaagctaattt-cttgtaactcttttgtaacactttcatcatagtagattgaagggctgctctnnnnnnnagattaggtcatattgg 114  Q
    ||||||||||||  |||||| ||| |||||||| |||| ||||||||||||||||||| ||||| || ||||||||        ||||||||||||||||    
T  27453078 ttgtgtaagcttgcaagctatttttcttgtaacccttt-gtaacactttcatcatagtggattggagagctgctctctcccccggattaggtcatattgg 27452980  T
Q  115 accgaactgggtcaacaa--tgttggtgtgtttgttc 149  Q
    |||||||||| |||||||  | |||||||||||||||    
T  27452979 accgaactggatcaacaatcttttggtgtgtttgttc 27452943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 155 - 242
Target Start/End: Complemental strand, 8126648 - 8126561
Alignment:
Q  155 tgtggtgtttctctacacttagatctaggcctgtttttgttgttgttgtttgaagacactttatccattgattaccacttcctttgct 242  Q
    ||||||||| |||||||||||||| ||||  ||||||||||||||||| ||| ||||| | |||| ||||| ||||||||||||||||    
T  8126648 tgtggtgttgctctacacttagatttaggtatgtttttgttgttgttggttggagacattgtatctattgaataccacttcctttgct 8126561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 52 - 148
Target Start/End: Original strand, 33386669 - 33386767
Alignment:
Q  52 ttgtaacactttcatcatagtagattgaagggctgctctnnnnnnnagattaggtcatattggaccgaactgggtcaacaa--tgttggtgtgtttgtt 148  Q
    ||||||||||||||||||||| ||||| || ||||||||       ||||||||||||||||||||||||||| |||||||  | ||||||||||||||    
T  33386669 ttgtaacactttcatcatagtggattggagagctgctctctcccccagattaggtcatattggaccgaactggatcaacaatcttttggtgtgtttgtt 33386767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 150 - 239
Target Start/End: Complemental strand, 1417217 - 1417129
Alignment:
Q  150 atgcttgtggtgtttctctacacttagatctaggcctgtttttgttgttgttgtttgaagacactttatccattgattaccacttccttt 239  Q
    ||||||||| || | |||||||||||||| |||| ||||||| |||||||||| ||| ||||||||||  ||||||||||||||||||||    
T  1417217 atgcttgtgatgctactctacacttagatttaggtctgtttt-gttgttgttgcttggagacactttacacattgattaccacttccttt 1417129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 150 - 239
Target Start/End: Original strand, 27986581 - 27986668
Alignment:
Q  150 atgcttgtggtgtttctctacacttagatctaggcctgtttttgttgttgttgtttgaagacactttatccattgattaccacttccttt 239  Q
    |||||||||||||| ||||||||| ||| ||||| || ||||||||||||||| ||||||||||||||  ||| ||||||||||||||||    
T  27986581 atgcttgtggtgttgctctacact-aga-ctaggtctatttttgttgttgttgcttgaagacactttacacatagattaccacttccttt 27986668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 18 - 149
Target Start/End: Complemental strand, 35925597 - 35925468
Alignment:
Q  18 gtgtaagcttttaagctaatttcttgtaactcttttgtaacactttcatcatagtagattgaagggctgctctnnnnnnnagattaggtcatattggacc 117  Q
    |||||||||| ||| ||||||||||||||||| |||||||||||||||||||||| ||||| ||  |||| |        | ||||||||||||||||||    
T  35925597 gtgtaagcttataaactaatttcttgtaactc-tttgtaacactttcatcatagtggattggagaactgccc---ctcccaaattaggtcatattggacc 35925502  T
Q  118 gaactgggtcaacaa--tgttggtgtgtttgttc 149  Q
    ||||| |||||||||  | |||||||||||||||    
T  35925501 gaactaggtcaacaatcttttggtgtgtttgttc 35925468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 151 - 239
Target Start/End: Complemental strand, 32143272 - 32143186
Alignment:
Q  151 tgcttgtggtgtttctctacacttagatctaggcctgtttttgttgttgttgtttgaagacactttatccattgattaccacttccttt 239  Q
    ||||||||||||| ||||||||| ||| ||||| |||||||||||||||||| ||| ||||||||||  ||| ||||||||||||||||    
T  32143272 tgcttgtggtgttgctctacact-aga-ctaggtctgtttttgttgttgttgcttggagacactttacacatagattaccacttccttt 32143186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 19 - 115
Target Start/End: Original strand, 3323661 - 3323756
Alignment:
Q  19 tgtaagcttttaagctaatttcttgtaactcttttgtaacactttcatcatagtagattgaagggctgctctnnnnnnnagattaggtcatattgga 115  Q
    ||||||||| |||||||||||||||||||||  |||||||||||||||| |||| ||||| ||||||| |||       ||||||||||||||||||    
T  3323661 tgtaagcttataagctaatttcttgtaactc-attgtaacactttcatcttagtggattggagggctgttctctctcccagattaggtcatattgga 3323756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 150 - 217
Target Start/End: Original strand, 3328491 - 3328558
Alignment:
Q  150 atgcttgtggtgtttctctacacttagatctaggcctgtttttgttgttgttgtttgaagacacttta 217  Q
    |||||||||||||| |||||||||||||| |||| |||||||||||||||||  ||| ||||||||||    
T  3328491 atgcttgtggtgttgctctacacttagatttaggtctgtttttgttgttgtttcttggagacacttta 3328558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 151 - 235
Target Start/End: Complemental strand, 1305900 - 1305818
Alignment:
Q  151 tgcttgtggtgtttctctacacttagatctaggcctgtttttgttgttgttgtttgaagacactttatccattgattaccacttc 235  Q
    ||||||||||||| ||||||||| ||| ||||| |||||||||||||||||| ||| ||||||||||  ||| ||||||||||||    
T  1305900 tgcttgtggtgttgctctacact-aga-ctagggctgtttttgttgttgttgcttggagacactttacacatagattaccacttc 1305818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 153 - 239
Target Start/End: Original strand, 33386805 - 33386890
Alignment:
Q  153 cttgtggtgtttctctacacttagatctaggcctgtttt-tgttgttgttgtttgaagacactttatccattgattaccacttccttt 239  Q
    ||||||||||| ||||||||| ||| ||||| ||||||| ||||||||||| ||| ||||||||||  ||||||||||||||||||||    
T  33386805 cttgtggtgttgctctacact-aga-ctaggtctgttttttgttgttgttgcttggagacactttacacattgattaccacttccttt 33386890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 52 - 149
Target Start/End: Original strand, 39039995 - 39040094
Alignment:
Q  52 ttgtaacactttcatcatagtagattgaagggctgctctnnnnnnnagattaggtcatattggaccgaactgggtcaacaa--tgttggtgtgtttgttc 149  Q
    ||||||||||||||||||||| ||||| || | || |||       ||||||||||||||||||||||||| |||||||||  | |||||||||||||||    
T  39039995 ttgtaacactttcatcatagtggattggagagttgttctcttccccagattaggtcatattggaccgaactaggtcaacaatcttttggtgtgtttgttc 39040094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 188 - 239
Target Start/End: Complemental strand, 47649655 - 47649604
Alignment:
Q  188 tttttgttgttgttgtttgaagacactttatccattgattaccacttccttt 239  Q
    ||||||||||||||| ||| |||||||||||| |||||||||||||||||||    
T  47649655 tttttgttgttgttgcttggagacactttatctattgattaccacttccttt 47649604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 37 - 149
Target Start/End: Original strand, 26928590 - 26928702
Alignment:
Q  37 tttcttgtaactcttttgtaacactttcatcatagtagattgaagggctgctctnnnnnnnagattaggtcatattggaccgaactgggtcaacaa--tg 134  Q
    ||||||||||| |||| ||||||||||||||||||| ||||| || | ||||||       ||||||||||||||||| | |||||||||||||||  |     
T  26928590 tttcttgtaacccttt-gtaacactttcatcatagtggattggagagttgctctctcccccagattaggtcatattgg-ctgaactgggtcaacaatctt 26928687  T
Q  135 ttggtgtgtttgttc 149  Q
    |||||||||||||||    
T  26928688 ttggtgtgtttgttc 26928702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 150 - 242
Target Start/End: Complemental strand, 37466243 - 37466151
Alignment:
Q  150 atgcttgtggtgtttctctacacttagatctaggcctgtttttgttgttgttgtttgaagacactttatccattgattaccacttcctttgct 242  Q
    ||||||||  |||| ||||||||||||||  | | |||||||| || || || |||| |||||||| ||||||||||||||| ||||||||||    
T  37466243 atgcttgtaatgttgctctacacttagattaatgtctgttttttttttttttttttggagacacttaatccattgattaccatttcctttgct 37466151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 4386881 - 4386968
Alignment:
Q  1 attaggttttcctctttgtgtaagcttttaagctaatttcttgtaactcttttgtaacactttcatcatagtagattgaagggctgctct 90  Q
    ||||||||||  ||||||||  ||||||||||||||||||||||||| | |||||| |||||| ||| || | ||||| || ||||||||    
T  4386881 attaggttttgttctttgtg--agcttttaagctaatttcttgtaacccatttgtatcacttttatcttattggattggagagctgctct 4386968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 41 - 148
Target Start/End: Original strand, 25929435 - 25929540
Alignment:
Q  41 ttgtaactcttttgtaacactttcatcatagtagattgaagggctgctctnnnnnnnagattaggtcatattggaccgaactgggtcaacaatgttggtg 140  Q
    ||||||||| |||||| |||||||||| |||| ||||| |||||||||||       ||| |||||| ||||||||||||||||||  || || ||||||    
T  25929435 ttgtaactcatttgtatcactttcatcttagtggattggagggctgctct-ccccccagagtaggtcgtattggaccgaactgggt-taccatcttggtg 25929532  T
Q  141 tgtttgtt 148  Q
    ||||||||    
T  25929533 tgtttgtt 25929540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 150 - 239
Target Start/End: Original strand, 27975087 - 27975173
Alignment:
Q  150 atgcttgtggtgtttctctacacttagatctaggcctgtttttgttgttgttgtttgaagacactttatccattgattaccacttccttt 239  Q
    |||||||||||||| |||||||| ||||| |||| ||| ||||| |||||||| ||| ||||||||||  ||||||||| ||||||||||    
T  27975087 atgcttgtggtgttgctctacac-tagat-taggtctg-ttttgctgttgttgcttggagacactttacacattgattatcacttccttt 27975173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 16 - 133
Target Start/End: Original strand, 40372772 - 40372888
Alignment:
Q  16 ttgtgtaagcttttaagctaattt-cttgtaactcttttgtaacactttcatcatagtagattgaagggctgctctnnnnnnnagattaggtcatattgg 114  Q
    ||||||||||||  |||||| ||| |||||||| |||| ||||||||||||||||| | ||||| || ||||||||       |||||||| ||||||||    
T  40372772 ttgtgtaagcttgcaagctatttttcttgtaacccttt-gtaacactttcatcatattggattggagagctgctctctcccccagattaggccatattgg 40372870  T
Q  115 accgaactgggtcaacaat 133  Q
     | ||||||||||||||||    
T  40372871 -ctgaactgggtcaacaat 40372888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 37 - 149
Target Start/End: Complemental strand, 8477460 - 8477347
Alignment:
Q  37 tttcttgtaactcttttgtaacactttcatcatagtagattgaagggctgctctnnnnnnnagattaggtcatattggaccgaactgggtcaacaa---t 133  Q
    ||||||||||| |||| ||||||||||||||||| | ||||| || ||||||||       |||||||| |||||||| | |||||||||||||||   |    
T  8477460 tttcttgtaacccttt-gtaacactttcatcatattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaatctt 8477363  T
Q  134 gttggtgtgtttgttc 149  Q
     |||||||||||||||    
T  8477362 cttggtgtgtttgttc 8477347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 180 - 242
Target Start/End: Complemental strand, 21711145 - 21711086
Alignment:
Q  180 taggcctgtttttgttgttgttgtttgaagacactttatccattgattaccacttcctttgct 242  Q
    |||| |||||||||||||||||| ||| |||||||||||| ||   |||||||||||||||||    
T  21711145 taggtctgtttttgttgttgttgcttggagacactttatctat---ttaccacttcctttgct 21711086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 37 - 133
Target Start/End: Original strand, 2671585 - 2671679
Alignment:
Q  37 tttcttgtaactcttttgtaacactttcatcatagtagattgaagggctgctctnnnnnnnagattaggtcatattggaccgaactgggtcaacaat 133  Q
    ||||||||||| |||| ||||||||||||||||| | ||||| || ||||||||       |||||||| |||||||| | ||||||||||||||||    
T  2671585 tttcttgtaacccttt-gtaacactttcatcatattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaat 2671679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 37 - 133
Target Start/End: Complemental strand, 7167342 - 7167248
Alignment:
Q  37 tttcttgtaactcttttgtaacactttcatcatagtagattgaagggctgctctnnnnnnnagattaggtcatattggaccgaactgggtcaacaat 133  Q
    ||||||||||| |||| ||||||||||||||||| | ||||| || ||||||||       |||||||| |||||||| | ||||||||||||||||    
T  7167342 tttcttgtaacccttt-gtaacactttcatcatattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaat 7167248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 37 - 133
Target Start/End: Original strand, 8739062 - 8739156
Alignment:
Q  37 tttcttgtaactcttttgtaacactttcatcatagtagattgaagggctgctctnnnnnnnagattaggtcatattggaccgaactgggtcaacaat 133  Q
    ||||||||||| |||| ||||||||||||||||| | ||||| || ||||||||       |||||||| |||||||| | ||||||||||||||||    
T  8739062 tttcttgtaacccttt-gtaacactttcatcatattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaat 8739156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 37 - 133
Target Start/End: Original strand, 9091300 - 9091394
Alignment:
Q  37 tttcttgtaactcttttgtaacactttcatcatagtagattgaagggctgctctnnnnnnnagattaggtcatattggaccgaactgggtcaacaat 133  Q
    ||||||||||| |||| ||||||||||||||||| | ||||| || ||||||||       |||||||| |||||||| | ||||||||||||||||    
T  9091300 tttcttgtaacccttt-gtaacactttcatcatattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaat 9091394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 98 - 148
Target Start/End: Complemental strand, 32744470 - 32744419
Alignment:
Q  98 agattaggtcatattggaccgaactgggtcaacaat-gttggtgtgtttgtt 148  Q
    |||||||||||  |||||||||||||||||||||||  ||||||||||||||    
T  32744470 agattaggtcaagttggaccgaactgggtcaacaatctttggtgtgtttgtt 32744419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 208 - 242
Target Start/End: Original strand, 3323756 - 3323790
Alignment:
Q  208 agacactttatccattgattaccacttcctttgct 242  Q
    ||||||||||| |||||||||||||||||||||||    
T  3323756 agacactttatgcattgattaccacttcctttgct 3323790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 78
Target Start/End: Complemental strand, 21353666 - 21353620
Alignment:
Q  32 gctaatttcttgtaactcttttgtaacactttcatcatagtagattg 78  Q
    |||||||||||||||||| |||||| |||||||||| |||| |||||    
T  21353666 gctaatttcttgtaactcatttgtatcactttcatcttagtggattg 21353620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 100 - 148
Target Start/End: Complemental strand, 23391941 - 23391892
Alignment:
Q  100 attaggtcatattggaccgaactgggtcaacaat-gttggtgtgtttgtt 148  Q
    |||||||||  |||||||||||||||||||||||  ||||||||||||||    
T  23391941 attaggtcaagttggaccgaactgggtcaacaatctttggtgtgtttgtt 23391892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 186 - 239
Target Start/End: Complemental strand, 27452875 - 27452822
Alignment:
Q  186 tgtttttgttgttgttgtttgaagacactttatccattgattaccacttccttt 239  Q
    |||| |||||||||||| ||| ||||||||||  ||| ||||||||||||||||    
T  27452875 tgttgttgttgttgttgcttggagacactttacacatagattaccacttccttt 27452822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 100 - 148
Target Start/End: Complemental strand, 29196418 - 29196369
Alignment:
Q  100 attaggtcatattggaccgaactgggtcaacaat-gttggtgtgtttgtt 148  Q
    |||||||||  |||||||||||||||||||||||  ||||||||||||||    
T  29196418 attaggtcaagttggaccgaactgggtcaacaatctttggtgtgtttgtt 29196369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 98 - 149
Target Start/End: Complemental strand, 5236491 - 5236439
Alignment:
Q  98 agattaggtcatattggaccgaactgggtcaacaat-gttggtgtgtttgttc 149  Q
    |||||||||||  ||||||| |||||||||||||||  |||||||||||||||    
T  5236491 agattaggtcaatttggaccaaactgggtcaacaatctttggtgtgtttgttc 5236439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 98 - 149
Target Start/End: Original strand, 29813197 - 29813249
Alignment:
Q  98 agattaggtcatattggaccgaactgggtcaacaat-gttggtgtgtttgttc 149  Q
    ||||| |||||| |||||||||||||||||||||||  ||| |||||||||||    
T  29813197 agatttggtcatgttggaccgaactgggtcaacaatctttgatgtgtttgttc 29813249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 63
Target Start/End: Complemental strand, 32744552 - 32744516
Alignment:
Q  27 tttaagctaatttcttgtaactcttttgtaacacttt 63  Q
    ||||||||||||||||||||||| |||||| ||||||    
T  32744552 tttaagctaatttcttgtaactcatttgtatcacttt 32744516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 98 - 149
Target Start/End: Original strand, 51398948 - 51399000
Alignment:
Q  98 agattaggtcatattggaccgaactgggtcaacaat-gttggtgtgtttgttc 149  Q
    |||||||||||  |||||||||||| ||||||||||  |||||||||||||||    
T  51398948 agattaggtcaagttggaccgaacttggtcaacaatctttggtgtgtttgttc 51399000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 101; Significance: 4e-50; HSPs: 59)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 16 - 149
Target Start/End: Original strand, 46516287 - 46516420
Alignment:
Q  16 ttgtgtaagcttttaagctaatttcttgtaactcttttgtaacactttcatcatagtagattgaagggctgctctnnnnnnnagattaggtcatattgga 115  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||       ||||||||||||||||||    
T  46516287 ttgtgtaagcttttaagctaatttcttgtaactcttttgtaacactttcatcatagtggattggagggctgctctctcccctagattaggtcatattgga 46516386  T
Q  116 ccgaactgggtcaacaatgttggtgtgtttgttc 149  Q
    |||||||||||||||||| |||||||||||||||    
T  46516387 ccgaactgggtcaacaatcttggtgtgtttgttc 46516420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 16 - 149
Target Start/End: Complemental strand, 29159923 - 29159790
Alignment:
Q  16 ttgtgtaagcttttaagctaatttcttgtaactcttttgtaacactttcatcatagtagattgaagggctgctctnnnnnnnagattaggtcatattgga 115  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||| || ||||||||       ||||||||||||||||||    
T  29159923 ttgtgtaagcttgtaagctaatttcttgtaactcttttgtaacactttcatcatagtggattggagagctgctctctcccctagattaggtcatattgga 29159824  T
Q  116 ccgaactgggtcaacaatgttggtgtgtttgttc 149  Q
    |||||||||||||||||| |||||||||||||||    
T  29159823 ccgaactgggtcaacaatcttggtgtgtttgttc 29159790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 16 - 149
Target Start/End: Complemental strand, 56067 - 55935
Alignment:
Q  16 ttgtgtaagcttttaagctaatttcttgtaactcttttgtaacactttcatcatagtagattgaagggctgctctnnnnnnnagattaggtcatattgga 115  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||       ||||||||||||||||||    
T  56067 ttgtgtaagcttataagctaatttcttgtaactcttttgtaacactttcatcatagtggattggagggctgctct-ctccccagattaggtcatattgga 55969  T
Q  116 ccgaactgggtcaacaatgttggtgtgtttgttc 149  Q
    |||||||||||||| ||| |||||||||||||||    
T  55968 ccgaactgggtcaataatcttggtgtgtttgttc 55935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 19 - 149
Target Start/End: Original strand, 33332430 - 33332560
Alignment:
Q  19 tgtaagcttttaagctaatttcttgtaactcttttgtaacactttcatcatagtagattgaagggctgctctnnnnnnnagattaggtcatattggaccg 118  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||| |||| ||||| |||||||||||       ||||||||||||||| || ||    
T  33332430 tgtaagcttataagctaatttcttgtaactcttttgtaacactttcatcttagtggattggagggctgctctctcccccagattaggtcatattagatcg 33332529  T
Q  119 aactgggtcaacaatgttggtgtgtttgttc 149  Q
    ||||||||||||||| |||||||||||||||    
T  33332530 aactgggtcaacaatcttggtgtgtttgttc 33332560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 16 - 149
Target Start/End: Original strand, 2647673 - 2647806
Alignment:
Q  16 ttgtgtaagcttttaagctaatttcttgtaactcttttgtaacactttcatcatagtagattgaagggctgctctnnnnnnnagattaggtcatattgga 115  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||       ||| |||||||||||||     
T  2647673 ttgtgtaagcttataagctaatttcttgtaactcttttgtaacactttcatcatagtggattggagggctgctctctcccccagaataggtcatattggg 2647772  T
Q  116 ccgaactgggtcaacaatgttggtgtgtttgttc 149  Q
    ||||| |||||||||||| ||| |||||||||||    
T  2647773 ccgaattgggtcaacaatcttgatgtgtttgttc 2647806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 16 - 149
Target Start/End: Original strand, 4796644 - 4796777
Alignment:
Q  16 ttgtgtaagcttttaagctaatttcttgtaactcttttgtaacactttcatcatagtagattgaagggctgctctnnnnnnnagattaggtcatattgga 115  Q
    |||||||||||| ||||||||||||||||||||||||||||||| |||||||||||| ||||  ||||||||| |       |||||||||||| |||||    
T  4796644 ttgtgtaagcttataagctaatttcttgtaactcttttgtaacaatttcatcatagtggatttgagggctgctttctcccccagattaggtcattttgga 4796743  T
Q  116 ccgaactgggtcaacaatgttggtgtgtttgttc 149  Q
    ||||||||||| |||||| |||||||||||||||    
T  4796744 ccgaactgggttaacaatcttggtgtgtttgttc 4796777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 19 - 151
Target Start/End: Complemental strand, 35960933 - 35960801
Alignment:
Q  19 tgtaagcttttaagctaatttcttgtaactcttttgtaacactttcatcatagtagattgaagggctgctctnnnnnnnagattaggtcatattggaccg 118  Q
    ||||||||| |||||||||||||| |||||| |||||||||||||||||||||| | ||| |||||||||||       |||||||||||||||| ||||    
T  35960933 tgtaagcttataagctaatttcttctaactcatttgtaacactttcatcatagtggtttggagggctgctctctcccccagattaggtcatattgaaccg 35960834  T
Q  119 aactgggtcaacaatgttggtgtgtttgttcat 151  Q
    |||| |||||||||| |||||||||||||||||    
T  35960833 aactcggtcaacaatcttggtgtgtttgttcat 35960801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 19 - 149
Target Start/End: Complemental strand, 20284205 - 20284076
Alignment:
Q  19 tgtaagcttttaagctaatttcttgtaactcttttgtaacactttcatcatagtagattgaagggctgctctnnnnnnnagattaggtcatattggaccg 118  Q
    ||||||||| ||||||||||||||||||| | || |||||||||||||| |||| ||||| |||||||||||       |||||||||||||||||||||    
T  20284205 tgtaagcttataagctaatttcttgtaacgcatt-gtaacactttcatcttagtggattggagggctgctctctcccccagattaggtcatattggaccg 20284107  T
Q  119 aactgggtcaacaatgttggtgtgtttgttc 149  Q
    ||||||||||||||| |||||||||||||||    
T  20284106 aactgggtcaacaatcttggtgtgtttgttc 20284076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 16 - 149
Target Start/End: Complemental strand, 49091781 - 49091648
Alignment:
Q  16 ttgtgtaagcttttaagctaatttcttgtaactcttttgtaacactttcatcatagtagattgaagggctgctctnnnnnnnagattaggtcatattgga 115  Q
    |||||||||||| |||| ||||||||||||||||||||||||||||||||||||||| ||||| || | ||||||       ||||||||||||||||||    
T  49091781 ttgtgtaagcttataaggtaatttcttgtaactcttttgtaacactttcatcatagtggattggagagttgctctcttccccagattaggtcatattgga 49091682  T
Q  116 ccgaactgggtcaacaatgttggtgtgtttgttc 149  Q
    |  ||||||||||||||| |||||| ||||||||    
T  49091681 ctaaactgggtcaacaatcttggtgcgtttgttc 49091648  T

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Target: chr7; HSP #10
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 150 - 242
Target Start/End: Complemental strand, 49091614 - 49091522
Alignment:
Q  150 atgcttgtggtgtttctctacacttagatctaggcctgtttttgttgttgttgtttgaagacactttatccattgattaccacttcctttgct 242  Q
    |||||||||||||| ||||||||||| ||||||| |||||||||||||||||| ||| |||||||||||| ||||||||||||||||||||||    
T  49091614 atgcttgtggtgttgctctacacttaaatctaggtctgtttttgttgttgttgcttggagacactttatctattgattaccacttcctttgct 49091522  T

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Target: chr7; HSP #11
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 16 - 133
Target Start/End: Complemental strand, 21983405 - 21983287
Alignment:
Q  16 ttgtgtaagcttttaagctaatttcttgtaactctttt-gtaacactttcatcatagtagattgaagggctgctctnnnnnnnagattaggtcatattgg 114  Q
    ||||||||||||  |||||| ||||||||||||||||| ||||||||||||||||||| ||||| || ||||||||       |||||||||||||||||    
T  21983405 ttgtgtaagcttgcaagctattttcttgtaactctttttgtaacactttcatcatagtggattggagagctgctctctcccccagattaggtcatattgg 21983306  T
Q  115 accgaactgggtcaacaat 133  Q
    |||||||||||||||||||    
T  21983305 accgaactgggtcaacaat 21983287  T

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Target: chr7; HSP #12
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 19 - 149
Target Start/End: Original strand, 23402994 - 23403123
Alignment:
Q  19 tgtaagcttttaagctaatttcttgtaactcttttgtaacactttcatcatagtagattgaagggctgctctnnnnnnnagattaggtcatattggaccg 118  Q
    ||||||||| ||||||||||||||||||||| || |||||||||||||| |||||||||| ||||||||||        ||||||||||||||| |||||    
T  23402994 tgtaagcttataagctaatttcttgtaactcatt-gtaacactttcatcttagtagattggagggctgctcactccctcagattaggtcatattagaccg 23403092  T
Q  119 aactgggtcaacaatgttggtgtgtttgttc 149  Q
    || |||||||||||| || ||||||||||||    
T  23403093 aattgggtcaacaatcttagtgtgtttgttc 23403123  T

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Target: chr7; HSP #13
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 143 - 239
Target Start/End: Original strand, 9185301 - 9185396
Alignment:
Q  143 tttgttcatgcttgtggtgtttctctacacttagatctaggcctgtttttgttgttgttgtttgaagacactttatccattgattaccacttccttt 239  Q
    |||||| |||||||||||||||||||||||||||||||||| ||| |||||||||||||| ||| ||||||||||  ||||||||||||||||||||    
T  9185301 tttgtttatgcttgtggtgtttctctacacttagatctaggtctg-ttttgttgttgttgcttggagacactttacacattgattaccacttccttt 9185396  T

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Target: chr7; HSP #14
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 148
Target Start/End: Original strand, 28617189 - 28617334
Alignment:
Q  1 attaggttttcctctttgtgtaagcttttaagctaatttcttgtaactcttttgtaacactttcatcatagtagattgaagggctgctctnnnnnnnaga 100  Q
    ||||||||||  ||||||||  ||||||||||||||||||||||||| |  ||||| |||||||||| |||| ||||| || ||||||||       |||    
T  28617189 attaggttttgttctttgtg--agcttttaagctaatttcttgtaaccccattgtatcactttcatcttagtggattggagagctgctctctcccccaga 28617286  T
Q  101 ttaggtcatattggaccgaactgggtcaacaatgttggtgtgtttgtt 148  Q
     ||||||||||||||||||||||||| |||||| ||||||||||||||    
T  28617287 gtaggtcatattggaccgaactgggtaaacaatattggtgtgtttgtt 28617334  T

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Target: chr7; HSP #15
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 150 - 236
Target Start/End: Complemental strand, 29159755 - 29159669
Alignment:
Q  150 atgcttgtggtgtttctctacacttagatctaggcctgtttttgttgttgttgtttgaagacactttatccattgattaccacttcc 236  Q
    |||||||||||||| |||||||||||||| |||| |||||||||||||||||| ||| |||||||||||| ||||||||||||||||    
T  29159755 atgcttgtggtgttgctctacacttagatttaggtctgtttttgttgttgttgcttggagacactttatctattgattaccacttcc 29159669  T

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Target: chr7; HSP #16
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 16 - 149
Target Start/End: Complemental strand, 2580509 - 2580377
Alignment:
Q  16 ttgtgtaagcttttaagctaatttcttgtaactcttttgtaacactttcatcatagtagattgaagggctgctctnnnnnnnagattaggtcatattgga 115  Q
    ||||||||||||  |||||| ||||||||||||| || |||||||||||||| |||| ||||| || ||||||||       ||| ||||||||||||||    
T  2580509 ttgtgtaagcttgcaagctattttcttgtaactcatt-gtaacactttcatcttagtggattggagagctgctctctcccccagactaggtcatattgga 2580411  T
Q  116 ccgaactgggtcaacaatgttggtgtgtttgttc 149  Q
    ||||| |||||||||||| |||||||||||||||    
T  2580410 ccgaattgggtcaacaatcttggtgtgtttgttc 2580377  T

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Target: chr7; HSP #17
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 150 - 242
Target Start/End: Complemental strand, 20284041 - 20283949
Alignment:
Q  150 atgcttgtggtgtttctctacacttagatctaggcctgtttttgttgttgttgtttgaagacactttatccattgattaccacttcctttgct 242  Q
    |||||||||||||| |||||||||||||| |||| |||||||||||||||||  ||| ||||||||||||||||||||| |||||| ||||||    
T  20284041 atgcttgtggtgttgctctacacttagatttaggtctgtttttgttgttgtttcttggagacactttatccattgattatcacttcttttgct 20283949  T

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Target: chr7; HSP #18
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 150 - 242
Target Start/End: Original strand, 23403158 - 23403250
Alignment:
Q  150 atgcttgtggtgtttctctacacttagatctaggcctgtttttgttgttgttgtttgaagacactttatccattgattaccacttcctttgct 242  Q
    |||||||||||||| ||||||||||| || |||| |||||||||||||||||| ||| | ||||||||||||||||||| |||||||||||||    
T  23403158 atgcttgtggtgttgctctacacttacatttaggtctgtttttgttgttgttgcttggaaacactttatccattgattatcacttcctttgct 23403250  T

