View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4302_low_6 (Length: 433)

Name: NF4302_low_6
Description: NF4302
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4302_low_6
NF4302_low_6
[»] chr3 (81 HSPs)
chr3 (163-392)||(43253815-43254045)
chr3 (166-376)||(37311886-37312097)
chr3 (174-374)||(37695635-37695837)
chr3 (163-376)||(36460384-36460597)
chr3 (163-368)||(10366618-10366830)
chr3 (163-369)||(30190635-30190841)
chr3 (163-366)||(37497425-37497629)
chr3 (163-369)||(19822945-19823151)
chr3 (218-391)||(1778632-1778804)
chr3 (214-369)||(8679029-8679184)
chr3 (215-374)||(11632067-11632225)
chr3 (163-364)||(36476518-36476719)
chr3 (163-367)||(44301495-44301700)
chr3 (163-386)||(27471269-27471492)
chr3 (227-376)||(23004351-23004499)
chr3 (218-369)||(29023941-29024091)
chr3 (163-374)||(38795278-38795489)
chr3 (215-376)||(30711059-30711220)
chr3 (163-365)||(37772943-37773147)
chr3 (215-385)||(12736531-12736701)
chr3 (218-376)||(3313243-3313397)
chr3 (230-369)||(24569075-24569214)
chr3 (163-369)||(51837934-51838141)
chr3 (163-374)||(17652687-17652893)
chr3 (163-345)||(54726419-54726601)
chr3 (216-363)||(34750483-34750630)
chr3 (227-374)||(45710848-45710995)
chr3 (228-366)||(11905821-11905959)
chr3 (164-374)||(38137413-38137626)
chr3 (219-364)||(28690762-28690907)
chr3 (167-326)||(39043772-39043932)
chr3 (163-374)||(53560150-53560362)
chr3 (163-374)||(34957438-34957648)
chr3 (218-368)||(14194545-14194694)
chr3 (218-369)||(5322914-5323063)
chr3 (163-342)||(3901151-3901330)
chr3 (227-345)||(52290891-52291009)
chr3 (228-356)||(19611908-19612035)
chr3 (234-374)||(43719272-43719411)
chr3 (163-374)||(31158492-31158691)
chr3 (302-376)||(33491051-33491125)
chr3 (216-372)||(49447766-49447919)
chr3 (218-366)||(19609288-19609436)
chr3 (222-342)||(30682068-30682188)
chr3 (262-369)||(49830162-49830270)
chr3 (214-336)||(12904849-12904972)
chr3 (239-350)||(54477454-54477564)
chr3 (167-374)||(23068137-23068345)
chr3 (262-391)||(50035170-50035299)
chr3 (163-295)||(33491408-33491542)
chr3 (228-345)||(36462945-36463062)
chr3 (222-319)||(38705168-38705267)
chr3 (166-306)||(27549323-27549464)
chr3 (298-391)||(51064771-51064864)
chr3 (228-369)||(26467108-26467250)
chr3 (166-279)||(41038458-41038571)
chr3 (216-329)||(24245109-24245221)
chr3 (259-341)||(27151521-27151605)
chr3 (215-336)||(38512011-38512132)
chr3 (256-345)||(39931656-39931745)
chr3 (163-276)||(40462255-40462366)
chr3 (228-279)||(41351629-41351680)
chr3 (235-374)||(48540970-48541109)
chr3 (344-377)||(32070912-32070945)
chr3 (214-279)||(40194488-40194553)
chr3 (301-342)||(45811727-45811768)
chr3 (217-266)||(50036510-50036559)
chr3 (166-259)||(24703599-24703692)
chr3 (214-281)||(1018922-1018989)
chr3 (13-52)||(3985645-3985684)
chr3 (163-206)||(30710583-30710626)
chr3 (227-364)||(30861392-30861529)
chr3 (233-292)||(37804839-37804898)
chr3 (13-80)||(41380614-41380681)
chr3 (163-202)||(45710783-45710822)
chr3 (252-350)||(10973559-10973657)
chr3 (13-79)||(14170146-14170212)
chr3 (164-194)||(24569246-24569276)
chr3 (285-355)||(52206836-52206906)
chr3 (301-342)||(7757599-7757640)
chr3 (259-340)||(42278695-42278776)
[»] chr7 (86 HSPs)
chr7 (163-376)||(11373403-11373616)
chr7 (163-376)||(41506041-41506253)
chr7 (163-374)||(83325-83537)
chr7 (163-374)||(759068-759279)
chr7 (163-374)||(34947441-34947652)
chr7 (163-376)||(21350603-21350814)
chr7 (164-374)||(2459413-2459621)
chr7 (163-392)||(23670426-23670655)
chr7 (163-391)||(28103671-28103902)
chr7 (166-376)||(34100522-34100732)
chr7 (163-376)||(8592415-8592628)
chr7 (167-370)||(24516270-24516473)
chr7 (163-368)||(21390235-21390441)
chr7 (163-369)||(21759966-21760172)
chr7 (163-374)||(28202286-28202497)
chr7 (166-369)||(3178186-3178391)
chr7 (163-374)||(9785929-9786140)
chr7 (164-386)||(7457386-7457607)
chr7 (218-366)||(38391744-38391892)
chr7 (163-374)||(40076259-40076467)
chr7 (163-374)||(7463153-7463365)
chr7 (163-374)||(42935599-42935813)
chr7 (163-364)||(37245631-37245834)
chr7 (163-375)||(19271709-19271920)
chr7 (214-376)||(22738693-22738855)
chr7 (163-345)||(43873864-43874046)
chr7 (214-374)||(46478270-46478430)
chr7 (214-376)||(5524369-5524534)
chr7 (163-369)||(48608808-48609009)
chr7 (163-374)||(27920927-27921140)
chr7 (214-369)||(26974018-26974176)
chr7 (164-346)||(33819154-33819338)
chr7 (242-374)||(16560547-16560679)
chr7 (242-374)||(16604983-16605115)
chr7 (214-375)||(29835390-29835550)
chr7 (228-365)||(30865973-30866110)
chr7 (163-369)||(32346034-32346240)
chr7 (228-374)||(13961965-13962111)
chr7 (214-374)||(16904371-16904531)
chr7 (224-369)||(31930479-31930626)
chr7 (163-301)||(25571361-25571498)
chr7 (266-374)||(46211472-46211583)
chr7 (218-322)||(6494963-6495067)
chr7 (218-363)||(49101659-49101807)
chr7 (214-342)||(32018924-32019053)
chr7 (163-374)||(44424086-44424287)
chr7 (262-371)||(12631345-12631454)
chr7 (228-369)||(17828334-17828473)
chr7 (285-374)||(44180268-44180357)
chr7 (214-374)||(32018689-32018849)
chr7 (163-276)||(47045546-47045653)
chr7 (163-291)||(36790679-36790809)
chr7 (227-308)||(42796010-42796094)
chr7 (261-369)||(2850863-2850971)
chr7 (168-342)||(21937796-21937970)
chr7 (166-311)||(24166934-24167080)
chr7 (230-330)||(35333051-35333151)
chr7 (221-293)||(30546413-30546485)
chr7 (226-336)||(31665731-31665842)
chr7 (234-337)||(39005433-39005536)
chr7 (215-277)||(4958674-4958736)
chr7 (215-336)||(37850744-37850863)
chr7 (268-374)||(39452390-39452495)
chr7 (252-341)||(29121533-29121622)
chr7 (218-374)||(19060378-19060529)
chr7 (13-77)||(29780352-29780416)
chr7 (266-338)||(47045467-47045538)
chr7 (219-254)||(29198777-29198812)
chr7 (254-344)||(14063348-14063438)
chr7 (254-344)||(14373376-14373466)
chr7 (166-269)||(37490319-37490422)
chr7 (252-345)||(7930083-7930176)
chr7 (284-345)||(27556975-27557036)
chr7 (286-334)||(15464742-15464790)
chr7 (288-331)||(17609350-17609393)
chr7 (288-331)||(17609593-17609636)
chr7 (288-331)||(17609836-17609879)
chr7 (288-331)||(17610079-17610122)
chr7 (288-331)||(17610322-17610365)
chr7 (16-79)||(28909923-28909986)
chr7 (329-375)||(34635958-34636004)
chr7 (233-278)||(17610913-17610958)
chr7 (271-336)||(25531005-25531070)
chr7 (216-269)||(37490457-37490510)
chr7 (252-336)||(762187-762271)
chr7 (219-295)||(46602047-46602123)
[»] chr1 (96 HSPs)
chr1 (163-376)||(12039016-12039229)
chr1 (163-369)||(39864045-39864251)
chr1 (115-391)||(24991609-24991886)
chr1 (163-376)||(23168964-23169175)
chr1 (164-391)||(28748926-28749153)
chr1 (163-374)||(49223959-49224170)
chr1 (164-374)||(40144820-40145030)
chr1 (214-376)||(9307612-9307774)
chr1 (163-345)||(20209842-20210024)
chr1 (163-367)||(26093328-26093532)
chr1 (163-391)||(31042731-31042959)
chr1 (163-366)||(37506058-37506264)
chr1 (214-375)||(6023621-6023782)
chr1 (163-369)||(16395025-16395229)
chr1 (163-369)||(33733241-33733446)
chr1 (218-342)||(36701910-36702034)
chr1 (218-342)||(36718014-36718138)
chr1 (218-352)||(37276450-37276584)
chr1 (163-384)||(14757554-14757777)
chr1 (222-374)||(15699115-15699268)
chr1 (218-374)||(38787330-38787486)
chr1 (218-369)||(30754919-30755070)
chr1 (164-357)||(7759150-7759343)
chr1 (166-363)||(13579605-13579801)
chr1 (218-366)||(21909987-21910133)
chr1 (163-296)||(35367736-35367869)
chr1 (190-374)||(44707733-44707917)
chr1 (163-277)||(6785190-6785304)
chr1 (169-374)||(32825965-32826171)
chr1 (218-369)||(917013-917164)
chr1 (218-364)||(34031510-34031656)
chr1 (166-369)||(2572405-2572608)
chr1 (166-366)||(52429279-52429481)
chr1 (218-382)||(4441568-4441732)
chr1 (228-346)||(10495838-10495955)
chr1 (218-374)||(6160432-6160588)
chr1 (230-361)||(24880874-24881008)
chr1 (164-369)||(31978630-31978832)
chr1 (163-374)||(41121795-41122007)
chr1 (219-342)||(8896337-8896460)
chr1 (166-374)||(45331276-45331486)
chr1 (166-352)||(9379169-9379355)
chr1 (218-374)||(11449875-11450028)
chr1 (228-374)||(42409993-42410139)
chr1 (215-374)||(22856217-22856369)
chr1 (220-368)||(5179378-5179526)
chr1 (166-356)||(27721470-27721658)
chr1 (166-374)||(3260529-3260732)
chr1 (218-336)||(44761542-44761660)
chr1 (248-376)||(12151195-12151323)
chr1 (163-356)||(35682796-35682977)
chr1 (221-336)||(31154120-31154235)
chr1 (218-328)||(7351625-7351735)
chr1 (285-374)||(6267829-6267918)
chr1 (284-369)||(43500762-43500847)
chr1 (221-295)||(25089137-25089212)
chr1 (230-336)||(29074885-29074991)
chr1 (166-374)||(3312056-3312256)
chr1 (163-282)||(4659711-4659829)
chr1 (214-276)||(37539112-37539174)
chr1 (163-276)||(26256159-26256272)
chr1 (216-356)||(27896942-27897082)
chr1 (214-318)||(29778425-29778529)
chr1 (286-368)||(27687298-27687380)
chr1 (285-342)||(43614453-43614510)
chr1 (298-369)||(35367622-35367694)
chr1 (231-346)||(32970568-32970683)
chr1 (164-279)||(39887769-39887885)
chr1 (243-336)||(6365645-6365738)
chr1 (264-345)||(22181371-22181452)
chr1 (217-342)||(26257945-26258070)
chr1 (215-336)||(41080586-41080705)
chr1 (285-345)||(15444483-15444543)
chr1 (215-279)||(37177822-37177886)
chr1 (231-314)||(32219694-32219777)
chr1 (255-358)||(45615557-45615660)
chr1 (264-370)||(51028470-51028576)
chr1 (264-367)||(35538678-35538781)
chr1 (255-345)||(11642196-11642281)
chr1 (163-269)||(17988823-17988929)
chr1 (264-350)||(44122248-44122336)
chr1 (249-337)||(34688857-34688945)
chr1 (249-337)||(34693385-34693473)
chr1 (249-336)||(44426746-44426836)
chr1 (228-279)||(2137437-2137488)
chr1 (167-277)||(9412873-9412982)
chr1 (253-333)||(17988572-17988654)
chr1 (249-331)||(15057450-15057531)
chr1 (229-279)||(15904751-15904801)
chr1 (311-373)||(26255970-26256032)
chr1 (218-279)||(52837269-52837330)
chr1 (301-337)||(20356083-20356119)
chr1 (301-337)||(20554787-20554823)
chr1 (215-267)||(24500058-24500110)
chr1 (218-258)||(35538644-35538684)
chr1 (252-344)||(49176940-49177032)
[»] chr5 (62 HSPs)
chr5 (164-391)||(40530175-40530403)
chr5 (163-391)||(4818484-4818713)
chr5 (163-391)||(8698242-8698471)
chr5 (163-374)||(40899852-40900063)
chr5 (215-376)||(29570378-29570539)
chr5 (163-376)||(41496014-41496227)
chr5 (163-367)||(27542729-27542933)
chr5 (163-369)||(6315750-6315956)
chr5 (164-369)||(6753632-6753836)
chr5 (163-372)||(15818450-15818661)
chr5 (163-369)||(1248577-1248783)
chr5 (164-376)||(31654987-31655200)
chr5 (165-361)||(19929882-19930078)
chr5 (218-364)||(8724987-8725133)
chr5 (163-356)||(6615866-6616059)
chr5 (164-386)||(9515668-9515903)
chr5 (166-366)||(7827902-7828102)
chr5 (163-364)||(42803598-42803799)
chr5 (167-374)||(21060569-21060775)
chr5 (216-369)||(2232046-2232195)
chr5 (163-361)||(6753963-6754160)
chr5 (215-376)||(22848350-22848511)
chr5 (163-363)||(27580540-27580735)
chr5 (215-376)||(29374328-29374489)
chr5 (214-374)||(11796135-11796295)
chr5 (217-374)||(41492290-41492447)
chr5 (163-374)||(2588036-2588242)
chr5 (217-374)||(41478815-41478972)
chr5 (216-336)||(4441008-4441128)
chr5 (218-362)||(15439299-15439442)
chr5 (163-341)||(41062161-41062338)
chr5 (163-345)||(3348122-3348309)
chr5 (248-366)||(29856066-29856182)
chr5 (227-369)||(30512658-30512801)
chr5 (227-369)||(30552998-30553141)
chr5 (228-363)||(37184058-37184193)
chr5 (263-374)||(38508155-38508266)
chr5 (228-353)||(18841478-18841603)
chr5 (262-391)||(32440174-32440303)
chr5 (214-328)||(11761313-11761426)
chr5 (214-369)||(11904190-11904346)
chr5 (228-336)||(26285484-26285592)
chr5 (301-391)||(843509-843599)
chr5 (316-386)||(31747969-31748039)
chr5 (228-369)||(39325862-39326001)
chr5 (315-369)||(42922840-42922894)
chr5 (241-374)||(5282354-5282487)
chr5 (239-369)||(38161389-38161515)
chr5 (261-346)||(5731808-5731893)
chr5 (218-273)||(37101274-37101329)
chr5 (298-356)||(3076659-3076716)
chr5 (285-342)||(18890555-18890612)
chr5 (285-344)||(9637875-9637934)
chr5 (311-357)||(29222201-29222247)
chr5 (164-206)||(29374128-29374170)
chr5 (13-79)||(37995781-37995847)
chr5 (252-345)||(39213369-39213465)
chr5 (215-257)||(41480137-41480179)
chr5 (214-259)||(32439857-32439902)
chr5 (216-257)||(41478772-41478813)
chr5 (227-259)||(3076622-3076654)
chr5 (217-257)||(41480181-41480221)
[»] chr2 (71 HSPs)
chr2 (163-376)||(35313821-35314035)
chr2 (163-391)||(5789599-5789826)
chr2 (164-376)||(8947018-8947232)
chr2 (163-374)||(16463621-16463834)
chr2 (163-374)||(45235513-45235726)
chr2 (163-374)||(36794218-36794429)
chr2 (163-376)||(3323252-3323451)
chr2 (163-369)||(37322363-37322569)
chr2 (163-374)||(25637414-25637625)
chr2 (163-374)||(39785519-39785733)
chr2 (166-369)||(43410363-43410566)
chr2 (163-369)||(14523345-14523551)
chr2 (166-364)||(34225527-34225725)
chr2 (163-374)||(36354411-36354621)
chr2 (215-376)||(16377622-16377787)
chr2 (163-346)||(34120435-34120616)
chr2 (227-369)||(31448666-31448808)
chr2 (178-361)||(35242278-35242461)
chr2 (163-366)||(17695262-17695467)
chr2 (163-374)||(15359055-15359268)
chr2 (218-366)||(39691479-39691627)
chr2 (227-369)||(16805879-16806021)
chr2 (227-369)||(16845160-16845302)
chr2 (163-350)||(9458263-9458444)
chr2 (176-369)||(43115775-43115968)
chr2 (222-374)||(11742497-11742648)
chr2 (285-369)||(19937733-19937817)
chr2 (228-374)||(39329629-39329777)
chr2 (227-374)||(18853168-18853316)
chr2 (248-337)||(19426474-19426564)
chr2 (166-277)||(5272204-5272314)
chr2 (215-336)||(28170589-28170710)
chr2 (216-336)||(43730603-43730720)
chr2 (215-349)||(43699592-43699723)
chr2 (228-313)||(32831204-32831289)
chr2 (305-374)||(39443789-39443858)
chr2 (163-271)||(7494909-7495018)
chr2 (163-364)||(28186148-28186348)
chr2 (164-279)||(26863421-26863539)
chr2 (298-385)||(27501495-27501582)
chr2 (228-346)||(17346359-17346476)
chr2 (302-364)||(26607946-26608008)
chr2 (264-336)||(1206709-1206781)
chr2 (269-345)||(32783404-32783480)
chr2 (230-334)||(41220954-41221058)
chr2 (166-317)||(19444083-19444234)
chr2 (251-345)||(31976370-31976464)
chr2 (218-279)||(19937374-19937435)
chr2 (228-336)||(43730431-43730537)
chr2 (214-277)||(7438917-7438980)
chr2 (301-360)||(12520832-12520891)
chr2 (218-281)||(17122973-17123036)
chr2 (252-342)||(26337122-26337211)
chr2 (228-322)||(38187903-38187997)
chr2 (216-333)||(36173351-36173463)
chr2 (325-376)||(7438872-7438923)
chr2 (269-368)||(10005099-10005197)
chr2 (252-323)||(33406993-33407064)
chr2 (13-79)||(25441587-25441653)
chr2 (218-307)||(26608178-26608267)
chr2 (218-258)||(1206775-1206815)
chr2 (228-276)||(18202104-18202152)
chr2 (264-352)||(27866527-27866614)
chr2 (163-336)||(34451341-34451511)
chr2 (285-345)||(38763604-38763664)
chr2 (216-264)||(45464009-45464057)
chr2 (271-334)||(11367121-11367184)
chr2 (163-206)||(34120657-34120700)
chr2 (167-205)||(8928547-8928585)
chr2 (261-309)||(3601416-3601464)
chr2 (23-79)||(30166236-30166292)
[»] chr8 (83 HSPs)
chr8 (163-391)||(39482546-39482777)
chr8 (115-385)||(21216061-21216330)
chr8 (163-366)||(34948666-34948867)
chr8 (164-374)||(45425637-45425848)
chr8 (163-366)||(13335151-13335353)
chr8 (163-339)||(44761500-44761674)
chr8 (163-364)||(9300094-9300297)
chr8 (167-374)||(17719229-17719436)
chr8 (163-366)||(22771814-22772017)
chr8 (166-391)||(11976890-11977115)
chr8 (164-376)||(39405697-39405909)
chr8 (166-369)||(10179923-10180126)
chr8 (163-342)||(5053156-5053334)
chr8 (218-376)||(31082608-31082766)
chr8 (252-373)||(1875564-1875685)
chr8 (163-369)||(26626088-26626294)