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Target: chr7; HSP #19
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 150 - 242
Target Start/End: Original strand, 9235700 - 9235794
Alignment:
Q  150 atgcttgtggtgtttctctacacttagatctaggcctgtttt--tgttgttgttgtttgaagacactttatccattgattaccacttcctttgct 242  Q
    |||||||||||||| ||||||| |||||| |||| |||||||  ||||||||||| ||| |||||||||||||||||||||||||||||||||||    
T  9235700 atgcttgtggtgttgctctacatttagatttaggtctgtttttttgttgttgttgcttggagacactttatccattgattaccacttcctttgct 9235794  T

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Target: chr7; HSP #20
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 150 - 242
Target Start/End: Complemental strand, 35960768 - 35960674
Alignment:
Q  150 atgcttgtggtgtttctctacacttagatctaggcctgtttt--tgttgttgttgtttgaagacactttatccattgattaccacttcctttgct 242  Q
    ||||| ||||||||||||||||||||||| ||||||||||||  ||||||||||| ||| | |||||||||| ||||||||||||||||||||||    
T  35960768 atgctggtggtgtttctctacacttagatttaggcctgttttgttgttgttgttgcttggaaacactttatctattgattaccacttcctttgct 35960674  T

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Target: chr7; HSP #21
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 150 - 240
Target Start/End: Original strand, 33332595 - 33332685
Alignment:
Q  150 atgcttgtggtgtttctctacacttagatctaggcctgtttttgttgttgttgtttgaagacactttatccattgattaccacttcctttg 240  Q
    |||||| ||||||| |||||||||||||| ||||  ||||||||||||||||||||| | |||||||||| ||||||||||||||||||||    
T  33332595 atgcttatggtgttgctctacacttagatttaggtttgtttttgttgttgttgtttggatacactttatctattgattaccacttcctttg 33332685  T

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Target: chr7; HSP #22
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 16 - 149
Target Start/End: Original strand, 9189985 - 9190118
Alignment:
Q  16 ttgtgtaagcttttaagctaattt-cttgtaactcttttgtaacactttcatcatagtagattgaagggctgctctnnnnnnnagattaggtcatattgg 114  Q
    ||||||||||||  |||||| ||| |||||||||| || |||||||||||||| |||| ||||| || ||||||||       ||| |||||||||||||    
T  9189985 ttgtgtaagcttgcaagctatttttcttgtaactcatt-gtaacactttcatcttagtggattggagagctgctctctcccccagactaggtcatattgg 9190083  T
Q  115 accgaactgggtcaacaatgttggtgtgtttgttc 149  Q
    ||||||||||||||||||| |||||||||||||||    
T  9190084 accgaactgggtcaacaatcttggtgtgtttgttc 9190118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 143 - 239
Target Start/End: Original strand, 9190146 - 9190241
Alignment:
Q  143 tttgttcatgcttgtggtgtttctctacacttagatctaggcctgtttttgttgttgttgtttgaagacactttatccattgattaccacttccttt 239  Q
    |||||| |||||||||||||| |||||||||||||||||||  |||||| |||||||||| ||| ||||||||||  ||||||||||||||||||||    
T  9190146 tttgtttatgcttgtggtgttgctctacacttagatctaggtttgtttt-gttgttgttgcttggagacactttacacattgattaccacttccttt 9190241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 153 - 239
Target Start/End: Complemental strand, 2580336 - 2580251
Alignment:
Q  153 cttgtggtgtttctctacacttagatctaggcctgtttttgttgttgttgtttgaagacactttatccattgattaccacttccttt 239  Q
    |||||||||| ||||||||||||||| |||| ||||||| |||||||||| ||||||||||||||  ||||||||||||||||||||    
T  2580336 cttgtggtgtatctctacacttagatttaggtctgtttt-gttgttgttgcttgaagacactttacacattgattaccacttccttt 2580251  T

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Target: chr7; HSP #25
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 150 - 242
Target Start/End: Original strand, 4796812 - 4796907
Alignment:
Q  150 atgcttgtggtgtttctctacacttagatctaggcctg---tttttgttgttgttgtttgaagacactttatccattgattaccacttcctttgct 242  Q
    |||||||||||||| |||||||||||||| |||| |||   ||||||||||||||| ||| ||| |||||||| ||||||||||||||||||||||    
T  4796812 atgcttgtggtgttgctctacacttagatttaggtctgttttttttgttgttgttgcttggagaaactttatctattgattaccacttcctttgct 4796907  T

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Target: chr7; HSP #26
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 150 - 242
Target Start/End: Original strand, 46516455 - 46516548
Alignment:
Q  150 atgcttgtggtgtttctctacacttagatctaggcctgtttt-tgttgttgttgtttgaagacactttatccattgattaccacttcctttgct 242  Q
    |||||| ||||||| || ||||||||||| || | ||||||| ||||||||||||||| |||||||||||| ||||||||||||||||||||||    
T  46516455 atgcttttggtgttgctttacacttagatttaagtctgttttttgttgttgttgtttggagacactttatctattgattaccacttcctttgct 46516548  T

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Target: chr7; HSP #27
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 16 - 149
Target Start/End: Complemental strand, 21989027 - 21988895
Alignment:
Q  16 ttgtgtaagcttttaagctaatttcttgtaactctttt-gtaacactttcatcatagtagattgaagggctgctctnnnnnnnagattaggtcatattgg 114  Q
    |||| |||||||  || ||| ||||||||||||||||| ||||||||||||||| ||| ||||| || | ||||||       |||||||||||||||||    
T  21989027 ttgtataagcttgcaatctattttcttgtaactctttttgtaacactttcatcaaagtggattggagagttgctctcctcc--agattaggtcatattgg 21988930  T
Q  115 accgaactgggtcaacaatgttggtgtgtttgttc 149  Q
    ||||||||||||||||||| | |||||||||||||    
T  21988929 accgaactgggtcaacaatctcggtgtgtttgttc 21988895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 16 - 133
Target Start/End: Original strand, 44848662 - 44848778
Alignment:
Q  16 ttgtgtaagcttttaagctaatttcttgtaactcttttgtaacactttcatcatagtagattgaagggctgctctnnnnnnnagattaggtcatattgga 115  Q
    ||||||||||||  |||||  |||||||||||||||| ||||||||||||||||||| ||||| || ||||||||       || ||||||||||||| |    
T  44848662 ttgtgtaagcttgcaagcttttttcttgtaactcttt-gtaacactttcatcatagtggattggagagctgctctctcccccaggttaggtcatattgaa 44848760  T
Q  116 ccgaactgggtcaacaat 133  Q
    ||||||||||||||||||    
T  44848761 ccgaactgggtcaacaat 44848778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 16 - 148
Target Start/End: Complemental strand, 2479455 - 2479323
Alignment:
Q  16 ttgtgtaagcttttaagctaatttcttgtaactcttttgtaacactttcatcatagtagattgaagggctgctctnnnnnnnagattaggtcatattgga 115  Q
    ||||||||||||  |||||| |||||| ||||||||| ||||||||||||||||||| ||||  || ||||||||       |||||||||||||||| |    
T  2479455 ttgtgtaagcttgcaagctattttcttataactcttt-gtaacactttcatcatagtggatttgagagctgctct-ccccctagattaggtcatattgaa 2479358  T
Q  116 ccgaactgggtcaacaa--tgttggtgtgtttgtt 148  Q
    |||||||||||||||||  | ||||||||||||||    
T  2479357 ccgaactgggtcaacaatcttttggtgtgtttgtt 2479323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 150 - 242
Target Start/End: Original strand, 2647841 - 2647934
Alignment:
Q  150 atgcttgtggtgtttctctacacttagatctaggcctgtttt-tgttgttgttgtttgaagacactttatccattgattaccacttcctttgct 242  Q
    |||||||||||||| ||||| |||||||| |||| ||||||| ||||||||||||||| ||| | |||||| ||||||||||| ||||||||||    
T  2647841 atgcttgtggtgttgctctaaacttagatttaggtctgttttttgttgttgttgtttggagatattttatctattgattaccatttcctttgct 2647934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 150 - 242
Target Start/End: Complemental strand, 2479289 - 2479199
Alignment:
Q  150 atgcttgtggtgtttctctacacttagatctaggcctgtttttgttgttgttgtttgaagacactttatccattgattaccacttcctttgct 242  Q
    |||||||||||||| ||||||||| ||| ||||| |||||||||||||||||| ||  ||||||||||  |||||||||||||||||||||||    
T  2479289 atgcttgtggtgttgctctacact-aga-ctaggtctgtttttgttgttgttgcttagagacactttacacattgattaccacttcctttgct 2479199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 143 - 242
Target Start/End: Complemental strand, 47263637 - 47263540
Alignment:
Q  143 tttgttcatgcttgtggtgtttctctacacttagatctaggcctgtttttgttgttgttgtttgaagacactttatccattgattaccacttcctttgct 242  Q
    |||||| |||||||||||||| ||||||||| ||| ||||| || |||||||| |||||| ||| ||||||||||  |||||||||||||||||||||||    
T  47263637 tttgtttatgcttgtggtgttgctctacact-aga-ctaggtctatttttgtttttgttgcttggagacactttacacattgattaccacttcctttgct 47263540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 151 - 239
Target Start/End: Complemental strand, 18413592 - 18413506
Alignment:
Q  151 tgcttgtggtgtttctctacacttagatctaggcctgtttttgttgttgttgtttgaagacactttatccattgattaccacttccttt 239  Q
    ||||||||||||| ||||||||| ||| ||||| |||||||||||||||||| ||| ||||||||||  ||| ||||||||||||||||    
T  18413592 tgcttgtggtgttgctctacact-aga-ctagggctgtttttgttgttgttgcttggagacactttacacatagattaccacttccttt 18413506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 153 - 239
Target Start/End: Complemental strand, 21639757 - 21639673
Alignment:
Q  153 cttgtggtgtttctctacacttagatctaggcctgtttttgttgttgttgtttgaagacactttatccattgattaccacttccttt 239  Q
    ||||||||||| ||||||||| ||| ||||| |||||||||||||||||| ||| ||||||||||  ||| |||||||||| |||||    
T  21639757 cttgtggtgttgctctacact-aga-ctagggctgtttttgttgttgttgcttggagacactttactcatagattaccactcccttt 21639673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 153 - 239
Target Start/End: Complemental strand, 21645955 - 21645871
Alignment:
Q  153 cttgtggtgtttctctacacttagatctaggcctgtttttgttgttgttgtttgaagacactttatccattgattaccacttccttt 239  Q
    ||||||||||| ||||||||| ||| ||||| |||||||||||||||||| ||| ||||||||||  ||| |||||||||| |||||    
T  21645955 cttgtggtgttgctctacact-aga-ctagggctgtttttgttgttgttgcttggagacactttactcatagattaccactcccttt 21645871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 16 - 149
Target Start/End: Complemental strand, 21646126 - 21645991
Alignment:
Q  16 ttgtgtaagcttttaagctaattt-cttgtaactcttttgtaacactttcatcatagtagattgaagggctgctctnnnnnnnagattaggtcatattgg 114  Q
    ||||||||||||  |||||| ||| |||||||| ||||| |||||||||||||||||| ||||| || ||||||||       |||||||| ||||||||    
T  21646126 ttgtgtaagcttgcaagctatttttcttgtaaccctttt-taacactttcatcatagtggattggagagctgctctcttccctagattaggccatattgg 21646028  T
Q  115 accgaactgggtcaacaa---tgttggtgtgtttgttc 149  Q
     | |||||||||||||||   | |||||||||||||||    
T  21646027 -ctgaactgggtcaacaatctttttggtgtgtttgttc 21645991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 55 - 148
Target Start/End: Complemental strand, 47263757 - 47263664
Alignment:
Q  55 taacactttcatcatagtagattgaagggctgctctnnnnnnnagattaggtcatattggaccgaactgggtcaacaa--tgttggtgtgtttgtt 148  Q
    |||||||||||||||||| ||||| || ||||||||       | |||||||||||||||||||||||||||||||||  | ||||||||||||||    
T  47263757 taacactttcatcatagtggattggagagctgctctccccc--atattaggtcatattggaccgaactgggtcaacaatcttttggtgtgtttgtt 47263664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 100 - 149
Target Start/End: Original strand, 30814572 - 30814621
Alignment:
Q  100 attaggtcatattggaccgaactgggtcaacaatgttggtgtgtttgttc 149  Q
    |||||||||  ||||||||||||||||||||||| |||||||||||||||    
T  30814572 attaggtcaagttggaccgaactgggtcaacaattttggtgtgtttgttc 30814621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 149
Target Start/End: Original strand, 5817234 - 5817380
Alignment:
Q  1 attaggttttcctctttgtgtaagcttttaagctaatttcttgtaactcttttgtaacactttcatcatagtagattgaagggctgctctnnnnnnnaga 100  Q
    ||||||||||  ||||||||  |||| ||| || ||||||||||||| | |||||| |||||||||  |||| ||||| || ||||||||       |||    
T  5817234 attaggttttgttctttgtg--agctcttatgcaaatttcttgtaacccctttgtatcactttcatattagtggattggagagctgctctctcccc-aga 5817330  T
Q  101 ttaggtcatattggaccgaactgggtcaacaat-gttggtgtgtttgttc 149  Q
     |||||||||||||||||||||| || ||||||  |||||||||||||||    
T  5817331 gtaggtcatattggaccgaactgagttaacaatctttggtgtgtttgttc 5817380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 52 - 141
Target Start/End: Original strand, 9185178 - 9185267
Alignment:
Q  52 ttgtaacactttcatcatagtagattgaagggctgctctnnnnnnnagattaggtcatattggaccgaactgggtcaacaatgttggtgt 141  Q
    |||||||||||||||| |||| ||||| || ||| ||||       ||| ||||| |||||||||||||||||||||||||| |||||||    
T  9185178 ttgtaacactttcatcttagtggattggagagcttctctctcccccagactaggttatattggaccgaactgggtcaacaatcttggtgt 9185267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 150 - 244
Target Start/End: Complemental strand, 55900 - 55797
Alignment:
Q  150 atgcttgtggtgtttctctacacttagatctaggcctgtttttgtt---------gttgttgtttgaagacactttatccattgattaccacttcctttg 240  Q
    |||||||||||||| ||||| ||||||||||||| |||||||| ||         ||||||| ||| ||||||||||  ||||||||||||||||||||     
T  55900 atgcttgtggtgttgctctatacttagatctaggtctgtttttttttattttattgttgttgcttggagacactttacacattgattaccacttccttta 55801  T
Q  241 cttc 244  Q
    ||||    
T  55800 cttc 55797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 37 - 149
Target Start/End: Complemental strand, 18408861 - 18408749
Alignment:
Q  37 tttcttgtaactcttttgtaacactttcatcatagtagattgaagggctgctctnnnnnnnagattaggtcatattggaccgaactgggtcaacaa--tg 134  Q
    ||||||||||| |||| ||||||||||||||||| | ||||| || ||||||||       |||||||| |||||||| | |||||||||||||||  |     
T  18408861 tttcttgtaacccttt-gtaacactttcatcatactggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaatctt 18408764  T
Q  135 ttggtgtgtttgttc 149  Q
    |||||||||||||||    
T  18408763 ttggtgtgtttgttc 18408749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 16 - 149
Target Start/End: Complemental strand, 21639928 - 21639793
Alignment:
Q  16 ttgtgtaagcttttaagctaattt-cttgtaactcttttgtaacactttcatcatagtagattgaagggctgctctnnnnnnnagattaggtcatattgg 114  Q
    ||||||||||||  |||||| ||| |||||||| |||| ||||||||||||| ||||| ||||| || ||||||||       |||||||| ||||||||    
T  21639928 ttgtgtaagcttgcaagctatttttcttgtaacccttt-gtaacactttcattatagtggattggagagctgctctctcccccagattaggccatattgg 21639830  T
Q  115 accgaactgggtcaacaa---tgttggtgtgtttgttc 149  Q
     | |||||||||||||||   | |||||||||||||||    
T  21639829 -ctgaactgggtcaacaatctttttggtgtgtttgttc 21639793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 154 - 239
Target Start/End: Complemental strand, 18408712 - 18408629
Alignment:
Q  154 ttgtggtgtttctctacacttagatctaggcctgtttttgttgttgttgtttgaagacactttatccattgattaccacttccttt 239  Q
    |||||||||| ||||||||| ||| ||| | ||||||||||||||||||  || ||||||||||  ||| ||||||||||||||||    
T  18408712 ttgtggtgttgctctacact-aga-ctacggctgtttttgttgttgttgcgtggagacactttacacatagattaccacttccttt 18408629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 37 - 149
Target Start/End: Complemental strand, 18413737 - 18413626
Alignment:
Q  37 tttcttgtaactcttttgtaacactttcatcatagtagattgaagggctgctctnnnnnnnagattaggtcatattggaccgaactgggtcaacaa--tg 134  Q
    ||||||||||| |||| ||||||||||||||||||| ||||| || ||||||||       |||||||| |||||||| | |||||||||||||||  |     
T  18413737 tttcttgtaacccttt-gtaacactttcatcatagtggattggagagctgctct-ctccccagattaggccatattgg-ctgaactgggtcaacaatctt 18413641  T
Q  135 ttggtgtgtttgttc 149  Q
    |||||||||||||||    
T  18413640 ttggtgtgtttgttc 18413626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 154 - 242
Target Start/End: Complemental strand, 21988855 - 21988766
Alignment:
Q  154 ttgtggtgtttctctacacttagatctaggcctgtt-tttgttgttgttgtttgaagacactttatccattgattaccacttcctttgct 242  Q
    |||||||||| ||||||||  |||| |||| |||   ||||||||||||| |||  |||||||||  |||||||||||||||||||||||    
T  21988855 ttgtggtgttgctctacacccagatttaggtctggagtttgttgttgttgcttggtgacactttacacattgattaccacttcctttgct 21988766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 98 - 149
Target Start/End: Original strand, 27347951 - 27348003
Alignment:
Q  98 agattaggtcatattggaccgaactgggtcaacaat-gttggtgtgtttgttc 149  Q
    |||||||||||  |||||||||||||||||||||||  |||||||||||||||    
T  27347951 agattaggtcaagttggaccgaactgggtcaacaatctttggtgtgtttgttc 27348003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 98 - 149
Target Start/End: Original strand, 43864378 - 43864430
Alignment:
Q  98 agattaggtcatattggaccgaactgggtcaacaat-gttggtgtgtttgttc 149  Q
    |||||||||||  ||||||||||||||||||||||| | ||||||||||||||    
T  43864378 agattaggtcaagttggaccgaactgggtcaacaatagatggtgtgtttgttc 43864430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 37 - 133
Target Start/End: Complemental strand, 2058063 - 2057969
Alignment:
Q  37 tttcttgtaactcttttgtaacactttcatcatagtagattgaagggctgctctnnnnnnnagattaggtcatattggaccgaactgggtcaacaat 133  Q
    ||||||||||| |||| ||||||||||||||||| | ||||| || ||||||||       |||||||| |||||||| | ||||||||||||||||    
T  2058063 tttcttgtaacccttt-gtaacactttcatcatattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaat 2057969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 98 - 148
Target Start/End: Complemental strand, 41317468 - 41317417
Alignment:
Q  98 agattaggtcatattggaccgaactgggtcaacaat-gttggtgtgtttgtt 148  Q
    |||||||||||  |||||||||||||||||||||||  ||||||||||||||    
T  41317468 agattaggtcaagttggaccgaactgggtcaacaatctttggtgtgtttgtt 41317417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 98 - 147
Target Start/End: Complemental strand, 14069867 - 14069817
Alignment:
Q  98 agattaggtcatattggaccgaactgggtcaacaat-gttggtgtgtttgt 147  Q
    |||||||||||  |||||||||||||||||||||||  |||||||||||||    
T  14069867 agattaggtcaagttggaccgaactgggtcaacaatctttggtgtgtttgt 14069817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 98 - 147
Target Start/End: Complemental strand, 14379895 - 14379845
Alignment:
Q  98 agattaggtcatattggaccgaactgggtcaacaat-gttggtgtgtttgt 147  Q
    |||||||||||  |||||||||||||||||||||||  |||||||||||||    
T  14379895 agattaggtcaagttggaccgaactgggtcaacaatctttggtgtgtttgt 14379845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 118 - 151
Target Start/End: Original strand, 9235634 - 9235667
Alignment:
Q  118 gaactgggtcaacaatgttggtgtgtttgttcat 151  Q
    |||||||||||||||| |||||||||||||||||    
T  9235634 gaactgggtcaacaatcttggtgtgtttgttcat 9235667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 154 - 242
Target Start/End: Complemental strand, 21983231 - 21983142
Alignment:
Q  154 ttgtggtgtttctctacacttagatctaggcctgtt-tttgttgttgttgtttgaagacactttatccattgattaccacttcctttgct 242  Q
    |||||||||| ||||||||  |||| |||| |||   ||||||||||||| ||| ||| ||||||  |||||||||||||||| ||||||    
T  21983231 ttgtggtgttgctctacacccagatttaggtctggagtttgttgttgttgcttggagatactttacacattgattaccacttcatttgct 21983142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 100 - 148
Target Start/End: Complemental strand, 41649043 - 41648994
Alignment:
Q  100 attaggtcatattggaccgaactgggtcaacaat-gttggtgtgtttgtt 148  Q
    |||||||||  |||||||||||||||||||||||  ||||||||||||||    
T  41649043 attaggtcaagttggaccgaactgggtcaacaatctttggtgtgtttgtt 41648994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 150 - 242
Target Start/End: Original strand, 44848829 - 44848922
Alignment:
Q  150 atgcttgtggtgtttctctacacttagatctaggcctg---tttttgttgttgttgtttgaagacactttatccattgattaccacttcctttgct 242  Q
    |||||||||||||| |||||||| |||| ||||| |||   ||||||||||||||| ||| |||||||||   ||||||||| |||| ||||||||    
T  44848829 atgcttgtggtgttgctctacac-taga-ctaggtctgttttttttgttgttgttgcttggagacactttgcacattgattagcactacctttgct 44848922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 37 - 149
Target Start/End: Original strand, 1533443 - 1533556
Alignment:
Q  37 tttcttgtaactcttttgtaacactttcatcatagtagattgaagggctgctctnnnnnnnagattaggtcatattggaccgaactgggtcaacaa---t 133  Q
    ||||||||||| |||| ||||||||||||||||| | ||||| || | ||||||       |||||||| |||||||| | |||||||||||||||   |    
T  1533443 tttcttgtaacccttt-gtaacactttcatcatattggattggagagatgctctctcccccagattaggccatattgg-ctgaactgggtcaacaatctt 1533540  T
Q  134 gttggtgtgtttgttc 149  Q
     |||||||||||||||    
T  1533541 attggtgtgtttgttc 1533556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 186 - 242
Target Start/End: Complemental strand, 3047167 - 3047111
Alignment:
Q  186 tgtttttgttgttgttgtttgaagacactttatccattgattaccacttcctttgct 242  Q
    |||| |||||||||||| |||| |||||||||  ||||||||| ||||| |||||||    
T  3047167 tgttattgttgttgttgcttgaggacactttactcattgattatcactttctttgct 3047111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 98 - 149
Target Start/End: Original strand, 48489565 - 48489617
Alignment:
Q  98 agattaggtcatattggaccgaactgggtcaacaat-gttggtgtgtttgttc 149  Q
    |||||||||||  |||||||||||||||| ||||||  |||||||||||||||    
T  48489565 agattaggtcaagttggaccgaactgggtaaacaatctttggtgtgtttgttc 48489617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 97; Significance: 9e-48; HSPs: 6)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 16 - 149
Target Start/End: Complemental strand, 5803 - 5670
Alignment:
Q  16 ttgtgtaagcttttaagctaatttcttgtaactcttttgtaacactttcatcatagtagattgaagggctgctctnnnnnnnagattaggtcatattgga 115  Q
    |||||||||||| ||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||       ||||||||||||||||||    
T  5803 ttgtgtaagcttataagctaatttcttgtatctcttttgtaacactttcatcatagtggattgaagggctgctctctcccccagattaggtcatattgga 5704  T
Q  116 ccgaactgggtcaacaatgttggtgtgtttgttc 149  Q
    |||||||||||||||||| |||||||||||||||    
T  5703 ccgaactgggtcaacaatcttggtgtgtttgttc 5670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #2
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 16 - 149
Target Start/End: Complemental strand, 2612 - 2479
Alignment:
Q  16 ttgtgtaagcttttaagctaatttcttgtaactcttttgtaacactttcatcatagtagattgaagggctgctctnnnnnnnagattaggtcatattgga 115  Q
    |||||||||||| |||||||||||||| ||| ||||||||||||||||||||||||| ||||| ||||||||| |       ||||||||||||||||||    
T  2612 ttgtgtaagcttataagctaatttcttataattcttttgtaacactttcatcatagtggattggagggctgctgtctcccccagattaggtcatattgga 2513  T
Q  116 ccgaactgggtcaacaatgttggtgtgtttgttc 149  Q
     ||||||||||||||||| |||||||||||||||    
T  2512 gcgaactgggtcaacaatcttggtgtgtttgttc 2479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #3
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 150 - 242
Target Start/End: Complemental strand, 2444 - 2352
Alignment:
Q  150 atgcttgtggtgtttctctacacttagatctaggcctgtttttgttgttgttgtttgaagacactttatccattgattaccacttcctttgct 242  Q
    ||||||||||||||  |||||||||||||||||| |||||||||||||||||| ||| |||||||||||| |||||| | |||||||||||||    
T  2444 atgcttgtggtgttgttctacacttagatctaggtctgtttttgttgttgttgcttggagacactttatctattgatcaacacttcctttgct 2352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 150 - 239
Target Start/End: Complemental strand, 5635 - 5544
Alignment:
Q  150 atgcttgtggtgtttctctacacttagatctaggcctgtttttgttgttgt---tgtttgaagacactttatccattgattaccacttccttt 239  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||   |||||| |||||| ||| | |||||||||||||||||||    
T  5635 atgcttgtggtgtttctctacacttagatctaggtctgtttttgttgttgttgttgtttggagacac-ttaactattgattaccacttccttt 5544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 37 - 149
Target Start/End: Original strand, 133279 - 133392
Alignment:
Q  37 tttcttgtaactcttttgtaacactttcatcatagtagattgaagggctgctctnnnnnnnagattaggtcatattggaccgaactgggtcaacaa--tg 134  Q
    |||||||||||||||| |||||| |||||||||||| ||||| || ||||||||       | |||||||||||||| ||| ||||||||||||||  |     
T  133279 tttcttgtaactcttt-gtaacattttcatcatagtggattggagagctgctctctcccccatattaggtcatattgaacctaactgggtcaacaatctt 133377  T
Q  135 ttggtgtgtttgttc 149  Q
    |||||||||||||||    
T  133378 ttggtgtgtttgttc 133392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #6
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 194 - 239
Target Start/End: Original strand, 133469 - 133514
Alignment:
Q  194 ttgttgttgtttgaagacactttatccattgattaccacttccttt 239  Q
    ||||||||||||| ||||||||||  ||||||||| ||||||||||    
T  133469 ttgttgttgtttggagacactttacacattgattatcacttccttt 133514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 97; Significance: 9e-48; HSPs: 59)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 16 - 149
Target Start/End: Complemental strand, 10047499 - 10047366
Alignment:
Q  16 ttgtgtaagcttttaagctaatttcttgtaactcttttgtaacactttcatcatagtagattgaagggctgctctnnnnnnnagattaggtcatattgga 115  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||       ||||||||||||||||||    
T  10047499 ttgtgtaagcttataagctaatttcttgtaactcttttgtaacactttcatcatagtggattggagggctgctctctcccccagattaggtcatattgga 10047400  T
Q  116 ccgaactgggtcaacaatgttggtgtgtttgttc 149  Q
    |||||||||||||||||| |||||||||||||||    
T  10047399 ccgaactgggtcaacaatcttggtgtgtttgttc 10047366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 19 - 149
Target Start/End: Original strand, 16623273 - 16623403
Alignment:
Q  19 tgtaagcttttaagctaatttcttgtaactcttttgtaacactttcatcatagtagattgaagggctgctctnnnnnnnagattaggtcatattggaccg 118  Q
    ||||||||| | |||||||||||||||||||||||||||||||||||||||||| ||||| || ||||||||       |||||||||||||||| ||||    
T  16623273 tgtaagcttattagctaatttcttgtaactcttttgtaacactttcatcatagtggattggagagctgctctctcctccagattaggtcatattgaaccg 16623372  T
Q  119 aactgggtcaacaatgttggtgtgtttgttc 149  Q
    ||||||||||||||| |||||||||||||||    
T  16623373 aactgggtcaacaatcttggtgtgtttgttc 16623403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 16 - 149
Target Start/End: Original strand, 36315207 - 36315339
Alignment:
Q  16 ttgtgtaagcttttaagctaatttcttgtaactcttttgtaacactttcatcatagtagattgaagggctgctctnnnnnnnagattaggtcatattgga 115  Q
    |||||||||||| |||||||||||||||||||||||| ||||||||||||||||||| ||||| || ||||||||       ||||||||||||||||||    
T  36315207 ttgtgtaagcttctaagctaatttcttgtaactcttt-gtaacactttcatcatagtggattggagagctgctctctcccccagattaggtcatattgga 36315305  T
Q  116 ccgaactgggtcaacaatgttggtgtgtttgttc 149  Q
    |||||||||||||||| | |||||||||||||||    
T  36315306 ccgaactgggtcaacattcttggtgtgtttgttc 36315339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 16 - 149
Target Start/End: Original strand, 36329416 - 36329548
Alignment:
Q  16 ttgtgtaagcttttaagctaatttcttgtaactcttttgtaacactttcatcatagtagattgaagggctgctctnnnnnnnagattaggtcatattgga 115  Q
    |||||||||||| |||||||||||||||||||||||| ||||||||||||||||||| ||||| || ||||||||       ||||||||||||||||||    
T  36329416 ttgtgtaagcttctaagctaatttcttgtaactcttt-gtaacactttcatcatagtggattggagagctgctctctcccccagattaggtcatattgga 36329514  T
Q  116 ccgaactgggtcaacaatgttggtgtgtttgttc 149  Q
    |||||||||||||||| | |||||||||||||||    
T  36329515 ccgaactgggtcaacattcttggtgtgtttgttc 36329548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 16 - 149
Target Start/End: Original strand, 38152416 - 38152549
Alignment:
Q  16 ttgtgtaagcttttaagctaatttcttgtaactcttttgtaacactttcatcatagtagattgaagggctgctctnnnnnnnagattaggtcatattgga 115  Q
    |||||||||||| |||||||||||||| |||||||||||||||||||||| |||||| ||||| || ||||||||       |||||| |||||||||||    
T  38152416 ttgtgtaagcttataagctaatttcttataactcttttgtaacactttcaccatagtggattggagagctgctctctcccccagattatgtcatattgga 38152515  T
Q  116 ccgaactgggtcaacaatgttggtgtgtttgttc 149  Q
    |||||||||||||||||| |||||||||||||||    
T  38152516 ccgaactgggtcaacaatcttggtgtgtttgttc 38152549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 36 - 149
Target Start/End: Complemental strand, 39246094 - 39245981
Alignment:
Q  36 atttcttgtaactcttttgtaacactttcatcatagtagattgaagggctgctctnnnnnnnagattaggtcatattggaccgaactgggtcaacaatgt 135  Q
    ||||||||||||||||||||||||||||||||||||| ||||| |||||||||||       |||||||||||||||||||||||||||||||||||| |    
T  39246094 atttcttgtaactcttttgtaacactttcatcatagtggattggagggctgctctctcccccagattaggtcatattggaccgaactgggtcaacaatct 39245995  T
Q  136 tggtgtgtttgttc 149  Q
    ||||||||||||||    
T  39245994 tggtgtgtttgttc 39245981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 16 - 149
Target Start/End: Complemental strand, 54867303 - 54867171
Alignment:
Q  16 ttgtgtaagcttttaagctaatttcttgtaactcttttgtaacactttcatcatagtagattgaagggctgctctnnnnnnnagattaggtcatattgga 115  Q
    |||||||||||| |||||||||||||| ||||| |||||||||| |||||||||||| |||||||||||||||||       ||| ||||||||||||||    
T  54867303 ttgtgtaagcttataagctaatttcttataactattttgtaacattttcatcatagttgattgaagggctgctct-ctccccagactaggtcatattgga 54867205  T
Q  116 ccgaactgggtcaacaatgttggtgtgtttgttc 149  Q
    |||||||||||||||||| |||||||||||||||    
T  54867204 ccgaactgggtcaacaatcttggtgtgtttgttc 54867171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 16 - 149
Target Start/End: Original strand, 16630657 - 16630790
Alignment:
Q  16 ttgtgtaagcttttaagctaatttcttgtaactcttttgtaacactttcatcatagtagattgaagggctgctctnnnnnnnagattaggtcatattgga 115  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||| || |||| |||       |||||| |||||||||||    
T  16630657 ttgtgtaagcttataagctaatttcttgtaactcttttgtaacactttcatcatagtggattggagagctgttctctcctccagattatgtcatattgga 16630756  T
Q  116 ccgaactgggtcaacaatgttggtgtgtttgttc 149  Q
    ||||||| |||||||||  |||||||||||||||    
T  16630757 ccgaactaggtcaacaaccttggtgtgtttgttc 16630790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 29 - 149
Target Start/End: Original strand, 6743405 - 6743524
Alignment:
Q  29 taagctaatttcttgtaactcttttgtaacactttcatcatagtagattgaagggctgctctnnnnnnnagattaggtcatattggaccgaactgggtca 128  Q
    ||||||||||| ||||| |||||||||||||||||||||||||| ||||| |||||||||||       |||||||||||||||||||||||||||||||    
T  6743405 taagctaattttttgtagctcttttgtaacactttcatcatagtggattggagggctgctctctcccgtagattaggtcatattggaccgaactgggtca 6743504  T
Q  129 acaatgttggtgtgtttgttc 149  Q
    || || |||||||||||||||    
T  6743505 ac-atcttggtgtgtttgttc 6743524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 150 - 242
Target Start/End: Original strand, 25862167 - 25862259
Alignment:
Q  150 atgcttgtggtgtttctctacacttagatctaggcctgtttttgttgttgttgtttgaagacactttatccattgattaccacttcctttgct 242  Q
    |||||||||||||| |||||||||||||| |||| |||||||||||||||||| ||| |||||||||||| ||||||||||||||||||||||    
T  25862167 atgcttgtggtgttgctctacacttagatttaggtctgtttttgttgttgttgcttggagacactttatctattgattaccacttcctttgct 25862259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 16 - 148
Target Start/End: Complemental strand, 24333929 - 24333797
Alignment:
Q  16 ttgtgtaagcttttaagctaatttcttgtaactcttttgtaacactttcatcatagtagattgaagggctgctctnnnnnnnagattaggtcatattgga 115  Q
    |||||||||||| ||||||||||| || ||||||||||||||||| ||||||||||| ||||| || ||||||||       | ||||||||||||||||    
T  24333929 ttgtgtaagcttgtaagctaattttttataactcttttgtaacacgttcatcatagtggattggagagctgctctctcccccaaattaggtcatattgga 24333830  T
Q  116 ccgaactgggtcaacaatgttggtgtgtttgtt 148  Q
    |||||||| || |||||| ||||||||||||||    
T  24333829 ccgaactgagttaacaatcttggtgtgtttgtt 24333797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 16 - 149
Target Start/End: Original strand, 3796496 - 3796630
Alignment:
Q  16 ttgtgtaagcttttaagctaatttcttgtaactcttttgtaacactttcatcatagtagattgaagggctgctctnnnnnnnagattaggtcatattgga 115  Q
    ||||| |||||| |||||||||||||||||||||||||||||||||||||||||||| ||||  || | ||||||       | ||||||||||||||||    
T  3796496 ttgtgcaagcttgtaagctaatttcttgtaactcttttgtaacactttcatcatagtggattagagagttgctctctcccccatattaggtcatattgga 3796595  T
Q  116 ccgaactgggtcaacaat-gttggtgtgtttgttc 149  Q
    | ||||||||||||||||  |||||||||||||||    
T  3796596 cggaactgggtcaacaatctttggtgtgtttgttc 3796630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 150 - 242
Target Start/End: Complemental strand, 10047331 - 10047239
Alignment:
Q  150 atgcttgtggtgtttctctacacttagatctaggcctgtttttgttgttgttgtttgaagacactttatccattgattaccacttcctttgct 242  Q
    |||||||||||||| ||||||||||||||||| | || ||||||||||| ||| ||| |||||||||||||||||||||||||||||||||||    
T  10047331 atgcttgtggtgttgctctacacttagatctatgtctatttttgttgttattgcttggagacactttatccattgattaccacttcctttgct 10047239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 150 - 242
Target Start/End: Original strand, 5269336 - 5269431
Alignment:
Q  150 atgcttgtggtgtttctctacacttagatctaggcctgtttttgttgttgttgt---ttgaagacactttatccattgattaccacttcctttgct 242  Q
    |||||||||||||| |||||||||||||||||||  | ||||||||||||||||   ||| |||||||||||||||||||||||||||||||||||    
T  5269336 atgcttgtggtgttgctctacacttagatctaggtatatttttgttgttgttgttgcttggagacactttatccattgattaccacttcctttgct 5269431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 16 - 149
Target Start/End: Complemental strand, 3777668 - 3777536
Alignment:
Q  16 ttgtgtaagcttttaagctaatttcttgtaactcttttgtaacactttcatcatagtagattgaagggctgctctnnnnnnnagattaggtcatattgga 115  Q
    ||||||||| ||  |||||| |||||||||||||||| ||||||||||||||||||| ||||| || ||| ||||       ||||||||| ||||||||    
T  3777668 ttgtgtaagtttgcaagctattttcttgtaactcttt-gtaacactttcatcatagtggattggagagctactctctcctctagattaggttatattgga 3777570  T
Q  116 ccgaactgggtcaacaatgttggtgtgtttgttc 149  Q
    |||||||||||||||||| | |||||||||||||    
T  3777569 ccgaactgggtcaacaatctcggtgtgtttgttc 3777536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 154 - 242
Target Start/End: Complemental strand, 5143207 - 5143119
Alignment:
Q  154 ttgtggtgtttctctacacttagatctaggcctgtttttgttgttgttgtttgaagacactttatccattgattaccacttcctttgct 242  Q
    ||||||||||  ||||||||||||| |||| |||||||||||||||||||||| ||||||||||  |||||||||||||||||||||||    
T  5143207 ttgtggtgttgttctacacttagatttaggtctgtttttgttgttgttgtttggagacactttacacattgattaccacttcctttgct 5143119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 16 - 149
Target Start/End: Complemental strand, 5147797 - 5147664
Alignment:
Q  16 ttgtgtaagcttttaagctaatttcttgtaactcttttgtaacactttcatcatagtagattgaagggctgctctnnnnnnnagattaggtcatattgga 115  Q
    ||||||||||||  |||||| |||||||||||| ||||||||||||||||||||| | || || || |||||||        | ||||||||||||||||    
T  5147797 ttgtgtaagcttgcaagctattttcttgtaactattttgtaacactttcatcataatggactggagagctgctccctcccccaaattaggtcatattgga 5147698  T
Q  116 ccgaactgggtcaacaatgttggtgtgtttgttc 149  Q
    |||||||||||||||||| | |||||||||||||    
T  5147697 ccgaactgggtcaacaatctcggtgtgtttgttc 5147664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 16 - 133
Target Start/End: Original strand, 5396649 - 5396765
Alignment:
Q  16 ttgtgtaagcttttaagctaatttcttgtaactcttttgtaacactttcatcatagtagattgaagggctgctctnnnnnnnagattaggtcatattgga 115  Q
    ||||||||||||  |||||| |||||||||||||||| | ||||||||||||||||| ||||| || ||||||||       ||||||||||||||||||    
T  5396649 ttgtgtaagcttgcaagctattttcttgtaactcttt-gcaacactttcatcatagtggattggagagctgctctctcctccagattaggtcatattgga 5396747  T
Q  116 ccgaactgggtcaacaat 133  Q
    ||||||||||||||||||    
T  5396748 ccgaactgggtcaacaat 5396765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 150 - 242
Target Start/End: Complemental strand, 54867136 - 54867042
Alignment:
Q  150 atgcttgtggtgtttctctacacttagatctaggcctgttttt--gttgttgttgtttgaagacactttatccattgattaccacttcctttgct 242  Q
    |||||||||||||| ||||||||||||||||| | ||||||||  |||||||||| ||| |||||||||||| ||||||||||||||||||||||    
T  54867136 atgcttgtggtgttgctctacacttagatctatgtctgtttttttgttgttgttgcttggagacactttatctattgattaccacttcctttgct 54867042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 150 - 239
Target Start/End: Complemental strand, 3777502 - 3777413
Alignment:
Q  150 atgcttgtggtgtttctctacacttagatctaggcctgtttttgttgttgttgtttgaagacactttatccattgattaccacttccttt 239  Q
    ||||||||||| ||  |||||||||||||||||| |||||||||||||||||| ||| ||||||||||  ||||||||||||||||||||    
T  3777502 atgcttgtggttttgttctacacttagatctaggtctgtttttgttgttgttgcttggagacactttacacattgattaccacttccttt 3777413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 153 - 242
Target Start/End: Original strand, 16624157 - 16624246
Alignment:
Q  153 cttgtggtgtttctctacacttagatctaggcctgtttttgttgttgttgtttgaagacactttatccattgattaccacttcctttgct 242  Q
    ||||||||||| ||||||||||| ||||||| |||||||||||||||||| ||| ||||||||||  ||||||||| |||||||||||||    
T  16624157 cttgtggtgttgctctacacttaaatctaggtctgtttttgttgttgttgcttggagacactttacacattgattatcacttcctttgct 16624246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 159 - 239
Target Start/End: Complemental strand, 24333755 - 24333674
Alignment:
Q  159 gtgtttctctacacttagatctaggcctgttttt-gttgttgttgtttgaagacactttatccattgattaccacttccttt 239  Q
    ||||| ||||||||||||||||||| |||||||| |||||||||||||| |||||||||||| |||||||||||||||||||    
T  24333755 gtgttgctctacacttagatctaggtctgttttttgttgttgttgtttggagacactttatctattgattaccacttccttt 24333674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 16 - 149
Target Start/End: Complemental strand, 5143379 - 5143246
Alignment:
Q  16 ttgtgtaagcttttaagctaatttcttgtaactcttttgtaacactttcatcatagtagattgaagggctgctctnnnnnnnagattaggtcatattgga 115  Q
    ||||||| ||||  |||||| |||||||||| | ||||||||||||||||||||||| | ||| || ||||||||       ||||||||||||||||||    
T  5143379 ttgtgtatgcttgcaagctattttcttgtaaattttttgtaacactttcatcatagtgggttggagagctgctctctcccccagattaggtcatattgga 5143280  T
Q  116 ccgaactgggtcaacaatgttggtgtgtttgttc 149  Q
    ||||||| |||||||||| |  ||||||||||||    
T  5143279 ccgaactaggtcaacaatctcagtgtgtttgttc 5143246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 52 - 149
Target Start/End: Original strand, 5269204 - 5269301
Alignment:
Q  52 ttgtaacactttcatcatagtagattgaagggctgctctnnnnnnnagattaggtcatattggaccgaactgggtcaacaatgttggtgtgtttgttc 149  Q
    ||||||||||||||||||||| ||||| |||||||||||       ||||||||||||||||||||||||| |||||||||| ||| |||||||||||    
T  5269204 ttgtaacactttcatcatagtggattggagggctgctctctcccccagattaggtcatattggaccgaactaggtcaacaatcttgttgtgtttgttc 5269301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 150 - 235
Target Start/End: Complemental strand, 39245946 - 39245860
Alignment:
Q  150 atgcttgtggtgtttctctacacttagatctaggcctgttttt-gttgttgttgtttgaagacactttatccattgattaccacttc 235  Q
    |||| ||||||||| |||||||||||||| |||| |||||||| |||||||||||||| |||||||||||| |||||||||||||||    
T  39245946 atgcctgtggtgttgctctacacttagatttaggtctgttttttgttgttgttgtttggagacactttatctattgattaccacttc 39245860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 154 - 242
Target Start/End: Complemental strand, 5147625 - 5147537
Alignment:
Q  154 ttgtggtgtttctctacacttagatctaggcctgtttttgttgttgttgtttgaagacactttatccattgattaccacttcctttgct 242  Q
    |||||||||| |||||||||||||| |||| ||||| |||||||||||  ||| ||||||||||  |||||||||||||||||||||||    
T  5147625 ttgtggtgttgctctacacttagatttaggtctgttattgttgttgtttcttggagacactttacacattgattaccacttcctttgct 5147537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 143 - 242
Target Start/End: Original strand, 5396810 - 5396911
Alignment:
Q  143 tttgttcatgcttgtggtgtttctctacact---tagatctaggcctgtttttgttgttgttgtttgaagacactttatccattgattaccacttccttt 239  Q
    |||||| |||||||||||||| |||||||||   ||| |||||| |||||||||||||||||| ||| ||||||||||  ||||||||||||||||||||    
T  5396810 tttgtttatgcttgtggtgttgctctacactaattag-tctaggtctgtttttgttgttgttgcttggagacactttacacattgattaccacttccttt 5396908  T
Q  240 gct 242  Q
    |||    
T  5396909 gct 5396911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 150 - 242
Target Start/End: Original strand, 16630825 - 16630917
Alignment:
Q  150 atgcttgtggtgtttctctacacttagatctaggcctgtttttgttgttgttgtttgaagacactttatccattgattaccacttcctttgct 242  Q
    |||||||||||||| || ||||||||||||||||  |||||||||||||| || ||| ||||||||||  |||||||||||| ||||||||||    
T  16630825 atgcttgtggtgttgctttacacttagatctaggtttgtttttgttgttgctgcttggagacactttacacattgattaccagttcctttgct 16630917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 16 - 149
Target Start/End: Original strand, 31985611 - 31985745
Alignment:
Q  16 ttgtgtaagcttttaagctaattt-cttgtaactcttttgtaacactttcatcatagtagattgaagggctgctctnnnnnnnagattaggtcatattgg 114  Q
    ||||||||||||  |||||| ||| |||||||| |||| ||||||||||||||||||| ||||| || ||||||||       |||||||||||||||||    
T  31985611 ttgtgtaagcttgcaagctatttttcttgtaacccttt-gtaacactttcatcatagtggattggagagctgctctctcccc-agattaggtcatattgg 31985708  T
Q  115 accgaactgggtcaacaa--tgttggtgtgtttgttc 149  Q
    ||||||||||||||||||  | |||||||||||||||    
T  31985709 accgaactgggtcaacaatcttttggtgtgtttgttc 31985745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 150 - 244
Target Start/End: Original strand, 42599719 - 42599816
Alignment:
Q  150 atgcttgtggtgtttctctacacttagatctaggcctgttt---ttgttgttgttgtttgaagacactttatccattgattaccacttcctttgcttc 244  Q
    |||||||||||||| ||||||| |||||||||||  |||||   |||||||||||| ||| || ||||||||| ||||||||||||||||||||||||    
T  42599719 atgcttgtggtgttgctctacatttagatctaggtttgtttgttttgttgttgttgcttggagtcactttatctattgattaccacttcctttgcttc 42599816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 150 - 239
Target Start/End: Original strand, 3796665 - 3796755
Alignment:
Q  150 atgcttgtggtgtttctctacacttagatctaggcctg-tttttgttgttgttgtttgaagacactttatccattgattaccacttccttt 239  Q
    ||||||||| |||| |||||||||||||| |||| ||| ||||||||||||||| ||| |||||||||||| |||||||| ||||||||||    
T  3796665 atgcttgtgatgttactctacacttagatttaggtctgatttttgttgttgttgcttggagacactttatctattgattatcacttccttt 3796755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 52 - 145
Target Start/End: Original strand, 25862035 - 25862128
Alignment:
Q  52 ttgtaacactttcatcatagtagattgaagggctgctctnnnnnnnagattaggtcatattggaccgaactgggtcaacaatgttggtgtgttt 145  Q
    ||||||||||||||||||||| ||||| ||||| |||||       | |||||||||||||||||||||||| ||||||||| |||||||||||    
T  25862035 ttgtaacactttcatcatagtggattggagggccgctctcttccccatattaggtcatattggaccgaactgagtcaacaatcttggtgtgttt 25862128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 150 - 242
Target Start/End: Original strand, 38152583 - 38152677
Alignment:
Q  150 atgcttgtggtgtttctctacacttagatctaggcctgttt--ttgttgttgttgtttgaagacactttatccattgattaccacttcctttgct 242  Q
    |||||||||||||| || |||||||||||||||| ||||||  |||||||||||| ||| | |||||| || |||||||||||||||| ||||||    
T  38152583 atgcttgtggtgttgctatacacttagatctaggtctgttttattgttgttgttgcttggaaacacttcatacattgattaccacttcatttgct 38152677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 189 - 242
Target Start/End: Original strand, 6743604 - 6743657
Alignment:
Q  189 ttttgttgttgttgtttgaagacactttatccattgattaccacttcctttgct 242  Q
    |||||||||||||||||| |||||||||||| ||||||||||||||||||||||    
T  6743604 ttttgttgttgttgtttggagacactttatctattgattaccacttcctttgct 6743657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 151 - 239
Target Start/End: Original strand, 28468674 - 28468760
Alignment:
Q  151 tgcttgtggtgtttctctacacttagatctaggcctgtttttgttgttgttgtttgaagacactttatccattgattaccacttccttt 239  Q
    ||||||||||||| ||||||||| ||| ||||| |||||||||||||||||| ||| ||||||||||  ||| ||||||||||||||||    
T  28468674 tgcttgtggtgttgctctacact-aga-ctagggctgtttttgttgttgttgcttggagacactttacacatagattaccacttccttt 28468760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 19 - 149
Target Start/End: Original strand, 42599553 - 42599684
Alignment:
Q  19 tgtaagcttttaagctaatttcttgtaactcttttgtaacactttcatcatagtagattgaagggctg--ctctnnnnnnnagattaggtcatattggac 116  Q
    ||||||||| |||||||||||||||||||||  |||||||| ||||||| |||| ||||| |||| ||  ||||       | |||| ||||||||||||    
T  42599553 tgtaagcttataagctaatttcttgtaactc-attgtaacattttcatcttagtggattggagggttgctctctctcccccatattatgtcatattggac 42599651  T
Q  117 cgaactgggtcaacaatgttggtgtgtttgttc 149  Q
     ||| |||||||||||| |||||||||||||||    
T  42599652 tgaattgggtcaacaatcttggtgtgtttgttc 42599684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 26 - 148
Target Start/End: Complemental strand, 5112347 - 5112226
Alignment:
Q  26 ttttaagctaatttcttgtaactcttttgtaacactttcatcatagtagattgaagggctgctctnnnnnnnagattaggtcatattggaccgaactggg 125  Q
    |||||||||||||||||||||| | ||||||||||||||||  |||| ||||| || ||||||||       | | ||| ||||||||||||||||||||    
T  5112347 ttttaagctaatttcttgtaacccatttgtaacactttcatattagtggattggagagctgctctcacccccaaagtagatcatattggaccgaactggg 5112248  T
Q  126 tcaacaatgttggtgtgtttgtt 148  Q
    |  || || ||||||||||||||    
T  5112247 t-taccatcttggtgtgtttgtt 5112226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 52 - 149
Target Start/End: Original strand, 28468542 - 28468640
Alignment:
Q  52 ttgtaacactttcatcatagtagattgaagggctgctctnnnnnnnagattaggtcatattggaccgaactgggtcaacaa--tgttggtgtgtttgttc 149  Q
    ||||||||||||||||||||| ||||| || ||||||||       ||||||||||||||||| | |||||||||||||||  | |||||||||||||||    
T  28468542 ttgtaacactttcatcatagtggattggagagctgctctctcctccagattaggtcatattgg-ctgaactgggtcaacaatcttttggtgtgtttgttc 28468640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 23 - 123
Target Start/End: Original strand, 39774289 - 39774389
Alignment:
Q  23 agcttttaagctaatttcttgtaactcttttgtaacactttcatcatagtagattgaagggctgctctnnnnnnnagattaggtcatattggaccgaact 122  Q
    |||||||||||||||||||||||||   |||||| |||||||||  |||| ||||| || ||||||||       ||| |||||||||||||||||||||    
T  39774289 agcttttaagctaatttcttgtaacctatttgtatcactttcattttagtggattggagagctgctctatcccccagagtaggtcatattggaccgaact 39774388  T
Q  123 g 123  Q
    |    
T  39774389 g 39774389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 150 - 229
Target Start/End: Complemental strand, 18377324 - 18377244
Alignment:
Q  150 atgcttgtggtgtttctctacacttagatctaggcctgttt-ttgttgttgttgtttgaagacactttatccattgattac 229  Q
    |||||||||||  | || ||||||||| | |||| |||||| |||||||||||| |||| |||||||||||||||||||||    
T  18377324 atgcttgtggttatgctttacacttagttttaggactgtttgttgttgttgttgcttgaggacactttatccattgattac 18377244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 150 - 239
Target Start/End: Original strand, 31985778 - 31985866
Alignment:
Q  150 atgcttgtggtgtttctctacacttagatctaggcctgtttt-tgttgttgttgtttgaagacactttatccattgattaccacttccttt 239  Q
    |||||||||| ||| ||||||||| ||| ||||| ||||||| ||||||||||| ||| ||||||||||  ||| ||||||||||||||||    
T  31985778 atgcttgtggagttgctctacact-aga-ctaggtctgttttttgttgttgttgcttggagacactttacacatagattaccacttccttt 31985866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 154 - 242
Target Start/End: Original strand, 1983447 - 1983536
Alignment:
Q  154 ttgtggtgtttctctacacttagatctaggcctgttt-ttgttgttgttgtttgaagacactttatccattgattaccacttcctttgct 242  Q
    |||||||| | || ||||||||||| || | | |||| |||||||||||| |||||  ||||||||||||||||||  ||||||||||||    
T  1983447 ttgtggtgatgctttacacttagatttaagtcagtttgttgttgttgttgcttgaacccactttatccattgattattacttcctttgct 1983536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 185 - 239
Target Start/End: Original strand, 36315390 - 36315446
Alignment:
Q  185 ctgtttttgttgttgttgtttgaagacac--tttatccattgattaccacttccttt 239  Q
    |||||||||||||||||| ||| ||||||  ||| ||||||||||||||||||||||    
T  36315390 ctgtttttgttgttgttgcttggagacactttttgtccattgattaccacttccttt 36315446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 185 - 239
Target Start/End: Original strand, 36329599 - 36329655
Alignment:
Q  185 ctgtttttgttgttgttgtttgaagacac--tttatccattgattaccacttccttt 239  Q
    |||||||||||||||||| ||| ||||||  ||| ||||||||||||||||||||||    
T  36329599 ctgtttttgttgttgttgcttggagacactttttgtccattgattaccacttccttt 36329655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 98 - 149
Target Start/End: Complemental strand, 12739584 - 12739532
Alignment:
Q  98 agattaggtcatattggaccgaactgggtcaacaat-gttggtgtgtttgttc 149  Q
    |||||||||||  |||||||||||||||||||||||  |||||||||||||||    
T  12739584 agattaggtcaagttggaccgaactgggtcaacaatctttggtgtgtttgttc 12739532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 23 - 148
Target Start/End: Complemental strand, 18377472 - 18377348
Alignment:
Q  23 agcttttaagctaatttcttgtaactcttttgtaacactttcatcatagtagattgaagggctgctctnnnnnnnagattaggtcatattggaccgaact 122  Q
    |||||||||||| ||||||| |||| | |||||| |||||||||| |||| || || |||||||||||       ||| |||||||||| | || |||||    
T  18377472 agcttttaagctgatttcttataacccatttgtatcactttcatcttagtggaatggagggctgctctctcctccagagtaggtcatatagaactgaact 18377373  T
Q  123 gggtcaacaatgttggtgtgtttgtt 148  Q
    ||||  || || ||||||||||||||    
T  18377372 gggt-taccatcttggtgtgtttgtt 18377348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 98 - 149
Target Start/End: Complemental strand, 26175670 - 26175618
Alignment:
Q  98 agattaggtcatattggaccgaactgggtcaacaat-gttggtgtgtttgttc 149  Q
    |||||||||||  |||||||||||||||||||||||  |||||||||||||||    
T  26175670 agattaggtcaagttggaccgaactgggtcaacaatctttggtgtgtttgttc 26175618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 37 - 133
Target Start/End: Complemental strand, 24742038 - 24741944
Alignment:
Q  37 tttcttgtaactcttttgtaacactttcatcatagtagattgaagggctgctctnnnnnnnagattaggtcatattggaccgaactgggtcaacaat 133  Q
    ||||||||||| |||| ||||||||||||||||| | ||||| || ||||||||       |||||||| |||||||| | ||||||||||||||||    
T  24742038 tttcttgtaacccttt-gtaacactttcatcatattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaat 24741944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 37 - 133
Target Start/End: Complemental strand, 29760739 - 29760645
Alignment:
Q  37 tttcttgtaactcttttgtaacactttcatcatagtagattgaagggctgctctnnnnnnnagattaggtcatattggaccgaactgggtcaacaat 133  Q
    ||||||||||| |||| ||||||||||||||||| | ||||| || ||||||||       |||||||| |||||||| | ||||||||||||||||    
T  29760739 tttcttgtaacccttt-gtaacactttcatcatattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaat 29760645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 98 - 148
Target Start/End: Complemental strand, 48893672 - 48893621
Alignment:
Q  98 agattaggtcatattggaccgaactgggtcaacaat-gttggtgtgtttgtt 148  Q
    |||||||||||  |||||||||||||||||||||||  ||||||||||||||    
T  48893672 agattaggtcaagttggaccgaactgggtcaacaatctttggtgtgtttgtt 48893621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 98 - 148
Target Start/End: Complemental strand, 52467388 - 52467337
Alignment:
Q  98 agattaggtcatattggaccgaactgggtcaacaat-gttggtgtgtttgtt 148  Q
    |||||||||||  |||||||||||||||||||||||  ||||||||||||||    
T  52467388 agattaggtcaagttggaccgaactgggtcaacaatctttggtgtgtttgtt 52467337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 217
Target Start/End: Original strand, 8689622 - 8689695
Alignment:
Q  143 tttgttcatgcttgtggtgtttctctacacttagatctaggcctgtttttgttgttgttgtttgaagacacttta 217  Q
    |||||| |||||||||||||| |||| || | || |||||| |||||||||||||||||  ||| ||||||||||    
T  8689622 tttgtttatgcttgtggtgttgctctgcattaag-tctaggtctgtttttgttgttgttacttggagacacttta 8689695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 100 - 149
Target Start/End: Complemental strand, 12743957 - 12743907
Alignment:
Q  100 attaggtcatattggaccgaactgggtcaacaat-gttggtgtgtttgttc 149  Q
    |||||||||  |||||||||||||||||||||||  |||||||||||||||    
T  12743957 attaggtcaagttggaccgaactgggtcaacaatctttggtgtgtttgttc 12743907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 100 - 149
Target Start/End: Complemental strand, 12745346 - 12745296
Alignment:
Q  100 attaggtcatattggaccgaactgggtcaacaat-gttggtgtgtttgttc 149  Q
    |||||||||  |||||||||||||||||||||||  |||||||||||||||    
T  12745346 attaggtcaagttggaccgaactgggtcaacaatctttggtgtgtttgttc 12745296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 100 - 149
Target Start/End: Original strand, 29254630 - 29254680
Alignment:
Q  100 attaggtcatattggaccgaactgggtcaacaat-gttggtgtgtttgttc 149  Q
    |||||||||  |||||||||||||||||||||||  |||||||||||||||    
T  29254630 attaggtcaagttggaccgaactgggtcaacaatctttggtgtgtttgttc 29254680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 38 - 148
Target Start/End: Original strand, 34495822 - 34495931
Alignment:
Q  38 ttcttgtaactcttttgtaacactttcatcatagtagattgaagggctgctctnnnnnnnagattaggtcatattggaccgaactgggtcaacaatgttg 137  Q
    |||||||||| | |||||| |||||||||| |||| ||||| |||||||||||       ||| || ||||| |||||||||||| |||  || || |||    
T  34495822 ttcttgtaacccatttgtatcactttcatcttagtggattggagggctgctctctcccccagagtaagtcatgttggaccgaactaggt-taccatcttg 34495920  T
Q  138 gtgtgtttgtt 148  Q
    |||||||||||    
T  34495921 gtgtgtttgtt 34495931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 111 - 148
Target Start/End: Original strand, 36994671 - 36994708
Alignment:
Q  111 ttggaccgaactgggtcaacaatgttggtgtgtttgtt 148  Q
    ||||||||||||||||||||||| |||| |||||||||    
T  36994671 ttggaccgaactgggtcaacaattttggcgtgtttgtt 36994708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 100 - 148
Target Start/End: Complemental strand, 46147423 - 46147374
Alignment:
Q  100 attaggtcatattggaccgaactgggtcaacaat-gttggtgtgtttgtt 148  Q
    |||||||||  |||||||||||||||||||||||  ||||||||||||||    
T  46147423 attaggtcaagttggaccgaactgggtcaacaatctttggtgtgtttgtt 46147374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 98 - 149
Target Start/End: Complemental strand, 9927492 - 9927440
Alignment:
Q  98 agattaggtcatattggaccgaactgggtcaacaat-gttggtgtgtttgttc 149  Q
    |||||||||||  ||||||||||||| |||||||||  |||||||||||||||    
T  9927492 agattaggtcaagttggaccgaactgagtcaacaatctttggtgtgtttgttc 9927440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 97; Significance: 9e-48; HSPs: 63)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 16 - 242
Target Start/End: Original strand, 14698985 - 14699235
Alignment:
Q  16 ttgtgtaagcttttaagctaatttcttgtaactcttttgtaacactttcatcatagtagattgaagggctgctctnnnnnnnagattaggtcatattgga 115  Q
    |||||||||||| |||||||||||||||||||||||||||||| ||||||||||||| ||||| |||||||||||       ||||||||||||||||||    
T  14698985 ttgtgtaagcttataagctaatttcttgtaactcttttgtaac-ctttcatcatagtggattggagggctgctctctcccccagattaggtcatattgga 14699083  T
Q  116 ccgaactgggtcaacaatgttggtgtgtttgttc---------------------atgcttgtggtgtttctctacacttagatctaggcctg-tttttg 193  Q
    |||||||||||||||||| |||||||||||||||                     |||||||||||||| |||||||||||||| |||| ||| ||||||    
T  14699084 ccgaactgggtcaacaatcttggtgtgtttgttcctttctttcattgctttgattatgcttgtggtgttgctctacacttagatttaggtctgctttttg 14699183  T
Q  194 ttgttgttgt---ttgaagacactttatccattgattaccacttcctttgct 242  Q
    ||||||||||   ||| |||||||||||| ||||||||||||||||||||||    
T  14699184 ttgttgttgttgcttggagacactttatctattgattaccacttcctttgct 14699235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 16 - 145
Target Start/End: Complemental strand, 13569448 - 13569319
Alignment:
Q  16 ttgtgtaagcttttaagctaatttcttgtaactcttttgtaacactttcatcatagtagattgaagggctgctctnnnnnnnagattaggtcatattgga 115  Q
    |||||||| ||| |||||||||||||||||||||||||||||||||||||||||||| ||||| || ||||||||       ||||||||||||||||||    
T  13569448 ttgtgtaaacttataagctaatttcttgtaactcttttgtaacactttcatcatagtggattggagagctgctctctcccccagattaggtcatattgga 13569349  T
Q  116 ccgaactgggtcaacaatgttggtgtgttt 145  Q
    |||||||||||||||||| |||||||||||    
T  13569348 ccgaactgggtcaacaattttggtgtgttt 13569319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 19 - 149
Target Start/End: Complemental strand, 20522337 - 20522207
Alignment:
Q  19 tgtaagcttttaagctaatttcttgtaactcttttgtaacactttcatcatagtagattgaagggctgctctnnnnnnnagattaggtcatattggaccg 118  Q
    ||||||||| ||| ||||||||||||||| |||||||||||||||||||||||| ||||| |||| ||||||       |||||||||||||||||||||    
T  20522337 tgtaagcttataatctaatttcttgtaacccttttgtaacactttcatcatagtggattggagggttgctctctcccccagattaggtcatattggaccg 20522238  T
Q  119 aactgggtcaacaatgttggtgtgtttgttc 149  Q
    ||||||||||||||| |||||||||||||||    
T  20522237 aactgggtcaacaatcttggtgtgtttgttc 20522207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 23 - 149
Target Start/End: Original strand, 33528605 - 33528731
Alignment:
Q  23 agcttttaagctaatttcttgtaactcttttgtaacactttcatcatagtagattgaagggctgctctnnnnnnnagattaggtcatattggaccgaact 122  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||| ||||| |||| ||||||       | |||||||||||||||||||||||    
T  33528605 agcttataagctaatttcttgtaactcttttgtaacactttcatcatagtggattggagggttgctctctttcccatattaggtcatattggaccgaact 33528704  T
Q  123 gggtcaacaatgttggtgtgtttgttc 149  Q
    ||||||||||| |||||||||||||||    
T  33528705 gggtcaacaatcttggtgtgtttgttc 33528731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 16 - 149
Target Start/End: Original strand, 10445421 - 10445554
Alignment:
Q  16 ttgtgtaagcttttaagctaatttcttgtaactcttttgtaacactttcatcatagtagattgaagggctgctctnnnnnnnagattaggtcatattgga 115  Q
    ||||||||| || |||||||||||||||||||||||||||||||||||||| ||||| ||||| || ||||||||       ||||||||||||||||||    
T  10445421 ttgtgtaagattgtaagctaatttcttgtaactcttttgtaacactttcataatagtggattggagagctgctctctcccccagattaggtcatattgga 10445520  T
Q  116 ccgaactgggtcaacaatgttggtgtgtttgttc 149  Q
    ||||||||| |||||||| |||||||||||||||    
T  10445521 ccgaactggatcaacaatcttggtgtgtttgttc 10445554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 16 - 149
Target Start/End: Complemental strand, 17865323 - 17865190
Alignment:
Q  16 ttgtgtaagcttttaagctaatttcttgtaactcttttgtaacactttcatcatagtagattgaagggctgctctnnnnnnnagattaggtcatattgga 115  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||| |||| ||||||       ||||||||||||||| ||    
T  17865323 ttgtgtaagcttataagctaatttcttgtaactcttttgtaacactttcatcatagtggattggagggttgctctctcccccagattaggtcatattcga 17865224  T
Q  116 ccgaactgggtcaacaatgttggtgtgtttgttc 149  Q
    | |||||||||||||||| |||||||| ||||||    
T  17865223 ctgaactgggtcaacaatcttggtgtgattgttc 17865190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 16 - 149
Target Start/End: Original strand, 34682311 - 34682444
Alignment:
Q  16 ttgtgtaagcttttaagctaatttcttgtaactcttttgtaacactttcatcatagtagattgaagggctgctctnnnnnnnagattaggtcatattgga 115  Q
    |||||||||| | |||||||||||||||||||||||||||||||||||||| ||||| ||||| || ||||||||       |||||| |||||||||||    
T  34682311 ttgtgtaagcctgtaagctaatttcttgtaactcttttgtaacactttcattatagtggattggagagctgctctctcccccagattatgtcatattgga 34682410  T
Q  116 ccgaactgggtcaacaatgttggtgtgtttgttc 149  Q
    |||||||||||||||||| |||||||||||||||    
T  34682411 ccgaactgggtcaacaatcttggtgtgtttgttc 34682444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 16 - 149
Target Start/End: Complemental strand, 39483051 - 39482918
Alignment:
Q  16 ttgtgtaagcttttaagctaatttcttgtaactcttttgtaacactttcatcatagtagattgaagggctgctctnnnnnnnagattaggtcatattgga 115  Q
    |||||||||||| ||||||||||||||||||||||||||||||| |||||||||||| ||||| ||| |||||||       | ||||||||||||||||    
T  39483051 ttgtgtaagcttataagctaatttcttgtaactcttttgtaacattttcatcatagtggattggaggcctgctctctcccccatattaggtcatattgga 39482952  T
Q  116 ccgaactgggtcaacaatgttggtgtgtttgttc 149  Q
    ||||||| |||||||||| |||||||||||||||    
T  39482951 ccgaactaggtcaacaatcttggtgtgtttgttc 39482918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 16 - 149
Target Start/End: Complemental strand, 21630063 - 21629931
Alignment:
Q  16 ttgtgtaagcttttaagctaatttcttgtaactcttttgtaacactttcatcatagtagattgaagggctgctctnnnnnnnagattaggtcatattgga 115  Q
    |||||||||||| ||| |||||||||||||||||||||||||||||||||||||||| ||||| || ||||||||       ||||||||||||||||||    
T  21630063 ttgtgtaagcttataaactaatttcttgtaactcttttgtaacactttcatcatagtggattggagagctgctct-ctccccagattaggtcatattgga 21629965  T
Q  116 ccgaactgggtcaacaatgttggtgtgtttgttc 149  Q
    | |||||||||||||||| |||||||||||||||    
T  21629964 ctgaactgggtcaacaatcttggtgtgtttgttc 21629931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 16 - 151
Target Start/End: Original strand, 8390127 - 8390262
Alignment:
Q  16 ttgtgtaagcttttaagctaatttcttgtaactcttttgtaacactttcatcatagtagattgaagggctgctctnnnnnnnagattaggtcatattgga 115  Q
    ||||| |||||| ||||||||||||||||||||||||| |||||||||||||||||| ||||| || ||||||||       | |||||||||| |||||    
T  8390127 ttgtgcaagcttgtaagctaatttcttgtaactcttttttaacactttcatcatagtggattggagagctgctctctcccccaaattaggtcattttgga 8390226  T
Q  116 ccgaactgggtcaacaatgttggtgtgtttgttcat 151  Q
    |||||||||||||||||| |||||||||||||||||    
T  8390227 ccgaactgggtcaacaattttggtgtgtttgttcat 8390262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 16 - 149
Target Start/End: Complemental strand, 33118256 - 33118123
Alignment:
Q  16 ttgtgtaagcttttaagctaatttcttgtaactcttttgtaacactttcatcatagtagattgaagggctgctctnnnnnnnagattaggtcatattgga 115  Q
    |||||||||||| |||||||||||||||||||| ||||||||| ||||||||||||| ||||| |||||||||||       | ||||||||||||||||    
T  33118256 ttgtgtaagcttataagctaatttcttgtaactattttgtaactctttcatcatagtggattggagggctgctctctcccccaaattaggtcatattgga 33118157  T
Q  116 ccgaactgggtcaacaatgttggtgtgtttgttc 149  Q
    |||||||| | ||||||| |||||||||||||||    
T  33118156 ccgaactgagccaacaatcttggtgtgtttgttc 33118123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 21 - 149
Target Start/End: Original strand, 16940191 - 16940319
Alignment:
Q  21 taagcttttaagctaatttcttgtaactcttttgtaacactttcatcatagtagattgaagggctgctctnnnnnnnagattaggtcatattggaccgaa 120  Q
    ||||||| |||||||||||||||||| ||||||||||||||||||||||||| ||||| ||||||| |||       |||||| ||||||||||||||||    
T  16940191 taagcttataagctaatttcttgtaattcttttgtaacactttcatcatagtggattggagggctgatctttcccccagattatgtcatattggaccgaa 16940290  T
Q  121 ctgggtcaacaatgttggtgtgtttgttc 149  Q
     |||||||||||| |||||||||||||||    