chr8 (166-345)||(31231667-31231846)
chr8 (166-374)||(34393925-34394137)
chr8 (163-342)||(4428354-4428531)
chr8 (221-369)||(31271013-31271161)
chr8 (214-369)||(7172899-7173054)
chr8 (227-366)||(40996344-40996483)
chr8 (163-369)||(17823856-17824060)
chr8 (220-368)||(32476278-32476426)
chr8 (166-363)||(14854916-14855115)
chr8 (228-374)||(10097962-10098108)
chr8 (166-345)||(396611-396790)
chr8 (219-333)||(42886990-42887104)
chr8 (167-345)||(2767291-2767475)
chr8 (248-374)||(51132-51257)
chr8 (226-363)||(42972490-42972630)
chr8 (284-374)||(36967416-36967506)
chr8 (215-331)||(36006901-36007017)
chr8 (228-362)||(27294042-27294176)
chr8 (163-374)||(39300912-39301138)
chr8 (218-301)||(32678392-32678475)
chr8 (298-376)||(1739709-1739787)
chr8 (163-296)||(10953787-10953914)
chr8 (163-296)||(10961792-10961919)
chr8 (164-279)||(29226594-29226708)
chr8 (226-339)||(5356597-5356709)
chr8 (218-336)||(40028501-40028623)
chr8 (215-356)||(41091981-41092121)
chr8 (215-342)||(4924070-4924197)
chr8 (232-363)||(33765663-33765794)
chr8 (271-369)||(7703132-7703230)
chr8 (298-364)||(29226212-29226278)
chr8 (240-342)||(31331419-31331521)
chr8 (163-318)||(39466064-39466219)
chr8 (299-376)||(6611767-6611844)
chr8 (168-253)||(1875831-1875916)
chr8 (298-374)||(32678787-32678863)
chr8 (218-278)||(35732110-35732170)
chr8 (252-344)||(3117021-3117111)
chr8 (289-346)||(10953407-10953464)
chr8 (289-346)||(10961412-10961469)
chr8 (298-363)||(39329088-39329153)
chr8 (216-336)||(43719244-43719365)
chr8 (215-279)||(1739529-1739593)
chr8 (222-341)||(5878993-5879113)
chr8 (215-279)||(35504937-35505001)
chr8 (291-369)||(6796021-6796099)
chr8 (303-361)||(9549999-9550057)
chr8 (302-363)||(39329370-39329430)
chr8 (285-337)||(12559649-12559701)
chr8 (232-336)||(34057627-34057731)
chr8 (256-336)||(44648541-44648621)
chr8 (300-355)||(14819428-14819483)
chr8 (303-345)||(28072137-28072179)
chr8 (252-344)||(135668-135760)
chr8 (302-342)||(34455688-34455728)
chr8 (283-355)||(40109788-40109860)
chr8 (13-84)||(3184050-3184121)
chr8 (228-279)||(12559562-12559613)
chr8 (313-352)||(39465802-39465841)
chr8 (257-374)||(9839797-9839914)
chr8 (13-63)||(22277431-22277481)
chr8 (163-205)||(40996501-40996543)
chr8 (303-345)||(44225690-44225732)
chr8 (251-280)||(6796394-6796423)
chr8 (163-196)||(32476222-32476255)
chr8 (166-206)||(15675373-15675413)
chr8 (163-244)||(40109647-40109727)
[»] chr4 (104 HSPs)
chr4 (166-376)||(40122828-40123039)
chr4 (166-376)||(47464339-47464550)
chr4 (163-374)||(47772995-47773206)
chr4 (163-346)||(35380337-35380521)
chr4 (115-385)||(6643625-6643894)
chr4 (166-391)||(34360592-34360817)
chr4 (215-391)||(43237229-43237405)
chr4 (163-369)||(5841408-5841615)
chr4 (163-374)||(11907575-11907786)
chr4 (214-396)||(32884786-32884968)
chr4 (163-369)||(38405083-38405290)
chr4 (214-391)||(17237255-17237432)
chr4 (163-376)||(7061638-7061851)
chr4 (163-391)||(35311182-35311412)
chr4 (163-393)||(22129976-22130211)
chr4 (163-369)||(49428323-49428528)
chr4 (218-374)||(33790707-33790863)
chr4 (216-376)||(53346746-53346906)
chr4 (163-374)||(52859775-52859981)
chr4 (166-376)||(44536170-44536381)
chr4 (163-374)||(2066725-2066934)
chr4 (166-391)||(16821290-16821516)
chr4 (163-369)||(42616884-42617090)
chr4 (163-374)||(49175910-49176122)
chr4 (228-374)||(17114439-17114585)
chr4 (218-366)||(6609750-6609898)
chr4 (164-376)||(49746895-49747107)
chr4 (163-346)||(21240708-21240887)
chr4 (218-369)||(54506777-54506928)
chr4 (166-369)||(52247409-52247611)
chr4 (166-391)||(2942604-2942831)
chr4 (214-391)||(36985771-36985948)
chr4 (166-374)||(2653357-2653563)
chr4 (163-393)||(4972507-4972724)
chr4 (218-374)||(3689551-3689707)
chr4 (222-374)||(38502458-38502610)
chr4 (163-365)||(28500876-28501072)
chr4 (163-366)||(25233116-25233318)
chr4 (163-330)||(26147635-26147805)
chr4 (214-369)||(41711437-41711592)
chr4 (163-279)||(51624720-51624836)
chr4 (228-366)||(11288614-11288751)
chr4 (218-363)||(461947-462092)
chr4 (284-369)||(51625138-51625223)
chr4 (166-376)||(46396857-46397055)
chr4 (218-369)||(30682177-30682328)
chr4 (218-356)||(42517632-42517773)
chr4 (215-342)||(53412094-53412221)
chr4 (228-364)||(32469934-32470069)
chr4 (264-372)||(52869107-52869215)
chr4 (214-376)||(38663422-38663583)
chr4 (217-329)||(7986962-7987074)
chr4 (224-345)||(23915435-23915555)
chr4 (215-346)||(35998798-35998928)
chr4 (216-330)||(18741494-18741608)
chr4 (218-376)||(39397333-39397491)
chr4 (220-362)||(48914131-48914278)
chr4 (163-366)||(49579162-49579363)
chr4 (218-328)||(50264102-50264212)
chr4 (221-336)||(20612185-20612300)
chr4 (214-341)||(47358958-47359085)
chr4 (166-257)||(28911249-28911340)
chr4 (264-374)||(29575143-29575253)
chr4 (163-279)||(10754308-10754423)
chr4 (163-279)||(10968077-10968192)
chr4 (303-349)||(34321712-34321758)
chr4 (167-366)||(19265744-19265945)
chr4 (215-343)||(43902237-43902368)
chr4 (228-301)||(44526378-44526451)
chr4 (218-369)||(35251888-35252029)
chr4 (265-336)||(17512353-17512424)
chr4 (218-277)||(31370373-31370432)
chr4 (13-63)||(22866991-22867041)
chr4 (228-341)||(2400777-2400890)
chr4 (290-343)||(21325171-21325224)
chr4 (219-279)||(10672643-10672703)
chr4 (219-279)||(10886283-10886343)
chr4 (230-374)||(18532180-18532324)
chr4 (314-369)||(50263913-50263968)
chr4 (301-367)||(5618614-5618680)
chr4 (285-355)||(8175575-8175645)
chr4 (288-374)||(27880218-27880303)
chr4 (166-253)||(29295163-29295254)
chr4 (251-356)||(30192227-30192332)
chr4 (229-274)||(43967611-43967656)
chr4 (301-369)||(16411348-16411416)
chr4 (166-206)||(21698653-21698693)
chr4 (227-279)||(25142450-25142502)
chr4 (292-336)||(25869858-25869902)
chr4 (343-391)||(31919785-31919833)
chr4 (251-346)||(39157877-39157973)
chr4 (220-319)||(54202187-54202289)
chr4 (315-374)||(3669965-3670024)
chr4 (252-343)||(11024897-11024988)
chr4 (251-302)||(16506281-16506332)
chr4 (284-323)||(29295268-29295307)
chr4 (221-279)||(30260996-30261054)
chr4 (163-193)||(54921772-54921802)
chr4 (219-255)||(10699504-10699540)
chr4 (219-255)||(10913274-10913310)
chr4 (314-374)||(13016403-13016463)
chr4 (285-369)||(20598169-20598253)
chr4 (166-206)||(20681406-20681446)
chr4 (297-337)||(31257517-31257557)
[»] chr6 (63 HSPs)
chr6 (163-391)||(31894162-31894387)
chr6 (163-374)||(29363238-29363451)
chr6 (163-368)||(11655921-11656127)
chr6 (163-376)||(181491-181702)
chr6 (163-376)||(3720208-3720421)
chr6 (163-374)||(30716833-30717045)
chr6 (166-375)||(15058055-15058263)
chr6 (163-391)||(23142602-23142829)
chr6 (218-356)||(13909413-13909551)
chr6 (163-374)||(6801864-6802076)
chr6 (163-374)||(21010105-21010322)
chr6 (220-374)||(3291737-3291891)
chr6 (163-374)||(32440614-32440827)
chr6 (163-376)||(1781739-1781949)
chr6 (214-342)||(24983450-24983578)
chr6 (163-345)||(5302285-5302467)
chr6 (218-346)||(13087519-13087647)
chr6 (163-365)||(7920175-7920374)
chr6 (268-366)||(27448133-27448231)
chr6 (219-374)||(1063572-1063727)
chr6 (166-374)||(15582222-15582428)
chr6 (172-374)||(1955948-1956150)
chr6 (163-332)||(11143597-11143766)
chr6 (163-279)||(34657626-34657745)
chr6 (218-365)||(1225037-1225183)
chr6 (221-342)||(17828932-17829053)
chr6 (228-352)||(6834360-6834484)
chr6 (166-326)||(34299931-34300092)
chr6 (289-368)||(7072220-7072299)
chr6 (216-277)||(15046111-15046171)
chr6 (227-356)||(21804516-21804644)
chr6 (228-336)||(22398412-22398519)
chr6 (284-356)||(27367423-27367495)
chr6 (284-356)||(27457770-27457842)
chr6 (216-313)||(10923408-10923505)
chr6 (164-265)||(21425635-21425738)
chr6 (298-376)||(34639419-34639497)
chr6 (287-348)||(26592380-26592441)
chr6 (227-279)||(16205222-16205274)
chr6 (236-336)||(17835391-17835491)
chr6 (164-336)||(23397628-23397796)
chr6 (254-374)||(28101328-28101448)
chr6 (216-279)||(7071997-7072060)
chr6 (259-346)||(21018789-21018876)
chr6 (163-206)||(21478232-21478275)
chr6 (163-244)||(27367524-27367607)
chr6 (163-244)||(27457871-27457954)
chr6 (218-325)||(33510129-33510234)
chr6 (218-279)||(4367317-4367378)
chr6 (252-321)||(12605485-12605554)
chr6 (285-325)||(4581999-4582039)
chr6 (163-206)||(27367236-27367279)
chr6 (163-206)||(27457583-27457626)
chr6 (13-80)||(30539125-30539192)
chr6 (284-346)||(2423673-2423735)
chr6 (301-367)||(7764215-7764281)
chr6 (214-308)||(8695030-8695124)
chr6 (13-79)||(12134630-12134696)
chr6 (221-279)||(13206896-13206954)
chr6 (222-295)||(21425397-21425470)
chr6 (164-259)||(28106013-28106105)
chr6 (252-313)||(8115068-8115129)
chr6 (13-77)||(22911321-22911385)
[»] scaffold0159 (1 HSPs)
scaffold0159 (163-391)||(33972-34199)
[»] scaffold0095 (3 HSPs)
scaffold0095 (164-376)||(50139-50351)
scaffold0095 (163-318)||(22282-22437)
scaffold0095 (313-352)||(22660-22699)
[»] scaffold0018 (1 HSPs)
scaffold0018 (216-391)||(135990-136165)
[»] scaffold0302 (1 HSPs)
scaffold0302 (227-386)||(16096-16255)
[»] scaffold0110 (2 HSPs)
scaffold0110 (218-374)||(1693-1849)
scaffold0110 (166-206)||(1493-1533)
[»] scaffold0294 (1 HSPs)
scaffold0294 (214-377)||(17020-17183)
[»] scaffold0328 (1 HSPs)
scaffold0328 (163-374)||(7951-8163)
[»] scaffold0012 (2 HSPs)
scaffold0012 (218-365)||(105673-105820)
scaffold0012 (301-337)||(105184-105220)
[»] scaffold1809 (1 HSPs)
scaffold1809 (163-331)||(697-864)
[»] scaffold0583 (1 HSPs)
scaffold0583 (218-368)||(2014-2164)
[»] scaffold0330 (1 HSPs)
scaffold0330 (228-366)||(5389-5527)
[»] scaffold0182 (1 HSPs)
scaffold0182 (218-355)||(20342-20479)
[»] scaffold0003 (3 HSPs)
scaffold0003 (268-366)||(39127-39225)
scaffold0003 (163-301)||(252848-252984)
scaffold0003 (298-369)||(252504-252575)
[»] scaffold0011 (1 HSPs)
scaffold0011 (215-336)||(14178-14297)
[»] scaffold0016 (1 HSPs)
scaffold0016 (166-265)||(76229-76328)
[»] scaffold0470 (1 HSPs)
scaffold0470 (299-376)||(1055-1132)
[»] scaffold0464 (1 HSPs)
scaffold0464 (288-369)||(6260-6341)
[»] scaffold1391 (1 HSPs)
scaffold1391 (264-352)||(1809-1897)
[»] scaffold0188 (1 HSPs)
scaffold0188 (232-364)||(6741-6872)
[»] scaffold0021 (1 HSPs)
scaffold0021 (252-350)||(126194-126292)
[»] scaffold2146 (1 HSPs)
scaffold2146 (221-318)||(397-494)
[»] scaffold0279 (1 HSPs)
scaffold0279 (284-345)||(12053-12114)
[»] scaffold0001 (1 HSPs)
scaffold0001 (299-343)||(143900-143944)
[»] scaffold0024 (1 HSPs)
scaffold0024 (333-376)||(84381-84424)
[»] scaffold0068 (1 HSPs)
scaffold0068 (232-276)||(56664-56708)


Alignment Details
Target: chr3 (Bit Score: 138; Significance: 5e-72; HSPs: 81)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 138; E-Value: 5e-72
Query Start/End: Original strand, 163 - 392
Target Start/End: Complemental strand, 43254045 - 43253815
Alignment:
Q  163 ctcaaaataattgtcactttacaataccaatgcaatatttattannnnnnn-ccactattatactcttatttattgaatttcatcaaacttaactactcc 261  Q
    ||||||||||||||||||||||||||||||||||| ||||||||        |||||||||||| |||||||| |||||||||||  |||||||||||||    
T  43254045 ctcaaaataattgtcactttacaataccaatgcaacatttattagtttttttccactattatacccttatttaatgaatttcatcccacttaactactcc 43253946  T
Q  262 actaactacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaacacaattaatcatttccttaataattgtgcacaaatctta 361  Q
    |||||||||||||||||| || ||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||| ||||    
T  43253945 actaactacaattaataagggtgttttagtaaatgctactaattttaccattgaaatcaacacaattaatcatttccttaataatcgtgcacaaacctta 43253846  T
Q  362 aacgactaatattgtttgacggaggtagtag 392  Q
    |||||  ||||||||  |||||||| |||||    
T  43253845 aacgatcaatattgtgagacggagggagtag 43253815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 166 - 376
Target Start/End: Original strand, 37311886 - 37312097
Alignment:
Q  166 aaaataattgtcactttacaataccaatgcaatatttattannnnnnncc-actattatactcttatttattgaatttcatcaaacttaactactccact 264  Q
    ||||||||||||||||||||||| |||||||  ||||||||        | | |||||||||||||||||||||||||||| ||| ||||||||||||||    
T  37311886 aaaataattgtcactttacaatatcaatgcagcatttattattatttttctattattatactcttatttattgaatttcattaaatttaactactccact 37311985  T
Q  265 aactacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaacacaattaatcatttccttaataattgtgcacaaatcttaaac 364  Q
    ||||||||||||||| ||  |||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||| ||||| ||| |||||||    
T  37311986 aactacaattaataagggttttttagtaaatgctactaattttaccattgaaatcaacacaattaatcatttccttaataatcgtgcataaaccttaaac 37312085  T
Q  365 gactaatattgt 376  Q
    ||||||||||||    
T  37312086 gactaatattgt 37312097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 174 - 374
Target Start/End: Complemental strand, 37695837 - 37695635
Alignment:
Q  174 tgtcactttacaataccaatgcaatatttattannnnnnn-ccactattatactcttatttattgaatttcatcaaacttaactactccactaactacaa 272  Q
    |||||||||| ||||||||||||| ||||||||        ||| |||||||| |||||||||||||||||||| |||||||||||||||||||||||||    
T  37695837 tgtcactttagaataccaatgcaacatttattattttttttccattattatacccttatttattgaatttcatctaacttaactactccactaactacaa 37695738  T
Q  273 ttaataatggagttttagtaaatgttactaattttaccattaaaatcaacacaattaatcatttccttaataattgtgcac-aaatcttaaacgactaat 371  Q
    ||||||| || ||||||||||||| || ||||||||||||| |||||||||||||||||||||||||||||||| |||||| ||| |||||||||||| |    
T  37695737 ttaataagggtgttttagtaaatgatattaattttaccattgaaatcaacacaattaatcatttccttaataatcgtgcacaaaaccttaaacgactatt 37695638  T
Q  372 att 374  Q
    |||    
T  37695637 att 37695635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 163 - 376
Target Start/End: Complemental strand, 36460597 - 36460384
Alignment:
Q  163 ctcaaaataattgtcactttacaataccaatgcaatatttattannnnnnnccactattatactcttatttattgaatttcatcaaacttaactactcca 262  Q
    |||||||||||||||||||||| ||| |||||||||||||||||       |||||||||||| |||||||||||||||||||| ||||||| |||||||    
T  36460597 ctcaaaataattgtcactttacgatatcaatgcaatatttattatttgtttccactattatacccttatttattgaatttcatccaacttaattactcca 36460498  T
Q  263 ctaactacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaacacaattaatcatttccttaataattgtgcacaaatcttaa 362  Q
     ||||||||||||||||     ||||| ||||||||||||||||||| ||| |||| |||||||||||| |||| ||||||||| |||||||||  ||||    
T  36460497 ttaactacaattaataagaatattttaataaatgttactaattttactattgaaattaacacaattaataattttcttaataatcgtgcacaaactttaa 36460398  T
Q  363 acgactaatattgt 376  Q
    ||||||||||||||    
T  36460397 acgactaatattgt 36460384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 163 - 368
Target Start/End: Complemental strand, 10366830 - 10366618
Alignment:
Q  163 ctcaaaataattgtcactttacaataccaatgcaatatttattannnnnnnccactattatactcttatttattgaatttcatcaaacttaactactcca 262  Q
    ||||||||||||||||||||| ||||||||||||| ||||||||       ||| |||||||| |||||||||||||||||||| |||||||||||| ||    
T  10366830 ctcaaaataattgtcactttagaataccaatgcaacatttattattttttcccattattatacccttatttattgaatttcatccaacttaactacttca 10366731  T
Q  263 ctaactacaattaataat-------ggagttttagtaaatgttactaattttaccattaaaatcaacacaattaatcatttccttaataattgtgcacaa 355  Q
    ||||||||||||||||||        | |||||| |||||| |||||||||||||||| |||||||||||||||||||||| ||||||||| ||||||||    
T  10366730 ctaactacaattaataattaataagagtgttttaataaatgatactaattttaccattgaaatcaacacaattaatcattttcttaataatcgtgcacaa 10366631  T
Q  356 atcttaaacgact 368  Q
    | |||||||||||    
T  10366630 accttaaacgact 10366618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 163 - 369
Target Start/End: Complemental strand, 30190841 - 30190635
Alignment:
Q  163 ctcaaaataattgtcactttacaataccaatgcaatatttattannnnnnnccactattatactcttatttattgaatttcatcaaacttaactactcca 262  Q
    ||||||||||||||||||||| ||||  |||| || ||||||||       ||| |||| ||| |||||| ||||||||||||| |||||||||||||||    
T  30190841 ctcaaaataattgtcactttagaataaaaatgtaacatttattattaatttccattattttacccttattaattgaatttcatccaacttaactactcca 30190742  T
Q  263 ctaactacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaacacaattaatcatttccttaataattgtgcacaaatcttaa 362  Q
    ||||||||||||||||| ||  |||||||||||| |||||||||||||||| |||||||||||||||||||||||||| ||||  ||||||||| |||||    
T  30190741 ctaactacaattaataagggtattttagtaaatgatactaattttaccattgaaatcaacacaattaatcatttccttcataaccgtgcacaaaccttaa 30190642  T
Q  363 acgacta 369  Q
    |||||||    
T  30190641 acgacta 30190635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 163 - 366
Target Start/End: Original strand, 37497425 - 37497629
Alignment:
Q  163 ctcaaaataattgtcactttacaataccaatgcaatatttattannnnnnnc-cactattatactcttatttattgaatttcatcaaacttaactactcc 261  Q
    ||||||||||||||||||||| ||||||||| ||| ||||||||         || ||||||||  ||||||||||||||||||| ||||||||||||||    
T  37497425 ctcaaaataattgtcactttataataccaatacaacatttattattattttttcattattatacgtttatttattgaatttcatccaacttaactactcc 37497524  T
Q  262 actaactacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaacacaattaatcatttccttaataattgtgcacaaatctta 361  Q
    |||||||||| |||| || || ||||||||||||| ||||||||||||||| |||||||||||||| |||||||||||||||||| ||||| ||||||||    
T  37497525 actaactacagttaacaacggtgttttagtaaatgatactaattttaccatcaaaatcaacacaataaatcatttccttaataatcgtgcataaatctta 37497624  T
Q  362 aacga 366  Q
    |||||    
T  37497625 aacga 37497629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 163 - 369
Target Start/End: Original strand, 19822945 - 19823151
Alignment:
Q  163 ctcaaaataattgtcacttt-acaataccaatgcaatatttattannnnnnnccactattatactcttatttattgaatttcatcaaacttaactactcc 261  Q
    |||||||||||||||||||| | ||||||||||||  ||||||||       | | || ||||| |||||||||||||||||||| |||||||||| |||    
T  19822945 ctcaaaataattgtcacttttagaataccaatgcagcatttattatttttttc-attaatatacccttatttattgaatttcatccaacttaactattcc 19823043  T
Q  262 actaactacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaacacaattaatcatttccttaataattgtgcacaaatctta 361  Q
    |||||||||||||||||| || ||||||||||||| |||||||| |||||| ||||||||||||||||||||||||||||||||| ||||||||| ||||    
T  19823044 actaactacaattaataagggtgttttagtaaatgatactaattctaccatcaaaatcaacacaattaatcatttccttaataatcgtgcacaaacctta 19823143  T
Q  362 aacgacta 369  Q
    ||| ||||    
T  19823144 aacaacta 19823151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 218 - 391
Target Start/End: Original strand, 1778632 - 1778804
Alignment:
Q  218 tattatactcttatttattgaatttcatcaaacttaactactccactaactacaattaataatggagttttagtaaatgttactaattttaccattaaaa 317  Q
    |||||||| |||||||||||||||||||| |||||| ||||||||||||||||||| ||||| |  |||||||||||||| | |||||||| |||| |||    
T  1778632 tattatacccttatttattgaatttcatccaacttatctactccactaactacaat-aataaggatgttttagtaaatgtcattaattttatcattgaaa 1778730  T
Q  318 tcaacacaattaatcatttccttaataattgtgcacaaatcttaaacgactaatattgtttgacggaggtagta 391  Q
    |||||||||||||||||||||||||||||  |||||||| |||||||||||||||||||  |||||||| ||||    
T  1778731 tcaacacaattaatcatttccttaataatcatgcacaaaccttaaacgactaatattgtgagacggagggagta 1778804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 214 - 369
Target Start/End: Complemental strand, 8679184 - 8679029
Alignment:
Q  214 ccactattatactcttatttattgaatttcatcaaacttaactactccactaactacaattaataatggagttttagtaaatgttactaattttaccatt 313  Q
    |||||||||||| |||||||||||||||||||| ||||||| || | ||||||||| ||||||||| |   |||||||||||| ||||||||||||||||    
T  8679184 ccactattatacccttatttattgaatttcatccaacttaattaattcactaactataattaataaggatcttttagtaaatgctactaattttaccatt 8679085  T
Q  314 aaaatcaacacaattaatcatttccttaataattgtgcacaaatcttaaacgacta 369  Q
     |||||||||||||||||||||||||||||||| ||||| ||||||||||||||||    
T  8679084 gaaatcaacacaattaatcatttccttaataatcgtgcataaatcttaaacgacta 8679029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 215 - 374
Target Start/End: Original strand, 11632067 - 11632225
Alignment:
Q  215 cactattatactcttatttattgaatttcatcaaacttaactactccactaactacaattaataatggagttttagtaaatgttactaattttaccatta 314  Q
    |||||||||||| ||||||||||||||||||| |||||||||  ||||||||||||||||||||| || ||||||||||||  ||||||||||||| ||     
T  11632067 cactattatacttttatttattgaatttcatccaacttaacttttccactaactacaattaataaaggtgttttagtaaatactactaattttaccgttg 11632166  T
Q  315 aaatcaacacaattaatcatttccttaataattgtgcacaaatcttaaacgactaatatt 374  Q
    ||||||||||||||||||||||  |||||||| |||||||||||||||| ||||||||||    
T  11632167 aaatcaacacaattaatcattt-tttaataatcgtgcacaaatcttaaatgactaatatt 11632225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 163 - 364
Target Start/End: Original strand, 36476518 - 36476719
Alignment:
Q  163 ctcaaaataattgtcactttacaataccaatgcaatatttattannnnnnnccactattatactcttatttattgaatttcatcaaacttaactactcca 262  Q
    ||||||||||||||||||||| ||||||||||||  ||||||||       | | |||||||| |||||||||||||||||||||||||||||||||| |    
T  36476518 ctcaaaataattgtcactttagaataccaatgcagcatttattacttttttctattattatacccttatttattgaatttcatcaaacttaactactcta 36476617  T
Q  263 ctaactacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaacacaattaatcatttccttaataattgtgcacaaatcttaa 362  Q
    ||||||||||||||||| ||  |||||||||||| || |||||||||||||  |||||||||||| ||| |||| ||||||||  ||| ||||| |||||    
T  36476618 ctaactacaattaataagggtattttagtaaatgatattaattttaccattgcaatcaacacaatcaattattttcttaataaccgtgaacaaaccttaa 36476717  T
Q  363 ac 364  Q
    ||    
T  36476718 ac 36476719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 163 - 367
Target Start/End: Original strand, 44301495 - 44301700
Alignment:
Q  163 ctcaaaataattgtcactttacaataccaatgcaatatttattannnnnnn-ccactattatactcttatttattgaatttcatcaaacttaactactcc 261  Q
    ||||||||||||||||||||| |||| |||||||| ||||||||        ||||||||||||||||||||||||||||||||| ||||||||||||||    
T  44301495 ctcaaaataattgtcactttataatatcaatgcaacatttattaatatttttccactattatactcttatttattgaatttcatccaacttaactactcc 44301594  T
Q  262 actaactacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaacacaattaatcatttccttaataattgtgcacaaatctta 361  Q
    ||||| ||||||| |||| ||  |||||||||||| ||||||||||| |||| ||||||||| ||||||  |||||||||| | | | ||||||| ||||    
T  44301595 actaattacaattgataagggtattttagtaaatgatactaattttatcattgaaatcaacataattaaatatttccttaaaagtcgggcacaaacctta 44301694  T
Q  362 aacgac 367  Q
    ||||||    
T  44301695 aacgac 44301700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 163 - 386
Target Start/End: Original strand, 27471269 - 27471492
Alignment:
Q  163 ctcaaaataattgtcactttacaataccaatgcaatatttattannnnnnnccactattatactcttatttattgaatttcatcaaacttaactactcca 262  Q
    ||||||||||||||||||||| ||||||||| ||  ||||||||       ||||||  ||||  ||||||||||||||||||  |||||||||||||||    
T  27471269 ctcaaaataattgtcactttataataccaatacagcatttattatttttgtccactaccatacctttatttattgaatttcattcaacttaactactcca 27471368  T
Q  263 ctaactacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaacacaattaatcatttccttaataattgtgcacaaatcttaa 362  Q
    |||  || |||||||||  | |||||||||||||  |||||||| |||||| ||||||||| |||||||||||| ||||||||| |||||||||||||||    
T  27471369 ctacttataattaataagagtgttttagtaaatgcaactaatttcaccattgaaatcaacataattaatcattttcttaataatcgtgcacaaatcttaa 27471468  T
Q  363 acgactaatattgtttgacggagg 386  Q
    |||| |||| ||||  ||||||||    
T  27471469 acgattaatgttgtgagacggagg 27471492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 227 - 376
Target Start/End: Complemental strand, 23004499 - 23004351
Alignment:
Q  227 cttatttattgaatttcatcaaacttaactactccactaactacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaacacaa 326  Q
    |||||||||||||||||||  |||||||||||||||||||||||||||||||| || ||||||||| ||  |||||||||||||||| ||||| ||||||    
T  23004499 cttatttattgaatttcatacaacttaactactccactaactacaattaataagggtgttttagtatatactactaattttaccattgaaatcgacacaa 23004400  T
Q  327 ttaatcatttccttaataattgtgcacaaatcttaaacgactaatattgt 376  Q
    |||||||||||||||||||| ||  ||||| |||||||||||||||||||    
T  23004399 ttaatcatttccttaataatagt-aacaaaccttaaacgactaatattgt 23004351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 218 - 369
Target Start/End: Complemental strand, 29024091 - 29023941
Alignment:
Q  218 tattatactcttatttattgaatttcatcaaacttaactactccactaactacaattaataatggagttttagtaaatgttactaattttaccattaaaa 317  Q
    ||||||||  ||||||||||||||||||| ||||||| |||||||||||||||||||||||| |  ||||||||||||| ||||||||||||||| ||||    
T  29024091 tattataccattatttattgaatttcatccaacttaattactccactaactacaattaataa-gatgttttagtaaatgatactaattttaccatcaaaa 29023993  T
Q  318 tcaacacaattaatcatttccttaataattgtgcacaaatcttaaacgacta 369  Q
    |||||||||||||||||||  |||||||| ||||| ||| ||||||||||||    
T  29023992 tcaacacaattaatcatttttttaataatcgtgcataaaccttaaacgacta 29023941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 163 - 374
Target Start/End: Original strand, 38795278 - 38795489
Alignment:
Q  163 ctcaaaataattgtcactttacaataccaatgcaatatttattannnnnnnccactattatactcttatttattgaatttcatcaaacttaactactcca 262  Q
    ||||||||||||||||||||| ||||||||||||||||||  |        |||||||||| | ||| |||||| ||||||||| |||||||| ||||||    
T  38795278 ctcaaaataattgtcactttagaataccaatgcaatattttattttattttccactattatgcccttttttattaaatttcatccaacttaacaactcca 38795377  T
Q  263 ctaactacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaacacaattaatcatttccttaataattgtgcacaaatcttaa 362  Q
    | ||||||||||||||| ||  |||  ||||||| |||||||||||||||| |||| |||||||||||||||||||||||  || |||||||||  ||||    
T  38795378 ccaactacaattaataagggcatttgggtaaatgatactaattttaccattgaaataaacacaattaatcatttccttaaatatcgtgcacaaacattaa 38795477  T
Q  363 acgactaatatt 374  Q
    ||||||| ||||    
T  38795478 acgactattatt 38795489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 215 - 376
Target Start/End: Original strand, 30711059 - 30711220
Alignment:
Q  215 cactattatactcttatttattgaatttcatcaaacttaactactccactaactacaattaataatggagttttagtaaatgttactaattttaccatta 314  Q
    |||||||||| ||||||||||||||||||||| ||||||| | ||||| ||||||||||||||||||| ||||||||||||| || |||||||| |||||    
T  30711059 cactattataatcttatttattgaatttcatctaacttaattgctccattaactacaattaataatggtgttttagtaaatgatattaattttatcatta 30711158  T
Q  315 aaatcaacacaattaatcatttccttaataattgtgcacaaatcttaaacgactaatattgt 376  Q
    ||||||||| ||||||| ||||| |||||||   |||||||| ||||||  |||||||||||    
T  30711159 aaatcaacataattaattatttctttaataacaatgcacaaaccttaaaatactaatattgt 30711220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 163 - 365
Target Start/End: Complemental strand, 37773147 - 37772943
Alignment:
Q  163 ctcaaaataattgtcactttacaataccaatgcaatatttatt--annnnnnnccactattatactcttatttattgaatttcatcaaacttaactactc 260  Q
    ||||||||||||||||||||||||||||||||||  |||||||  |       ||| |||||||| |||||||| ||||||||||  |||||||||| ||    
T  37773147 ctcaaaataattgtcactttacaataccaatgcagcatttattttatttttttccattattatacccttatttaatgaatttcattcaacttaactattc 37773048  T
Q  261 cactaactacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaacacaattaatcatttccttaataattgtgcacaaatctt 360  Q
    |||| |||| ||||||||| ||  |||||||||||| || |||||||||||||  |||||| ||||||||||||||||||||||||  |||||||| |||    
T  37773047 cactgactataattaataagggtattttagtaaatgatattaattttaccattgtaatcaatacaattaatcatttccttaataatcatgcacaaacctt 37772948  T
Q  361 aaacg 365  Q
    |||||    
T  37772947 aaacg 37772943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 215 - 385
Target Start/End: Complemental strand, 12736701 - 12736531
Alignment:
Q  215 cactattatactcttatttattgaatttcatcaaacttaactactccactaactacaattaataatggagttttagtaaatgttactaattttaccatta 314  Q
    ||||||||||| |||||||||||||||| ||| || ||||||||| |||||| |||||||||||| ||  || ||||||||| ||||||||||| |||||    
T  12736701 cactattatacccttatttattgaattttatccaaattaactactacactaagtacaattaataagggtattgtagtaaatgatactaattttatcatta 12736602  T
Q  315 aaatcaacacaattaatcatttccttaataattgtgcacaaatcttaaacgactaatattgtttgacggag 385  Q
     ||||||||||||||||||||||||||| ||| |||||||||  |||||| |||| |||| | ||||||||    
T  12736601 gaatcaacacaattaatcatttccttaaaaatcgtgcacaaactttaaacaactattattttatgacggag 12736531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 218 - 376
Target Start/End: Original strand, 3313243 - 3313397
Alignment:
Q  218 tattatactcttatttattgaatttcatcaaacttaactactccactaactacaattaataatggagttttagtaaatgttactaattttaccattaaaa 317  Q
    ||||||| ||||||||||||||||||||| ||||||| ||||||| |||||||||||||||| || |||||||| |||  |||||||||||||||| |||    
T  3313243 tattataatcttatttattgaatttcatccaacttaaatactccattaactacaattaataagggtgttttagttaattctactaattttaccattgaaa 3313342  T
Q  318 tcaacacaattaatcatttccttaataattgtgcacaaatcttaaacgactaatattgt 376  Q
    || |||    ||||||||| ||||||||| ||||||||| |||||||||||||||||||    
T  3313343 tcgaca----taatcattttcttaataatcgtgcacaaaccttaaacgactaatattgt 3313397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 230 - 369
Target Start/End: Complemental strand, 24569214 - 24569075
Alignment:
Q  230 atttattgaatttcatcaaacttaactactccactaactacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaacacaatta 329  Q
    ||||| ||||||||||  |||||||||||||||||||||||||||||||| ||  |||||||||||  || ||||||||||||| |||||||||||||||    
T  24569214 atttaatgaatttcattcaacttaactactccactaactacaattaataagggtattttagtaaataatattaattttaccattgaaatcaacacaatta 24569115  T
Q  330 atcatttccttaataattgtgcacaaatcttaaacgacta 369  Q
    ||||||| ||||||||| ||||| ||||||||| ||||||    
T  24569114 atcattttcttaataatcgtgcataaatcttaagcgacta 24569075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 163 - 369
Target Start/End: Complemental strand, 51838141 - 51837934
Alignment:
Q  163 ctcaaaataattgtcactttacaataccaatgcaatatttattannnnnnn-ccactattatactcttatttattgaatttcatcaaacttaactactcc 261  Q
    |||||||||||||||||||||||||   ||||||| ||||||||        |||||||||||| |||||||| ||||||||||  ||| ||||||||||    
T  51838141 ctcaaaataattgtcactttacaattataatgcaacatttattattttttttccactattatacccttatttaatgaatttcattcaacgtaactactcc 51838042  T
Q  262 actaactacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaacacaattaatcatttccttaataattgtgcacaaatctta 361  Q
    |||| |||||| |||||| ||  |||||||||||| || |||||||| |||| |||||||||||||||||||||| ||||||| |  |||||||| ||||    
T  51838041 actagctacaactaataagggtattttagtaaatgatattaattttatcattgaaatcaacacaattaatcatttacttaatactcatgcacaaacctta 51837942  T
Q  362 aacgacta 369  Q
    || |||||    
T  51837941 aatgacta 51837934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 163 - 374
Target Start/End: Original strand, 17652687 - 17652893
Alignment:
Q  163 ctcaaaataattgtcactttacaataccaatgcaatatttattannnnnnnccactattatactcttatttattgaatttcatcaaacttaactactcca 262  Q
    ||||||||||||||||||||| ||||  |||||| ||||||| |       | | |||||||| |||||||||| ||||||||| |||||||||||  ||    
T  17652687 ctcaaaataattgtcactttagaatattaatgcagtatttat-aattttttcaattattatacccttatttattaaatttcatccaacttaactacctca 17652785  T
Q  263 ctaactacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaacacaattaatcatttccttaataattgtgcacaaatcttaa 362  Q
    ||||||||||||||||| |  ||||||||||    ||||| ||||||||| ||||||||||||||||||||||||||||||||| ||||| ||| || ||    