T  16940291 ttgggtcaacaatcttggtgtgtttgttc 16940319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 21 - 149
Target Start/End: Original strand, 17010856 - 17010984
Alignment:
Q  21 taagcttttaagctaatttcttgtaactcttttgtaacactttcatcatagtagattgaagggctgctctnnnnnnnagattaggtcatattggaccgaa 120  Q
    ||||||| |||||||||||||||||| ||||||||||||||||||||||||| ||||| ||||||| |||       |||||| ||||||||||||||||    
T  17010856 taagcttataagctaatttcttgtaattcttttgtaacactttcatcatagtggattggagggctgatctttcccccagattatgtcatattggaccgaa 17010955  T
Q  121 ctgggtcaacaatgttggtgtgtttgttc 149  Q
     |||||||||||| |||||||||||||||    
T  17010956 ttgggtcaacaatcttggtgtgtttgttc 17010984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 16 - 151
Target Start/End: Original strand, 10707229 - 10707364
Alignment:
Q  16 ttgtgtaagcttttaagctaatttcttgtaactcttttgtaacactttcatcatagtagattgaagggctgctctnnnnnnnagattaggtcatattgga 115  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||| || | || |||       | ||||||||||||||||    
T  10707229 ttgtgtaagcttgtaagctaatttcttgtaactcttttgtaacactttcatcatagtggattggagagttgttctctcccccatattaggtcatattgga 10707328  T
Q  116 ccgaactgggtcaacaatgttggtgtgtttgttcat 151  Q
    |||||||||||||||||| | ||||||||| |||||    
T  10707329 ccgaactgggtcaacaatctcggtgtgtttattcat 10707364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 29 - 149
Target Start/End: Complemental strand, 34388965 - 34388845
Alignment:
Q  29 taagctaatttcttgtaactcttttgtaacactttcatcatagtagattgaagggctgctctnnnnnnnagattaggtcatattggaccgaactgggtca 128  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||| || ||| ||||       ||||||||||||||||||||||| |||||||    
T  34388965 taagctaatttcttgtaactcttttgtaacactttcatcatagtggattggagagctactctctcccccagattaggtcatattggaccgaattgggtca 34388866  T
Q  129 acaatgttggtgtgtttgttc 149  Q
    ||||| | |||||||||||||    
T  34388865 acaatctcggtgtgtttgttc 34388845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 150 - 240
Target Start/End: Complemental strand, 33118088 - 33117998
Alignment:
Q  150 atgcttgtggtgtttctctacacttagatctaggcctgtttttgttgttgttgtttgaagacactttatccattgattaccacttcctttg 240  Q
    |||||||||||||| |||||||||||||| |||| ||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||    
T  33118088 atgcttgtggtgttgctctacacttagatttaggtctgtttttgttgttgatgtttgaagacactttatctattgattaccacttcctttg 33117998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 150 - 239
Target Start/End: Complemental strand, 8040012 - 8039923
Alignment:
Q  150 atgcttgtggtgtttctctacacttagatctaggcctgtttttgttgttgttgtttgaagacactttatccattgattaccacttccttt 239  Q
    |||||||||||||| |||||||||||||| |||| |||||||||||||||||| |||||||||||||||| |||||||||||||||||||    
T  8040012 atgcttgtggtgttgctctacacttagatttaggtctgtttttgttgttgttgcttgaagacactttatctattgattaccacttccttt 8039923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 150 - 242
Target Start/End: Complemental strand, 31055994 - 31055902
Alignment:
Q  150 atgcttgtggtgtttctctacacttagatctaggcctgtttttgttgttgttgtttgaagacactttatccattgattaccacttcctttgct 242  Q
    |||||||||||||| |||||||||||||| |||| |||||||||||||||||| ||| |||||||||||| ||||||||||||||||||||||    
T  31055994 atgcttgtggtgttgctctacacttagatttaggtctgtttttgttgttgttgcttggagacactttatctattgattaccacttcctttgct 31055902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 150 - 242
Target Start/End: Original strand, 33528766 - 33528858
Alignment:
Q  150 atgcttgtggtgtttctctacacttagatctaggcctgtttttgttgttgttgtttgaagacactttatccattgattaccacttcctttgct 242  Q
    |||||||||||||| ||||||| ||||||||||| |||||||||||||||||| |||  ||||||||||||||||||||||||||||||||||    
T  33528766 atgcttgtggtgttgctctacatttagatctaggtctgtttttgttgttgttgcttggggacactttatccattgattaccacttcctttgct 33528858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 16 - 133
Target Start/End: Complemental strand, 8040182 - 8040063
Alignment:
Q  16 ttgtgtaagcttttaagctaatttcttgtaactct--tttgtaacactttcatcatagtagattgaagggctgctctnnnnnnnagattaggtcatattg 113  Q
    |||||||||||| ||||||||||||||||||||||  |||||||||||||||||||||| ||||| || ||||||||       ||||||||||||||||    
T  8040182 ttgtgtaagcttgtaagctaatttcttgtaactctcttttgtaacactttcatcatagtggattggagagctgctctctcccccagattaggtcatattg 8040083  T
Q  114 gaccgaactgggtcaacaat 133  Q
    ||| ||||||||||||||||    
T  8040082 gactgaactgggtcaacaat 8040063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 151 - 242
Target Start/End: Complemental strand, 34388810 - 34388719
Alignment:
Q  151 tgcttgtggtgtttctctacacttagatctaggcctgtttttgttgttgttgtttgaagacactttatccattgattaccacttcctttgct 242  Q
    ||||||||||||| ||||||||||||||||||| |||||||||||||||||| ||||||||||||||   ||||||||||||||||||||||    
T  34388810 tgcttgtggtgttgctctacacttagatctaggtctgtttttgttgttgttgcttgaagacactttacatattgattaccacttcctttgct 34388719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 19 - 149
Target Start/End: Complemental strand, 31056161 - 31056030
Alignment:
Q  19 tgtaagcttttaagctaatttcttgtaactcttttgtaacactttcatcatagtagattgaagggctgctctnnnnnnnagattaggtcatattggaccg 118  Q
    ||||||||| ||||||||||| ||||||||||||||||||||||||||| |||| ||||| || ||||||||       |||||||||||||||| ||||    
T  31056161 tgtaagcttataagctaatttattgtaactcttttgtaacactttcatcttagtggattggagagctgctctctcccctagattaggtcatattgaaccg 31056062  T
Q  119 aactgggtcaacaat-gttggtgtgtttgttc 149  Q
    |||| ||||||||||  |||||||||||||||    
T  31056061 aactaggtcaacaatctttggtgtgtttgttc 31056030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 23 - 149
Target Start/End: Original strand, 2869677 - 2869803
Alignment:
Q  23 agcttttaagctaatttcttgtaactcttttgtaacactttcatcatagtagattgaagggctgctctnnnnnnnagattaggtcatattggaccgaact 122  Q
    ||||||||||||||||||||||||||| |||||| |||||||||| |||| ||||| || ||| ||||       ||| |||||||||||||||||||||    
T  2869677 agcttttaagctaatttcttgtaactcctttgtatcactttcatcttagtggattggagagctactctctcccctagagtaggtcatattggaccgaact 2869776  T
Q  123 gggtcaacaatgttggtgtgtttgttc 149  Q
    |||| |||||| |||||||||||||||    
T  2869777 gggtaaacaatattggtgtgtttgttc 2869803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 150 - 239
Target Start/End: Complemental strand, 17865155 - 17865066
Alignment:
Q  150 atgcttgtggtgtttctctacacttagatctaggcctgtttttgttgttgttgtttgaagacactttatccattgattaccacttccttt 239  Q
    |||||||||||||| |||||||||||||||||||  ||||||||||||||||| ||| ||||| ||||||||||||||||||||||||||    
T  17865155 atgcttgtggtgttgctctacacttagatctaggtatgtttttgttgttgttggttggagacattttatccattgattaccacttccttt 17865066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 150 - 239
Target Start/End: Complemental strand, 13569281 - 13569191
Alignment:
Q  150 atgcttgtggtgtttctctacacttagatctaggcctgttttt-gttgttgttgtttgaagacactttatccattgattaccacttccttt 239  Q
    |||||||||||||||||||| ||||||||||| |||||||||| |||||||||||||| ||||||||||  ||||||||||||||||||||    
T  13569281 atgcttgtggtgtttctctatacttagatctaagcctgttttttgttgttgttgtttggagacactttacacattgattaccacttccttt 13569191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 16 - 148
Target Start/End: Original strand, 28259155 - 28259288
Alignment:
Q  16 ttgtgtaagcttttaagctaatttcttgtaactcttttgtaacactttcatcatagtagattgaagggctgctctnnnnnnnagattaggtcatattgga 115  Q
    ||||||||||||  |||||| |||||||||||||||| ||||||||||||||||||| ||||| || ||||||||       | ||||||||||||||||    
T  28259155 ttgtgtaagcttgcaagctattttcttgtaactcttt-gtaacactttcatcatagtggattggagagctgctctctcccccaaattaggtcatattgga 28259253  T
Q  116 ccgaactgggtcaacaa--tgttggtgtgtttgtt 148  Q
    |||||||||||||||||  | ||||||||||||||    
T  28259254 ccgaactgggtcaacaatcttttggtgtgtttgtt 28259288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 141 - 239
Target Start/End: Original strand, 34682470 - 34682568
Alignment:
Q  141 tgtttgttcatgcttgtggtgtttctctacacttagatctaggcctgtttttgttgttgttgtttgaagacactttatccattgattaccacttccttt 239  Q
    |||||| | |||||||||||||| |||||||||||||| |||| |||||||||||||||||| ||| |||||||||||| |||||||||||||| ||||    
T  34682470 tgtttgattatgcttgtggtgttgctctacacttagatttaggtctgtttttgttgttgttgcttggagacactttatctattgattaccactttcttt 34682568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 150 - 239
Target Start/End: Complemental strand, 20522172 - 20522083
Alignment:
Q  150 atgcttgtggtgtttctctacacttagatctaggcctgtttttgttgttgttgtttgaagacactttatccattgattaccacttccttt 239  Q
    |||||||||||||| ||||||||||||||||| | || ||||||||||| ||| ||| ||||||||||||||||||||||||||||||||    
T  20522172 atgcttgtggtgttgctctacacttagatctatgtctttttttgttgtttttgcttggagacactttatccattgattaccacttccttt 20522083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 143 - 242
Target Start/End: Original strand, 42039808 - 42039906
Alignment:
Q  143 tttgttcatgcttgtggtgtttctctacacttagatctaggcctgtttttgttgttgttgtttgaagacactttatccattgattaccacttcctttgct 242  Q
    |||||| |||||||||||||| ||||||||||| |||||||  ||||||||||||||||| ||| ||||||||||  |||||||||||||||||||||||    
T  42039808 tttgtttatgcttgtggtgttgctctacactta-atctaggtatgtttttgttgttgttgcttggagacactttacacattgattaccacttcctttgct 42039906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 150 - 239
Target Start/End: Original strand, 10445589 - 10445679
Alignment:
Q  150 atgcttgtggtgtttctctacacttagatctaggcctgtttt-tgttgttgttgtttgaagacactttatccattgattaccacttccttt 239  Q
    ||||||||||| || |||||||||||||| |||| ||||||| ||||||||||| ||| ||||||||||||||||||||||||||||||||    
T  10445589 atgcttgtggttttgctctacacttagatttaggtctgttttttgttgttgttgcttggagacactttatccattgattaccacttccttt 10445679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 150 - 242
Target Start/End: Original strand, 23078616 - 23078709
Alignment:
Q  150 atgcttgtggtgtttctctacacttagatctaggcctgtttt-tgttgttgttgtttgaagacactttatccattgattaccacttcctttgct 242  Q
    |||||||||||||| |||||||||||||||||||  |||||| ||||||||||| ||| ||||||||||  |||||||||||||||||||||||    
T  23078616 atgcttgtggtgttgctctacacttagatctaggtatgttttttgttgttgttgcttggagacactttacacattgattaccacttcctttgct 23078709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 150 - 239
Target Start/End: Original strand, 8390294 - 8390387
Alignment:
Q  150 atgcttgtggtgtttctctacacttagatctaggcctgttttt----gttgttgttgtttgaagacactttatccattgattaccacttccttt 239  Q
    |||||||||||||| ||||||||||||||||||| ||| ||||    |||||||||||||| | ||||||||||||||||||||||||||||||    
T  8390294 atgcttgtggtgttgctctacacttagatctaggtctggtttttgttgttgttgttgtttggatacactttatccattgattaccacttccttt 8390387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 154 - 242
Target Start/End: Complemental strand, 21629897 - 21629810
Alignment:
Q  154 ttgtggtgtttctctacacttagatctaggcctgtttttgttgttgttgtttgaagacactttatccattgattaccacttcctttgct 242  Q
    |||||||| | ||||||||||||||||||| ||||||| |||||||||| ||| |||||||||||| ||||||||||||||||||||||    
T  21629897 ttgtggtgctgctctacacttagatctaggtctgtttt-gttgttgttgcttggagacactttatctattgattaccacttcctttgct 21629810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 150 - 242
Target Start/End: Original strand, 16940354 - 16940446
Alignment:
Q  150 atgcttgtggtgtttctctacacttagatctaggcctgtttttgttgttgttgtttgaagacactttatccattgattaccacttcctttgct 242  Q
    |||||| ||||||  |||| |||||||||||||| ||||||||||||||||||  |  ||||||||||| |||||||||||||||||||||||    
T  16940354 atgcttttggtgtcgctctgcacttagatctaggtctgtttttgttgttgttgcatagagacactttattcattgattaccacttcctttgct 16940446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 150 - 242
Target Start/End: Original strand, 17011019 - 17011111
Alignment:
Q  150 atgcttgtggtgtttctctacacttagatctaggcctgtttttgttgttgttgtttgaagacactttatccattgattaccacttcctttgct 242  Q
    |||||| ||||||  |||| |||||||||||||| ||||||||||||||||||  |  ||||||||||| |||||||||||||||||||||||    
T  17011019 atgcttttggtgtcgctctgcacttagatctaggtctgtttttgttgttgttgcatagagacactttattcattgattaccacttcctttgct 17011111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 143 - 242
Target Start/End: Original strand, 36757901 - 36757998
Alignment:
Q  143 tttgttcatgcttgtggtgtttctctacacttagatctaggcctgtttttgttgttgttgtttgaagacactttatccattgattaccacttcctttgct 242  Q
    |||||| |||||||||||||| ||||||||| || |||||| ||||||| |||||||||| ||| ||||||||||  |||||||||||||||||||||||    
T  36757901 tttgtttatgcttgtggtgttgctctacactaag-tctaggtctgtttt-gttgttgttgcttggagacactttacacattgattaccacttcctttgct 36757998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 15 - 133
Target Start/End: Original strand, 42039645 - 42039763
Alignment:
Q  15 tttgtgtaagcttttaagctaattt-cttgtaactcttttgtaacactttcatcatagtagattgaagggctgctctnnnnnnnagattaggtcatattg 113  Q
    |||||||||||||  |||||||||| ||||||||||||  ||||||||||||||||||| ||||  || ||||||||       ||||||||||||||||    
T  42039645 tttgtgtaagcttgcaagctaattttcttgtaactcttc-gtaacactttcatcatagtggattagagagctgctctctcccacagattaggtcatattg 42039743  T
Q  114 gaccgaactgggtcaacaat 133  Q
    ||||||||| | ||||||||    
T  42039744 gaccgaactagatcaacaat 42039763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 151 - 239
Target Start/End: Complemental strand, 3491702 - 3491616
Alignment:
Q  151 tgcttgtggtgtttctctacacttagatctaggcctgtttttgttgttgttgtttgaagacactttatccattgattaccacttccttt 239  Q
    ||||||||||||| ||||||||| ||| ||||| |||||||||||||||||| ||| ||||||||||  ||| ||||||||||||||||    
T  3491702 tgcttgtggtgttgctctacact-aga-ctagggctgtttttgttgttgttgcttggagacactttacacatagattaccacttccttt 3491616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 16 - 149
Target Start/End: Original strand, 23078448 - 23078582
Alignment:
Q  16 ttgtgtaagcttttaagctaatttcttgtaactcttttgtaacactttcatcatagtagattgaagggctgctctnnnnnnnagattaggtcatattgga 115  Q
    ||||||||||||  |||||| ||||||||||||| ||| |||||||||||||||||| ||||| || | || |||       | ||||||||||||||||    
T  23078448 ttgtgtaagcttgcaagctattttcttgtaactc-tttctaacactttcatcatagtggattggagagttgttctctcccccatattaggtcatattgga 23078546  T
Q  116 ccgaactgggtcaaca--atgttggtgtgtttgttc 149  Q
     |||||||||||||||   | |||||||||||||||    
T  23078547 tcgaactgggtcaacattcttttggtgtgtttgttc 23078582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 150 - 224
Target Start/End: Complemental strand, 39482883 - 39482808
Alignment:
Q  150 atgcttgtggtgtttctctacacttagatctaggcctgttttt-gttgttgttgtttgaagacactttatccattg 224  Q
    ||||||||||||||  ||||||||||||| |||| |||||||| |||||||||||||| |||||||||||| ||||    
T  39482883 atgcttgtggtgttgttctacacttagatttaggtctgttttttgttgttgttgtttggagacactttatctattg 39482808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 16 - 149
Target Start/End: Complemental strand, 25398615 - 25398480
Alignment:
Q  16 ttgtgtaagcttttaagctaattt-cttgtaactcttttgtaacactttcatcatagtagattgaagggctgctctnnnnnnnagattaggtcatattgg 114  Q
    ||||||||||||  |||||| ||| |||||||| |||| ||||||||||||||||||| ||||| || ||||||||       |||||||||||||||||    
T  25398615 ttgtgtaagcttgcaagctatttttcttgtaacccttt-gtaacactttcatcatagtggattggagagctgctctctcccccagattaggtcatattgg 25398517  T
Q  115 accgaactgggtcaacaa---tgttggtgtgtttgttc 149  Q
     | |||||||||||||||   | |||||||||||||||    
T  25398516 -ctgaactgggtcaacaatctttttggtgtgtttgttc 25398480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 16 - 149
Target Start/End: Complemental strand, 3491870 - 3491736
Alignment:
Q  16 ttgtgtaagcttttaagctaattt-cttgtaactcttttgtaacactttcatcatagtagattgaagggctgctctnnnnnnnagattaggtcatattgg 114  Q
    ||||||||||||  |||||| ||| |||||||| |||| ||||||||||||||||||| ||||| || ||||||||       |||||||| ||||||||    
T  3491870 ttgtgtaagcttgcaagctatttttcttgtaacccttt-gtaacactttcatcatagtggattggagagctgctctctcccccagattaggccatattgg 3491772  T
Q  115 accgaactgggtcaacaa--tgttggtgtgtttgttc 149  Q
     | |||||||||||||||  | |||||||||||||||    
T  3491771 -ctgaactgggtcaacaatcttttggtgtgtttgttc 3491736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 155 - 239
Target Start/End: Complemental strand, 25398440 - 25398358
Alignment:
Q  155 tgtggtgtttctctacacttagatctaggcctgtttttgttgttgttgtttgaagacactttatccattgattaccacttccttt 239  Q
    ||||||||| ||||||||| || |||||| |||||||||||||||||| ||| ||||||||||  ||| ||||||||||||||||    
T  25398440 tgtggtgttgctctacact-ag-tctagggctgtttttgttgttgttgcttggagacactttacacatagattaccacttccttt 25398358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 155 - 239
Target Start/End: Complemental strand, 25403578 - 25403496
Alignment:
Q  155 tgtggtgtttctctacacttagatctaggcctgtttttgttgttgttgtttgaagacactttatccattgattaccacttccttt 239  Q
    ||||||||| ||||||||| || |||||| |||||||||||||||||| ||| ||||||||||  ||| ||||||||||||||||    
T  25403578 tgtggtgttgctctacact-ag-tctagggctgtttttgttgttgttgcttggagacactttacacatagattaccacttccttt 25403496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 33 - 133
Target Start/End: Original strand, 2838024 - 2838124
Alignment:
Q  33 ctaatttcttgtaactcttttgtaacactttcatcatagtagattgaagggctgctctnnnnnnnagattaggtcatattggaccgaactgggtcaacaa 132  Q
    ||||||||||||||||| |||||| |||||||||  |||| ||||| ||   ||||||       ||| |||||||||||||||||||||||||||||||    
T  2838024 ctaatttcttgtaactcatttgtatcactttcattttagtggattggagatgtgctctctcccccagagtaggtcatattggaccgaactgggtcaacaa 2838123  T
Q  133 t 133  Q
    |    
T  2838124 t 2838124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 150 - 242
Target Start/End: Original strand, 10707396 - 10707490
Alignment:
Q  150 atgcttgtggtgtttctctacacttagatctaggcctgtttt--tgttgttgttgtttgaagacactttatccattgattaccacttcctttgct 242  Q
    |||||||  ||||| |||||||||||||||||||  | ||||  ||||||||||| ||| ||||||||||  |||||||||||||||| ||||||    
T  10707396 atgcttgcagtgttgctctacacttagatctaggtatattttcttgttgttgttgcttggagacactttacacattgattaccacttcttttgct 10707490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 16 - 149
Target Start/End: Original strand, 36757740 - 36757874
Alignment:
Q  16 ttgtgtaagcttttaagctaatttcttgtaactcttttgtaacactttcatcatagtagattgaagggctgctctnnnnnnnagattaggtcatattgga 115  Q
    ||||||||||||  |||||  |||||| ||||||||| | ||||||||||||||| | ||||| || |||| | |       ||||||||||||||||||    
T  36757740 ttgtgtaagcttgaaagcttttttcttataactcttt-gaaacactttcatcatactggattggagagctgttatcccccccagattaggtcatattgga 36757838  T
Q  116 ccgaactgggtcaacaa--tgttggtgtgtttgttc 149  Q
    ||||| |||||||||||  | |||||||||||||||    
T  36757839 ccgaattgggtcaacaatcttttggtgtgtttgttc 36757874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 16 - 149
Target Start/End: Complemental strand, 25403753 - 25403618
Alignment:
Q  16 ttgtgtaagcttttaagctaattt-cttgtaactcttttgtaacactttcatcatagtagattgaagggctgctctnnnnnnnagattaggtcatattgg 114  Q
    ||||||||||||  |||||| ||| |||||||| |||| ||||||||||||||||||| ||||| || ||||||||       |||||||||||||||||    
T  25403753 ttgtgtaagcttgcaagctatttttcttgtaacccttt-gtaacactttcatcatagtggattggagagctgctctctcccccagattaggtcatattgg 25403655  T
Q  115 accgaactgggtcaacaa---tgttggtgtgtttgttc 149  Q
     | |||||| ||||||||   | |||||||||||||||    
T  25403654 -ctgaactgagtcaacaatctttttggtgtgtttgttc 25403618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 32 - 148
Target Start/End: Original strand, 1345533 - 1345652
Alignment:
Q  32 gctaatttcttgtaactcttttgtaacactttcatcata-gtagattgaagggctgctctnnnnnnnagattaggtcatattggaccgaactgggtcaac 130  Q
    |||||||||||| ||||| |||||| |||||||||| || || ||| | || | ||||||       ||| |||||||||||||||||||||||||||||    
T  1345533 gctaatttcttgcaactcatttgtatcactttcatcttaagtggatcggagaggtgctctctcccccagagtaggtcatattggaccgaactgggtcaac 1345632  T
Q  131 aa--tgttggtgtgtttgtt 148  Q
    ||  | ||||||||||||||    
T  1345633 aatttcttggtgtgtttgtt 1345652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 150 - 242
Target Start/End: Complemental strand, 40014879 - 40014788
Alignment:
Q  150 atgcttgtggtgtttctctacacttagatctaggcctgttt-ttgttgttgttgtttgaagacactttatccattgattaccacttcctttgct 242  Q
    |||||||||||| |  | ||||||||| | |||| |||||| |||||||||||| |||| ||||||||  ||||||||||| ||||||||||||    
T  40014879 atgcttgtggtgatgttttacacttagttttaggactgtttgttgttgttgttgcttgaggacacttt--ccattgattactacttcctttgct 40014788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 98 - 148
Target Start/End: Complemental strand, 723778 - 723727
Alignment:
Q  98 agattaggtcatattggaccgaactgggtcaacaat-gttggtgtgtttgtt 148  Q
    |||||||||||  |||||||||||||||||||||||  ||||||||||||||    
T  723778 agattaggtcaagttggaccgaactgggtcaacaatctttggtgtgtttgtt 723727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 150 - 242
Target Start/End: Original strand, 2869839 - 2869935
Alignment:
Q  150 atgcttgtggtgtttctctacacttagatctaggcctgttt----ttgttgttgttgtttgaagacactttatccattgattaccacttcctttgct 242  Q
    |||||| ||||||| |||||||||||||| |||| || |||    ||||||||||||||||| |  ||||||  ||||||| || ||||||||||||    
T  2869839 atgcttatggtgttgctctacacttagatttaggtctatttgttgttgttgttgttgtttgatgctactttactcattgatcactacttcctttgct 2869935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 37 - 133
Target Start/End: Original strand, 11098926 - 11099020
Alignment:
Q  37 tttcttgtaactcttttgtaacactttcatcatagtagattgaagggctgctctnnnnnnnagattaggtcatattggaccgaactgggtcaacaat 133  Q
    ||||||||||| |||| ||||||||||||||||| | ||||| || ||||||||       |||||||| |||||||| | ||||||||||||||||    
T  11098926 tttcttgtaacccttt-gtaacactttcatcatattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaat 11099020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 98 - 148
Target Start/End: Complemental strand, 11151625 - 11151574
Alignment:
Q  98 agattaggtcatattggaccgaactgggtcaacaat-gttggtgtgtttgtt 148  Q
    |||||||||||  |||||||||||||||||||||||  ||||||||||||||    
T  11151625 agattaggtcaagttggaccgaactgggtcaacaatctttggtgtgtttgtt 11151574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 37 - 133
Target Start/End: Complemental strand, 14291586 - 14291492
Alignment:
Q  37 tttcttgtaactcttttgtaacactttcatcatagtagattgaagggctgctctnnnnnnnagattaggtcatattggaccgaactgggtcaacaat 133  Q
    ||||||||||| |||| ||||||||||||||||| | ||||| || ||||||||       |||||||| |||||||| | ||||||||||||||||    
T  14291586 tttcttgtaacccttt-gtaacactttcatcatattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaat 14291492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 90
Target Start/End: Complemental strand, 25407742 - 25407668
Alignment:
Q  16 ttgtgtaagcttttaagctaattt-cttgtaactcttttgtaacactttcatcatagtagattgaagggctgctct 90  Q
    ||||||||||||  |||||| ||| |||||||| |||| ||||||||||||||||||| ||||| || ||||||||    
T  25407742 ttgtgtaagcttgcaagctatttttcttgtaacccttt-gtaacactttcatcatagtggattggagagctgctct 25407668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 90
Target Start/End: Original strand, 27149278 - 27149345
Alignment:
Q  23 agcttttaagctaatttcttgtaactcttttgtaacactttcatcatagtagattgaagggctgctct 90  Q
    |||||||||| ||||||||||| || | |||||| ||||||||| ||||| ||||| || ||||||||    
T  27149278 agcttttaaggtaatttcttgttacccctttgtatcactttcattatagtggattggagagctgctct 27149345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 150 - 242
Target Start/End: Original strand, 28259322 - 28259414
Alignment:
Q  150 atgcttgtggtgtttctctacacttagatctaggcctgttttt--gttgttgttgtttgaagacactttatccattgattaccacttcctttgct 242  Q
    |||||||||||||| ||||||||| ||| ||||| ||||||||  ||| |||||| ||| ||||||||||  |||||||||  ||||||||||||    
T  28259322 atgcttgtggtgttgctctacact-aga-ctaggtctgtttttttgttattgttgcttggagacactttacacattgattattacttcctttgct 28259414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 98 - 148
Target Start/End: Complemental strand, 34139804 - 34139753
Alignment:
Q  98 agattaggtcatattggaccgaactgggtcaacaat-gttggtgtgtttgtt 148  Q
    |||||||||||  |||||||||||||||||||||||  ||||||||||||||    
T  34139804 agattaggtcaagttggaccgaactgggtcaacaatctttggtgtgtttgtt 34139753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 30 - 63
Target Start/End: Complemental strand, 17490261 - 17490228
Alignment:
Q  30 aagctaatttcttgtaactcttttgtaacacttt 63  Q
    ||||||||||||||||||||||||||||| ||||    
T  17490261 aagctaatttcttgtaactcttttgtaactcttt 17490228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 26 - 83
Target Start/End: Complemental strand, 40015035 - 40014978
Alignment:
Q  26 ttttaagctaatttcttgtaactcttttgtaacactttcatcatagtagattgaaggg 83  Q
    |||||||||||||||| | ||||| |||||| |||||||||| |||| ||||| ||||    
T  40015035 ttttaagctaatttctcgcaactcatttgtatcactttcatcttagtggattggaggg 40014978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 102 - 149
Target Start/End: Complemental strand, 17057399 - 17057351
Alignment:
Q  102 taggtcatattggaccgaactgggtcaacaat-gttggtgtgtttgttc 149  Q
    |||||||  |||||||||||||||||||||||  |||||||||||||||    
T  17057399 taggtcaagttggaccgaactgggtcaacaatctttggtgtgtttgttc 17057351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 102 - 149
Target Start/End: Complemental strand, 17085382 - 17085334
Alignment:
Q  102 taggtcatattggaccgaactgggtcaacaat-gttggtgtgtttgttc 149  Q
    |||||||  |||||||||||||||||||||||  |||||||||||||||    
T  17085382 taggtcaagttggaccgaactgggtcaacaatctttggtgtgtttgttc 17085334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 97; Significance: 9e-48; HSPs: 52)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 16 - 149
Target Start/End: Complemental strand, 13598518 - 13598385
Alignment:
Q  16 ttgtgtaagcttttaagctaatttcttgtaactcttttgtaacactttcatcatagtagattgaagggctgctctnnnnnnnagattaggtcatattgga 115  Q
    |||||||||||| ||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||       ||||||||||||||||||    
T  13598518 ttgtgtaagcttataagctaatttcttgtatctcttttgtaacactttcatcatagtggattgaagggctgctctctcccccagattaggtcatattgga 13598419  T
Q  116 ccgaactgggtcaacaatgttggtgtgtttgttc 149  Q
    |||||||||||||||||| |||||||||||||||    
T  13598418 ccgaactgggtcaacaatcttggtgtgtttgttc 13598385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 19 - 149
Target Start/End: Original strand, 16124496 - 16124626
Alignment:
Q  19 tgtaagcttttaagctaatttcttgtaactcttttgtaacactttcatcatagtagattgaagggctgctctnnnnnnnagattaggtcatattggaccg 118  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||       |||||||||||||||||||||    
T  16124496 tgtaagcttataagctaatttcttgtaactcttttgtaacactttcatcatagtggattggagggctgctctctcccccagattaggtcatattggaccg 16124595  T
Q  119 aactgggtcaacaatgttggtgtgtttgttc 149  Q
    ||||| ||||||||| |||||||||||||||    
T  16124596 aactgagtcaacaatcttggtgtgtttgttc 16124626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 16 - 149
Target Start/End: Complemental strand, 9476381 - 9476248
Alignment:
Q  16 ttgtgtaagcttttaagctaatttcttgtaactcttttgtaacactttcatcatagtagattgaagggctgctctnnnnnnnagattaggtcatattgga 115  Q
    |||||||||||| |||||||||||||| |||||||||||||| |||||||||||||| ||||| || ||||||||       ||||||||||||||||||    
T  9476381 ttgtgtaagcttgtaagctaatttcttataactcttttgtaatactttcatcatagtggattggagagctgctctctcccctagattaggtcatattgga 9476282  T
Q  116 ccgaactgggtcaacaatgttggtgtgtttgttc 149  Q
    |||||||||||||||||| |||||||||||||||    
T  9476281 ccgaactgggtcaacaatcttggtgtgtttgttc 9476248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 16 - 145
Target Start/End: Original strand, 47703913 - 47704042
Alignment:
Q  16 ttgtgtaagcttttaagctaatttcttgtaactcttttgtaacactttcatcatagtagattgaagggctgctctnnnnnnnagattaggtcatattgga 115  Q
    |||||||||||| |||||||||||||||||| ||||||||||||||||||||||||| ||||| || ||||||||       ||||||||||||||||||    
T  47703913 ttgtgtaagcttgtaagctaatttcttgtaattcttttgtaacactttcatcatagtggattggagagctgctctctcccccagattaggtcatattgga 47704012  T
Q  116 ccgaactgggtcaacaatgttggtgtgttt 145  Q
    |||||||||||||||||| |||||||||||    
T  47704013 ccgaactgggtcaacaatcttggtgtgttt 47704042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 16 - 149
Target Start/End: Complemental strand, 29651931 - 29651798
Alignment:
Q  16 ttgtgtaagcttttaagctaatttcttgtaactcttttgtaacactttcatcatagtagattgaagggctgctctnnnnnnnagattaggtcatattgga 115  Q
    |||||||||||| |||| ||||||||||||| ||||||||||||||||||||||||| ||||| || ||||||||       ||||||||||||||||||    
T  29651931 ttgtgtaagcttataagttaatttcttgtaattcttttgtaacactttcatcatagtggattggagtgctgctctctcccccagattaggtcatattgga 29651832  T
Q  116 ccgaactgggtcaacaatgttggtgtgtttgttc 149  Q
    |||||||||||||| ||| |||||||||||||||    
T  29651831 ccgaactgggtcaaaaatcttggtgtgtttgttc 29651798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 19 - 149
Target Start/End: Complemental strand, 19073045 - 19072914
Alignment:
Q  19 tgtaagcttttaagctaatttcttgtaactcttttgtaacactttcatcatagtagattgaagggctgctctnnnnnnnagattaggtcatattggaccg 118  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||| |||| ||||| || ||||||||       |||||||||||||||||||||    
T  19073045 tgtaagcttataagctaatttcttgtaactcttttgtaacactttcatcttagtggattggagagctgctctctcccccagattaggtcatattggaccg 19072946  T
Q  119 aactgggtcaacaat-gttggtgtgtttgttc 149  Q
    |||||||||||||||  |||||||||||||||    
T  19072945 aactgggtcaacaatctttggtgtgtttgttc 19072914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 19 - 149
Target Start/End: Complemental strand, 19120935 - 19120804
Alignment:
Q  19 tgtaagcttttaagctaatttcttgtaactcttttgtaacactttcatcatagtagattgaagggctgctctnnnnnnnagattaggtcatattggaccg 118  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||| |||| ||||| || ||||||||       |||||||||||||||||||||    
T  19120935 tgtaagcttataagctaatttcttgtaactcttttgtaacactttcatcttagtggattggagagctgctctctcccccagattaggtcatattggaccg 19120836  T
Q  119 aactgggtcaacaat-gttggtgtgtttgttc 149  Q
    |||||||||||||||  |||||||||||||||    
T  19120835 aactgggtcaacaatctttggtgtgtttgttc 19120804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 29 - 149
Target Start/End: Original strand, 27104362 - 27104482
Alignment:
Q  29 taagctaatttcttgtaactcttttgtaacactttcatcatagtagattgaagggctgctctnnnnnnnagattaggtcatattggaccgaactgggtca 128  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||| || ||||||||       ||||||||| |||||||||||||||| ||||    
T  27104362 taagctaatttcttgtaactcttttgtaacactttcatcatagtggattggagagctgctctctcccccagattaggttatattggaccgaactgtgtca 27104461  T
Q  129 acaatgttggtgtgtttgttc 149  Q
    ||||| |||||||||||||||    
T  27104462 acaatcttggtgtgtttgttc 27104482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 19 - 149
Target Start/End: Original strand, 47098805 - 47098934
Alignment:
Q  19 tgtaagcttttaagctaatttcttgtaactcttttgtaacactttcatcatagtagattgaagggctgctctnnnnnnnagattaggtcatattggaccg 118  Q
    ||||||||| ||||||||||||||||||||| || |||||||||||||| |||| ||||| |||||||||||       ||||| |||||||||||||||    
T  47098805 tgtaagcttataagctaatttcttgtaactcatt-gtaacactttcatcttagtggattggagggctgctctctcccccagattcggtcatattggaccg 47098903  T
Q  119 aactgggtcaacaatgttggtgtgtttgttc 149  Q
    ||||||||||||||| |||||||||||||||    
T  47098904 aactgggtcaacaatcttggtgtgtttgttc 47098934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 150 - 242
Target Start/End: Complemental strand, 775624 - 775532
Alignment:
Q  150 atgcttgtggtgtttctctacacttagatctaggcctgtttttgttgttgttgtttgaagacactttatccattgattaccacttcctttgct 242  Q
    |||||||||||||| |||||||||||||| |||| |||||||||||||||||| ||| |||||||||||| |||| |||||||||||||||||    
T  775624 atgcttgtggtgttgctctacacttagatttaggtctgtttttgttgttgttgcttggagacactttatctattggttaccacttcctttgct 775532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 16 - 149
Target Start/End: Original strand, 26644875 - 26645009
Alignment:
Q  16 ttgtgtaagcttttaagctaatttcttgtaactcttttgtaacactttcatcatagtagattgaagggctgctctnnnnnnnagattaggtcatattgga 115  Q
    ||||||||||||  |||||| |||||||||||||||| ||||||||||||||||| | ||||| || ||||||||       ||||||||||||||||||    
T  26644875 ttgtgtaagcttgcaagctattttcttgtaactcttt-gtaacactttcatcataatggattggagagctgctctctcccccagattaggtcatattgga 26644973  T
Q  116 ccgaactgggtcaacaa--tgttggtgtgtttgttc 149  Q
    |||||||||||||||||  | |||||||||||||||    
T  26644974 ccgaactgggtcaacaatcttttggtgtgtttgttc 26645009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 19 - 149
Target Start/End: Original strand, 47102822 - 47102951
Alignment:
Q  19 tgtaagcttttaagctaatttcttgtaactcttttgtaacactttcatcatagtagattgaagggctgctctnnnnnnnagattaggtcatattggaccg 118  Q
    |||| |||| |||| |||||||||||||||| || |||||| ||||||| |||| ||||| | |||||||||       |||||||||||||||||||||    
T  47102822 tgtatgcttataagttaatttcttgtaactcatt-gtaacattttcatcttagtggattggatggctgctctctcccctagattaggtcatattggaccg 47102920  T
Q  119 aactgggtcaacaatgttggtgtgtttgttc 149  Q
    ||||||||||||||| |||||||||||||||    
T  47102921 aactgggtcaacaattttggtgtgtttgttc 47102951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 154 - 244
Target Start/End: Original strand, 16124666 - 16124756
Alignment:
Q  154 ttgtggtgtttctctacacttagatctaggcctgtttttgttgttgttgtttgaagacactttatccattgattaccacttcctttgcttc 244  Q
    |||||||||| ||||||| ||||||||||| |||||||||||||||||| ||| | ||| ||||| |||||||||||||||||||||||||    
T  16124666 ttgtggtgttgctctacatttagatctaggtctgtttttgttgttgttgcttggacacattttattcattgattaccacttcctttgcttc 16124756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 150 - 242
Target Start/End: Complemental strand, 29651763 - 29651670
Alignment:
Q  150 atgcttgtggtgtttctctacacttagatctaggcctgttttt-gttgttgttgtttgaagacactttatccattgattaccacttcctttgct 242  Q
    |||||||||||||| ||||||||||||||||| | |||||||| |||||||||| ||  ||||||||||| |||||||||||||||||||||||    
T  29651763 atgcttgtggtgttgctctacacttagatctaagtctgttttttgttgttgttgattatagacactttattcattgattaccacttcctttgct 29651670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 150 - 242
Target Start/End: Original strand, 40816877 - 40816970
Alignment:
Q  150 atgcttgtggtgtttctctacacttagatctaggcctgtttt-tgttgttgttgtttgaagacactttatccattgattaccacttcctttgct 242  Q
    ||||| |||||||| |||||||||||||| |||| ||||||| ||||||||||| ||| |||||||||||| ||||||||||||||||||||||    
T  40816877 atgctcgtggtgttgctctacacttagatttaggtctgttttttgttgttgttgcttggagacactttatctattgattaccacttcctttgct 40816970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 16 - 129
Target Start/End: Complemental strand, 3281827 - 3281715
Alignment:
Q  16 ttgtgtaagcttttaagctaatttcttgtaactcttttgtaacactttcatcatagtagattgaagggctgctctnnnnnnnagattaggtcatattgga 115  Q
    ||||||||||||  |||||| |||||||||||||||| |||||||||||||||| || ||||| || ||||||||       ||||||||||||||||||    
T  3281827 ttgtgtaagcttgcaagctattttcttgtaactcttt-gtaacactttcatcatcgtggattggagagctgctctctcccccagattaggtcatattgga 3281729  T
Q  116 ccgaactgggtcaa 129  Q
    ||||||||||||||    
T  3281728 ccgaactgggtcaa 3281715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 150 - 239
Target Start/End: Complemental strand, 13598350 - 13598259
Alignment:
Q  150 atgcttgtggtgtttctctacacttagatctaggcctgtttttgttgttgt---tgtttgaagacactttatccattgattaccacttccttt 239  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||   |||||| |||||| ||| | |||||||||||||||||||    
T  13598350 atgcttgtggtgtttctctacacttagatctaggtctgtttttgttgttgttgttgtttggagacac-ttaactattgattaccacttccttt 13598259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 153 - 242
Target Start/End: Original strand, 47098972 - 47099060
Alignment:
Q  153 cttgtggtgtttctctacacttagatctaggcctgtttttgttgttgttgtttgaagacactttatccattgattaccacttcctttgct 242  Q
    ||||||||||| |||||||||||||| |||| ||||||| |||||||||  ||| |||||||||||| ||||||||||||||||||||||    
T  47098972 cttgtggtgttgctctacacttagatttaggtctgtttt-gttgttgttacttggagacactttatctattgattaccacttcctttgct 47099060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 150 - 240
Target Start/End: Complemental strand, 19072879 - 19072788
Alignment:
Q  150 atgcttgtggtgtttctctacacttagatctaggcctg-tttttgttgttgttgtttgaagacactttatccattgattaccacttcctttg 240  Q
    |||||||||||||| |||||||||||||| |||| ||| ||||||||||||||| ||  |||||||||||| ||||||||| ||||||||||    
T  19072879 atgcttgtggtgttgctctacacttagatttaggtctgatttttgttgttgttgcttcgagacactttatctattgattactacttcctttg 19072788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 150 - 240
Target Start/End: Complemental strand, 19120769 - 19120678
Alignment:
Q  150 atgcttgtggtgtttctctacacttagatctaggcctg-tttttgttgttgttgtttgaagacactttatccattgattaccacttcctttg 240  Q
    |||||||||||||| |||||||||||||| |||| ||| ||||||||||||||| ||  |||||||||||| ||||||||| ||||||||||    
T  19120769 atgcttgtggtgttgctctacacttagatttaggtctgatttttgttgttgttgcttcgagacactttatctattgattactacttcctttg 19120678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 16 - 149
Target Start/End: Original strand, 21536547 - 21536681
Alignment:
Q  16 ttgtgtaagcttttaagctaatttcttgtaactcttttgtaacactttcatcatagtagattgaagggctgctctnnnnnnnagattaggtcatattgga 115  Q
    ||||||||||||  |||||| ||||||||||||| |||||||||||||||| ||||| ||||| || ||||||||       |||||||||||| ||  |    
T  21536547 ttgtgtaagcttgcaagctattttcttgtaactc-tttgtaacactttcattatagtggattggagagctgctctctcccccagattaggtcatttttta 21536645  T
Q  116 ccgaactgggtcaacaa--tgttggtgtgtttgttc 149  Q
    |||||||||||||||||  | |||||||||||||||    
T  21536646 ccgaactgggtcaacaatcttttggtgtgtttgttc 21536681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 143 - 242
Target Start/End: Original strand, 26645036 - 26645134
Alignment:
Q  143 tttgttcatgcttgtggtgtttctctacacttagatctaggcctgtttttgttgttgttgtttgaagacactttatccattgattaccacttcctttgct 242  Q
    |||||| |||||||||||||| ||||||||| || |||||| ||| |||||||||||||| || |||||||||||  |||||||||||||||| ||||||    
T  26645036 tttgtttatgcttgtggtgttgctctacactaag-tctaggtctgcttttgttgttgttgcttaaagacactttacacattgattaccacttcatttgct 26645134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 16 - 149
Target Start/End: Complemental strand, 32889559 - 32889426
Alignment:
Q  16 ttgtgtaagcttttaagctaattt-cttgtaactcttttgtaacactttcatcatagtagattgaagggctgctctnnnnnnnagattaggtcatattgg 114  Q
    ||||||||||||  |||||| ||| |||||||||| || |||||||||||||| |||| ||||| || ||||||||       ||| |||||||||||||    
T  32889559 ttgtgtaagcttgcaagctatttttcttgtaactcatt-gtaacactttcatcttagtggattggagagctgctctatcccccagactaggtcatattgg 32889461  T
Q  115 accgaactgggtcaacaatgttggtgtgtttgttc 149  Q
    |||||||| | |||||||| |||||||||||||||    
T  32889460 accgaactagatcaacaatcttggtgtgtttgttc 32889426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 153 - 242
Target Start/End: Original strand, 47102989 - 47103077
Alignment:
Q  153 cttgtggtgtttctctacacttagatctaggcctgtttttgttgttgttgtttgaagacactttatccattgattaccacttcctttgct 242  Q
    ||||||||||| |||||||||||||| |||| ||||||| |||||||||| ||  |||||||||||| ||||||||||||||| ||||||    
T  47102989 cttgtggtgttgctctacacttagatttaggtctgtttt-gttgttgttgctttgagacactttatctattgattaccacttcatttgct 47103077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 150 - 242
Target Start/End: Original strand, 21536715 - 21536806
Alignment:
Q  150 atgcttgtggtgtttctctacacttagatctaggcctgtttttgttgttgttgtttgaagacactttatccattgattaccacttcctttgct 242  Q
    |||||||||||||| ||||||| | || |||||| || ||||||||||||||| ||| ||||||||||  |||||||||||||||||||||||    
T  21536715 atgcttgtggtgttgctctacagtaag-tctaggtctatttttgttgttgttgattggagacactttacacattgattaccacttcctttgct 21536806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 150 - 239
Target Start/End: Original strand, 27104517 - 27104602
Alignment:
Q  150 atgcttgtggtgtttctctacacttagatctaggcctgtttttgttgttgttgtttgaagacactttatccattgattaccacttccttt 239  Q
    |||||||||||||| |||||||||||||| |||| |||||||    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  27104517 atgcttgtggtgttgctctacacttagatttaggtctgtttt----gttgttgcttggagacactttatctattgattaccacttccttt 27104602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 49 - 149
Target Start/End: Complemental strand, 775759 - 775659
Alignment:
Q  49 cttttgtaacactttcatcatagtagattgaagggctgctctnnnnnnnagattaggtcatattggaccgaactgggtcaacaatgttggtgtgtttgtt 148  Q
    ||||||||||||||||||| |||| ||||| || ||| ||||       ||||||||||||||||||||||| |||||||||||| ||| ||||||||||    
T  775759 cttttgtaacactttcatcttagtggattggagagctactctctcccccagattaggtcatattggaccgaattgggtcaacaatcttgatgtgtttgtt 775660  T
Q  149 c 149  Q
    |    
T  775659 c 775659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 153 - 239
Target Start/End: Original strand, 47704084 - 47704171
Alignment:
Q  153 cttgtggtgtttctctacacttagatctaggcctgtttt-tgttgttgttgtttgaagacactttatccattgattaccacttccttt 239  Q
    ||||||||||| |||||||||||||| |||| || |||| |||||||| || ||| |||||||||||| |||||||||||||||||||    
T  47704084 cttgtggtgttgctctacacttagatttaggtctattttttgttgttgctgcttggagacactttatctattgattaccacttccttt 47704171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 41 - 149
Target Start/End: Complemental strand, 37069864 - 37069755
Alignment:
Q  41 ttgtaactcttttgtaacactttcatcatagtagattgaagggctgctctnnnnnnnagattaggtcatattggaccgaactgggtcaacaa--tgttgg 138  Q
    |||||||||||| ||||||||||||||||||| ||| | || | ||||||       |||||||||||||||||||||||||||||||||||  | ||||    
T  37069864 ttgtaactcttt-gtaacactttcatcatagtggatcggagagatgctctctcccccagattaggtcatattggaccgaactgggtcaacaatcttttgg 37069766  T
Q  139 tgtgtttgttc 149  Q
    |||||||||||    
T  37069765 tgtgtttgttc 37069755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 19 - 67
Target Start/End: Original strand, 40816794 - 40816842
Alignment:
Q  19 tgtaagcttttaagctaatttcttgtaactcttttgtaacactttcatc 67  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||    
T  40816794 tgtaagcttataagctaatttcttgtaactcttttgtaacactttcatc 40816842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 37 - 149
Target Start/End: Original strand, 13604622 - 13604735
Alignment:
Q  37 tttcttgtaactcttttgtaacactttcatcatagtagattgaagggctgctctnnnnnnnagattaggtcatattggaccgaactgggtcaacaa--tg 134  Q
    |||||||||||||||| |||||| |||||||||||| ||||| || ||||||||       | |||||||||||||| ||| ||||||||||||||  |     
T  13604622 tttcttgtaactcttt-gtaacattttcatcatagtggattggagagctgctctctcccccatattaggtcatattgaacctaactgggtcaacaatctt 13604720  T
Q  135 ttggtgtgtttgttc 149  Q
    |||||||||||||||    
T  13604721 ttggtgtgtttgttc 13604735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 143 - 239
Target Start/End: Complemental strand, 3281666 - 3281571
Alignment:
Q  143 tttgttcatgcttgtggtgtttctctacacttagatctaggcctgtttttgttgttgttgtttgaagacactttatccattgattaccacttccttt 239  Q
    |||||| || ||||||||||| ||||||||  || |||| | || ||||||||||||||| ||| ||||||||||  ||||||||||||||||||||    
T  3281666 tttgtttattcttgtggtgttgctctacacaaag-tctatgtctttttttgttgttgttgcttggagacactttacacattgattaccacttccttt 3281571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 37 - 149
Target Start/End: Original strand, 19361431 - 19361543
Alignment:
Q  37 tttcttgtaactcttttgtaacactttcatcatagtagattgaagggctgctctnnnnnnnagattaggtcatattggaccgaactgggtcaacaa--tg 134  Q
    ||||||||||| |||| ||||||||||||||||||| ||||| || ||||||||       | ||||||||||||| ||| |||||||||||||||  |     
T  19361431 tttcttgtaacccttt-gtaacactttcatcatagtggattggagagctgctctctcccccatattaggtcatatt-gactgaactgggtcaacaatctt 19361528  T
Q  135 ttggtgtgtttgttc 149  Q
    |||||||||||||||    
T  19361529 ttggtgtgtttgttc 19361543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 37 - 149
Target Start/End: Original strand, 19380071 - 19380183
Alignment:
Q  37 tttcttgtaactcttttgtaacactttcatcatagtagattgaagggctgctctnnnnnnnagattaggtcatattggaccgaactgggtcaacaa--tg 134  Q
    ||||||||||| |||| ||||||||||||||||||| ||||| || ||||||||       | ||||||||||||| ||| |||||||||||||||  |     
T  19380071 tttcttgtaacccttt-gtaacactttcatcatagtggattggagagctgctctctcccccatattaggtcatatt-gactgaactgggtcaacaatctt 19380168  T
Q  135 ttggtgtgtttgttc 149  Q
    |||||||||||||||    
T  19380169 ttggtgtgtttgttc 19380183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 16 - 149
Target Start/End: Original strand, 24202746 - 24202881
Alignment:
Q  16 ttgtgtaagcttttaagctaattt-cttgtaactcttttgtaacactttcatcatagtagattgaagggctgctctnnnnnnnagattaggtcatattgg 114  Q
    ||||||||||||  |||||| ||| |||||||| |||| ||||||||||||||||||| ||||| || ||||||||       |||||||| ||||||||    
T  24202746 ttgtgtaagcttgcaagctatttttcttgtaacccttt-gtaacactttcatcatagtggattggagagctgctctctcccccagattaggccatattgg 24202844  T
Q  115 accgaactgggtcaacaa---tgttggtgtgtttgttc 149  Q
     | |||||||||||||||   | |||||||||||||||    
T  24202845 -ctgaactgggtcaacaatctttttggtgtgtttgttc 24202881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 16 - 133
Target Start/End: Original strand, 19358820 - 19358936
Alignment:
Q  16 ttgtgtaagcttttaagctaattt-cttgtaactcttttgtaacactttcatcatagtagattgaagggctgctctnnnnnnnagattaggtcatattgg 114  Q
    ||||||||||||  |||||| ||| |||||||| |||| ||||||||||||||||||| ||||| || ||||||||       | ||||||||||||| |    
T  19358820 ttgtgtaagcttgcaagctatttttcttgtaacccttt-gtaacactttcatcatagtggattggagagctgctctctcccccatattaggtcatatt-g 19358917  T
Q  115 accgaactgggtcaacaat 133  Q
    || ||||||||||||||||    
T  19358918 actgaactgggtcaacaat 19358936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 153 - 239
Target Start/End: Complemental strand, 32889387 - 32889302
Alignment:
Q  153 cttgtggtgtttctctacacttagatctaggcctgtttttgttgttgttgtttgaagacactttatccattgattaccacttccttt 239  Q
    ||||||||||| |||||||||||||| |||  ||| |||||||||| ||| ||| ||||||||||  ||||||||| ||||| ||||    
T  32889387 cttgtggtgttgctctacacttagatttagatctg-ttttgttgttattgcttggagacactttacacattgattatcactttcttt 32889302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 143 - 242
Target Start/End: Complemental strand, 37069728 - 37069628
Alignment:
Q  143 tttgttcatgcttgtggtgtttctctacacttagatctaggcctg--tttttgttgttgttgtttgaagacactttatccattgattaccacttcctttg 240  Q
    |||||| |||||||||||||| ||||||| |||  |||| | |||  ||||| || |||||| ||| ||||||||||  |||||||||||||||||||||    
T  37069728 tttgtttatgcttgtggtgttgctctaca-ttaagtctaagtctgtttttttttttttgttgcttggagacactttacacattgattaccacttcctttg 37069630  T
Q  241 ct 242  Q
    ||    
T  37069629 ct 37069628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 186 - 242
Target Start/End: Complemental strand, 22819341 - 22819285
Alignment:
Q  186 tgtttttgttgttgttgtttgaagacactttatccattgattaccacttcctttgct 242  Q
    |||| |||||||||||| || | ||||||||||||||||||||||| || |||||||    
T  22819341 tgttgttgttgttgttgcttaaggacactttatccattgattaccattttctttgct 22819285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 30 - 90
Target Start/End: Complemental strand, 22819535 - 22819475
Alignment:
Q  30 aagctaatttcttgtaactcttttgtaacactttcatcatagtagattgaagggctgctct 90  Q
    |||||||||||||||||||| |||||| |||||||||| | || ||||| |||||| ||||    
T  22819535 aagctaatttcttgtaactcatttgtatcactttcatcttggtggattggagggctactct 22819475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 102 - 133
Target Start/End: Complemental strand, 13138006 - 13137975
Alignment:
Q  102 taggtcatattggaccgaactgggtcaacaat 133  Q
    ||||||||||||||||||||||||||||||||    
T  13138006 taggtcatattggaccgaactgggtcaacaat 13137975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 188 - 239
Target Start/End: Original strand, 19359028 - 19359079
Alignment:
Q  188 tttttgttgttgttgtttgaagacactttatccattgattaccacttccttt 239  Q
    ||||||||||||||| ||| ||||||||||  ||| ||||||||||||||||    
T  19359028 tttttgttgttgttgcttggagacactttacacatagattaccacttccttt 19359079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 98 - 148
Target Start/End: Complemental strand, 28265588 - 28265537
Alignment:
Q  98 agattaggtcatattggaccgaactgggtcaacaat-gttggtgtgtttgtt 148  Q
    |||||||||||  |||||||||||||||||||||||  ||||||||||||||    
T  28265588 agattaggtcaagttggaccgaactgggtcaacaatctttggtgtgtttgtt 28265537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 100 - 149
Target Start/End: Original strand, 3157001 - 3157051
Alignment:
Q  100 attaggtcatattggaccgaactgggtcaacaat-gttggtgtgtttgttc 149  Q
    |||||||||  |||||||||||||||||||||||  |||||||||||||||    
T  3157001 attaggtcaagttggaccgaactgggtcaacaatctttggtgtgtttgttc 3157051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 98 - 147
Target Start/End: Complemental strand, 28220260 - 28220210
Alignment:
Q  98 agattaggtcatattggaccgaactgggtcaacaat-gttggtgtgtttgt 147  Q
    |||||||||||  |||||||||||||||||||||||  |||||||||||||    
T  28220260 agattaggtcaagttggaccgaactgggtcaacaatctttggtgtgtttgt 28220210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 150 - 234
Target Start/End: Original strand, 9023977 - 9024059
Alignment:
Q  150 atgcttgtggtgtttctctacacttagatctaggcctgtttttgttgttgttgtttgaagacactttatccattgattaccactt 234  Q
    |||||||||||||| || ||||||||||| ||||  |||||  |||||| ||| |||  |  |||||||||||||||||||||||    
T  9023977 atgcttgtggtgttgctatacacttagatttaggtatgttt--gttgttattgcttggggctactttatccattgattaccactt 9024059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 150 - 235
Target Start/End: Complemental strand, 9476213 - 9476130
Alignment:
Q  150 atgcttgtggtgtttctctacacttagatctaggcctgtttttgttgttgttgtttgaagacactttatccattgattaccacttc 235  Q
    ||||||||| ||||| |||||||||| || || | ||||||| ||| |||||| ||| |||||||||||||||| ||||| |||||    
T  9476213 atgcttgtgatgttt-tctacacttatatttatgtctgtttt-gttattgttgcttggagacactttatccattaattactacttc 9476130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 194 - 239
Target Start/End: Original strand, 13604812 - 13604857
Alignment:
Q  194 ttgttgttgtttgaagacactttatccattgattaccacttccttt 239  Q
    ||||||||||||| ||||||||||  ||||||||| ||||||||||    
T  13604812 ttgttgttgtttggagacactttacacattgattatcacttccttt 13604857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 102 - 148
Target Start/End: Original strand, 41361052 - 41361100
Alignment:
Q  102 taggtcatattggaccgaactgggtcaaca--atgttggtgtgtttgtt 148  Q
    ||||||||||||||||||||| ||||||||  || ||||||||||||||    
T  41361052 taggtcatattggaccgaactaggtcaacaatatcttggtgtgtttgtt 41361100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 100 - 147
Target Start/End: Complemental strand, 28223453 - 28223405
Alignment:
Q  100 attaggtcatattggaccgaactgggtcaacaat-gttggtgtgtttgt 147  Q
    |||||||||  |||||||||||||||||||||||  |||||||||||||    
T  28223453 attaggtcaagttggaccgaactgggtcaacaatctttggtgtgtttgt 28223405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 98 - 145
Target Start/End: Original strand, 31659372 - 31659420
Alignment:
Q  98 agattaggtcatattggaccgaactgggtcaacaat-gttggtgtgttt 145  Q
    |||||||||||  |||||||||||||||||||||||  |||||||||||    
T  31659372 agattaggtcaagttggaccgaactgggtcaacaatctttggtgtgttt 31659420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 98 - 149
Target Start/End: Complemental strand, 37559901 - 37559849
Alignment:
Q  98 agattaggtcatattggaccgaactgggtcaacaat-gttggtgtgtttgttc 149  Q
    |||||||||||  |||||||||||| ||||||||||  |||||||||||||||    
T  37559901 agattaggtcaagttggaccgaacttggtcaacaatctttggtgtgtttgttc 37559849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 95; Significance: 1e-46; HSPs: 34)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 16 - 151
Target Start/End: Original strand, 5572218 - 5572353
Alignment:
Q  16 ttgtgtaagcttttaagctaatttcttgtaactcttttgtaacactttcatcatagtagattgaagggctgctctnnnnnnnagattaggtcatattgga 115  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||       ||||||||||||||||||    
T  5572218 ttgtgtaagcttataagctaatttcttgtaactcttttgtaacactttcatcatagtggattggagggctgctctctcccctagattaggtcatattgga 5572317  T
Q  116 ccgaactgggtcaacaatgttggtgtgtttgttcat 151  Q
    ||||| |||||||||||| |||||||||||||||||    
T  5572318 ccgaattgggtcaacaatcttggtgtgtttgttcat 5572353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 19 - 149
Target Start/End: Original strand, 10077145 - 10077275
Alignment:
Q  19 tgtaagcttttaagctaatttcttgtaactcttttgtaacactttcatcatagtagattgaagggctgctctnnnnnnnagattaggtcatattggaccg 118  Q
    ||||||||| |||||||||||||||||||| ||||||||||||||||||||||| ||||| |||||||||||       |||||||||||||||||||||    
T  10077145 tgtaagcttataagctaatttcttgtaacttttttgtaacactttcatcatagtggattggagggctgctctctcccccagattaggtcatattggaccg 10077244  T
Q  119 aactgggtcaacaatgttggtgtgtttgttc 149  Q
    || |||||||||||| |||||||||||||||    
T  10077245 aattgggtcaacaatcttggtgtgtttgttc 10077275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 15 - 149
Target Start/End: Complemental strand, 22963820 - 22963687
Alignment:
Q  15 tttgtgtaagcttttaagctaatttcttgtaactcttttgtaacactttcatcatagtagattgaagggctgctctnnnnnnnagattaggtcatattgg 114  Q
    |||||||||| || |||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||       ||||| ||||||||||     
T  22963820 tttgtgtaaggttataagctaatttcttgtaactcttttgtaacactttcatcatagtggattggagggctgctct-ctccccagatttggtcatattgc 22963722  T
Q  115 accgaactgggtcaacaatgttggtgtgtttgttc 149  Q
    ||||||||||||||||||| |||||||||||||||    
T  22963721 accgaactgggtcaacaatcttggtgtgtttgttc 22963687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 15 - 149
Target Start/End: Original strand, 23824573 - 23824706
Alignment:
Q  15 tttgtgtaagcttttaagctaatttcttgtaactcttttgtaacactttcatcatagtagattgaagggctgctctnnnnnnnagattaggtcatattgg 114  Q
    |||||||||| || |||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||       ||||| ||||||||||     
T  23824573 tttgtgtaaggttataagctaatttcttgtaactcttttgtaacactttcatcatagtggattggagggctgctct-ctccccagatttggtcatattgc 23824671  T
Q  115 accgaactgggtcaacaatgttggtgtgtttgttc 149  Q
    ||||||||||||||||||| |||||||||||||||    
T  23824672 accgaactgggtcaacaatcttggtgtgtttgttc 23824706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 19 - 149
Target Start/End: Complemental strand, 31979630 - 31979500
Alignment:
Q  19 tgtaagcttttaagctaatttcttgtaactcttttgtaacactttcatcatagtagattgaagggctgctctnnnnnnnagattaggtcatattggaccg 118  Q
    ||||||||| |||| ||||||||||||||||||||| |||||||||||| |||| ||||| |||||||||||       |||||| ||||||||||||||    
T  31979630 tgtaagcttataagttaatttcttgtaactcttttgcaacactttcatcttagtggattggagggctgctctctcccccagattatgtcatattggaccg 31979531  T
Q  119 aactgggtcaacaatgttggtgtgtttgttc 149  Q
    ||||||||||||||| |||||||||||||||    
T  31979530 aactgggtcaacaatcttggtgtgtttgttc 31979500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 16 - 149
Target Start/End: Original strand, 31086450 - 31086583
Alignment:
Q  16 ttgtgtaagcttttaagctaatttcttgtaactcttttgtaacactttcatcatagtagattgaagggctgctctnnnnnnnagattaggtcatattgga 115  Q
    |||||||||||| ||||||||||||||||||||| |||||||||||||||||||||| ||||| || | ||||||       ||||||| ||||||||||    
T  31086450 ttgtgtaagcttataagctaatttcttgtaactcctttgtaacactttcatcatagtggattggagagttgctctctcccctagattagatcatattgga 31086549  T
Q  116 ccgaactgggtcaacaatgttggtgtgtttgttc 149  Q
    | |||||||||||||||| |||||||||||||||    
T  31086550 ctgaactgggtcaacaatcttggtgtgtttgttc 31086583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 16 - 149
Target Start/End: Complemental strand, 18232965 - 18232832
Alignment:
Q  16 ttgtgtaagcttttaagctaatttcttgtaactcttttgtaacactttcatcatagtagattgaagggctgctctnnnnnnnagattaggtcatattgga 115  Q
    |||||||||||| |||||| |||||||||||||||||||||||||||||||||||||  |||| |||| ||||||       ||||||||||||||||||    
T  18232965 ttgtgtaagcttataagctgatttcttgtaactcttttgtaacactttcatcatagtgaattggagggttgctctctcccccagattaggtcatattgga 18232866  T
Q  116 ccgaactgggtcaacaatgttggtgtgtttgttc 149  Q
    ||||  || ||||||||| |||||||||||||||    
T  18232865 ccgatttgagtcaacaatcttggtgtgtttgttc 18232832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 150 - 244
Target Start/End: Complemental strand, 18232797 - 18232703
Alignment:
Q  150 atgcttgtggtgtttctctacacttagatctaggcctgtttttgttgttgttgtttgaagacactttatccattgattaccacttcctttgcttc 244  Q
    |||||||||||||| |||||||||||||||||||  ||||||||||||||||| ||| |||||||||||| ||||||||||||||||||||||||    
T  18232797 atgcttgtggtgttgctctacacttagatctaggtttgtttttgttgttgttgcttggagacactttatctattgattaccacttcctttgcttc 18232703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 150 - 242
Target Start/End: Original strand, 10077310 - 10077402
Alignment:
Q  150 atgcttgtggtgtttctctacacttagatctaggcctgtttttgttgttgttgtttgaagacactttatccattgattaccacttcctttgct 242  Q