T  17652786 ctaactacaattaataaggatgttttagtaa----tactagttttaccatcaaaatcaacacaattaatcatttccttaataatcgtgcataaacctcaa 17652881  T
Q  363 acgactaatatt 374  Q
    ||||||| ||||    
T  17652882 acgactattatt 17652893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 163 - 345
Target Start/End: Original strand, 54726419 - 54726601
Alignment:
Q  163 ctcaaaataattgtcactttacaataccaatgcaatatttattannnnnnnccactattatactcttatttattgaatttcatcaaacttaactactcca 262  Q
    |||||||||||||  |||||| ||||| ||||||| ||||||||       ||| ||| |||| |||||||||| || |||||| |||||||||||||||    
T  54726419 ctcaaaataattgcaactttagaatactaatgcaacatttattagtttttcccattataatacccttatttattaaacttcatctaacttaactactcca 54726518  T
Q  263 ctaactacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaacacaattaatcatttccttaataa 345  Q
     |||||||||||||||| |  ||||||||||||| || |||||||||||| |||||||||||| |||||||||| ||||||||    
T  54726519 ttaactacaattaataaagatgttttagtaaatgatattaattttaccatcaaaatcaacacatttaatcattttcttaataa 54726601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 216 - 363
Target Start/End: Original strand, 34750483 - 34750630
Alignment:
Q  216 actattatactcttatttattgaatttcatcaaacttaactactccactaactacaattaataatggagttttagtaaatgttactaattttaccattaa 315  Q
    ||||||||||  ||||||||| | ||||||| || ||||||||||||| ||||||||||||||| |  ||||||||||||| ||||||||||||||||||    
T  34750483 actattataccattatttattaattttcatccaagttaactactccaccaactacaattaataaggatgttttagtaaatgatactaattttaccattaa 34750582  T
Q  316 aatcaacacaattaatcatttccttaataattgtgcacaaatcttaaa 363  Q
    |||||||||||| ||||||||| | || ||| ||||||||| ||||||    
T  34750583 aatcaacacaatcaatcatttcatcaaaaatcgtgcacaaaccttaaa 34750630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 227 - 374
Target Start/End: Original strand, 45710848 - 45710995
Alignment:
Q  227 cttatttattgaatttcatcaaacttaactactccactaactacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaacacaa 326  Q
    ||||||||||||| |||||| ||||||||||||||||||||||||||||||||  | ||||||||||||| || |||||||||||| |||||||||| ||    
T  45710848 cttatttattgaacttcatccaacttaactactccactaactacaattaataaaagtgttttagtaaatgatattaattttaccatcaaaatcaacataa 45710947  T
Q  327 ttaatcatttccttaataattgtgcacaaatcttaaacgactaatatt 374  Q
    |||||||||| ||||| ||  |||||  || |||||||||||| ||||    
T  45710948 ttaatcattttcttaacaaccgtgcatcaaccttaaacgactattatt 45710995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 228 - 366
Target Start/End: Original strand, 11905821 - 11905959
Alignment:
Q  228 ttatttattgaatttcatcaaacttaactactccactaactacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaacacaat 327  Q
    ||||||||||||||||||| |||||||| |||||| |||||||||||||||| || | ||||||||||| ||||||||||| ||| ||||| ||||||||    
T  11905821 ttatttattgaatttcatccaacttaacaactccattaactacaattaataagggtgctttagtaaatgatactaattttatcatcaaaattaacacaat 11905920  T
Q  328 taatcatttccttaataattgtgcacaaatcttaaacga 366  Q
    ||||||||| ||||||||| ||||| |||  ||||||||    
T  11905921 taatcattttcttaataatcgtgcataaactttaaacga 11905959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 164 - 374
Target Start/End: Complemental strand, 38137626 - 38137413
Alignment:
Q  164 tcaaaataattgtcactttacaataccaatgcaatatttattannnnnnnccactattatactcttatttattgaatttcatcaaacttaactactccac 263  Q
    ||||||||||||||||||| |||||| ||||||||||||||||       |||||||||||   ||||||||||||||||||| || |||||||| ||||    
T  38137626 tcaaaataattgtcactttgcaatactaatgcaatatttattattattttccactattatatctttatttattgaatttcatcgaatttaactaccccac 38137527  T
Q  264 taactacaattaataatggagttttagtaaatgt---tactaattttaccattaaaatcaacacaattaatcatttccttaataattgtgcacaaatctt 360  Q
    |||||||| |||||||     |||||||| ||||   |||||||||||| ||| ||||| ||||||| ||| ||||| || |||||  |||||||| |||    
T  38137526 taactacagttaataagaatattttagtagatgtcagtactaattttactattgaaatcgacacaatgaattatttcatttataatcatgcacaaacctt 38137427  T
Q  361 aaacgactaatatt 374  Q
    ||||||||||||||    
T  38137426 aaacgactaatatt 38137413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 219 - 364
Target Start/End: Complemental strand, 28690907 - 28690762
Alignment:
Q  219 attatactcttatttattgaatttcatcaaacttaactactccactaactacaattaataatggagttttagtaaatgttactaattttaccattaaaat 318  Q
    |||||||  ||||||||||||||||||| ||||||||||   ||||||||||||||||||| |   |||||||||||| || |||||||||| || ||||    
T  28690907 attatacatttatttattgaatttcatccaacttaactatctcactaactacaattaataaagatattttagtaaatgatattaattttaccgttgaaat 28690808  T
Q  319 caacacaattaatcatttccttaataattgtgcacaaatcttaaac 364  Q
    ||||||||||||||||||| |||||||| ||||||||| |||||||    
T  28690807 caacacaattaatcatttctttaataatcgtgcacaaaccttaaac 28690762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 167 - 326
Target Start/End: Complemental strand, 39043932 - 39043772
Alignment:
Q  167 aaataattgtcactttacaataccaatgcaatatttattannnnnnnccactattatactcttatttattgaatttcatcaaacttaactactccactaa 266  Q
    ||||||||||||||||| ||||||||||||| ||||||||        || |||||||| |||||||||||||||||||  |||||||||||||||||||    
T  39043932 aaataattgtcactttagaataccaatgcaacatttattatttttt--cattattatacccttatttattgaatttcattcaacttaactactccactaa 39043835  T
Q  267 ctacaattaataatggagttttagtaaatgttac---taattttaccattaaaatcaacacaa 326  Q
    ||||||||||||| ||  |||||||||||| |||   ||||||||||||| ||||||||||||    
T  39043834 ctacaattaataaaggtattttagtaaatgatactattaattttaccattgaaatcaacacaa 39043772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 163 - 374
Target Start/End: Original strand, 53560150 - 53560362
Alignment:
Q  163 ctcaaaataattgtcactttacaataccaatgcaatatttatt-annnnnnnccactattatactcttatttattgaatttcatcaaacttaactactcc 261  Q
    ||||||||||||||||||||| ||||| ||||||  ||||||| |       ||| ||| | || ||||||||||||| |||||  |||||||||||||     
T  53560150 ctcaaaataattgtcactttagaatactaatgcagcatttatttatttttttccattataacacccttatttattgaacttcattcaacttaactactct 53560249  T
Q  262 actaactacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaacacaattaatcatttccttaataattgtgcacaaatctta 361  Q
    |||||||| | ||||||| || ||||||||||||| ||| ||||||||||| |||||||||| ||||||||||||||||||| || |||||  || ||||    
T  53560250 actaactatatttaataagggtgttttagtaaatgatacaaattttaccatcaaaatcaacataattaatcatttccttaatcatcgtgcatcaacctta 53560349  T
Q  362 aacgactaatatt 374  Q
    ||| |||| ||||    
T  53560350 aacaactattatt 53560362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 163 - 374
Target Start/End: Original strand, 34957438 - 34957648
Alignment:
Q  163 ctcaaaataattgtcactttacaataccaatgcaatatttattannnnnnnccactattatactcttatttattgaatttcatcaaacttaactactcca 262  Q
    |||||||||||| |||||||| |||||||||| || ||||||||       ||  || ||||  |||||||||||||||||||  |||| ||||||||||    
T  34957438 ctcaaaataattatcactttaaaataccaatgtaacatttattatttttt-ccgttactatatccttatttattgaatttcatttaactgaactactcca 34957536  T
Q  263 ctaactacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaacacaattaatcatttccttaataattgtgcacaaatcttaa 362  Q
    ||||||| ||||||||| |   ||| |||||||  ||| ||||||||||| ||| |||||||||||||||||||||||| ||||||| || ||| |||||    
T  34957537 ctaactataattaataaggatatttaagtaaattatacaaattttaccatcaaattcaacacaattaatcatttccttagtaattgtccataaaccttaa 34957636  T
Q  363 acgactaatatt 374  Q
    ||||||| ||||    
T  34957637 acgactattatt 34957648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 218 - 368
Target Start/End: Original strand, 14194545 - 14194694
Alignment:
Q  218 tattatactcttatttattgaatttcatcaaacttaactactccactaactacaattaataatggagttttagtaaatgttactaattttaccattaaaa 317  Q
    ||||||||  ||||| ||||||||||||| ||||||| |||||||||||| |||||| ||||  |  |||||||||||| ||||||||||| |||| |||    
T  14194545 tattatacctttattaattgaatttcatccaacttaattactccactaac-acaattcataaaagtattttagtaaatggtactaattttatcattgaaa 14194643  T
Q  318 tcaacacaattaatcatttccttaataattgtgcacaaatcttaaacgact 368  Q
    ||||||||||| |||||||| |||| ||| ||||||||| |||||||||||    
T  14194644 tcaacacaattgatcatttctttaaaaatcgtgcacaaaccttaaacgact 14194694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 218 - 369
Target Start/End: Complemental strand, 5323063 - 5322914
Alignment:
Q  218 tattatactcttatttattgaatttcatcaaacttaactactccactaactacaattaataatggagttttagtaaatgttactaattttaccattaaaa 317  Q
    |||||||| |||||||||||||||||||||||||||||||||  ||||| || |||||||||  |  |||||||||||| || |||||||| || | |||    
T  5323063 tattatacccttatttattgaatttcatcaaacttaactactttactaattataattaataagtgtattttagtaaatgatattaattttatcactgaaa 5322964  T
Q  318 tcaacacaattaatcatttccttaataattgtgcacaaatcttaaacgacta 369  Q
    |||||| ||||||||||||  |||||||| ||||||||| ||||||| ||||    
T  5322963 tcaacataattaatcattt--ttaataatcgtgcacaaaccttaaacaacta 5322914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 163 - 342
Target Start/End: Complemental strand, 3901330 - 3901151
Alignment:
Q  163 ctcaaaataattgtcactttacaataccaatgcaatatttattannnnnnnccactattatactcttatttattgaatttcatcaaacttaactactcca 262  Q
    |||||||||||||| ||| |  |||||||||| || ||||||||       ||| |||||||| |||||||||||||||||||| ||||||| ||| |||    
T  3901330 ctcaaaataattgttactcttgaataccaatgtaacatttattatttttttccattattatacccttatttattgaatttcatccaacttaagtacccca 3901231  T
Q  263 ctaactacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaacacaattaatcatttccttaa 342  Q
    |||||||||| ||||||    ||||||||||||| || |||||||| |||| |||| || |||||||||||||| |||||    
T  3901230 ctaactacaactaataagaatgttttagtaaatgatattaattttatcattgaaattaatacaattaatcattttcttaa 3901151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 227 - 345
Target Start/End: Original strand, 52290891 - 52291009
Alignment:
Q  227 cttatttattgaatttcatcaaacttaactactccactaactacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaacacaa 326  Q
    ||||||||||||| || ||  |||||||||||||||||||||| ||||||||| |  |||||| |||||| ||||||||||||||| |||||||| ||||    
T  52290891 cttatttattgaactttattcaacttaactactccactaactataattaataaggctgttttaataaatggtactaattttaccatcaaaatcaatacaa 52290990  T
Q  327 ttaatcatttccttaataa 345  Q
    |||||||||| ||||||||    
T  52290991 ttaatcattttcttaataa 52291009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 228 - 356
Target Start/End: Original strand, 19611908 - 19612035
Alignment:
Q  228 ttatttattgaatttcatcaaacttaactactccactaactacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaacacaat 327  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||| |   |||||||||||  || |||||||| |||| |||||||||||||    
T  19611908 ttatttattgaatttcatcaaacttaactactccactaacaacaattaataaggatattttagtaaattata-taattttaacattgaaatcaacacaat 19612006  T
Q  328 taatcatttccttaataattgtgcacaaa 356  Q
    |||||| || ||||| ||| || ||||||    
T  19612007 taatcactttcttaaaaatcgtacacaaa 19612035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 234 - 374
Target Start/End: Original strand, 43719272 - 43719411
Alignment:
Q  234 attgaatttcatcaaacttaactactccactaactacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaacacaattaatca 333  Q
    |||||||| |||| || ||||||||||||||||||||||||||||| |  |||| ||| |||| || |||||||||||||||||||||||||||||||||    
T  43719272 attgaattccatccaatttaactactccactaactacaattaataaggatgtttcagtgaatgata-taattttaccattaaaatcaacacaattaatca 43719370  T
Q  334 tttccttaataattgtgcacaaatcttaaacgactaatatt 374  Q
    |||  ||||| || ||| |||||  |||| |||||| ||||    
T  43719371 ttttattaatgatcgtgtacaaactttaaccgactattatt 43719411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 163 - 374
Target Start/End: Complemental strand, 31158691 - 31158492
Alignment:
Q  163 ctcaaaataattgtcactttacaataccaatgcaatatttattannnnnnnccactattatactcttatttattgaatttcatcaaacttaactactcca 262  Q
    |||||||||||| |||||||||||||| |||||| |||||||||       | ||||||||||  ||||||||||||||||||| |||||||||| ||      
T  31158691 ctcaaaataattctcactttacaatacaaatgcagtatttattatttttttc-actattataccattatttattgaatttcatctaacttaactattc-- 31158595  T
Q  263 ctaactacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaacacaattaatcatttccttaataattgtgcacaaatcttaa 362  Q
            || |||||   | |||||||||||||||| ||||||||| ||  |||||| |||||||||||||||  |||||||| ||||||||| |||||    
T  31158594 --------aaataataggagtgttttagtaaatgttattaattttactatcgaaatcagcacaattaatcattt-tttaataatcgtgcacaaaccttaa 31158504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 302 - 376
Target Start/End: Complemental strand, 33491125 - 33491051
Alignment:
Q  302 aattttaccattaaaatcaacacaattaatcatttccttaataattgtgcacaaatcttaaacgactaatattgt 376  Q
    |||||||| ||| |||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||    
T  33491125 aattttactattgaaatcaacacaattaatcatttccttaataatcgtgcacaaaccttaaacgactaatattgt 33491051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 216 - 372
Target Start/End: Complemental strand, 49447919 - 49447766
Alignment:
Q  216 actattatactcttatttattgaatttcatcaaacttaactactccactaactacaattaataatggagttttagtaaatgttactaattttaccattaa 315  Q
    |||||||||| |||||||||| |||||||||||| ||||||| || |||||||||||||||||| ||  |||| ||||||  || || |||   | || |    
T  49447919 actattatacccttatttattaaatttcatcaaatttaactattctactaactacaattaataagggtattttggtaaataatattatttt---cgttga 49447823  T
Q  316 aatcaacacaattaatcatttccttaataattgtgcacaaatcttaaacgactaata 372  Q
    |||||||||||||||||||||| ||||| || || ||||||  ||||||||||||||    
T  49447822 aatcaacacaattaatcatttcgttaattatcgtacacaaacattaaacgactaata 49447766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 218 - 366
Target Start/End: Original strand, 19609288 - 19609436
Alignment:
Q  218 tattatactcttatttattgaatttcatcaaacttaactactccactaactacaattaataatggagttttagtaaatgttactaattttaccattaaaa 317  Q
    ||||||||  ||||||||||||||| |||||||||| ||||||||||||| |||| ||||||     |||| ||||||| || ||||||||| ||| |||    
T  19609288 tattatacatttatttattgaattttatcaaacttatctactccactaacaacaagtaataagaatatttttgtaaatgatattaattttacgattgaaa 19609387  T
Q  318 tcaacacaattaatcatttccttaataattgtgcacaaatcttaaacga 366  Q
    ||||||||| ||||||||| ||||| | |  | ||||||||||||||||    
T  19609388 tcaacacaaataatcattttcttaaaattcatacacaaatcttaaacga 19609436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 222 - 342
Target Start/End: Complemental strand, 30682188 - 30682068
Alignment:
Q  222 atactcttatttattgaatttcatcaaacttaactactccactaactacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaa 321  Q
    ||||| |||||||||||||||| || ||||||| || |||| ||||||||||||||||     |||||||||||| |||| |||||| ||||||||| ||    
T  30682188 atactattatttattgaatttcgtccaacttaattattccattaactacaattaataagattattttagtaaatgatactcattttaacattaaaattaa 30682089  T
Q  322 cacaattaatcatttccttaa 342  Q
     ||||||||||||||||||||    
T  30682088 aacaattaatcatttccttaa 30682068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 262 - 369
Target Start/End: Original strand, 49830162 - 49830270
Alignment:
Q  262 actaactacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaacacaattaatca-tttccttaataattgtgcacaaatctt 360  Q
    |||||||||||||||||||||  |||||||||||| || ||||||||| ||| ||||||||||||||||||| |||  |||||||| |||||||||  ||    
T  49830162 actaactacaattaataatggtattttagtaaatgatattaattttactattgaaatcaacacaattaatcattttttttaataatcgtgcacaaacgtt 49830261  T
Q  361 aaacgacta 369  Q
    |||||||||    
T  49830262 aaacgacta 49830270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 214 - 336
Target Start/End: Original strand, 12904849 - 12904972
Alignment:
Q  214 ccactattatactcttatttattgaatttcatcaaacttaactactccactaactacaattaataatgga-gttttagtaaatgttactaattttaccat 312  Q
    |||||||||||| |||||||||||||||||||| ||||||| ||||||||||||||||||||||||  ||  ||||  |||||  |||||||||||  ||    
T  12904849 ccactattatacccttatttattgaatttcatccaacttaattactccactaactacaattaataaaagatattttgataaatcatactaattttataat 12904948  T
Q  313 taaaatcaacacaattaatcattt 336  Q
    | ||||||||| ||||||| ||||    
T  12904949 tgaaatcaacataattaattattt 12904972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 239 - 350
Target Start/End: Complemental strand, 54477564 - 54477454
Alignment:
Q  239 atttcatcaaacttaactactccactaactacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaacacaattaatcatttcc 338  Q
    |||||||  ||||||||||||||| ||||||||||||||||     |||||||||||| || |||||||||||||||||||||||||||||| ||||| |    
T  54477564 atttcattcaacttaactactccattaactacaattaataaaaatattttagtaaatgatattaattttaccattaaaatcaacacaattaaccattt-c 54477466  T
Q  339 ttaataattgtg 350  Q
    |||| |||||||    
T  54477465 ttaaaaattgtg 54477454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 167 - 374
Target Start/End: Original strand, 23068137 - 23068345
Alignment:
Q  167 aaataattgtcactttacaataccaatgcaatatttattannnnnnnccactattatactcttatttattgaatttcatcaaacttaactactccactaa 266  Q
    |||||||||| ||||||||||| |||| ||| ||||||||       | | ||||||||| ||||||||||||||||||| ||||||| || | ||| ||    
T  23068137 aaataattgttactttacaatatcaatacaacatttattatttttgtc-attattatacttttatttattgaatttcatctaacttaaatatttcacaaa 23068235  T
Q  267 ctacaattaataatggagttttagtaaatgttacta--att-ttaccattaaaatcaacacaattaatcatttccttaataattgtgcacaaatcttaaa 363  Q
    ||||||||||||| || |||| ||| |||| |||||  ||| |||||| ||||||||||| ||||||| |||| ||| |||||  ||||||||  |||||    
T  23068236 ctacaattaataa-ggtgtttcagtgaatgctactattattcttaccactaaaatcaacataattaattattttcttgataatcatgcacaaactttaaa 23068334  T
Q  364 cgactaatatt 374  Q
     ||||||||||    
T  23068335 tgactaatatt 23068345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 262 - 391
Target Start/End: Complemental strand, 50035299 - 50035170
Alignment:
Q  262 actaactacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaacacaattaatcatttccttaataattgtgcacaaatctta 361  Q
    ||||||||||||||| || || ||||| ||||||| |||||||||||  ||| ||||||||| ||||| |||||| |||||||||  |||||||| ||||    
T  50035299 actaactacaattaacaacggtgttttggtaaatgctactaattttattattgaaatcaacataattattcattttcttaataatcatgcacaaacctta 50035200  T
Q  362 aacgactaatattgtttgacggaggtagta 391  Q
    || | ||||||||||  |||||||| ||||    
T  50035199 aaagtctaatattgtgagacggagggagta 50035170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 163 - 295
Target Start/End: Complemental strand, 33491542 - 33491408
Alignment:
Q  163 ctcaaaataattgtcactttacaataccaatgcaatatttattannnnnnnc-cactattatactcttatttattgaa-tttcatcaaacttaactactc 260  Q
    ||||||||||||||||||||||||||| |||| | ||||||| |       | ||||||||||| |||||||||| || ||||||  |||||||||||||    
T  33491542 ctcaaaataattgtcactttacaatactaatgtagtatttatgatttttttcgcactattatacccttatttattaaaatttcatacaacttaactactc 33491443  T
Q  261 cactaactacaattaataatggagttttagtaaat 295  Q
    ||||||||| |||||||||  | ||||||||||||    
T  33491442 cactaactataattaataagagtgttttagtaaat 33491408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 228 - 345
Target Start/End: Complemental strand, 36463062 - 36462945
Alignment:
Q  228 ttatttattgaatttcatcaaacttaactactccactaactacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaacacaat 327  Q
    ||||||||| ||||||||| ||||||| |||||||| ||| ||||||||||| |   |||||||||||| ||| ||||||| |||||||||||| || ||    
T  36463062 ttatttatttaatttcatccaacttaattactccacaaacaacaattaataaggttattttagtaaatgctaccaattttaacattaaaatcaatactat 36462963  T
Q  328 taatcatttccttaataa 345  Q
     ||||||||  |||||||    
T  36462962 caatcatttttttaataa 36462945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 222 - 319
Target Start/End: Original strand, 38705168 - 38705267
Alignment:
Q  222 atactcttatttattgaatttcatcaaacttaactactccactaactacaattaataatggagttttagtaaatg---ttactaattttaccattaaaat 318  Q
    ||||||||||||||||||||||||| ||||||| ||||| |||||||||||||||||| | |  |||||||||||    |||||||||||||||| ||||    
T  38705168 atactcttatttattgaatttcatctaacttaattactcaactaactacaattaataa-gaatatttagtaaatgatagtactaattttaccattgaaat 38705266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 166 - 306
Target Start/End: Complemental strand, 27549464 - 27549323
Alignment:
Q  166 aaaataattgtcactttacaataccaatgcaatatttattannnnnnncc-actattatactcttatttattgaatttcatcaaacttaactactccact 264  Q
    ||||||| ||||||||||||||| |||||||| ||||||||       || |||||||||   ||||||||||||||| ||  || |||||||| |||||    
T  27549464 aaaataactgtcactttacaatatcaatgcaacatttattatttttttcccactattataactttatttattgaatttaatttaatttaactacgccact 27549365  T
Q  265 aactacaattaataatggagttttagtaaatgttactaattt 306  Q
    ||||| || ||||||||  |||||||||||||  ||||||||    
T  27549364 aactataactaataatgttgttttagtaaatgcaactaattt 27549323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 298 - 391
Target Start/End: Complemental strand, 51064864 - 51064771
Alignment:
Q  298 tactaattttaccattaaaatcaacacaattaatcatttccttaataattgtgcacaaatcttaaacgactaatattgtttgacggaggtagta 391  Q
    |||||||||||||||| ||| ||||||||||||||||||  |||||| | ||||| |||  |||||||||||||||| |  |||||||| ||||    
T  51064864 tactaattttaccattgaaagcaacacaattaatcatttttttaatattcgtgcataaactttaaacgactaatattatgagacggaggaagta 51064771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 228 - 369
Target Start/End: Original strand, 26467108 - 26467250
Alignment:
Q  228 ttatttattgaatttcatcaaacttaactactcca--ctaactacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaacaca 325  Q
    ||||||||||||||||||| |||||||||||| ||   ||||||||||||||||     ||||| |||||| || |||  ||| ||||||||||||||||    
T  26467108 ttatttattgaatttcatctaacttaactacttcattataactacaattaataaacatattttaataaatgatattaa-cttatcattaaaatcaacaca 26467206  T
Q  326 attaatcatttccttaataattgtgcacaaatcttaaacgacta 369  Q
    || |||||||| ||||  ||||||  | ||| ||||||||||||    
T  26467207 atcaatcattttcttacgaattgtatataaaccttaaacgacta 26467250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 166 - 279
Target Start/End: Complemental strand, 41038571 - 41038458
Alignment:
Q  166 aaaataattgtcactttacaataccaatgcaatatttattannnnnnnccactattatactcttatttattgaatttcatcaaacttaactactccacta 265  Q
    |||||||||||||||||| ||||| ||||||  ||||||||       ||| ||| |||  ||||||||||||| |||| | |||||||||||| || ||    
T  41038571 aaaataattgtcactttaaaatacaaatgcagcatttattatttttttccattataatatccttatttattgaacttcaaccaacttaactacttcatta 41038472  T
Q  266 actacaattaataa 279  Q
    ||||||||||||||    
T  41038471 actacaattaataa 41038458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 216 - 329
Target Start/End: Complemental strand, 24245221 - 24245109
Alignment:
Q  216 actattatactcttatttattgaatttcatcaaacttaactactccactaactacaattaataatggagttttagtaaatgttactaattttaccattaa 315  Q
    ||||||||| | |||||||||||||| ||||  | |||||||||  ||||| |||||||||||||   ||||||||||||  |||||||||||  ||| |    
T  24245221 actattatattattatttattgaattgcatccgatttaactactttactaagtacaattaataat-atgttttagtaaataatactaattttattattga 24245123  T
Q  316 aatcaacacaatta 329  Q
    |||||||| |||||    
T  24245122 aatcaacataatta 24245109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 259 - 341
Target Start/End: Original strand, 27151521 - 27151605
Alignment:
Q  259 tccactaactacaattaataatggagttttag--taaatgttactaattttaccattaaaatcaacacaattaatcatttcctta 341  Q
    ||||||||||| |||||||||||  |||||||  |||||| |||  |||||| |||||||| |||||| ||||||||||||||||    
T  27151521 tccactaactataattaataatgatgttttagagtaaatgatacacattttatcattaaaaccaacactattaatcatttcctta 27151605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 215 - 336
Target Start/End: Original strand, 38512011 - 38512132
Alignment:
Q  215 cactattatactcttatttattgaatttcatcaaacttaactactccactaactacaattaataatggagttttagtaaatgttactaattttaccatta 314  Q
    ||||| ||||| ||||||| || |||| |||||||||||||||||||| ||| |||||| |||||     ||||| |||||| ||  ||||||| |||||    
T  38512011 cactactatacccttattttttaaattccatcaaacttaactactccaataattacaatcaataaatatattttaataaatgatatcaattttatcatta 38512110  T
Q  315 aaatcaacacaattaatcattt 336  Q
    ||||||| | ||||||| ||||    
T  38512111 aaatcaataaaattaattattt 38512132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 256 - 345
Target Start/End: Original strand, 39931656 - 39931745
Alignment:
Q  256 tactccactaactacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaacacaattaatcatttccttaataa 345  Q
    |||| ||||||||| |||||||||  | |||||| |||||| |||  ||||| |||||||||||||||| |||||| ||||| |||||||    
T  39931656 tacttcactaactataattaataagtgtgttttaataaatgatacatattttgccattaaaatcaacactattaataatttctttaataa 39931745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 163 - 276
Target Start/End: Original strand, 40462255 - 40462366
Alignment:
Q  163 ctcaaaataattgtcactttacaataccaatgcaatatttattannnnnnnccactattatactcttatttattgaatttcatcaaacttaactactcca 262  Q
    ||||||||| ||||||||||| |||  |||||||| |||||||        ||||||||||||   |||||||||||||| ||| |||||||||||||      
T  40462255 ctcaaaatagttgtcactttagaatgtcaatgcaacatttatt--tttttcccactattatacaactatttattgaattttatccaacttaactactctt 40462352  T
Q  263 ctaactacaattaa 276  Q
    ||||||||||||||    
T  40462353 ctaactacaattaa 40462366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 228 - 279
Target Start/End: Complemental strand, 41351680 - 41351629
Alignment:
Q  228 ttatttattgaatttcatcaaacttaactactccactaactacaattaataa 279  Q
    ||||||||||||||||||  ||||||||||||||||||||||  ||||||||    
T  41351680 ttatttattgaatttcattcaacttaactactccactaactatcattaataa 41351629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 235 - 374
Target Start/End: Complemental strand, 48541109 - 48540970
Alignment:
Q  235 ttgaatttcatcaaacttaactactccactaactacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaacacaattaatcat 334  Q
    |||||||||||  ||||||||||||| ||||| ||||||||||||     ||||| |||||| || ||||||||  ||  ||||  ||| ||||| ||||    
T  48541109 ttgaatttcattcaacttaactactcaactaattacaattaataagaatattttaataaatgatattaattttattatagaaattgacataattagtcat 48541010  T
Q  335 ttccttaataattgtgcacaaatcttaaacgactaatatt 374  Q
    ||||||||  ||||||||||||  |||||| |||| ||||    
T  48541009 ttccttaaacattgtgcacaaactttaaacaactattatt 48540970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 344 - 377
Target Start/End: Original strand, 32070912 - 32070945
Alignment:
Q  344 aattgtgcacaaatcttaaacgactaatattgtt 377  Q
    ||||||||||||||||||||||||||||||||||    
T  32070912 aattgtgcacaaatcttaaacgactaatattgtt 32070945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 214 - 279
Target Start/End: Original strand, 40194488 - 40194553
Alignment:
Q  214 ccactattatactcttatttattgaatttcatcaaacttaactactccactaactacaattaataa 279  Q
    |||||||||||   ||||||||| |||||| || |||| |||||| ||||||||||||||||||||    
T  40194488 ccactattatatctttatttattaaatttcttccaactcaactacgccactaactacaattaataa 40194553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 301 - 342
Target Start/End: Original strand, 45811727 - 45811768
Alignment:
Q  301 taattttaccattaaaatcaacacaattaatcatttccttaa 342  Q
    ||||||||||||||||||||||| |||||||||||| |||||    
T  45811727 taattttaccattaaaatcaacataattaatcattttcttaa 45811768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 217 - 266
Target Start/End: Complemental strand, 50036559 - 50036510
Alignment:
Q  217 ctattatactcttatttattgaatttcatcaaacttaactactccactaa 266  Q
    |||||||||  |||||||||||||||||||||||||||||| || |||||    
T  50036559 ctattatacctttatttattgaatttcatcaaacttaactattcaactaa 50036510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 166 - 259
Target Start/End: Original strand, 24703599 - 24703692
Alignment:
Q  166 aaaataattgtcactttacaataccaatgcaatatttattannnnnnnccactattatactcttatttattgaatttcatcaaacttaactact 259  Q
    ||||||||||||| |||| | | |||||| ||||||| |||       |||||||||||   ||||||||||||||||||| ||||||||||||    
T  24703599 aaaataattgtcattttaaagtgccaatgtaatatttgttatttctttccactattatatctttatttattgaatttcatccaacttaactact 24703692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 214 - 281
Target Start/End: Complemental strand, 1018989 - 1018922
Alignment:
Q  214 ccactattatactcttatttattgaatttcatcaaacttaactactccactaactacaattaataatg 281  Q
    |||||| |||||| |||||||||| || |||   ||| ||||||||||||||||| ||||||||||||    
T  1018989 ccactaatatacttttatttattgtatctcaagcaacctaactactccactaactgcaattaataatg 1018922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 13 - 52
Target Start/End: Complemental strand, 3985684 - 3985645
Alignment:
Q  13 aaggcaaactaaaggccgcaattaagacgactaggggcgg 52  Q
    ||||||||| |||||||||||||||| |||||||||||||    
T  3985684 aaggcaaaccaaaggccgcaattaaggcgactaggggcgg 3985645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 163 - 206
Target Start/End: Original strand, 30710583 - 30710626
Alignment:
Q  163 ctcaaaataattgtcactttacaataccaatgcaatatttatta 206  Q
    ||||||||||||||||||||| |||| |||||||| ||||||||    
T  30710583 ctcaaaataattgtcactttagaatatcaatgcaacatttatta 30710626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 227 - 364
Target Start/End: Original strand, 30861392 - 30861529
Alignment:
Q  227 cttatttattgaattt-catcaaacttaactactccactaactacaattaataatggagttttagtaaatgttactaatttt-accattaaaatcaacac 324  Q
    |||||||||||||||| ||| ||| |||| ||||| |||||||| ||||||||| |   |||||  |||| | | ||||||| | |||| ||||||||||    
T  30861392 cttatttattgaattttcattaaatttaattactctactaactataattaataaggatattttaacaaat-taaataatttttatcattgaaatcaacac 30861490  T
Q  325 aattaatcatttccttaataattgtgcacaaatcttaaac 364  Q
    ||||||| |||||| ||| |||  ||||||||||||||||    
T  30861491 aattaataatttcc-taaaaatcatgcacaaatcttaaac 30861529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 233 - 292
Target Start/End: Original strand, 37804839 - 37804898
Alignment:
Q  233 tattgaatttcatcaaacttaactactccactaactacaattaataatggagttttagta 292  Q
    |||| |||||||| ||||||||||||||||||||| | ||||||||| ||  ||||||||    
T  37804839 tatttaatttcataaaacttaactactccactaaccataattaataagggtattttagta 37804898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 13 - 80
Target Start/End: Complemental strand, 41380681 - 41380614
Alignment:
Q  13 aaggcaaactaaaggccgcaattaagacgactaggggcgggccacaataaaagtggaagttccaacag 80  Q
    ||||| ||| ||||| |||||||||| |||||||||||||||| |||| || | |||| |||||||||    
T  41380681 aaggctaaccaaaggtcgcaattaaggcgactaggggcgggccgcaattaaggcggaatttccaacag 41380614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 163 - 202
Target Start/End: Original strand, 45710783 - 45710822
Alignment:
Q  163 ctcaaaataattgtcactttacaataccaatgcaatattt 202  Q
    ||||||||||||||||||||| ||||||||| ||||||||    
T  45710783 ctcaaaataattgtcactttataataccaatacaatattt 45710822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 252 - 350
Target Start/End: Original strand, 10973559 - 10973657
Alignment:
Q  252 taactactccactaactacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaacacaattaatcatttccttaataattgtg 350  Q
    |||||| | ||||||||| |||||| || ||  | |||||||||| |||  |||||  ||||||||| ||||  ||||||||||| |||||||||||||    
T  10973559 taactatttcactaactataattaacaacggtctattagtaaatgatacacattttgtcattaaaataaacattattaatcattttcttaataattgtg 10973657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 13 - 79
Target Start/End: Original strand, 14170146 - 14170212
Alignment:
Q  13 aaggcaaactaaaggccgcaattaagacgactaggggcgggccacaataaaagtggaagttccaaca 79  Q
    ||||||||| ||| ||||||||| || || ||||||||||||| ||||||| | |||| ||||||||    
T  14170146 aaggcaaaccaaatgccgcaatttaggcggctaggggcgggccgcaataaaggcggaacttccaaca 14170212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 164 - 194
Target Start/End: Complemental strand, 24569276 - 24569246
Alignment:
Q  164 tcaaaataattgtcactttacaataccaatg 194  Q
    |||||||||||||||||||||||||||||||    
T  24569276 tcaaaataattgtcactttacaataccaatg 24569246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 285 - 355
Target Start/End: Complemental strand, 52206906 - 52206836
Alignment:
Q  285 ttttagtaaatgttactaattttaccattaaaatcaacacaattaatcatttccttaataattgtgcacaa 355  Q
    |||||||||||| || ||||||||||||| |||||||   || ||||||||||||||| |||  |||||||    
T  52206906 ttttagtaaatgatattaattttaccattgaaatcaatttaactaatcatttccttaagaataatgcacaa 52206836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 301 - 342
Target Start/End: Original strand, 7757599 - 7757640
Alignment:
Q  301 taattttaccattaaaatcaacacaattaatcatttccttaa 342  Q
    |||||||| |||| |||||||||||||||||| |||||||||    
T  7757599 taattttatcattgaaatcaacacaattaatcttttccttaa 7757640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 259 - 340
Target Start/End: Original strand, 42278695 - 42278776
Alignment:
Q  259 tccactaactacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaacacaattaatcatttcctt 340  Q
    ||||||||||| ||||||||   | ||||||||||||| |  ||||||||| ||| |||||||  ||| |||||||||||||    
T  42278695 tccactaactataattaatatgagtgttttagtaaatgatgttaattttacgattgaaatcaattcaactaatcatttcctt 42278776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 137; Significance: 2e-71; HSPs: 86)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 163 - 376
Target Start/End: Complemental strand, 11373616 - 11373403
Alignment:
Q  163 ctcaaaataattgtcactttacaataccaatgcaatatttattannnnnnnccactattatactcttatttattgaatttcatcaaacttaactactcca 262  Q
    |||||||||||||| ||||||||||| |||||||  ||||||||       ||||||||||||||||||||||||||||||||| |||||||||||||||    
T  11373616 ctcaaaataattgttactttacaatatcaatgcagcatttattattttttcccactattatactcttatttattgaatttcatccaacttaactactcca 11373517  T
Q  263 ctaactacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaacacaattaatcatttccttaataattgtgcacaaatcttaa 362  Q
    ||||||||||||||||| || ||||||||||||| |||||||||||||||  |||||||||||||||| ||||||||||||||| ||||||||  |||||    
T  11373516 ctaactacaattaataagggtgttttagtaaatgctactaattttaccatcgaaatcaacacaattaaacatttccttaataatcgtgcacaatccttaa 11373417  T
Q  363 acgactaatattgt 376  Q
    ||||||||||||||    
T  11373416 acgactaatattgt 11373403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 163 - 376
Target Start/End: Complemental strand, 41506253 - 41506041
Alignment:
Q  163 ctcaaaataattgtcactttacaataccaatgcaatatttattannnnnnnccactattatactcttatttattgaatttcatcaaacttaactactcca 262  Q
    |||||||||||| ||||||||||||| |||||||||||||||||        || ||||||||||||||||||||||||||||| |||||||||||||||    
T  41506253 ctcaaaataattatcactttacaatatcaatgcaatatttattaatttttttcaatattatactcttatttattgaatttcatccaacttaactactcca 41506154  T
Q  263 ctaactacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaacacaattaatcatttccttaataattgtgcacaaatcttaa 362  Q
    |||||||||||||||||  | ||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||| ||||| ||| ||| |    
T  41506153 ctaactacaattaataagagtgttttagtaaatgctactaattttaccattaaaattaacacaattaatcatttccttaataatcgtgcataaacctt-a 41506055  T
Q  363 acgactaatattgt 376  Q
    ||||||| ||||||    
T  41506054 acgactattattgt 41506041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 163 - 374
Target Start/End: Original strand, 83325 - 83537
Alignment:
Q  163 ctcaaaataattgtcactttacaataccaatgcaatatttattannnnnnn-ccactattatactcttatttattgaatttcatcaaacttaactactcc 261  Q
    ||||||||||||||||||||| ||||||||||||  ||||||||        ||| ||| ||||||||||||||||||||||||||||||||||||||||    
T  83325 ctcaaaataattgtcactttagaataccaatgcagcatttattattttttttccattatcatactcttatttattgaatttcatcaaacttaactactcc 83424  T
Q  262 actaactacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaacacaattaatcatttccttaataattgtgcacaaatctta 361  Q
     |||||||||||||||||    ||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||| ||||    
T  83425 gctaactacaattaataagaatgttttagtaaatgatactaattttaccatcaaaatcaacacaattaatcatttccttaataattgtgcataaacctta 83524  T
Q  362 aacgactaatatt 374  Q
    |||||||| ||||    
T  83525 aacgactattatt 83537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 163 - 374
Target Start/End: Complemental strand, 759279 - 759068
Alignment:
Q  163 ctcaaaataattgtcactttacaataccaatgcaatatttattannnnnnnccactattatactcttatttattgaatttcatcaaacttaactactcca 262  Q
    ||||||||||||||||||||| ||||||||||||  ||||||||       ||| |||||||| |||||||||||||||||||| ||||||||||||||     
T  759279 ctcaaaataattgtcactttagaataccaatgcagcatttattatttttttccattattatacccttatttattgaatttcatccaacttaactactccg 759180  T
Q  263 ctaactacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaacacaattaatcatttccttaataattgtgcacaaatcttaa 362  Q
    ||||||||||||||||| |  ||||||||||||| ||||| ||||||||| ||||||||||||||||||||||||||||||||||||||| ||| |||||    
T  759179 ctaactacaattaataaggatgttttagtaaatgatactagttttaccatcaaaatcaacacaattaatcatttccttaataattgtgcataaaccttaa 759080  T
Q  363 acgactaatatt 374  Q
    | ||||| ||||    
T  759079 atgactattatt 759068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 163 - 374
Target Start/End: Original strand, 34947441 - 34947652
Alignment:
Q  163 ctcaaaataattgtcactttacaataccaatgcaatatttattannnnnnnccactattatactcttatttattgaatttcatcaaacttaactactcca 262  Q
    ||||||||||||||||||||| ||||||||||||| ||||||||       ||| |||||||| || ||||||||||||||||| |||||||||||||||    
T  34947441 ctcaaaataattgtcactttagaataccaatgcaacatttattatttttttccattattataccctcatttattgaatttcatccaacttaactactcca 34947540  T
Q  263 ctaactacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaacacaattaatcatttccttaataattgtgcacaaatcttaa 362  Q
    ||||||||||||||||| || ||||||||||||| || ||||||||||||| ||||||||||||||||||||||| |||||||   |||||||| |||||    
T  34947541 ctaactacaattaataagggtgttttagtaaatgataataattttaccattgaaatcaacacaattaatcatttctttaataaacatgcacaaaccttaa 34947640  T
Q  363 acgactaatatt 374  Q
    ||||||| ||||    
T  34947641 acgactattatt 34947652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 163 - 376
Target Start/End: Complemental strand, 21350814 - 21350603
Alignment:
Q  163 ctcaaaataattgtcactttacaataccaatgcaatatttattannnnnnn-ccactattatactcttatttattgaatttcatcaaacttaactactcc 261  Q
    ||||||||||||||||||||||||||||||||||  ||||||||        |||||||||||| |||||||||||||||||||| ||||||||||||||    
T  21350814 ctcaaaataattgtcactttacaataccaatgcagcatttattattttttttccactattatacccttatttattgaatttcatccaacttaactactcc 21350715  T
Q  262 actaactacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaacacaattaatcatttccttaataattgtgcacaaatctta 361  Q
    |||||||||||||||||| || ||||||||||||   |||| |||||||||| |||||||||||||||   |||||||||||||| ||||||||| ||||    
T  21350714 actaactacaattaataagggtgttttagtaaatacaactatttttaccattgaaatcaacacaatta---atttccttaataatcgtgcacaaacctta 21350618  T
Q  362 aacgactaatattgt 376  Q
    |||||||||||||||    
T  21350617 aacgactaatattgt 21350603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 164 - 374
Target Start/End: Original strand, 2459413 - 2459621
Alignment:
Q  164 tcaaaataattgtcactttacaataccaatgcaatatttattannnnnnnccactattatactcttatttattgaatttcatcaaacttaactactccac 263  Q
    |||||||||||| ||||||||||||||||||||  ||||||||        ||||||||||| ||||||||||||||||||||  |||||||||||||||    
T  2459413 tcaaaataattgacactttacaataccaatgcagcatttattattttttttcactattatacccttatttattgaatttcatcctacttaactactccac 2459512  T
Q  264 taactacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaacacaattaatcatttccttaataattgtgcacaaatcttaaa 363  Q
    |||||||||||||||| || ||| |||||||||  |||||||||||| || |||||||||||||||||||||||||||||||| |||||||||  |||||    
T  2459513 taactacaattaataagggtgttgtagtaaatg--actaattttaccgttgaaatcaacacaattaatcatttccttaataatcgtgcacaaacattaaa 2459610  T
Q  364 cgactaatatt 374  Q
    |||||||||||    
T  2459611 cgactaatatt 2459621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 118; E-Value: 5e-60
Query Start/End: Original strand, 163 - 392
Target Start/End: Original strand, 23670426 - 23670655
Alignment:
Q  163 ctcaaaataattgtcactttacaataccaatgcaatatttattannnnnnncca-ctattatactcttatttattgaatttcatcaaacttaactactcc 261  Q
    ||||||||||||||||||||||||||| ||||||  ||||||||       ||  |||||||||||||||||||| ||||||||||||||||||||||||    
T  23670426 ctcaaaataattgtcactttacaatactaatgcatcatttattattttccccccgctattatactcttatttattaaatttcatcaaacttaactactcc 23670525  T
Q  262 actaactacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaacacaattaatcatttccttaataattgtgcacaaatctta 361  Q
    ||||||||| ||||||||  | ||||||||||||| || ||||||||||||  ||||||||||||||||| ||| |||||||||||||||||||| ||||    
T  23670526 actaactaccattaataagagtgttttagtaaatgctattaattttaccatggaaatcaacacaattaat-attcccttaataattgtgcacaaacctta 23670624  T
Q  362 aacgactaatattgtttgacggaggtagtag 392  Q
    ||||| |||||||||  |||||||| |||||    
T  23670625 aacgattaatattgtgagacggagggagtag 23670655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 163 - 391
Target Start/End: Original strand, 28103671 - 28103902
Alignment:
Q  163 ctcaaaataattgtcactttacaataccaatgcaatatttattannnnnnn---ccactattatactcttatttattgaatttcatcaaacttaactact 259  Q
    ||||||||||||||||||||||||||| | ||||| ||||||||          |||||||||||| |||||||||||||||||||| |||||||| |||    
T  28103671 ctcaaaataattgtcactttacaatacaattgcaacatttattattttttttttccactattatacgcttatttattgaatttcatccaacttaaccact 28103770  T
Q  260 ccactaactacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaacacaattaatcatttccttaataattgtgcacaaatct 359  Q
     ||||||||||||||||||| || ||||| ||||||| | |||||||||||||| |||||||||||||||||||||| ||||||||| ||||||||| ||    
T  28103771 tcactaactacaattaataagggtgttttggtaaatgctgctaattttaccattgaaatcaacacaattaatcattttcttaataatcgtgcacaaacct 28103870  T
Q  360 taaacgactaatattgtttgacggaggtagta 391  Q
    |||||||| ||||||||  |||||||| ||||    
T  28103871 taaacgacaaatattgtgagacggagggagta 28103902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 166 - 376
Target Start/End: Complemental strand, 34100732 - 34100522
Alignment:
Q  166 aaaataattgtcactttacaataccaatgcaatatttattannnnnnnccactattatactcttatttattgaatttcatcaaacttaactactccacta 265  Q
    |||||||||||||||||||||||| ||||||| ||||||||        ||||||||||| |||||||||||||| ||||| |||||||||||| || ||    
T  34100732 aaaataattgtcactttacaatactaatgcaacatttattatgttttttcactattatacccttatttattgaatgtcatccaacttaactacttcagta 34100633  T
Q  266 actacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaacacaattaatcatttccttaataattgtgcacaaatcttaaacg 365  Q
    |||||||||||||| |   |||||||||||| |||||||||||| ||| |||||||||||||||||||||| ||||||||| ||  |||||||||||||     
T  34100632 actacaattaataaagatattttagtaaatgctactaattttactattgaaatcaacacaattaatcattttcttaataatcgttgacaaatcttaaaca 34100533  T
Q  366 actaatattgt 376  Q
    |||||||||||    
T  34100532 actaatattgt 34100522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 163 - 376
Target Start/End: Complemental strand, 8592628 - 8592415
Alignment:
Q  163 ctcaaaataattgtcactttacaataccaatgcaatatttattannnnnnnccactattatactcttatttattgaatttcatcaaacttaactactcca 262  Q
    |||||||||||| ||| ||||||||| |||||||  ||||||||       | ||||||||||||||||||||| ||||||||| ||||| |||||||||    
T  8592628 ctcaaaataattttcattttacaatatcaatgcagcatttattattttttcctactattatactcttatttattaaatttcatctaactttactactcca 8592529  T
Q  263 ctaactacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaacacaattaatcatttccttaataattgtgcacaaatcttaa 362  Q
    ||||||||||||||||| || |||||| |||||  ||||||||| |||||| ||||||||||||||||||||||| ||||||||  |||||||| |||||    
T  8592528 ctaactacaattaataagggtgttttattaaatactactaatttaaccattgaaatcaacacaattaatcatttctttaataatcatgcacaaaccttaa 8592429  T
Q  363 acgactaatattgt 376  Q
    ||| ||||||||||    
T  8592428 acggctaatattgt 8592415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 167 - 370
Target Start/End: Complemental strand, 24516473 - 24516270
Alignment:
Q  167 aaataattgtcactttacaataccaatgcaatatttattannnnnnnccactattatactcttatttattgaatttcatcaaacttaactactccactaa 266  Q
    |||||||||||| ||||||||| |||||||| ||||||||       |||||||| ||   ||||||||||||||||||| |||||||||||||||||||    
T  24516473 aaataattgtcattttacaatatcaatgcaacatttattatcttttcccactattttatctttatttattgaatttcatccaacttaactactccactaa 24516374  T
Q  267 ctacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaacacaattaatcatttccttaataattgtgcacaaatcttaaacga 366  Q
    ||||||||||||| |   ||||||||||||||||||||||||||||| ||||||||||||||||||||||  |||||||| ||| | ||| |||||||||    
T  24516373 ctacaattaataaggtttttttagtaaatgttactaattttaccattgaaatcaacacaattaatcattttattaataatcgtgtataaaccttaaacga 24516274  T
Q  367 ctaa 370  Q
    ||||    
T  24516273 ctaa 24516270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 163 - 368
Target Start/End: Original strand, 21390235 - 21390441
Alignment:
Q  163 ctcaaaataattgtcactttacaataccaatgcaatatttattannnnnnn-ccactattatactcttatttattgaatttcatcaaacttaactactcc 261  Q
    ||||||||||||||||||||| |||||||||||||  |||||||        ||| |||||||| |||||||||||||||||||| ||||||||||||||    
T  21390235 ctcaaaataattgtcactttataataccaatgcaacgtttattattttttttccattattatacccttatttattgaatttcatctaacttaactactcc 21390334  T
Q  262 actaactacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaacacaattaatcatttccttaataattgtgcacaaatctta 361  Q
    |||||||||||| ||||| |  ||||||||||||| || || ||||||||| ||||| ||||||||||||||||||||||||||| ||||| ||| ||||    
T  21390335 actaactacaatcaataaggatgttttagtaaatgatattagttttaccatcaaaattaacacaattaatcatttccttaataatcgtgcataaacctta 21390434  T
Q  362 aacgact 368  Q
    |||||||    
T  21390435 aacgact 21390441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 163 - 369
Target Start/End: Complemental strand, 21760172 - 21759966
Alignment:
Q  163 ctcaaaataattgtcactttacaataccaatgcaatatttattannnnnnnccactattatactcttatttattgaatttcatcaaacttaactactcca 262  Q
    ||||||||||||||||||||| |||| |||||||| ||||||||       ||  |||||||| || | ||||||||||||||| |||||||||||||||    
T  21760172 ctcaaaataattgtcactttagaatatcaatgcaacatttattatatttttcctttattataccctcaattattgaatttcatccaacttaactactcca 21760073  T
Q  263 ctaactacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaacacaattaatcatttccttaataattgtgcacaaatcttaa 362  Q
     |||||||||||| ||| || |||||| |||||| ||||||||||||||| ||||||||||||||||||||||| |||||||||  |||||||| |||||    
T  21760072 ttaactacaattagtaagggtgttttattaaatgatactaattttaccatcaaaatcaacacaattaatcattttcttaataatcatgcacaaaccttaa 21759973  T
Q  363 acgacta 369  Q
    |||||||    
T  21759972 acgacta 21759966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 163 - 374
Target Start/End: Complemental strand, 28202497 - 28202286
Alignment:
Q  163 ctcaaaataattgtcactttacaataccaatgcaatatttattannnnnnnccactattatactcttatttattgaatttcatcaaacttaactactcca 262  Q
    ||||||||||||||||||||| ||||||||| ||  ||||||||       ||| ||||||||||||||||||||||||||||| ||||| |||||||||    
T  28202497 ctcaaaataattgtcactttagaataccaatacagcatttattatttttttccattattatactcttatttattgaatttcatccaactttactactcca 28202398  T
Q  263 ctaactacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaacacaattaatcatttccttaataattgtgcacaaatcttaa 362  Q
    ||||||||||||||||| |  |||||||||||||  | |||||||||||| |||||||||||||||||| |||| ||||||||  ||||| ||| |||||    
T  28202397 ctaactacaattaataaggatgttttagtaaatgacattaattttaccatcaaaatcaacacaattaattattttcttaataaccgtgcataaaccttaa 28202298  T
Q  363 acgactaatatt 374  Q
    || |||| ||||    
T  28202297 acaactattatt 28202286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 166 - 369
Target Start/End: Complemental strand, 3178391 - 3178186
Alignment:
Q  166 aaaataattgtcactttacaataccaatgcaa--tatttattannnnnnnccactattatactcttatttattgaatttcatcaaacttaactactccac 263  Q
    ||||||||||| |||||| ||||| |||||||  |||||||||       ||| || ||||| |||||||||||||||||||| ||||||||||||||||    
T  3178391 aaaataattgttactttagaatactaatgcaacatatttattatgttttcccattaatatacccttatttattgaatttcatccaacttaactactccac 3178292  T
Q  264 taactacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaacacaattaatcatttccttaataattgtgcacaaatcttaaa 363  Q
    |||||||||||||||| || ||||||||||||| || |||||||||||| |||||||||||||| |||||||| |||||||||  |||||||| ||||||    
T  3178291 taactacaattaataaaggtgttttagtaaatgatattaattttaccatcaaaatcaacacaatcaatcatttacttaataatcatgcacaaaccttaaa 3178192  T
Q  364 cgacta 369  Q
    | ||||    
T  3178191 caacta 3178186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 163 - 374
Target Start/End: Original strand, 9785929 - 9786140
Alignment:
Q  163 ctcaaaataattgtcactttacaataccaatgcaatatttattannnnnnnccactattatactcttatttattgaatttcatcaaacttaactactcca 262  Q
    ||||||||||||||||||||| ||||  ||||||  ||||||||        |  |||||||| |||||||||||||||| ||| |||||||||||| ||    
T  9785929 ctcaaaataattgtcactttaaaatattaatgcagcatttattattatttttctttattatacccttatttattgaattttatccaacttaactacttca 9786028  T
Q  263 ctaactacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaacacaattaatcatttccttaataattgtgcacaaatcttaa 362  Q
    |||||||||||||||||  | |||||||||||||  | |||||||||||| ||||||||||||||||||||||||||||||||| ||||||| | |||||    
T  9786029 ctaactacaattaataagcgtgttttagtaaatgaaattaattttaccatcaaaatcaacacaattaatcatttccttaataatcgtgcacagaccttaa 9786128  T
Q  363 acgactaatatt 374  Q
    ||||||| ||||    
T  9786129 acgactattatt 9786140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 164 - 386
Target Start/End: Complemental strand, 7457607 - 7457386
Alignment:
Q  164 tcaaaataattgtcactttacaataccaatgcaatatttattannnnnnnccactattatactcttatttattgaatttcatcaaacttaactactccac 263  Q
    ||||||||||| ||||||||||||| |||||||| ||||||||       ||||||||||||||||||||||||||||| ||  ||||||| || ||| |    
T  7457607 tcaaaataattatcactttacaatatcaatgcaacatttattatttttt-ccactattatactcttatttattgaatttaatttaacttaattattccgc 7457509  T
Q  264 taactacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaacacaattaatcatttccttaataattgtgcacaaatcttaaa 363  Q
    |||||||| ||||||| ||  ||||||||||||| ||||||||||||||| ||||||||| ||||||||||||  |||||||| |||||||||  |||||    
T  7457508 taactacatttaataagggtcttttagtaaatgtaactaattttaccattgaaatcaacataattaatcatttttttaataatcgtgcacaaacattaaa 7457409  T
Q  364 cgactaatattgtttgacggagg 386  Q
      |||||||||||  ||||||||    
T  7457408 taactaatattgtgagacggagg 7457386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 218 - 366
Target Start/End: Original strand, 38391744 - 38391892
Alignment:
Q  218 tattatactcttatttattgaatttcatcaaacttaactactccactaactacaattaataatggagttttagtaaatgttactaattttaccattaaaa 317  Q
    ||||||||| ||||||||||||||||||| ||||||| || |||||||||||||||||| ||  | ||||||||||||| ||||||||||||||| ||||    
T  38391744 tattatacttttatttattgaatttcatccaacttaattattccactaactacaattaacaagagtgttttagtaaatgatactaattttaccatcaaaa 38391843  T
Q  318 tcaacacaattaatcatttccttaataattgtgcacaaatcttaaacga 366  Q
    ||||||||||||||||||| ||||||||||||||| ||| |||||||||    
T  38391844 tcaacacaattaatcattttcttaataattgtgcataaaccttaaacga 38391892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 163 - 374
Target Start/End: Original strand, 40076259 - 40076467
Alignment:
Q  163 ctcaaaataattgtcactttacaataccaatgcaatatttattannnnnnnccactattatactcttatttattgaatttcatcaaacttaactactcca 262  Q
    ||||||||||||||||||||| ||||||||||||  ||||||||       ||| ||| | || |||||||||||||||||||| |||||||||| ||      
T  40076259 ctcaaaataattgtcactttataataccaatgcagcatttattatttttttccattatcacacccttatttattgaatttcatccaacttaactaatc-- 40076356  T
Q  263 ctaactacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaacacaattaatcatttccttaataattgtgcacaaatcttaa 362  Q
     ||| ||||||||||||| | ||||||||||||| ||||||||||||||| ||||| |||||||||||||||||| |||||||| ||||| ||| |||||    
T  40076357 -taagtacaattaataatagtgttttagtaaatgatactaattttaccatcaaaattaacacaattaatcatttctttaataatcgtgcataaaccttaa 40076455  T
Q  363 acgactaatatt 374  Q
    ||||||| ||||    
T  40076456 acgactattatt 40076467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 163 - 374
Target Start/End: Original strand, 7463153 - 7463365
Alignment:
Q  163 ctcaaaataattgtcactttacaataccaa-tgcaatatttattannnnnnnccactattatactcttatttattgaatttcatcaaacttaactactcc 261  Q
    ||||||||||| |||||||||||||| ||| ||||  ||||||||        ||||||| ||   ||||||||||||||||||| ||||||||||||||    
T  7463153 ctcaaaataatcgtcactttacaataacaaatgcatcatttattattatttttcactattctatctttatttattgaatttcatccaacttaactactcc 7463252  T
Q  262 actaactacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaacacaattaatcatttccttaataattgtgcacaaatctta 361  Q
    |||||||||||||||| | ||  ||| |||||||| ||||||||||| |||| |||||||||||||||||||||||||||||||  ||||||||  ||||    
T  7463253 actaactacaattaatgagggtatttaagtaaatgctactaattttatcattgaaatcaacacaattaatcatttccttaataaccgtgcacaatcctta 7463352  T
Q  362 aacgactaatatt 374  Q
    |||||||||||||    
T  7463353 aacgactaatatt 7463365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 163 - 374
Target Start/End: Original strand, 42935599 - 42935813
Alignment:
Q  163 ctcaaaataattgtcactttacaataccaatgcaatatttattannnnnnnccactattatactcttatttattgaatttcatcaaacttaactactcc- 261  Q
    ||||||||||||||||||||| ||||| ||||||| ||||||||       | | ||| |||||||||||||||||| |||||| ||||||||| ||||     
T  42935599 ctcaaaataattgtcactttagaatacaaatgcaacatttattattttttccaattataatactcttatttattgaacttcatccaacttaactcctcct 42935698  T
Q  262 --actaactacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaacacaattaatcatttccttaataattgtgcacaaatct 359  Q
      |||||||||||||||||| || ||||||||||||| || |||||||||||| ||||||||||||||||||||||| ||||||||  |||||  || ||    
T  42935699 ccactaactacaattaataagggtgttttagtaaatgatattaattttaccatcaaaatcaacacaattaatcattttcttaataaccgtgcatcaacct 42935798  T
Q  360 taaacgactaatatt 374  Q
    |||||||||| ||||    
T  42935799 taaacgactattatt 42935813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 163 - 364
Target Start/End: Original strand, 37245631 - 37245834
Alignment:
Q  163 ctcaaaataattgtcactttacaataccaatgcaatatttattannnnnnnccactattatactcttatttattgaatttcatcaaacttaactactcca 262  Q
    ||||||||||||||||||||||||||||||||||| ||||||||        ||||||||||| |||||||||||||||||||| |||||||| ||||||    
T  37245631 ctcaaaataattgtcactttacaataccaatgcaacatttattattttttctcactattatacccttatttattgaatttcatccaacttaaccactcca 37245730  T
Q  263 ctaactacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaacacaattaatcatttcctt---aataattgtgcacaaatct 359  Q
    || | ||||||||||||  | ||||||||||||| |||||| ||||||||| ||||||||| |||||||| ||| |||   |||||| ||||||||| ||    
T  37245731 cttattacaattaataagagtgttttagtaaatgctactaa-tttaccattgaaatcaacagaattaatctttttcttataaataatcgtgcacaaacct 37245829  T
Q  360 taaac 364  Q
    |||||    
T  37245830 taaac 37245834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 163 - 375
Target Start/End: Complemental strand, 19271920 - 19271709
Alignment:
Q  163 ctcaaaataattgtcactttacaataccaatgcaatatttattannnnnnnccactattatactcttatttattgaatttcatcaaacttaactactcca 262  Q
    |||||||||||||| |||||||||||||||||||| ||||||||       ||| |||||||| |||||||||| | ||||||| |||||||||||||||    
T  19271920 ctcaaaataattgttactttacaataccaatgcaacatttattatttttt-ccaatattatacccttatttattaattttcatccaacttaactactcca 19271822  T
Q  263 ctaactacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaacacaattaatcatttccttaataattgtgcacaaatcttaa 362  Q
    |||||||||||||||||  |  ||||||| ||||  |||||||| | |||| ||||||||||||||||||||||  |||||||| ||||||||   ||||    
T  19271821 ctaactacaattaataaaagtattttagtcaatgccactaatttgatcattgaaatcaacacaattaatcatttttttaataatcgtgcacaagcattaa 19271722  T
Q  363 acgactaatattg 375  Q
    |||||||| ||||    
T  19271721 acgactaacattg 19271709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 214 - 376
Target Start/End: Original strand, 22738693 - 22738855
Alignment:
Q  214 ccactattatactcttatttattgaatttcatcaaacttaactactccactaactacaattaataatggagttttagtaaatgttactaattttaccatt 313  Q
    ||||||||||||  ||||||||| ||||||||| |||||||||| || |||||||||||||||| | |   |||||||||||| ||||||||||||||||    
T  22738693 ccactattatacctttatttattaaatttcatccaacttaactaatctactaactacaattaatgaggatattttagtaaatgatactaattttaccatt 22738792  T
Q  314 aaaatcaacacaattaatcatttccttaataattgtgcacaaatcttaaacgactaatattgt 376  Q
     ||||| ||||||||||||||||| |||||||| ||||| ||| |||||||||||||||||||    
T  22738793 gaaatctacacaattaatcatttctttaataatcgtgcataaaccttaaacgactaatattgt 22738855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 163 - 345
Target Start/End: Original strand, 43873864 - 43874046
Alignment:
Q  163 ctcaaaataattgtcactttacaataccaatgcaatatttattannnnnnnccactattatactcttatttattgaatttcatcaaacttaactactcca 262  Q
    ||||||||||||||||||||| |||| |||||||  ||||||||       ||| ||| ||||  ||||||||| || |||||| |||||||||||||||    
T  43873864 ctcaaaataattgtcactttagaatatcaatgcagcatttattattttttcccattataatacatttatttattaaacttcatccaacttaactactcca 43873963  T
Q  263 ctaactacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaacacaattaatcatttccttaataa 345  Q
    ||||||||| ||||||| || ||||||||||||| || |||||||||||| |||||||||||||||||||||||| |||||||    
T  43873964 ctaactacatttaataagggtgttttagtaaatgatattaattttaccatcaaaatcaacacaattaatcatttctttaataa 43874046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 214 - 374
Target Start/End: Complemental strand, 46478430 - 46478270
Alignment:
Q  214 ccactattatactcttatttattgaatttcatcaaacttaactactccactaactacaattaataatggagttttagtaaatgttactaattttaccatt 313  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||| | |||||||||||||||| ||  |||||||||||| |||||| ||||| |||    
T  46478430 ccactattatactcttatttattgaatttcatccaacttaactactcaattaactacaattaataagggtattttagtaaatgctactaactttactatt 46478331  T
Q  314 aaaatcaacacaattaatcatttccttaataattgtgcacaaatcttaaacgactaatatt 374  Q
    ||||| |||||||||||||||||  |||||||| ||| |  ||  ||||||||||||||||    
T  46478330 aaaattaacacaattaatcatttaattaataatcgtgtatgaactttaaacgactaatatt 46478270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 214 - 376
Target Start/End: Original strand, 5524369 - 5524534
Alignment:
Q  214 ccactattatactcttatttattga---atttcatcaaacttaactactccactaactacaattaataatggagttttagtaaatgttactaattttacc 310  Q
    ||||||||||||  ||||||||| |   |||||||| ||||||||||||| |||||||| |||||||||  | |||||| ||||||||||||||||||||    
T  5524369 ccactattatacctttatttattaataaatttcatccaacttaactactcaactaactataattaataaaagtgttttattaaatgttactaattttacc 5524468  T
Q  311 attaaaatcaacacaattaatcatttccttaataattgtgcacaaatcttaaacgactaatattgt 376  Q
    ||| |||||||||||||||||||||| ||||||||| |||||||||  ||||||||| ||||||||    
T  5524469 attgaaatcaacacaattaatcattttcttaataatcgtgcacaaactttaaacgacaaatattgt 5524534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 163 - 369
Target Start/End: Original strand, 48608808 - 48609009
Alignment:
Q  163 ctcaaaataattgtcactttacaataccaatgcaatatttattannnnnnnccactattatactcttatttattgaatttcatcaaacttaactactcca 262  Q
    ||||||||||||||||||||| ||||  |||||| |||||||||       ||| ||||||||||||||||||||||||||||| |||||||||||  ||    
T  48608808 ctcaaaataattgtcactttaaaatattaatgcagtatttattatttttt-ccattattatactcttatttattgaatttcatccaacttaactacatca 48608906  T
Q  263 ctaactacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaacacaattaatcatttccttaataattgtgcacaaatcttaa 362  Q
    |||||||| |||||||| |  ||||||||||    ||||| ||||||||| |||||||||||||||||||||||||||||||||  |||| ||| || ||    
T  48608907 ctaactacgattaataaggatgttttagtaa----tactagttttaccatcaaaatcaacacaattaatcatttccttaataatcatgcataaacctcaa 48609002  T
Q  363 acgacta 369  Q
    |||||||    
T  48609003 acgacta 48609009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 163 - 374
Target Start/End: Original strand, 27920927 - 27921140
Alignment:
Q  163 ctcaaaataattgtcactttacaataccaatgcaatatttattannnnnnnccac--tattatactcttatttattgaatttcatcaaacttaactactc 260  Q
    ||||||||||||||||||||| ||||  ||||||| ||||||||       || |  ||| ||||||||||| |||||| |||||| |||||||||| |     
T  27920927 ctcaaaataattgtcactttagaatattaatgcaacatttattatttttttccccattataatactcttattgattgaacttcatccaacttaactaatg 27921026  T
Q  261 cactaactacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaacacaattaatcatttccttaataattgtgcacaaatctt 360  Q
    |||||||||||||||||||  | |||||| |||||| |||||||||||||||||||||||||| |||||||||||| |||||||| ||||||  || |||    
T  27921027 cactaactacaattaataagagtgttttaataaatgatactaattttaccattaaaatcaacataattaatcattttcttaataactgtgcatcaacctt 27921126  T
Q  361 aaacgactaatatt 374  Q
    |||| |||| ||||    
T  27921127 aaacaactattatt 27921140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 214 - 369
Target Start/End: Original strand, 26974018 - 26974176
Alignment:
Q  214 ccactattatactcttatttattgaatttcatcaaacttaactactccactaactacaattaataatggagttttagtaaatgtt---actaattttacc 310  Q
    ||||||||||||  ||||||| | ||||||||  ||||||||||||||||||||||||||||||||  |  |||||||||||| |   | ||||||||||    
T  26974018 ccactattatacatttatttaataaatttcattcaacttaactactccactaactacaattaataagagtattttagtaaatgatgatattaattttacc 26974117  T
Q  311 attaaaatcaacacaattaatcatttccttaataattgtgcacaaatcttaaacgacta 369  Q
    ||| |||||||||||||||||||||||||||||||| ||||||||| ||||||||||||    
T  26974118 attgaaatcaacacaattaatcatttccttaataatcgtgcacaaaccttaaacgacta 26974176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 164 - 346
Target Start/End: Original strand, 33819154 - 33819338
Alignment:
Q  164 tcaaaataattgtcactttacaataccaatgcaatatttattannnnnnnc--cactattatactcttatttattgaatttcatcaaacttaactactcc 261  Q
    |||||||||||||||||||||||||||||||||  ||||||||          ||||||||||| |||||||| ||||||||||  ||||| ||||||||    
T  33819154 tcaaaataattgtcactttacaataccaatgcagcatttattattattattttcactattatacccttatttaatgaatttcattcaacttcactactcc 33819253  T
Q  262 actaactacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaacacaattaatcatttccttaataat 346  Q
    || ||| |||||||||||  | | ||| ||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||    
T  33819254 acaaacaacaattaataagagtgattttgtaaatgctactaattttaccattgaaatcaacacaattaatcatttccttaataat 33819338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 242 - 374