    |||||||||||||| |||||||||||||| |||| |||||||||||||||||| ||| |||||||||||| ||||||||||||||||||||||    
T  10077310 atgcttgtggtgttgctctacacttagatttaggtctgtttttgttgttgttgcttggagacactttatctattgattaccacttcctttgct 10077402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 150 - 242
Target Start/End: Complemental strand, 31979465 - 31979373
Alignment:
Q  150 atgcttgtggtgtttctctacacttagatctaggcctgtttttgttgttgttgtttgaagacactttatccattgattaccacttcctttgct 242  Q
    ||||||||| |||| |||||||||||||| |||| |||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||    
T  31979465 atgcttgtgatgttgctctacacttagatttaggtctgtttttgttgttgttgcttgaagacactttatctattgattaccacttcctttgct 31979373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 16 - 149
Target Start/End: Original strand, 5757456 - 5757590
Alignment:
Q  16 ttgtgtaagcttttaagctaatttcttgtaactcttttgtaacactttcatcatagtagattgaagggctgctctnnnnnnnagattaggtcatattgga 115  Q
    |||| |||||||  |||||| |||||||||||||||| ||||||||||||||||||| ||||| || ||||||||       ||||||||||||||||||    
T  5757456 ttgtataagcttgcaagctattttcttgtaactcttt-gtaacactttcatcatagtggattggagagctgctctctcccccagattaggtcatattgga 5757554  T
Q  116 ccgaactgggtcaacaa--tgttggtgtgtttgttc 149  Q
    |||||||||||||||||  | |||||||||||||||    
T  5757555 ccgaactgggtcaacaatcttttggtgtgtttgttc 5757590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 52 - 149
Target Start/End: Original strand, 5017482 - 5017579
Alignment:
Q  52 ttgtaacactttcatcatagtagattgaagggctgctctnnnnnnnagattaggtcatattggaccgaactgggtcaacaatgttggtgtgtttgttc 149  Q
    ||||||||||||||||||||||||||| |||| ||||||       ||||||||||||||| |||||||||||||||||||| |||||||||||||||    
T  5017482 ttgtaacactttcatcatagtagattggagggttgctctctcccctagattaggtcatatttgaccgaactgggtcaacaatcttggtgtgtttgttc 5017579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 150 - 242
Target Start/End: Original strand, 5572741 - 5572833
Alignment:
Q  150 atgcttgtggtgtttctctacacttagatctaggcctgtttttgttgttgttgtttgaagacactttatccattgattaccacttcctttgct 242  Q
    |||||||||||||| |||||||||||||| || | ||||||||| |||||||| ||| |||||||||||| ||||||||||||||||||||||    
T  5572741 atgcttgtggtgttgctctacacttagatttatgtctgtttttgctgttgttgcttggagacactttatctattgattaccacttcctttgct 5572833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 150 - 242
Target Start/End: Original strand, 5017613 - 5017709
Alignment:
Q  150 atgcttgtggtgtttctctacacttagatctaggcctgtttttgtt----gttgttgtttgaagacactttatccattgattaccacttcctttgct 242  Q
    |||||||||||||| ||||||||||||||||||| |||||||| ||    ||||||| ||| |||||||||||||||||||||||||||||||||||    
T  5017613 atgcttgtggtgttgctctacacttagatctaggtctgttttttttttttgttgttgcttggagacactttatccattgattaccacttcctttgct 5017709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 19 - 149
Target Start/End: Complemental strand, 4630071 - 4629940
Alignment:
Q  19 tgtaagcttttaagctaatttcttgtaactcttttgtaacactttcatcatagtagattgaagggctgctctnnnnnnnagattaggtcatattggaccg 118  Q
    ||||||||| |||| ||||||||||||||| |||||||||||||||||| |||| ||||| || ||||||||       ||||||||||||||||||| |    
T  4630071 tgtaagcttataagttaatttcttgtaactattttgtaacactttcatcttagtggattggagagctgctctcttccctagattaggtcatattggactg 4629972  T
Q  119 aactgggtcaacaat-gttggtgtgtttgttc 149  Q
    ||||| |||||||||  ||| |||||||||||    
T  4629971 aactgagtcaacaatctttgatgtgtttgttc 4629940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 150 - 238
Target Start/End: Complemental strand, 22963652 - 22963563
Alignment:
Q  150 atgcttgtggtgtttctctacacttagatctaggcctgttttt-gttgttgttgtttgaagacactttatccattgattaccacttcctt 238  Q
    |||||||||||||| ||||||||||||||||||| |||||||| |||||||||| ||| |||||||||||  ||||||||||||||||||    
T  22963652 atgcttgtggtgttgctctacacttagatctaggtctgttttttgttgttgttgcttggagacactttattaattgattaccacttcctt 22963563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 150 - 238
Target Start/End: Original strand, 23824741 - 23824830
Alignment:
Q  150 atgcttgtggtgtttctctacacttagatctaggcctg-tttttgttgttgttgtttgaagacactttatccattgattaccacttcctt 238  Q
    |||||||||||||| ||||||||||||||||||| ||| ||||||||||||||| ||| |||||||||||  ||||||||||||||||||    
T  23824741 atgcttgtggtgttgctctacacttagatctaggtctgttttttgttgttgttgcttggagacactttattaattgattaccacttcctt 23824830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 150 - 242
Target Start/End: Complemental strand, 21355988 - 21355898
Alignment:
Q  150 atgcttgtggtgtttctctacacttagatctaggcctgtttttgttgttgttgtttgaagacactttatccattgattaccacttcctttgct 242  Q
    |||||||||||||| ||||||||| ||| ||||| |||||||||||||||||| ||||||||||||||  |||||||||||||||||||||||    
T  21355988 atgcttgtggtgttgctctacact-aga-ctaggtctgtttttgttgttgttgcttgaagacactttacacattgattaccacttcctttgct 21355898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 154 - 242
Target Start/End: Original strand, 31086611 - 31086699
Alignment:
Q  154 ttgtggtgtttctctacacttagatctaggcctgtttttgttgttgttgtttgaagacactttatccattgattaccacttcctttgct 242  Q
    ||||| |||| |||||||||||||| || | |||||||||||||| ||| ||| |||||||||||||||||||||||||||||||||||    
T  31086611 ttgtgatgttgctctacacttagatttatgtctgtttttgttgtttttgcttggagacactttatccattgattaccacttcctttgct 31086699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 143 - 242
Target Start/End: Original strand, 5757616 - 5757713
Alignment:
Q  143 tttgttcatgcttgtggtgtttctctacacttagatctaggcctgtttttgttgttgttgtttgaagacactttatccattgattaccacttcctttgct 242  Q
    |||||| |||||||||||||| ||||||||| |||| |||| |||||||||||||||||| ||| ||||||||||  |||||||||||||||||||||||    
T  5757616 tttgtttatgcttgtggtgttgctctacact-agat-taggtctgtttttgttgttgttgcttggagacactttacacattgattaccacttcctttgct 5757713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 37 - 148
Target Start/End: Complemental strand, 21356134 - 21356022
Alignment:
Q  37 tttcttgtaactcttttgtaacactttcatcatagtagattgaagggctgctctnnnnnnnagattaggtcatattggaccgaactgggtcaacaa--tg 134  Q
    |||||||||||||||  ||||||||||||||||||| ||||| || ||||||||       |||||||||||||||||||||||||||||||||||  |     
T  21356134 tttcttgtaactctta-gtaacactttcatcatagtggattggagagctgctctctcctccagattaggtcatattggaccgaactgggtcaacaatctt 21356036  T
Q  135 ttggtgtgtttgtt 148  Q
    ||||||||||||||    
T  21356035 ttggtgtgtttgtt 21356022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 19 - 124
Target Start/End: Original strand, 21801324 - 21801429
Alignment:
Q  19 tgtaagcttttaagctaatttcttgtaactcttttgtaacactttcatcatagtagattgaagggctgctctnnnnnnnagattaggtcatattggaccg 118  Q
    ||||||||| |||| |||||||||||||||||||||||||||||| ||| |||| ||||| || |||||||        ||||||||||||||||||| |    
T  21801324 tgtaagcttataagataatttcttgtaactcttttgtaacacttttatcttagtggattggagagctgctcgctcccccagattaggtcatattggactg 21801423  T
Q  119 aactgg 124  Q
    ||||||    
T  21801424 aactgg 21801429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 19 - 148
Target Start/End: Original strand, 24435951 - 24436079
Alignment:
Q  19 tgtaagcttttaagctaatttcttgtaactcttttgtaacactttcatcatagtagattgaagggctgctctnnnnnnnagattaggtcatattggaccg 118  Q
    ||||||||| |||||||||||||||||| || ||||||||| ||||||| |||| ||| | |||||||||||       ||| |||||||||||||| ||    
T  24435951 tgtaagcttataagctaatttcttgtaattcatttgtaacattttcatcctagtggatcggagggctgctctctcccctagagtaggtcatattggatcg 24436050  T
Q  119 aactgggtcaacaatgttggtgtgtttgtt 148  Q
    ||||||||  || || ||||||||||||||    
T  24436051 aactgggt-taccatcttggtgtgtttgtt 24436079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 143 - 239
Target Start/End: Complemental strand, 31936546 - 31936451
Alignment:
Q  143 tttgttcatgcttgtggtgtttctctacacttagatctaggcctgtttttgttgttgttgtttgaagacactttatccattgattaccacttccttt 239  Q
    |||||| |||||||||||||| |||||||||| |||  ||| ||||||| |||||||||| ||| ||||||||||  ||||||||||||||||||||    
T  31936546 tttgtttatgcttgtggtgttgctctacactttgattaaggtctgtttt-gttgttgttgcttggagacactttacacattgattaccacttccttt 31936451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 166 - 238
Target Start/End: Original strand, 21801510 - 21801583
Alignment:
Q  166 tctacacttagatctaggcctg-tttttgttgttgttgtttgaagacactttatccattgattaccacttcctt 238  Q
    ||||||||||||| |||| ||| ||||||||||||||| ||| |||||||||||| ||||||||||||||||||    
T  21801510 tctacacttagatttaggtctgatttttgttgttgttgcttggagacactttatctattgattaccacttcctt 21801583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 153 - 233
Target Start/End: Complemental strand, 22708967 - 22708888
Alignment:
Q  153 cttgtggtgtttctctacacttagatctaggcctgtttttgttgttgttgtttgaagacactttatccattgattaccact 233  Q
    ||||||||||| ||||||| ||||||||||| |||||||||||||||||| ||| ||||||||||  ||| ||||||||||    
T  22708967 cttgtggtgttgctctaca-ttagatctaggtctgtttttgttgttgttgcttggagacactttacacatagattaccact 22708888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 52 - 149
Target Start/End: Complemental strand, 31936671 - 31936574
Alignment:
Q  52 ttgtaacactttcatcatagtagattgaagggctgctctnnnnnnnagattaggtcatattggaccgaactgggtcaacaatgttggtgtgtttgttc 149  Q
    |||||||||||||||  |||| ||||| || ||||||||       ||| ||||||||||||||||||||| |||||||||| |||||||||||||||    
T  31936671 ttgtaacactttcatattagtggattggagagctgctctctctcccagactaggtcatattggaccgaactaggtcaacaatcttggtgtgtttgttc 31936574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 52 - 149
Target Start/End: Complemental strand, 22709102 - 22709003
Alignment:
Q  52 ttgtaacactttcatcatagtagattgaagggctgctctnnnnnnnagattaggtcatattggaccgaactgggtcaacaa--tgttggtgtgtttgttc 149  Q
    ||||||||||||||||||||| ||||| || ||||||||       ||||||| |||||||| |||||||| |||||||||  | |||||||||||||||    
T  22709102 ttgtaacactttcatcatagtggattggagagctgctctctcccccagattagatcatattgaaccgaactaggtcaacaattttttggtgtgtttgttc 22709003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 150 - 195
Target Start/End: Complemental strand, 4629905 - 4629860
Alignment:
Q  150 atgcttgtggtgtttctctacacttagatctaggcctgtttttgtt 195  Q
    |||||||||||||| |||||||||||||| |||| |||||||||||    
T  4629905 atgcttgtggtgttgctctacacttagatttaggtctgtttttgtt 4629860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 37 - 149
Target Start/End: Original strand, 5674769 - 5674882
Alignment:
Q  37 tttcttgtaactcttttgtaacactttcatcatagtagattgaagggctgctctnnnnnnnagattaggtcatattggaccgaactgggtcaacaat--- 133  Q
    ||||||||||| |||| ||||||||||||||||| | ||||| || ||||||||       |||||||| |||||||| | ||||||||||||||||       
T  5674769 tttcttgtaacccttt-gtaacactttcatcatattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaatctc 5674866  T
Q  134 gttggtgtgtttgttc 149  Q
     |||||||||||||||    
T  5674867 tttggtgtgtttgttc 5674882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 187 - 239
Target Start/End: Original strand, 26258181 - 26258233
Alignment:
Q  187 gtttttgttgttgttgtttgaagacactttatccattgattaccacttccttt 239  Q
    |||||||||||||||| ||| ||||||||||  ||||| ||||||||||||||    
T  26258181 gtttttgttgttgttgcttggagacactttacacattggttaccacttccttt 26258233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 98 - 148
Target Start/End: Original strand, 16569156 - 16569207
Alignment:
Q  98 agattaggtcatattggaccgaactgggtcaacaat-gttggtgtgtttgtt 148  Q
    |||||||||||  |||||||||||||||||||||||  ||||||||||||||    
T  16569156 agattaggtcaagttggaccgaactgggtcaacaatctttggtgtgtttgtt 16569207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 143 - 236
Target Start/End: Original strand, 24436108 - 24436197
Alignment:
Q  143 tttgttcatgcttgtggtgtttctctacacttagatctaggcctgtttttgttgttgttgtttgaagacactttatccattgattaccacttcc 236  Q
    |||||| |||||||| ||||  |||||||||||||| |||  ||  ||||  |||||||||||| |||||||||||| ||||||||||| ||||    
T  24436108 tttgtttatgcttgttgtgt--ctctacacttagatttagatcttatttt--tgttgttgtttgtagacactttatctattgattaccatttcc 24436197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 29 - 133
Target Start/End: Original strand, 33335921 - 33336023
Alignment:
Q  29 taagctaatttcttgtaactcttttgtaacactttcatcatagtagattgaagggctgctctnnnnnnnagattaggtcatattggaccgaactgggtca 128  Q
    |||||||  ||||||||||||||||||||||| |||| |||| | ||||| || ||||||||       ||||||||||| ||||| | |||||||||||    
T  33335921 taagctagattcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggtcacattgg-ctgaactgggtca 33336018  T
Q  129 acaat 133  Q
    |||||    
T  33336019 acaat 33336023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 93; Significance: 2e-45; HSPs: 43)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 16 - 149
Target Start/End: Original strand, 23799554 - 23799687
Alignment:
Q  16 ttgtgtaagcttttaagctaatttcttgtaactcttttgtaacactttcatcatagtagattgaagggctgctctnnnnnnnagattaggtcatattgga 115  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||       | ||||||||||||||||    
T  23799554 ttgtgtaagcttgtaagctaatttcttgtaactcttttgtaacactttcatcatagtggattggagggctgctctctcctccaaattaggtcatattgga 23799653  T
Q  116 ccgaactgggtcaacaatgttggtgtgtttgttc 149  Q
    |||||||||||||||||| |||||||||||||||    
T  23799654 ccgaactgggtcaacaatcttggtgtgtttgttc 23799687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 149
Target Start/End: Original strand, 5702446 - 5702593
Alignment:
Q  1 attaggttttcctctttgtgtaagcttttaagctaatttcttgtaactcttttgtaacactttcatcatagtagattgaagggctgctctnnnnnnnaga 100  Q
    |||||||||| ||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||  ||||| |||| ||||||       | |    
T  5702446 attaggttttgctctt-gtgtaagcttataagctaatttcttgtaactcttttgtaacactttcatcataggggattggagggatgctctctcccccata 5702544  T
Q  101 ttaggtcatattggaccgaactgggtcaacaatgttggtgtgtttgttc 149  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||    
T  5702545 ttaggtcatattggaccgaactgggtcaacaatcttggtgtgtttgttc 5702593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 16 - 149
Target Start/End: Original strand, 26403207 - 26403340
Alignment:
Q  16 ttgtgtaagcttttaagctaatttcttgtaactcttttgtaacactttcatcatagtagattgaagggctgctctnnnnnnnagattaggtcatattgga 115  Q
    ||||| |||||| |||||||||||| | ||||||||||||||||||||||||||||| ||||| || ||||||||       ||||||||||||||||||    
T  26403207 ttgtgcaagcttgtaagctaatttcctataactcttttgtaacactttcatcatagtggattggagagctgctctctcccccagattaggtcatattgga 26403306  T
Q  116 ccgaactgggtcaacaatgttggtgtgtttgttc 149  Q
    |||||||||||||||||| |||||||||||||||    
T  26403307 ccgaactgggtcaacaatcttggtgtgtttgttc 26403340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 19 - 151
Target Start/End: Complemental strand, 6127338 - 6127205
Alignment:
Q  19 tgtaagcttttaagctaatttcttgtaactcttttgtaacactttcatcatagtagattgaagggctgctctnnnnnnnagattaggtcatattggaccg 118  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||| || ||||||||       | |||||||||||||||||||    
T  6127338 tgtaagcttataagctaatttcttgtaactcttttgtaacactttcatcatagtggattggagagctgctctcttccccaaattaggtcatattggaccg 6127239  T
Q  119 aactgggtcaacaat-gttggtgtgtttgttcat 151  Q
    ||||| |||||||||  ||| |||||||||||||    
T  6127238 aactgagtcaacaatatttgatgtgtttgttcat 6127205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 150 - 242
Target Start/End: Original strand, 5702628 - 5702720
Alignment:
Q  150 atgcttgtggtgtttctctacacttagatctaggcctgtttttgttgttgttgtttgaagacactttatccattgattaccacttcctttgct 242  Q
    |||||||||||| | ||||||||||||||||||| |||||||||||||||||| | | ||||||||||| |||||||||||||||| ||||||    
T  5702628 atgcttgtggtgatgctctacacttagatctaggtctgtttttgttgttgttgctaggagacactttattcattgattaccacttcatttgct 5702720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 150 - 242
Target Start/End: Original strand, 9765965 - 9766057
Alignment:
Q  150 atgcttgtggtgtttctctacacttagatctaggcctgtttttgttgttgttgtttgaagacactttatccattgattaccacttcctttgct 242  Q
    |||||||||||||| |||||||||||||| ||||  ||||||||||||||||| ||| |||||||||||| |||||||| |||||||||||||    
T  9765965 atgcttgtggtgttgctctacacttagatttaggtttgtttttgttgttgttgcttggagacactttatctattgattatcacttcctttgct 9766057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 52 - 151
Target Start/End: Original strand, 4696609 - 4696708
Alignment:
Q  52 ttgtaacactttcatcatagtagattgaagggctgctctnnnnnnnagattaggtcatattggaccgaactgggtcaacaatgttggtgtgtttgttcat 151  Q
    ||||||| ||||||||||||| ||||| |||||||||||       |||||||||||||||||| ||||||||||||||||| |||||||||||||||||    
T  4696609 ttgtaactctttcatcatagtggattggagggctgctctctcccccagattaggtcatattggatcgaactgggtcaacaatcttggtgtgtttgttcat 4696708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 16 - 149
Target Start/End: Complemental strand, 7412460 - 7412325
Alignment:
Q  16 ttgtgtaagcttttaagctaatttcttgtaactcttttgtaacactttcatcatagtagattgaagggctgctctnnnnnnnagattaggtcatattgga 115  Q
    ||||||||||||  ||| || |||||||||||||||| ||||||||||||||||||| ||||| || ||||||||       | ||||||||||||||||    
T  7412460 ttgtgtaagcttgcaagttattttcttgtaactcttt-gtaacactttcatcatagtggattggagagctgctctctcccccatattaggtcatattgga 7412362  T
Q  116 ccgaactgggtcaacaatgt---tggtgtgtttgttc 149  Q
    |||||||||||||||||| |   ||||||||||||||    
T  7412361 ccgaactgggtcaacaattttcatggtgtgtttgttc 7412325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 150 - 239
Target Start/End: Original strand, 26403375 - 26403464
Alignment:
Q  150 atgcttgtggtgtttctctacacttagatctaggcctgtttttgttgttgttgtttgaagacactttatccattgattaccacttccttt 239  Q
    |||||||||||||| |||||||||||||| |||| |||||||||||||| ||| ||| |||||| ||||| |||||||||||||||||||    
T  26403375 atgcttgtggtgttgctctacacttagatttaggtctgtttttgttgttattgcttggagacacattatctattgattaccacttccttt 26403464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 16 - 149
Target Start/End: Original strand, 19752371 - 19752504
Alignment:
Q  16 ttgtgtaagcttttaagctaattt-cttgtaactcttttgtaacactttcatcatagtagattgaagggctgctctnnnnnnnagattaggtcatattgg 114  Q
    ||||||||||||  |||||| ||| |||||||||| || |||||||||||||| |||| ||||| || ||||||||       ||| |||||||||||||    
T  19752371 ttgtgtaagcttgcaagctatttttcttgtaactcatt-gtaacactttcatcttagtggattggagagctgctctctcccctagactaggtcatattgg 19752469  T
Q  115 accgaactgggtcaacaatgttggtgtgtttgttc 149  Q
    |||||||| |||||||||| |||||||||||||||    
T  19752470 accgaactaggtcaacaatcttggtgtgtttgttc 19752504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 16 - 149
Target Start/End: Complemental strand, 4456147 - 4456013
Alignment:
Q  16 ttgtgtaagcttttaagctaatttcttgtaactcttttgtaacactttcatcatagtagattgaagggctgctctnnnnnnnagattaggtcatattgga 115  Q
    ||||||||||||   ||||| |||||||||||||||| ||||||||||||||||||| ||||| || ||||||||       |||||||| |||||||||    
T  4456147 ttgtgtaagcttgccagctattttcttgtaactcttt-gtaacactttcatcatagtggattggagagctgctctctcccccagattaggccatattgga 4456049  T
Q  116 ccgaactgggtcaacaa--tgttggtgtgtttgttc 149  Q
    |||||| |||||| |||  | |||||||||||||||    
T  4456048 ccgaaccgggtcagcaatcttttggtgtgtttgttc 4456013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 16 - 149
Target Start/End: Original strand, 31071206 - 31071342
Alignment:
Q  16 ttgtgtaagcttttaagctaattt-cttgtaactcttttgtaacactttcatcatagtagattgaagggctgctctnnnnnnnagattaggtcatattgg 114  Q
    ||||||||||||  |||||| ||| |||||||| |||| ||||||||||||||||||| ||||| || ||||||||       |||||||||||||||||    
T  31071206 ttgtgtaagcttgcaagctatttttcttgtaacccttt-gtaacactttcatcatagtggattggagagctgctctctcccccagattaggtcatattgg 31071304  T
Q  115 accgaactgggtcaacaa---tgttggtgtgtttgttc 149  Q
    |||||||| |||||||||   | |||||||||||||||    
T  31071305 accgaactcggtcaacaatctttttggtgtgtttgttc 31071342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 150 - 239
Target Start/End: Original strand, 19752539 - 19752627
Alignment:
Q  150 atgcttgtggtgtttctctacacttagatctaggcctgtttttgttgttgttgtttgaagacactttatccattgattaccacttccttt 239  Q
    |||||||||||||| | |||||||||||| |||| ||||||| |||||||||| ||| |||||||||||  |||||||||||||||||||    
T  19752539 atgcttgtggtgttgcactacacttagatttaggtctgtttt-gttgttgttgcttggagacactttatatattgattaccacttccttt 19752627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 143 - 242
Target Start/End: Complemental strand, 4455986 - 4455888
Alignment:
Q  143 tttgttcatgcttgtggtgtttctctacacttagatctaggcctgtttttgttgttgttgtttgaagacactttatccattgattaccacttcctttgct 242  Q
    |||||| |||||||| ||||| ||||||||| || || ||| ||||||||| |||||||| ||| ||||||||||  |||||||||||||||||||||||    
T  4455986 tttgtttatgcttgttgtgttgctctacactaag-tccaggtctgtttttgctgttgttgcttggagacactttacacattgattaccacttcctttgct 4455888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 37 - 133
Target Start/End: Original strand, 19175753 - 19175848
Alignment:
Q  37 tttcttgtaactcttttgtaacactttcatcatagtagattgaagggctgctctnnnnnnnagattaggtcatattggaccgaactgggtcaacaat 133  Q
    |||||||||||||||| ||||||||||||||||||| ||||| || | ||||||       ||||||||||||||||||||||||| ||||||||||    
T  19175753 tttcttgtaactcttt-gtaacactttcatcatagtggattggagagttgctctctcccccagattaggtcatattggaccgaactaggtcaacaat 19175848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 151 - 239
Target Start/End: Complemental strand, 26287852 - 26287766
Alignment:
Q  151 tgcttgtggtgtttctctacacttagatctaggcctgtttttgttgttgttgtttgaagacactttatccattgattaccacttccttt 239  Q
    ||||||||||||| ||||||||| ||| ||||| |||||||||||||||||| ||| ||||||||||  ||| ||||||||||||||||    
T  26287852 tgcttgtggtgttgctctacact-aga-ctagggctgtttttgttgttgttgcttggagacactttacacatagattaccacttccttt 26287766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 151 - 239
Target Start/End: Complemental strand, 26313103 - 26313017
Alignment:
Q  151 tgcttgtggtgtttctctacacttagatctaggcctgtttttgttgttgttgtttgaagacactttatccattgattaccacttccttt 239  Q
    ||||||||||||| ||||||||| ||| ||||| |||||||||||||||||| ||| ||||||||||  ||| ||||||||||||||||    
T  26313103 tgcttgtggtgttgctctacact-aga-ctagggctgtttttgttgttgttgcttggagacactttacacatagattaccacttccttt 26313017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 151 - 239
Target Start/End: Original strand, 31071376 - 31071462
Alignment:
Q  151 tgcttgtggtgtttctctacacttagatctaggcctgtttttgttgttgttgtttgaagacactttatccattgattaccacttccttt 239  Q
    ||||||||||||| ||||||||| ||| ||||| |||||||||||||||||| ||| ||||||||||  ||| ||||||||||||||||    
T  31071376 tgcttgtggtgttgctctacact-aga-ctagggctgtttttgttgttgttgcttggagacactttacacatagattaccacttccttt 31071462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 150 - 239
Target Start/End: Complemental strand, 6127172 - 6127082
Alignment:
Q  150 atgcttgtggtgtttctctacacttagatctaggcctgttttt-gttgttgttgtttgaagacactttatccattgattaccacttccttt 239  Q
    |||||||||||||| ||||||||||| || ||   |||||||| |||||||||| ||| |||||||| ||| |||||||||||||||||||    
T  6127172 atgcttgtggtgttgctctacacttaaatttatatctgttttttgttgttgttgcttggagacacttaatctattgattaccacttccttt 6127082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 154 - 219
Target Start/End: Original strand, 4696745 - 4696810
Alignment:
Q  154 ttgtggtgtttctctacacttagatctaggcctgtttttgttgttgttgtttgaagacactttatc 219  Q
    |||||||||| |||||||||||||| || | |||||||||||||||||| ||| ||||||||||||    
T  4696745 ttgtggtgttgctctacacttagatttatgtctgtttttgttgttgttgcttggagacactttatc 4696810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 154 - 242
Target Start/End: Original strand, 23799726 - 23799815
Alignment:
Q  154 ttgtggtgtttctctacacttagatctaggcctgtttt-tgttgttgttgtttgaagacactttatccattgattaccacttcctttgct 242  Q
    |||||||  ||||||||||||||||||||| || |||| ||||||||||  ||| |||||||||||| |||||||| ||||| |||||||    
T  23799726 ttgtggtacttctctacacttagatctaggtctattttttgttgttgtttcttggagacactttatctattgattaacactttctttgct 23799815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 98 - 149
Target Start/End: Original strand, 9765878 - 9765930
Alignment:
Q  98 agattaggtcatattggaccgaactgggtcaacaat-gttggtgtgtttgttc 149  Q
    ||||||||||||||||||||||||||||||||||||  |||||||||||||||    
T  9765878 agattaggtcatattggaccgaactgggtcaacaatcattggtgtgtttgttc 9765930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 16 - 149
Target Start/End: Original strand, 1261931 - 1262066
Alignment:
Q  16 ttgtgtaagcttttaagctaattt-cttgtaactcttttgtaacactttcatcatagtagattgaagggctgctctnnnnnnnagattaggtcatattgg 114  Q
    ||||||||||||  |||||| ||| |||||||| |||| ||||||||||||||||||| ||||| || ||||||||       |||||||||||||||||    
T  1261931 ttgtgtaagcttgcaagctatttttcttgtaacccttt-gtaacactttcatcatagtggattggagagctgctctctcccccagattaggtcatattgg 1262029  T
Q  115 accgaactgggtcaacaa---tgttggtgtgtttgttc 149  Q
       |||||||||||||||   | |||||||||||||||    
T  1262030 -ttgaactgggtcaacaatctttttggtgtgtttgttc 1262066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 153 - 239
Target Start/End: Original strand, 1262101 - 1262185
Alignment:
Q  153 cttgtggtgtttctctacacttagatctaggcctgtttttgttgttgttgtttgaagacactttatccattgattaccacttccttt 239  Q
    ||||||||||| ||||||||| ||| ||||| |||||||||||||||||| ||| ||||||||||  ||| |||||||||| |||||    
T  1262101 cttgtggtgttgctctacact-aga-ctagggctgtttttgttgttgttgcttggagacactttactcatagattaccactcccttt 1262185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 150 - 242
Target Start/End: Original strand, 5990706 - 5990796
Alignment:
Q  150 atgcttgtggtgtttctctacacttagatctaggcctgtttttgttgttgttgtttgaagacactttatccattgattaccacttcctttgct 242  Q
    ||||||||||| ||  ||||||||||||| |||| || |||  |||||||||| |||| |  |||||||||||||||||| ||||||||||||    
T  5990706 atgcttgtggttttgttctacacttagatttaggtctattt--gttgttgttgcttgatgctactttatccattgattactacttcctttgct 5990796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 24 - 146
Target Start/End: Original strand, 9054822 - 9054944
Alignment:
Q  24 gcttttaagctaatttcttgtaactcttttgtaacactttcatcatagtagattgaagggctgctctnnnnnnnagattaggtcatattggaccgaactg 123  Q
    ||||||||||||||||||||||||   |||||| |||||||||| |||| ||||  || ||||||||       ||| ||||||||||||||| |||| |    
T  9054822 gcttttaagctaatttcttgtaaccactttgtatcactttcatcttagtggattagagagctgctctctcctccagagtaggtcatattggactgaacag 9054921  T
Q  124 ggtcaacaatgttggtgtgtttg 146  Q
     || || ||| ||||||||||||    
T  9054922 agtaaataatattggtgtgtttg 9054944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 37 - 133
Target Start/End: Original strand, 18853166 - 18853261
Alignment:
Q  37 tttcttgtaactcttttgtaacactttcatcatagtagattgaagggctgctctnnnnnnnagattaggtcatattggaccgaactgggtcaacaat 133  Q
    ||||||||||| |||||||||||||||||| ||| | ||||| || ||||||||       |||||||| |||||||| | ||||||||||||||||    
T  18853166 tttcttgtaacccttttgtaacactttcattatattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaat 18853261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 37 - 133
Target Start/End: Original strand, 18870560 - 18870655
Alignment:
Q  37 tttcttgtaactcttttgtaacactttcatcatagtagattgaagggctgctctnnnnnnnagattaggtcatattggaccgaactgggtcaacaat 133  Q
    ||||||||||| |||||||||||||||||| ||| | ||||| || ||||||||       |||||||| |||||||||  ||||||||||||||||    
T  18870560 tttcttgtaacccttttgtaacactttcattatattggattggagagctgctctctcccccagattaggccatattgga-tgaactgggtcaacaat 18870655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 37 - 133
Target Start/End: Complemental strand, 30655744 - 30655650
Alignment:
Q  37 tttcttgtaactcttttgtaacactttcatcatagtagattgaagggctgctctnnnnnnnagattaggtcatattggaccgaactgggtcaacaat 133  Q
    ||||||||||| |||| ||||||||||||||||| ||||||| || ||||||||       |||||||| |||||||| | ||||||||||||||||    
T  30655744 tttcttgtaacccttt-gtaacactttcatcatattagattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaat 30655650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 143 - 242
Target Start/End: Original strand, 19175893 - 19175994
Alignment:
Q  143 tttgttcatgcttgtggtgtttctctacacttagatctaggcctgtttttgttgttgttgtttgaagacacttt----atccattgattaccacttcctt 238  Q
    |||||| |||||||||||||| ||||||||| || |||||| |||  ||||||||||||| ||| |||||||||    ||  ||||||||||||||||||    
T  19175893 tttgtttatgcttgtggtgttgctctacactaag-tctaggtctg-ctttgttgttgttgcttggagacactttacacattaattgattaccacttcctt 19175990  T
Q  239 tgct 242  Q
    ||||    
T  19175991 tgct 19175994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 52 - 149
Target Start/End: Complemental strand, 26287985 - 26287886
Alignment:
Q  52 ttgtaacactttcatcatagtagattgaagggctgctctnnnnnnnagattaggtcatattggaccgaactgggtcaacaa---tgttggtgtgtttgtt 148  Q
    ||||||||||||||||||||| ||||| || ||||||||       |||||||| |||||||| | |||||||||||||||   | ||||||||||||||    
T  26287985 ttgtaacactttcatcatagtggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaatctttttggtgtgtttgtt 26287887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 52 - 149
Target Start/End: Complemental strand, 26301242 - 26301143
Alignment:
Q  52 ttgtaacactttcatcatagtagattgaagggctgctctnnnnnnnagattaggtcatattggaccgaactgggtcaacaa---tgttggtgtgtttgtt 148  Q
    ||||||||||||||||||||| ||||| || ||||||||       |||||||| |||||||| | |||||||||||||||   | ||||||||||||||    
T  26301242 ttgtaacactttcatcatagtggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaatctttttggtgtgtttgtt 26301144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 52 - 149
Target Start/End: Complemental strand, 26313236 - 26313137
Alignment:
Q  52 ttgtaacactttcatcatagtagattgaagggctgctctnnnnnnnagattaggtcatattggaccgaactgggtcaacaa---tgttggtgtgtttgtt 148  Q
    ||||||||||||||||||||| ||||| || ||||||||       |||||||| |||||||| | |||||||||||||||   | ||||||||||||||    
T  26313236 ttgtaacactttcatcatagtggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaatctttttggtgtgtttgtt 26313138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 98 - 149
Target Start/End: Original strand, 15212920 - 15212972
Alignment:
Q  98 agattaggtcatattggaccgaactgggtcaacaat-gttggtgtgtttgttc 149  Q
    |||||||||||  |||||||||||||||||||||||  |||||||||||||||    
T  15212920 agattaggtcaagttggaccgaactgggtcaacaatctttggtgtgtttgttc 15212972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 98 - 149
Target Start/End: Original strand, 43036557 - 43036609
Alignment:
Q  98 agattaggtcatattggaccgaactgggtcaacaat-gttggtgtgtttgttc 149  Q
    |||||||||||  |||||||||||||||||||||||  |||||||||||||||    
T  43036557 agattaggtcaagttggaccgaactgggtcaacaatctttggtgtgtttgttc 43036609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 78
Target Start/End: Complemental strand, 3051233 - 3051178
Alignment:
Q  23 agcttttaagctaatttcttgtaactcttttgtaacactttcatcatagtagattg 78  Q
    |||| ||| |||||||||||||||||| |||||| |||||||||| |||| |||||    
T  3051233 agctcttatgctaatttcttgtaactcatttgtatcactttcatcttagtggattg 3051178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 180 - 239
Target Start/End: Complemental strand, 26301070 - 26301011
Alignment:
Q  180 taggcctgtttttgttgttgttgtttgaagacactttatccattgattaccacttccttt 239  Q
    |||| |||||||||||||||||| |||  |||||||||  ||| ||||||||||||||||    
T  26301070 tagggctgtttttgttgttgttgcttgttgacactttacacatagattaccacttccttt 26301011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 37 - 133
Target Start/End: Complemental strand, 36979475 - 36979381
Alignment:
Q  37 tttcttgtaactcttttgtaacactttcatcatagtagattgaagggctgctctnnnnnnnagattaggtcatattggaccgaactgggtcaacaat 133  Q
    ||||||||||| |||| ||||||||||||||||| | ||||| || ||||||||       |||||||| |||||||| | ||||||||||||||||    
T  36979475 tttcttgtaacccttt-gtaacactttcatcatattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaat 36979381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 73
Target Start/End: Original strand, 5990545 - 5990595
Alignment:
Q  23 agcttttaagctaatttcttgtaactcttttgtaacactttcatcatagta 73  Q
    |||||||||||||||||||||||||   |||||| |||||||||| |||||    
T  5990545 agcttttaagctaatttcttgtaacatctttgtatcactttcatcttagta 5990595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 102 - 148
Target Start/End: Complemental strand, 19491729 - 19491681
Alignment:
Q  102 taggtcatattggaccgaactgggtcaaca--atgttggtgtgtttgtt 148  Q
    ||||||||||||||||||||| ||||||||  || ||||||||||||||    
T  19491729 taggtcatattggaccgaactaggtcaacaatatcttggtgtgtttgtt 19491681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 98 - 149
Target Start/End: Original strand, 4733840 - 4733892
Alignment:
Q  98 agattaggtcatattggaccgaactgggtcaacaat-gttggtgtgtttgttc 149  Q
    |||||||||||  ||||||||||||||||||||| |  |||||||||||||||    
T  4733840 agattaggtcaagttggaccgaactgggtcaacagtctttggtgtgtttgttc 4733892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 98 - 145
Target Start/End: Original strand, 27811412 - 27811460
Alignment:
Q  98 agattaggtcatattggaccgaactgggtcaacaat-gttggtgtgttt 145  Q
    |||||||||||  |||||||||||||||||||||||  |||||||||||    
T  27811412 agattaggtcaagttggaccgaactgggtcaacaatctttggtgtgttt 27811460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 98 - 149
Target Start/End: Original strand, 33352284 - 33352336
Alignment:
Q  98 agattaggtcatattggaccgaactgggtcaacaat-gttggtgtgtttgttc 149  Q
    |||||||||||  |||||||||||||||||||||||  ||| |||||||||||    
T  33352284 agattaggtcaagttggaccgaactgggtcaacaatctttgatgtgtttgttc 33352336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 82; Significance: 8e-39; HSPs: 41)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 16 - 149
Target Start/End: Complemental strand, 10281871 - 10281737
Alignment:
Q  16 ttgtgtaagcttttaagctaatttcttgtaactcttttgtaacactttcatcatagtagattgaagggctgctctnnnnnnnagattaggtcatattgga 115  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||| || ||||||||       |||| |||||||||||||    
T  10281871 ttgtgtaagcttgtaagctaatttcttgtaactcttttgtaacactttcatcatagtggattggagagctgctctctcccccagatcaggtcatattgga 10281772  T
Q  116 ccgaactgggtcaacaat-gttggtgtgtttgttc 149  Q
    ||||||||||||||||||  |||||||||||||||    
T  10281771 ccgaactgggtcaacaatctttggtgtgtttgttc 10281737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 16 - 149
Target Start/End: Original strand, 17003937 - 17004070
Alignment:
Q  16 ttgtgtaagcttttaagctaatttcttgtaactcttttgtaacactttcatcatagtagattgaagggctgctctnnnnnnnagattaggtcatattgga 115  Q
    |||||||||||| |||| |||||| |||||||||||||| || |||||||||||||| |||||||| ||||||||       ||||||||||||||||||    
T  17003937 ttgtgtaagcttgtaagttaattttttgtaactcttttgaaatactttcatcatagtggattgaagagctgctctctcccccagattaggtcatattgga 17004036  T
Q  116 ccgaactgggtcaacaatgttggtgtgtttgttc 149  Q
    |||||||||||||||||| |||||||||||||||    
T  17004037 ccgaactgggtcaacaatcttggtgtgtttgttc 17004070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 16 - 149
Target Start/End: Complemental strand, 19588866 - 19588733
Alignment:
Q  16 ttgtgtaagcttttaagctaatttcttgtaactcttttgtaacactttcatcatagtagattgaagggctgctctnnnnnnnagattaggtcatattgga 115  Q
    |||||||||||| |||| ||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||       ||||||| ||||||||||    
T  19588866 ttgtgtaagcttataaggtaatttcttgtaactcttttgtaacactttcatcatagtggattggagggctgctctctccctaagattagttcatattgga 19588767  T
Q  116 ccgaactgggtcaacaatgttggtgtgtttgttc 149  Q
    |||||||||||||||||| || | ||||||||||    
T  19588766 ccgaactgggtcaacaatctttgagtgtttgttc 19588733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 150 - 242
Target Start/End: Complemental strand, 28832211 - 28832120
Alignment:
Q  150 atgcttgtggtgtttctctacacttagatctaggcctgtttttgttgttgttgtttgaagacactttatccattgattaccacttcctttgct 242  Q
    |||||||||||||| |||||||||||||| |||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  28832211 atgcttgtggtgttgctctacacttagat-taggtctgtttttgttgttgttgcttgaagacactttatccattgattaccacttcctttgct 28832120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 16 - 144
Target Start/End: Complemental strand, 3880419 - 3880291
Alignment:
Q  16 ttgtgtaagcttttaagctaatttcttgtaactcttttgtaacactttcatcatagtagattgaagggctgctctnnnnnnnagattaggtcatattgga 115  Q
    |||||||||||| ||| |||||||||||||||||||||||||||||||||||||||| ||||| || ||||||||       ||||||||||||||||||    
T  3880419 ttgtgtaagcttgtaaactaatttcttgtaactcttttgtaacactttcatcatagtggattggagagctgctctctgcctcagattaggtcatattgga 3880320  T
Q  116 ccgaactgggtcaacaatgttggtgtgtt 144  Q
    | ||||||  |||||||| ||||||||||    
T  3880319 cagaactgaatcaacaatcttggtgtgtt 3880291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 143 - 242
Target Start/End: Complemental strand, 14520188 - 14520089
Alignment:
Q  143 tttgttcatgcttgtggtgtttctctacacttagatctaggcctgtttttgttgttgttgtttgaagacactttatccattgattaccacttcctttgct 242  Q
    |||||| |||||||||||||| ||||||||||||||||||| |||||||||||||||||| ||| ||||||||||  |||||||||||||||||||||||    
T  14520188 tttgtttatgcttgtggtgttgctctacacttagatctaggtctgtttttgttgttgttgcttggagacactttacacattgattaccacttcctttgct 14520089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 16 - 149
Target Start/End: Complemental strand, 14520349 - 14520215
Alignment:
Q  16 ttgtgtaagcttttaagctaatttcttgtaactcttttgtaacactttcatcatagtagattgaagggctgctctnnnnnnnagattaggtcatattgga 115  Q
    ||||||||||||  |||||| |||||||||||||||| ||||||||||||||||||| |||||||| ||||||||       ||||||||||||||||||    
T  14520349 ttgtgtaagcttgcaagctattttcttgtaactcttt-gtaacactttcatcatagtggattgaagagctgctctcccccctagattaggtcatattgga 14520251  T
Q  116 ccgaactgggtcaacaa--tgttggtgtgtttgttc 149  Q
    |||||||||||||||||  | |||||||||||||||    
T  14520250 ccgaactgggtcaacaatcttttggtgtgtttgttc 14520215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 16 - 149
Target Start/End: Original strand, 11916949 - 11917082
Alignment:
Q  16 ttgtgtaagcttttaagctaatttcttgtaactcttttgtaacactttcatcatagtagattgaagggctgctctnnnnnnnagattaggtcatattgga 115  Q
    ||||||||||||  || ||| |||||||||||||||||||||||||||||| ||||| ||||| || ||||||||       | ||||||||||||||||    
T  11916949 ttgtgtaagcttgcaaactattttcttgtaactcttttgtaacactttcattatagtggattggagagctgctctctcccccatattaggtcatattgga 11917048  T
Q  116 ccgaactgggtcaacaatgttggtgtgtttgttc 149  Q
    |||||||||||||||||| | |||||||||||||    
T  11917049 ccgaactgggtcaacaatctcggtgtgtttgttc 11917082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 150 - 242
Target Start/End: Original strand, 24553651 - 24553743
Alignment:
Q  150 atgcttgtggtgtttctctacacttagatctaggcctgtttttgttgttgttgtttgaagacactttatccattgattaccacttcctttgct 242  Q
    ||||||||||||||||||||||||||||| |||| |||||||||||| ||||| ||| ||||||||||||||||||||| |||||||||||||    
T  24553651 atgcttgtggtgtttctctacacttagatttaggtctgtttttgttgatgttgcttggagacactttatccattgattatcacttcctttgct 24553743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 16 - 149
Target Start/End: Original strand, 12084153 - 12084287
Alignment:
Q  16 ttgtgtaagcttttaagctaatttcttgtaactcttttgtaacactttcatcatagtagattgaagggctgctctnnnnnnnagattaggtcatattgga 115  Q
    ||||||||||||||||| |||||||||||||||| |||||||||||||||||||||| ||||| || ||||||||       | ||||||||||| ||||    
T  12084153 ttgtgtaagcttttaagttaatttcttgtaactc-tttgtaacactttcatcatagtggattggagagctgctctctgccccatattaggtcatagtgga 12084251  T
Q  116 ccgaactgggtcaaca--atgttggtgtgtttgttc 149  Q
    ||||||||||||||||  || |||||||||||||||    
T  12084252 ccgaactgggtcaacaatattttggtgtgtttgttc 12084287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 29 - 148
Target Start/End: Complemental strand, 28832365 - 28832247
Alignment:
Q  29 taagctaatttcttgtaactcttttgtaacactttcatcatagtagattgaagggctgctctnnnnnnnagattaggtcatattggaccgaactgggtca 128  Q
    ||||||||||||||||||||| || |||||||||||||| |||| ||||| |||||||||||       |||||||||||||||||||||||| ||||||    
T  28832365 taagctaatttcttgtaactcatt-gtaacactttcatcttagtggattggagggctgctctctcccccagattaggtcatattggaccgaaccgggtca 28832267  T
Q  129 acaatgttggtgtgtttgtt 148  Q
    ||||| ||||||||||||||    
T  28832266 acaatcttggtgtgtttgtt 28832247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 19 - 149
Target Start/End: Original strand, 42127391 - 42127520
Alignment:
Q  19 tgtaagcttttaagctaatttcttgtaactcttttgtaacactttcatcatagtagattgaagggctgctctnnnnnnnagattaggtcatattggaccg 118  Q
    ||||||||| ||||||||||||||||||||| || |||||||||||||| |||| |||||  ||||||||||       ||||||||||||||| || ||    
T  42127391 tgtaagcttataagctaatttcttgtaactcatt-gtaacactttcatcttagtggattggggggctgctctctcccccagattaggtcatattagatcg 42127489  T
Q  119 aactgggtcaacaatgttggtgtgtttgttc 149  Q
    ||||||||||||||| |||||||||||||||    
T  42127490 aactgggtcaacaatcttggtgtgtttgttc 42127520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 16 - 149
Target Start/End: Original strand, 9353310 - 9353444
Alignment:
Q  16 ttgtgtaagcttttaagctaatttcttgtaactcttttgtaacactttcatcatagtagattgaagggctgctctnnnnnnnagattaggtcatattgga 115  Q
    ||||||||||||  |||||  |||||||||||||||| ||||||||||||||||||| ||||| || ||||||||       ||||||||||||||||||    
T  9353310 ttgtgtaagcttgcaagcttttttcttgtaactcttt-gtaacactttcatcatagtggattggagagctgctctctcccccagattaggtcatattgga 9353408  T
Q  116 ccgaactgggtcaacaa--tgttggtgtgtttgttc 149  Q
    |||||||||||||||||  | |||||||||||||||    
T  9353409 ccgaactgggtcaacaatcttttggtgtgtttgttc 9353444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 150 - 242
Target Start/End: Complemental strand, 19588698 - 19588606
Alignment:
Q  150 atgcttgtggtgtttctctacacttagatctaggcctgtttttgttgttgttgtttgaagacactttatccattgattaccacttcctttgct 242  Q
    |||||||||||||| |||||||||||||| |||| || ||||||||||||||| ||| |||| ||||||| ||||||||||||||||||||||    
T  19588698 atgcttgtggtgttgctctacacttagatttaggtctttttttgttgttgttgcttggagacgctttatctattgattaccacttcctttgct 19588606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 37 - 149
Target Start/End: Original strand, 36932349 - 36932462
Alignment:
Q  37 tttcttgtaactcttttgtaacactttcatcatagtagattgaagggctgctctnnnnnnnagattaggtcatattggaccgaactgggtcaacaa--tg 134  Q
    |||||||||||||||| ||||||||||||||||||| ||||| || ||||||||       |||||||||||||||||||||||||||||||||||  |     
T  36932349 tttcttgtaactcttt-gtaacactttcatcatagtggattggagagctgctctctcccccagattaggtcatattggaccgaactgggtcaacaatctt 36932447  T
Q  135 ttggtgtgtttgttc 149  Q
    |||||||||||||||    
T  36932448 ttggtgtgtttgttc 36932462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 150 - 239
Target Start/End: Original strand, 17004105 - 17004193
Alignment:
Q  150 atgcttgtggtgtttctctacacttagatctaggcctgtttttgttgttgttgtttgaagacactttatccattgattaccacttccttt 239  Q
    |||||||||||||| || ||||||||||| |||| |||||||||||||||||| ||| |||||||||||| |||||||||||||||||||    
T  17004105 atgcttgtggtgttgct-tacacttagatttaggtctgtttttgttgttgttgcttggagacactttatctattgattaccacttccttt 17004193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 16 - 148
Target Start/End: Complemental strand, 15464652 - 15464518
Alignment:
Q  16 ttgtgtaagcttttaagctaattt-cttgtaactcttttgtaacactttcatcatagtagattgaagggctgctctnnnnnnnagattaggtcatattgg 114  Q
    ||||||||||||  |||||| ||| ||||||||||||| ||||||||||||||||||| ||||| || ||||||||       ||||||| |||||||||    
T  15464652 ttgtgtaagcttgcaagctatttttcttgtaactcttt-gtaacactttcatcatagtggattggagagctgctctctcccccagattagatcatattgg 15464554  T
Q  115 accgaactgggtcaacaa--tgttggtgtgtttgtt 148  Q
    ||||||||||||||||||  | ||||||||||||||    
T  15464553 accgaactgggtcaacaatcttttggtgtgtttgtt 15464518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 30 - 149
Target Start/End: Original strand, 24553499 - 24553616
Alignment:
Q  30 aagctaatttcttgtaactcttttgtaacactttcatcatagtagattgaagggctgctctnnnnnnnagattaggtcatattggaccgaactgggtcaa 129  Q
    |||||||||||||||||||| || |||||||||||||| |||| || || ||| |||||||       ||||||||||||||||||||||||||| ||||    
T  24553499 aagctaatttcttgtaactcatt-gtaacactttcatcttagtggagtggagg-ctgctctctcccatagattaggtcatattggaccgaactggatcaa 24553596  T
Q  130 caatgttggtgtgtttgttc 149  Q
    |||| |||||||||||||||    
T  24553597 caatcttggtgtgtttgttc 24553616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 150 - 242
Target Start/End: Original strand, 42127555 - 42127646
Alignment:
Q  150 atgcttgtggtgtttctctacacttagatctaggcctgtttttgttgttgttgtttgaagacactttatccattgattaccacttcctttgct 242  Q
    |||||||||||||| ||||||| |||||| || | ||||||| |||||||||| ||| ||||||||||||||||||||||||||| |||||||    
T  42127555 atgcttgtggtgttgctctacaattagatttaagtctgtttt-gttgttgttgcttggagacactttatccattgattaccactttctttgct 42127646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 150 - 239
Target Start/End: Complemental strand, 3880252 - 3880166
Alignment:
Q  150 atgcttgtggtgtttctctacacttagatctaggcctgtttttgttgttgttgtttgaagacactttatccattgattaccacttccttt 239  Q
    |||||||||||||| || ||||||||||| |||| ||||||||||||||| |   ||||||||||||||| |||||||||||||||||||    
T  3880252 atgcttgtggtgttgctttacacttagatttaggtctgtttttgttgttgat---tgaagacactttatctattgattaccacttccttt 3880166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 150 - 242
Target Start/End: Original strand, 9353477 - 9353567
Alignment:
Q  150 atgcttgtggtgtttctctacacttagatctaggcctgtttttgttgttgttgtttgaagacactttatccattgattaccacttcctttgct 242  Q
    |||||||||||||| ||||||||| ||| ||||| |||||||||||||||||| ||| ||||||||||  ||||| |||||||||||||||||    
T  9353477 atgcttgtggtgttgctctacact-aga-ctaggtctgtttttgttgttgttgcttggagacactttacacattgtttaccacttcctttgct 9353567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 2630364 - 2630219
Alignment:
Q  1 attaggttttcctctttgtgtaagcttttaagctaatttcttgtaactcttttgtaacactttcatcatagtagattgaagggctgctctnnnnnnnaga 100  Q
    ||||||||||  |||||||||  | |||||||||||||| ||||||| |||||||| ||||||||||||||| |||||||| |||||| |       | |    
T  2630364 attaggttttgttctttgtgt--gtttttaagctaatttattgtaacccttttgtatcactttcatcatagtggattgaagagctgctatctccctcaaa 2630267  T
Q  101 ttaggtcatattggaccgaactgggtcaacaatgttggtgtgtttgtt 148  Q
      |||||||||||||||||||| ||| |||||| ||| || |||||||    
T  2630266 gcaggtcatattggaccgaactaggttaacaatattgatgcgtttgtt 2630219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 150 - 242
Target Start/End: Original strand, 11181977 - 11182071
Alignment:
Q  150 atgcttgtggtgtttctctacacttagatctaggcctgtttt--tgttgttgttgtttgaagacactttatccattgattaccacttcctttgct 242  Q
    ||||||||||| || |||||||||||||| || | |||||||  ||||||||||| ||| |||||||||||| |||||||||||||| |||||||    
T  11181977 atgcttgtggtattgctctacacttagatttaagtctgtttttttgttgttgttgcttggagacactttatctattgattaccacttactttgct 11182071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 153 - 239
Target Start/End: Complemental strand, 15464480 - 15464396
Alignment:
Q  153 cttgtggtgtttctctacacttagatctaggcctgtttttgttgttgttgtttgaagacactttatccattgattaccacttccttt 239  Q
    ||||||||||| ||||||||| ||| ||||| |||||||||||||||||| ||| ||||||||||  ||||||||||||||||||||    
T  15464480 cttgtggtgttgctctacact-aga-ctaggtctgtttttgttgttgttgcttggagacactttacacattgattaccacttccttt 15464396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 153 - 239
Target Start/End: Original strand, 31300744 - 31300829
Alignment:
Q  153 cttgtggtgtttctctacacttagatctaggcctgtttttgttgttgttgtttgaagacactttatccattgattaccacttccttt 239  Q
    ||||||||||| |||||||||||||| |||| ||||||| |||||| ||| ||||| |||||||||| ||||||||||| |||||||    
T  31300744 cttgtggtgttgctctacacttagatttaggtctgtttt-gttgtttttgcttgaaaacactttatctattgattaccagttccttt 31300829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 145 - 244
Target Start/End: Original strand, 11917112 - 11917214
Alignment:
Q  145 tgttcatgcttgtggtgtttctctacacttagatctaggcctgtttttgttgttgttgtt---tgaagacactttatccattgattaccacttcctttgc 241  Q
    |||| |||||||||||||| ||||||||| ||||||||| || ||||| || || || ||   |||||||||||||  ||||||||||||||||||||||    
T  11917112 tgtttatgcttgtggtgttgctctacactaagatctaggtctttttttttttttttttttgcttgaagacactttacacattgattaccacttcctttgc 11917211  T
Q  242 ttc 244  Q
    |||    
T  11917212 ttc 11917214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 102 - 149
Target Start/End: Original strand, 31300659 - 31300706
Alignment:
Q  102 taggtcatattggaccgaactgggtcaacaatgttggtgtgtttgttc 149  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||    
T  31300659 taggtcatattggaccgaactgggtcaacaatcttggtgtgtttgttc 31300706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 143 - 239
Target Start/End: Original strand, 36932488 - 36932583
Alignment:
Q  143 tttgttcatgcttgtggtgtttctctacacttagatctaggcctgtttt-tgttgttgttgtttgaagacactttatccattgattaccacttccttt 239  Q
    |||||| |||||||||||||| ||||||||| ||| ||||| ||||||| ||||||||||| ||| ||||||||||  ||||||||||| ||||||||    
T  36932488 tttgtttatgcttgtggtgttgctctacact-aga-ctaggtctgttttttgttgttgttgcttggagacactttacacattgattacctcttccttt 36932583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 23 - 151
Target Start/End: Original strand, 11181816 - 11181944
Alignment:
Q  23 agcttttaagctaatttcttgtaactcttttgtaacactttcatcatagtagattgaagggctgctct-nnnnnnnagattaggtcatattggaccgaac 121  Q
    |||||||| |||||||||||||||||| |||||| |||||||||| |||| ||||| |||| ||||||        ||| ||||||||||| ||||||||    
T  11181816 agcttttaggctaatttcttgtaactcatttgtatcactttcatcttagtggattggagggttgctctctccccctagagtaggtcatattagaccgaac 11181915  T
Q  122 tgggtcaacaatgttggtgtgtttgttcat 151  Q
    | |||  || || |||||||||||||||||    
T  11181916 taggt-taccatcttggtgtgtttgttcat 11181944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 150 - 202
Target Start/End: Original strand, 12084321 - 12084373
Alignment:
Q  150 atgcttgtggtgtttctctacacttagatctaggcctgtttttgttgttgttg 202  Q
    |||||||||||||| ||||||||||||||||||| ||||||||||| ||||||    
T  12084321 atgcttgtggtgttgctctacacttagatctaggtctgtttttgtttttgttg 12084373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 155 - 239
Target Start/End: Complemental strand, 38192118 - 38192036
Alignment:
Q  155 tgtggtgtttctctacacttagatctaggcctgtttttgttgttgttgtttgaagacactttatccattgattaccacttccttt 239  Q
    ||||||||| ||||||||| || |||||| |||||||||||||||||| ||| ||||||||||  ||| ||||||||||||||||    
T  38192118 tgtggtgttgctctacact-ag-tctagggctgtttttgttgttgttgcttggagacactttacacatagattaccacttccttt 38192036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 155 - 239
Target Start/End: Complemental strand, 38219343 - 38219261
Alignment:
Q  155 tgtggtgtttctctacacttagatctaggcctgtttttgttgttgttgtttgaagacactttatccattgattaccacttccttt 239  Q
    ||||||||| ||||||||| || |||||| |||||||||||||||||| ||| ||||||||||  ||| ||||||||||||||||    
T  38219343 tgtggtgttgctctacact-ag-tctagggctgtttttgttgttgttgcttggagacactttacacatagattaccacttccttt 38219261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 16 - 149
Target Start/End: Complemental strand, 35387782 - 35387647
Alignment:
Q  16 ttgtgtaagcttttaagctaattt-cttgtaactcttttgtaacactttcatcatagtagattgaagggctgctctnnnnnnnagattaggtcatattgg 114  Q
    ||||||||||||  |||||| ||| |||||||| |||| ||||||||||||||||||||||||| || ||||||||       |||||||| ||||||||    
T  35387782 ttgtgtaagcttgcaagctatttttcttgtaacccttt-gtaacactttcatcatagtagattggagagctgctctctcccccagattaggccatattgg 35387684  T
Q  115 accgaactgggtcaacaa---tgttggtgtgtttgttc 149  Q
     | ||| |||||||||||   | |||||||||||||||    
T  35387683 -ctgaattgggtcaacaatctttttggtgtgtttgttc 35387647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 16 - 149
Target Start/End: Complemental strand, 38192293 - 38192158
Alignment:
Q  16 ttgtgtaagcttttaagctaattt-cttgtaactcttttgtaacactttcatcatagtagattgaagggctgctctnnnnnnnagattaggtcatattgg 114  Q
    ||||||||||||  |||||| ||| |||||||| |||| ||||||||||||||||||| ||||| || ||||||||       |||||||| ||||||||    
T  38192293 ttgtgtaagcttgcaagctatttttcttgtaacccttt-gtaacactttcatcatagtggattggagagctgctctctcccccagattaggccatattgg 38192195  T
Q  115 accgaactgggtcaacaa---tgttggtgtgtttgttc 149  Q
     | |||||||||||||||   | |||||||||||||||    
T  38192194 -ctgaactgggtcaacaatctttttggtgtgtttgttc 38192158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 16 - 149
Target Start/End: Complemental strand, 38219518 - 38219383
Alignment:
Q  16 ttgtgtaagcttttaagctaattt-cttgtaactcttttgtaacactttcatcatagtagattgaagggctgctctnnnnnnnagattaggtcatattgg 114  Q
    ||||||||||||  |||||| ||| |||||||| |||| ||||||||||||||||||| ||||| || ||||||||       |||||||| ||||||||    
T  38219518 ttgtgtaagcttgcaagctatttttcttgtaacccttt-gtaacactttcatcatagtggattggagagctgctctctcccccagattaggccatattgg 38219420  T
Q  115 accgaactgggtcaacaa---tgttggtgtgtttgttc 149  Q
     | |||||||||||||||   | |||||||||||||||    
T  38219419 -ctgaactgggtcaacaatctttttggtgtgtttgttc 38219383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 150 - 244
Target Start/End: Complemental strand, 2630183 - 2630082
Alignment:
Q  150 atgcttgtggtgtttctctacacttagatctaggcct----gtttttgttgttgttgtt---tgaagacactttatccattgattaccacttcctttgct 242  Q
    |||||||||||||| |||| ||||||||| |||||||    ||||||||||||||||||   ||| |  ||||||| ||||| |||| ||||||||||||    
T  2630183 atgcttgtggtgttgctctgcacttagatttaggcctatttgtttttgttgttgttgttgcttgaggctactttattcattgcttactacttcctttgct 2630084  T
Q  243 tc 244  Q
    ||    
T  2630083 tc 2630082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 98 - 148
Target Start/End: Complemental strand, 8565980 - 8565930
Alignment:
Q  98 agattaggtcatattggaccgaactgggtcaacaatgttggtgtgtttgtt 148  Q
    |||||||||||  |||||||||||| |||||||||| ||||||||||||||    
T  8565980 agattaggtcaagttggaccgaactaggtcaacaatcttggtgtgtttgtt 8565930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 98 - 148
Target Start/End: Original strand, 32636958 - 32637009
Alignment:
Q  98 agattaggtcatattggaccgaactgggtcaacaat-gttggtgtgtttgtt 148  Q
    |||||||||||  |||||||||||||||||||||||  ||||||||||||||    
T  32636958 agattaggtcaagttggaccgaactgggtcaacaatctttggtgtgtttgtt 32637009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 153 - 239
Target Start/End: Complemental strand, 35387611 - 35387527
Alignment:
Q  153 cttgtggtgtttctctacacttagatctaggcctgtttttgttgttgttgtttgaagacactttatccattgattaccacttccttt 239  Q
    ||||||| ||| ||||||||| ||| |||||  ||||||||||||||||| ||| ||||||||||  ||| ||||| ||||||||||    
T  35387611 cttgtggagttgctctacact-aga-ctagggttgtttttgttgttgttgcttggagacactttacacatagattatcacttccttt 35387527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 30 - 151
Target Start/End: Complemental strand, 6741958 - 6741836
Alignment:
Q  30 aagctaatttcttgtaactcttttgtaacactttcatcatagtagattgaagggctgctctnnnnnnnagattaggtcatattggaccgaactgggtcaa 129  Q
    |||||||||||||||||||  |||||| ||||| |||| || | ||||| || ||||||||       ||| || ||||||||| ||||||||| || ||    
T  6741958 aagctaatttcttgtaacttctttgtatcacttccatcttaatggattggagagctgctctatcccccagagtatgtcatattgaaccgaactgtgttaa 6741859  T
Q  130 caat-gttggtgtgtttgttcat 151  Q
     |||  |||||||||||||||||    
T  6741858 taatctttggtgtgtttgttcat 6741836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 98 - 149
Target Start/End: Original strand, 19806497 - 19806549
Alignment:
Q  98 agattaggtcatattggaccgaactgggtcaacaat-gttggtgtgtttgttc 149  Q
    |||||||||||  |||||||||||||||||||||||  |||| ||||||||||    
T  19806497 agattaggtcaagttggaccgaactgggtcaacaatctttggggtgtttgttc 19806549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 78; Significance: 2e-36; HSPs: 2)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 16 - 146
Target Start/End: Complemental strand, 17383 - 17253
Alignment:
Q  16 ttgtgtaagcttttaagctaatttcttgtaactcttttgtaacactttcatcatagtagattgaagggctgctctnnnnnnnagattaggtcatattgga 115  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||| | ||||| |||| ||||||       | |||||||||||||| |    
T  17383 ttgtgtaagcttataagctaatttcttgtaactcttttgtaacactttcatcataatggattggagggttgctctctttcccatattaggtcatattgaa 17284  T
Q  116 ccgaactgggtcaacaatgttggtgtgtttg 146  Q
    |||||||||||||||||| ||||||||||||    
T  17283 ccgaactgggtcaacaattttggtgtgtttg 17253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 150 - 242
Target Start/End: Complemental strand, 17215 - 17126
Alignment:
Q  150 atgcttgtggtgtttctctacacttagatctaggcctgtttttgttgttgttgtttgaagacactttatccattgattaccacttcctttgct 242  Q
    |||||||||||||| ||||| |||||||| ||||  ||||||||||||||||   || ||||| |||||| ||||||||||||||||||||||    
T  17215 atgcttgtggtgttgctctatacttagatttaggtatgtttttgttgttgtt---tggagacattttatctattgattaccacttcctttgct 17126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0148 (Bit Score: 77; Significance: 8e-36; HSPs: 2)
Name: scaffold0148
Description:

Target: scaffold0148; HSP #1
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 16 - 149
Target Start/End: Complemental strand, 10849 - 10716
Alignment:
Q  16 ttgtgtaagcttttaagctaatttcttgtaactcttttgtaacactttcatcatagtagattgaagggctgctctnnnnnnnagattaggtcatattgga 115  Q
    |||||||||||| ||| ||||||||||||||||||||||||||||||||||| |||| ||||| || ||||||||       | ||||||||||||||||    
T  10849 ttgtgtaagcttgtaaactaatttcttgtaactcttttgtaacactttcatcttagtggattggagagctgctctctcccccaaattaggtcatattgga 10750  T
Q  116 ccgaactgggtcaacaatgttggtgtgtttgttc 149  Q
    |||||||||||||| ||| |||||||||||||||    
T  10749 ccgaactgggtcaataatcttggtgtgtttgttc 10716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0148; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 150 - 235
Target Start/End: Complemental strand, 10681 - 10595
Alignment:
Q  150 atgcttgtggtgtttctctacacttagatctaggcctg-tttttgttgttgttgtttgaagacactttatccattgattaccacttc 235  Q
    |||||||||||||| |||||||||||||| |||| ||| ||||||||||||||| ||| ||  |||||||| || ||||||||||||    
T  10681 atgcttgtggtgttgctctacacttagatttaggtctgttttttgttgttgttgcttggagtaactttatctatcgattaccacttc 10595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 69; Significance: 5e-31; HSPs: 2)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 16 - 149
Target Start/End: Complemental strand, 85802 - 85670
Alignment:
Q  16 ttgtgtaagcttttaagctaatttcttgtaactcttttgtaacactttcatcatagtagattgaagggctgctctnnnnnnnagattaggtcatattgga 115  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||| || ||||| || || |||||       ||||||||||||||||||    
T  85802 ttgtgtaagcttttaagctaatttcttgtaactc-tttgtaacactttcatcatggtggattggagagccgctctctcccccagattaggtcatattgga 85704  T
Q  116 ccgaactgggtcaacaatgttggtgtgtttgttc 149  Q
    | |||||||||||||||| | | |||||||||||    
T  85703 ctgaactgggtcaacaatctagatgtgtttgttc 85670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 150 - 242
Target Start/End: Complemental strand, 85636 - 85545
Alignment:
Q  150 atgcttgtggtgtttctctacacttagatctaggcctgtttttgttgttgttgtttgaagacactttatccattgattaccacttcctttgct 242  Q
    ||||||||| |||| ||||||||||||||||||| |||||||  ||||||||| ||| ||||||||||  |||||||||||||||||||||||    
T  85636 atgcttgtgatgttgctctacacttagatctaggtctgtttta-ttgttgttgcttggagacactttacacattgattaccacttcctttgct 85545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0140 (Bit Score: 60; Significance: 1e-25; HSPs: 2)
Name: scaffold0140
Description:

Target: scaffold0140; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 16 - 148
Target Start/End: Original strand, 8396 - 8530
Alignment:
Q  16 ttgtgtaagcttttaagctaattt-cttgtaactcttttgtaacactttcatcatagtagattgaagggctgctctnnnnnnnagattaggtcatattgg 114  Q
    ||||||||||||  |||||| ||| ||||||||||||| ||||||||||||||||||| ||||| || ||||||||       |||||||||||||||||    
T  8396 ttgtgtaagcttgcaagctatttttcttgtaactcttt-gtaacactttcatcatagtggattggagagctgctctctcccccagattaggtcatattgg 8494  T
Q  115 accgaactgggtcaacaa--tgttggtgtgtttgtt 148  Q
    ||||||||||||||||||  | ||||||||||||||    
T  8495 accgaactgggtcaacaatcttttggtgtgtttgtt 8530  T

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Target: scaffold0140; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 153 - 239
Target Start/End: Original strand, 8568 - 8653
Alignment:
Q  153 cttgtggtgtttctctacacttagatctaggcctgtttt-tgttgttgttgtttgaagacactttatccattgattaccacttccttt 239  Q
    ||||||||||| ||||||||| ||| ||||| ||||||| ||||||| ||| ||| ||||||||||  ||||||||||||||||||||    
T  8568 cttgtggtgttgctctacact-aga-ctaggtctgttttttgttgttattgcttggagacactttacacattgattaccacttccttt 8653  T

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Target: scaffold0087 (Bit Score: 60; Significance: 1e-25; HSPs: 4)
Name: scaffold0087
Description:

Target: scaffold0087; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 16 - 149
Target Start/End: Original strand, 36810 - 36944
Alignment:
Q  16 ttgtgtaagcttttaagctaatttcttgtaactcttttgtaacactttcatcatagtagattgaagggctgctctnnnnnnnagattaggtcatattgga 115  Q
    ||||||||||||  |||||| |||||||||||||||| ||||||||||||||||||| | |||  | ||||||||       ||||||||||||||||||    
T  36810 ttgtgtaagcttgcaagctattttcttgtaactcttt-gtaacactttcatcatagtgggttggcgagctgctctcttccctagattaggtcatattgga 36908  T
Q  116 ccgaactgggtcaacaa--tgttggtgtgtttgttc 149  Q
    |||||||||||||||||  | |||||||||||||||    
T  36909 ccgaactgggtcaacaatcttttggtgtgtttgttc 36944  T

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Target: scaffold0087; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 16 - 149
Target Start/End: Original strand, 43939 - 44073
Alignment:
Q  16 ttgtgtaagcttttaagctaatttcttgtaactcttttgtaacactttcatcatagtagattgaagggctgctctnnnnnnnagattaggtcatattgga 115  Q
    |||| |||||||  |||||| |||||||||||||||| ||||||||||||||||||| ||||| || ||||||||       ||| ||| ||||||||||    
T  43939 ttgtataagcttgcaagctattttcttgtaactcttt-gtaacactttcatcatagtggattggagagctgctctctcccccagaatagatcatattgga 44037  T
Q  116 ccgaactgggtcaacaa--tgttggtgtgtttgttc 149  Q
    |||||||||||||||||  | |||||||||||||||    
T  44038 ccgaactgggtcaacaatcttttggtgtgtttgttc 44073  T

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Target: scaffold0087; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 143 - 242
Target Start/End: Original strand, 44099 - 44196
Alignment:
Q  143 tttgttcatgcttgtggtgtttctctacacttagatctaggcctgtttttgttgttgttgtttgaagacactttatccattgattaccacttcctttgct 242  Q
    |||||| |||||||||||||| ||||||||| |||| |||| |||||||||||||||||| ||| ||||||||||  |||||||||||||||||||||||    
T  44099 tttgtttatgcttgtggtgttgctctacact-agat-taggtctgtttttgttgttgttgcttggagacactttacacattgattaccacttcctttgct 44196  T

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Target: scaffold0087; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 143 - 242
Target Start/End: Original strand, 36971 - 37069
Alignment:
Q  143 tttgttcatgcttgtggtgtttctctacacttagatctaggcctgtttttgttgttgttgtttgaagacactttatccattgattaccacttcctttgct 242  Q
    |||||| || |||||||||||  |||||||  || |||||| |||||||||||||||||| ||| ||||||||||  |||||||||||||||||||||||    
T  36971 tttgtttatacttgtggtgttggtctacaccaag-tctaggtctgtttttgttgttgttgcttggagacactttacacattgattaccacttcctttgct 37069  T

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Target: scaffold1805 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold1805
Description:

Target: scaffold1805; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 165 - 242
Target Start/End: Complemental strand, 1344 - 1268
Alignment:
Q  165 ctctacacttagatctaggcctgtttttgttgttgttgtttgaagacactttatccattgattaccacttcctttgct 242  Q
    ||||||||| || |||||| |||||||||||||||||| ||| ||||||||||  |||||||||||||||||||||||    
T  1344 ctctacactaag-tctaggtctgtttttgttgttgttgcttggagacactttacacattgattaccacttcctttgct 1268  T

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Target: scaffold0098 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 2)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 52 - 151
Target Start/End: Complemental strand, 45337 - 45236
Alignment:
Q  52 ttgtaacactttcatcatagtagattgaagggctgctctnnnnnnnagattaggtcatattggaccgaactgggtcaacaa--tgttggtgtgtttgttc 149  Q
    ||||||| ||||||||||||| ||||| || ||||||||       |||||||||||||||| ||||||||| ||||||||  | |||||||||||||||    
T  45337 ttgtaacgctttcatcatagtggattggagagctgctctctcccccagattaggtcatattgaaccgaactgagtcaacaatcttttggtgtgtttgttc 45238  T
Q  150 at 151  Q
    ||    
T  45237 at 45236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 154 - 242
Target Start/End: Complemental strand, 45201 - 45115
Alignment:
Q  154 ttgtggtgtttctctacacttagatctaggcctgtttttgttgttgttgtttgaagacactttatccattgattaccacttcctttgct 242  Q
    |||||||||| ||||||||| ||| || || |||||||||||||||||| ||| ||||||||||  |||||||||||||||| ||||||    
T  45201 ttgtggtgttgctctacact-aga-cttggtctgtttttgttgttgttgcttggagacactttacacattgattaccacttcatttgct 45115  T

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Target: scaffold0188 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 4)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 16 - 149
Target Start/End: Original strand, 17929 - 18064
Alignment:
Q  16 ttgtgtaagcttttaagctaattt-cttgtaactcttttgtaacactttcatcatagtagattgaagggctgctctnnnnnnnagattaggtcatattgg 114  Q
    ||||||||||||  |||||| ||| |||||||| |||| ||||||||||||||||||| ||||| || ||||||||       |||||||| ||||||||    
T  17929 ttgtgtaagcttgcaagctatttttcttgtaacccttt-gtaacactttcatcatagtggattggagagctgctctctcccccagattaggccatattgg 18027  T
Q  115 accgaactgggtcaacaa---tgttggtgtgtttgttc 149  Q
     | |||||||||||||||   | |||||||||||||||    
T  18028 -ctgaactgggtcaacaatctttttggtgtgtttgttc 18064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 16 - 149
Target Start/End: Original strand, 24022 - 24157
Alignment:
Q  16 ttgtgtaagcttttaagctaattt-cttgtaactcttttgtaacactttcatcatagtagattgaagggctgctctnnnnnnnagattaggtcatattgg 114  Q
    ||||||||||||  |||||| ||| |||||||| |||| ||||||||||||||||||| ||||| || ||||||||       |||||||| ||||||||    
T  24022 ttgtgtaagcttgcaagctatttttcttgtaacccttt-gtaacactttcatcatagtggattggagagctgctctctcccccagattaggccatattgg 24120  T
Q  115 accgaactgggtcaacaa---tgttggtgtgtttgttc 149  Q
     | |||||||||||||||   | |||||||||||||||    
T  24121 -ctgaactgggtcaacaatctttttggtgtgtttgttc 24157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 153 - 239
Target Start/End: Original strand, 18100 - 18185
Alignment:
Q  153 cttgtggtgtttctctacacttagatctaggcctg-tttttgttgttgttgtttgaagacactttatccattgattaccacttccttt 239  Q
    ||||||||||| ||||||||| || |||||| ||| ||||||||||||||| ||| ||||||||||  ||| ||||||||||||||||    
T  18100 cttgtggtgttgctctacact-ag-tctagggctggtttttgttgttgttgcttggagacactttacacatagattaccacttccttt 18185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 153 - 239
Target Start/End: Original strand, 24193 - 24278
Alignment:
Q  153 cttgtggtgtttctctacacttagatctaggcctg-tttttgttgttgttgtttgaagacactttatccattgattaccacttccttt 239  Q
    ||||||||||| ||||||||| || |||||| ||| ||||||||||||||| ||| ||||||||||  ||| ||||||||||||||||    
T  24193 cttgtggtgttgctctacact-ag-tctagggctggtttttgttgttgttgcttggagacactttacacatagattaccacttccttt 24278  T

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Target: scaffold0184 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 186 - 244
Target Start/End: Original strand, 29671 - 29729
Alignment:
Q  186 tgtttttgttgttgttgtttgaagacactttatccattgattaccacttcctttgcttc 244  Q
    |||| |||||||||||| |||| || ||||||  |||||||||||||||||||||||||    
T  29671 tgttgttgttgttgttggttgaggatactttactcattgattaccacttcctttgcttc 29729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 35; Significance: 0.00000000009; HSPs: 2)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 186 - 244
Target Start/End: Complemental strand, 43173 - 43115
Alignment:
Q  186 tgtttttgttgttgttgtttgaagacactttatccattgattaccacttcctttgcttc 244  Q
    |||| |||||||||||| |||| || ||||||  |||||||||||||||||||||||||    
T  43173 tgttgttgttgttgttggttgaggatactttactcattgattaccacttcctttgcttc 43115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 242
Target Start/End: Complemental strand, 23481 - 23390
Alignment:
Q  150 atgcttgtggtgtttctctacacttagatctaggcctgtttttgttgttgttgtttgaagacactttatccattgattaccacttcctttgct 242  Q
    |||||||||||||| || ||||||||| | ||   ||| |||||||||| ||| |||| || | ||||  |||||||||||||||||||||||    
T  23481 atgcttgtggtgttgctttacacttagttttataactg-ttttgttgttattgcttgaggatattttactcattgattaccacttcctttgct 23390  T

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Target: scaffold0066 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 98 - 149
Target Start/End: Complemental strand, 20449 - 20397
Alignment:
Q  98 agattaggtcatattggaccgaactgggtcaacaa-tgttggtgtgtttgttc 149  Q
    |||||||||||  |||||||||||||||||||||| | |||||||||||||||    
T  20449 agattaggtcaagttggaccgaactgggtcaacaatttttggtgtgtttgttc 20397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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