Target Start/End: Complemental strand, 16560679 - 16560547
Alignment:
Q  242 tcatcaaacttaactactccactaactacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaacacaattaatcatttcctta 341  Q
    ||||| ||||||||||| |||||||||||||||||||| |  ||||||||||||| ||||| ||||||||| ||||| ||||||||||||||||||||||    
T  16560679 tcatccaacttaactaccccactaactacaattaataaggatgttttagtaaatgatactagttttaccatcaaaataaacacaattaatcatttcctta 16560580  T
Q  342 ataattgtgcacaaatcttaaacgactaatatt 374  Q
    ||||| ||||| |||||||||| ||||| ||||    
T  16560579 ataatcgtgcataaatcttaaatgactattatt 16560547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 242 - 374
Target Start/End: Original strand, 16604983 - 16605115
Alignment:
Q  242 tcatcaaacttaactactccactaactacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaacacaattaatcatttcctta 341  Q
    ||||| ||||||||||| |||||||||||||||||||| |  ||||||||||||| ||||| ||||||||| ||||| ||||||||||||||||||||||    
T  16604983 tcatccaacttaactaccccactaactacaattaataaggatgttttagtaaatgatactagttttaccatcaaaataaacacaattaatcatttcctta 16605082  T
Q  342 ataattgtgcacaaatcttaaacgactaatatt 374  Q
    ||||| ||||| |||||||||| ||||| ||||    
T  16605083 ataatcgtgcataaatcttaaatgactattatt 16605115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 214 - 375
Target Start/End: Complemental strand, 29835550 - 29835390
Alignment:
Q  214 ccactattatactcttatttattgaatttcatcaaacttaactactccactaactacaattaataatggagttttagtaaatgttactaattttaccatt 313  Q
    |||||||||||   |||||||||||||| |||| |||| |||||||||  ||||| ||||||||||  | ||||||||||||| ||||||||||||||||    
T  29835550 ccactattatatctttatttattgaattacatccaact-aactactccgttaactgcaattaataagagtgttttagtaaatgctactaattttaccatt 29835452  T
Q  314 aaaatcaacacaattaatcatttccttaataattgtgcacaaatcttaaacgactaatattg 375  Q
     ||||||||| |||||||||||||||||||||  | ||||||| ||||||||| ||||||||    
T  29835451 taaatcaacataattaatcatttccttaataagcgcgcacaaaccttaaacgattaatattg 29835390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 228 - 365
Target Start/End: Original strand, 30865973 - 30866110
Alignment:
Q  228 ttatttattgaatttcatcaaacttaactactccactaactacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaacacaat 327  Q
    ||||||||||||||||||| ||||||||||||||||||| || |||||||||  |  |||||||||||| || ||||| ||||||| |||| ||||||||    
T  30865973 ttatttattgaatttcatctaacttaactactccactaattataattaataagagtattttagtaaatgatattaattataccattgaaattaacacaat 30866072  T
Q  328 taatcatttccttaataattgtgcacaaatcttaaacg 365  Q
    |||||||||| |||||||| ||||||||| ||||||||    
T  30866073 taatcatttctttaataatcgtgcacaaaccttaaacg 30866110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 163 - 369
Target Start/End: Complemental strand, 32346240 - 32346034
Alignment:
Q  163 ctcaaaataattgtcactttacaataccaatgcaatatttattannnnnnnccactattatactcttatttattgaatttcatcaaacttaactactcca 262  Q
    |||||||||||| ||| |||| ||||| ||||||  ||||||||       ||| |||||||| |||||||||||||||||||  |||||||||||||||    
T  32346240 ctcaaaataattatcattttagaatactaatgcagcatttattatctttttccattattatacccttatttattgaatttcattcaacttaactactcca 32346141  T
Q  263 ctaactacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaacacaattaatcatttccttaataattgtgcacaaatcttaa 362  Q
    |||| || |||||||||  |  |||||||| ||| || ||||||||||||| ||||||||||||| ||| |||||||||||||  || |||||| |||||    
T  32346140 ctaattataattaataagagtattttagtagatgatattaattttaccattgaaatcaacacaatcaattatttccttaataaccgtacacaaaccttaa 32346041  T
Q  363 acgacta 369  Q
    || ||||    
T  32346040 acaacta 32346034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 228 - 374
Target Start/End: Original strand, 13961965 - 13962111
Alignment:
Q  228 ttatttattgaatttcatcaaacttaactactccactaactacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaacacaat 327  Q
    ||||||||| ||||||||| |||||||||||||||||||||||| ||||||| |   ||||| ||| || || |||||||| ||||||||||||||||||    
T  13961965 ttatttattaaatttcatccaacttaactactccactaactacacttaataaggatattttattaagtgatattaattttatcattaaaatcaacacaat 13962064  T
Q  328 taatcatttccttaataattgtgcacaaatcttaaacgactaatatt 374  Q
    ||||||||||||||||||  ||||| ||| |||||| ||||| ||||    
T  13962065 taatcatttccttaataaacgtgcataaaccttaaatgactattatt 13962111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 214 - 374
Target Start/End: Original strand, 16904371 - 16904531
Alignment:
Q  214 ccactattatactcttatttattgaatttcatcaaacttaactactccactaactacaattaataatggagttttagtaaatgttactaattttaccatt 313  Q
    |||||||||||| |||||||||||||||| ||| ||||||| || | ||||||||| ||||||||   |  |||||| || || || ||||||||| |||    
T  16904371 ccactattatacccttatttattgaatttgatccaacttaattatttcactaactataattaatacgagtattttagaaagtgataataattttactatt 16904470  T
Q  314 aaaatcaacacaattaatcatttccttaataattgtgcacaaatcttaaacgactaatatt 374  Q
     |||||||||||||||||||||| ||||| |||| |||||||| |||||||||||| ||||    
T  16904471 gaaatcaacacaattaatcattttcttaaaaattttgcacaaaccttaaacgactattatt 16904531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 224 - 369
Target Start/End: Complemental strand, 31930626 - 31930479
Alignment:
Q  224 actcttatttattgaatttcatcaaacttaac--tactccactaactacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaa 321  Q
    ||||||||||||||||||||||||||||||||  |||||||||||||||||||||||| ||  |||||  ||||   | || ||||||||||||||||||    
T  31930626 actcttatttattgaatttcatcaaacttaactatactccactaactacaattaataagggtattttaaaaaattagattagttttaccattaaaatcaa 31930527  T
Q  322 cacaattaatcatttccttaataattgtgcacaaatcttaaacgacta 369  Q
    |||| | ||||||||| |||||||| ||||| |||  |||||||||||    
T  31930526 cacagtcaatcatttctttaataatcgtgcataaactttaaacgacta 31930479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 163 - 301
Target Start/End: Original strand, 25571361 - 25571498
Alignment:
Q  163 ctcaaaataattgtcactttacaataccaatgcaatatttattannnnnnnccactattatactcttatttattgaatttcatcaaacttaactactcca 262  Q
    ||||||||||||||||||||| ||||||||||||| ||||||||         | |||||||| |||||||||||||||||||| |||||||||| ||||    
T  25571361 ctcaaaataattgtcactttagaataccaatgcaacatttattattttttta-attattatacccttatttattgaatttcatccaacttaactattcca 25571459  T
Q  263 ctaactacaattaataatggagttttagtaaatgttact 301  Q
    |||||||||| |||||| ||  |||||||||||| ||||    
T  25571460 ctaactacaactaataagggtattttagtaaatgatact 25571498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 266 - 374
Target Start/End: Original strand, 46211472 - 46211583
Alignment:
Q  266 actacaattaataatggagttttagtaaatgtta---ctaattttaccattaaaatcaacacaattaatcatttccttaataattgtgcacaaatcttaa 362  Q
    |||||||||||||| |  ||||||||||||| ||   ||| ||||||||| ||||||||||||||||||||||||||||||||||||||| ||| |||||    
T  46211472 actacaattaataaggatgttttagtaaatgatagtactagttttaccatcaaaatcaacacaattaatcatttccttaataattgtgcataaaccttaa 46211571  T
Q  363 acgactaatatt 374  Q
    ||||||| ||||    
T  46211572 acgactattatt 46211583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 218 - 322
Target Start/End: Complemental strand, 6495067 - 6494963
Alignment:
Q  218 tattatactcttatttattgaatttcatcaaacttaactactccactaactacaattaataatggagttttagtaaatgttactaattttaccattaaaa 317  Q
    |||||||| |||||||||| ||||||||| ||||| ||||||||||||||||||||||||||  | ||||||||||||   |||||||||||||| ||||    
T  6495067 tattatacccttatttattaaatttcatccaactttactactccactaactacaattaataaaagtgttttagtaaataacactaattttaccatcaaaa 6494968  T
Q  318 tcaac 322  Q
    |||||    
T  6494967 tcaac 6494963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 218 - 363
Target Start/End: Original strand, 49101659 - 49101807
Alignment:
Q  218 tattatactcttatttattgaatttcatcaaacttaactactccactaactacaattaataatggagttt---tagtaaatgttactaattttaccatta 314  Q
    ||||||||| ||||||||||||||||||  |||||||||||||||||||||||||||||||   |  |||   ||||||||| || |||||||| | |||    
T  49101659 tattatacttttatttattgaatttcattcaacttaactactccactaactacaattaatatgagtattttaatagtaaatgatattaattttatcctta 49101758  T
Q  315 aaatcaacacaattaatcatttccttaataattgtgcacaaatcttaaa 363  Q
    |||| ||||||||||||||||| ||||| ||| ||  ||||| ||||||    
T  49101759 aaataaacacaattaatcattttcttaaaaatcgtaaacaaaccttaaa 49101807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 214 - 342
Target Start/End: Complemental strand, 32019053 - 32018924
Alignment:
Q  214 ccactattatactcttatttattgaatttcatcaaacttaactactccactaactacaattaataatggagttttagtaaatgttactaattttaccatt 313  Q
    |||||||||  | |||||||||| ||||||||| ||||||| |||||||||||| |||||||||||  |  |||||||||||| ||  |||||||| |||    
T  32019053 ccactattaatcccttatttattaaatttcatccaacttaattactccactaacaacaattaataagagtattttagtaaatgatagaaattttactatt 32018954  T
Q  314 -aaaatcaacacaattaatcatttccttaa 342  Q
     |||||||||||||||||||||||| ||||    
T  32018953 caaaatcaacacaattaatcatttcattaa 32018924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 163 - 374
Target Start/End: Original strand, 44424086 - 44424287
Alignment:
Q  163 ctcaaaataattgtcactttacaataccaatgcaatatttattannnnnnnccactattatactcttatttattgaatttcatcaaacttaactactcca 262  Q
    |||||||||||| |||||||| |||| |||||||  ||||||||       | | ||| |||| ||||||||||||| |||||| ||||||| |||||||    
T  44424086 ctcaaaataattatcactttaaaatatcaatgcagcatttattatttttttc-attataatacccttatttattgaacttcatccaacttaattactcca 44424184  T
Q  263 ctaactacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaacacaattaatcatttccttaataattgtgcacaaatcttaa 362  Q
    ||||||||| ||||||| || ||      ||||| ||   |||||||||| ||||||||||||||||||||||||||||||||  |||||  || |||||    
T  44424185 ctaactacatttaataagggtgt------aaatgata---attttaccatcaaaatcaacacaattaatcatttccttaataaccgtgcatcaaccttaa 44424275  T
Q  363 acgactaatatt 374  Q
    ||||||| ||||    
T  44424276 acgactattatt 44424287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 262 - 371
Target Start/End: Original strand, 12631345 - 12631454
Alignment:
Q  262 actaactacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaacacaattaatcatttccttaataattgtgcacaaatctta 361  Q
    |||||||||||||||||| |  |||||  |||||  |||||||||||| ||| ||||||| ||||||||| |||||||||||||| ||||||||| ||||    
T  12631345 actaactacaattaataaggatgttttgataaatactactaattttactattgaaatcaatacaattaattatttccttaataatcgtgcacaaacctta 12631444  T
Q  362 aacgactaat 371  Q
    || |||||||    
T  12631445 aatgactaat 12631454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 228 - 369
Target Start/End: Complemental strand, 17828473 - 17828334
Alignment:
Q  228 ttatttattgaatttcatcaaacttaactactccactaactacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaacacaat 327  Q
    |||||||||||||| |||| ||||||| ||||||||||||||||||| ||||  |   ||| ||||||| || ||||||||||||| ||||||||| ||     
T  17828473 ttatttattgaatt-catccaacttaattactccactaactacaattgataagagtaattttgtaaatgatattaattttaccattgaaatcaacaaaaa 17828375  T
Q  328 taatcatttccttaataattgtgcacaaatcttaaacgacta 369  Q
    ||||| |||||||||| || |||||||||  |||||||||||    
T  17828374 taatcgtttccttaat-atcgtgcacaaactttaaacgacta 17828334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 285 - 374
Target Start/End: Original strand, 44180268 - 44180357
Alignment:
Q  285 ttttagtaaatgttactaattttaccattaaaatcaacacaattaatcatttccttaataattgtgcacaaatcttaaacgactaatatt 374  Q
    |||||||||||  |||||||||||||||| |||||||||||||||||||||| ||||||||| ||| | ||| |||||||||||| ||||    
T  44180268 ttttagtaaattatactaattttaccattgaaatcaacacaattaatcattttcttaataatcgtgtataaaccttaaacgactattatt 44180357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 214 - 374
Target Start/End: Complemental strand, 32018849 - 32018689
Alignment:
Q  214 ccactattatactcttatttattgaatttcatcaaacttaactactccactaactacaattaataatggagttttagtaaatgttactaattttaccatt 313  Q
    |||||||||  | |||||||||| ||||| ||| ||||||| ||||| |||||| |||||||||||  |  |||||||||||| ||  |||||||| |||    
T  32018849 ccactattaagcccttatttattaaatttaatccaacttaattactctactaacgacaattaataagagtattttagtaaatgatagaaattttactatt 32018750  T
Q  314 aaaatcaacacaattaatcatttccttaataattgtgcacaaatcttaaacgactaatatt 374  Q
     ||||||||||||||| ||||||| |||| ||| || || |||| ||||| ||||| ||||    
T  32018749 gaaatcaacacaattattcatttcattaaaaatcgtacaaaaattttaaatgactattatt 32018689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 163 - 276
Target Start/End: Complemental strand, 47045653 - 47045546
Alignment:
Q  163 ctcaaaataattgtcactttacaataccaatgcaatatttattannnnnnnccactattatactcttatttattgaatttcatcaaacttaactactcca 262  Q
    ||||||||||||||||||||| |||||||||||||  ||| ||        |||||||||||||||||||| |||||||||||| |||||||||||| ||    
T  47045653 ctcaaaataattgtcactttagaataccaatgcaacttttttt------ttccactattatactcttatttgttgaatttcatccaacttaactactaca 47045560  T
Q  263 ctaactacaattaa 276  Q
    ||||| ||||||||    
T  47045559 ctaaccacaattaa 47045546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 163 - 291
Target Start/End: Original strand, 36790679 - 36790809
Alignment:
Q  163 ctcaaaataattgtcactttacaataccaatgcaatatttattannnnnnn--ccactattatactcttatttattgaatttcatcaaacttaactactc 260  Q
    ||||||||||||||||||||| |||| |||||||  ||||||||         ||| |||||||| ||||||||||||||||||||  || |||||||||    
T  36790679 ctcaaaataattgtcactttagaatagcaatgcagcatttattattattttttccattattatacccttatttattgaatttcatccgacataactactc 36790778  T
Q  261 cactaactacaattaataatggagttttagt 291  Q
     |||||||||||||||||| || ||||||||    
T  36790779 aactaactacaattaataagggtgttttagt 36790809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 227 - 308
Target Start/End: Original strand, 42796010 - 42796094
Alignment:
Q  227 cttatttattgaatttcatcaaacttaac---tactccactaactacaattaataatggagttttagtaaatgttactaatttta 308  Q
    |||||||| ||||||||||| ||||||||   |||||||||||||||||||||||| || |||||| ||||||||||||||||||    
T  42796010 cttatttaatgaatttcatccaacttaacaactactccactaactacaattaataagggtgttttaataaatgttactaatttta 42796094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 261 - 369
Target Start/End: Complemental strand, 2850971 - 2850863
Alignment:
Q  261 cactaactacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaacacaattaatcatttccttaataattgtgcacaaatctt 360  Q
    ||||||||| ||||||| | ||  |||||||||||  || |||||||| |||| ||||||||| ||||||||||||||||||||||  |||||||| | |    
T  2850971 cactaactataattaatgagggtattttagtaaataatattaattttatcattgaaatcaacataattaatcatttccttaataatcatgcacaaaccat 2850872  T
Q  361 aaacgacta 369  Q
    |||||||||    
T  2850871 aaacgacta 2850863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 168 - 342
Target Start/End: Complemental strand, 21937970 - 21937796
Alignment:
Q  168 aataattgtcactttacaataccaatgcaatatttattannnnnnnccactattatactcttatttattgaatttcatcaaacttaactactccactaac 267  Q
    ||||||||||| |||| ||| ||||||||  ||||||||       |||||| || || ||| |||||| |||| || |  | |||||||||||||||||    
T  21937970 aataattgtcaatttagaatgccaatgcagcatttattattttcccccactaatacacccttgtttattaaattccacctcaattaactactccactaac 21937871  T
Q  268 tacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaacacaattaatcatttccttaa 342  Q
    ||||||||||||  | | |||||||||||  |||||||||| ||||||||| ||   || |||||||||||||||    
T  21937870 tacaattaataagagtgctttagtaaatgacactaattttatcattaaaataaagttaactaatcatttccttaa 21937796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 166 - 311
Target Start/End: Original strand, 24166934 - 24167080
Alignment:
Q  166 aaaataattgtcactttacaataccaatgcaatatttattannnnnnnc-cactattatactcttatttattgaatttcatcaaacttaactactccact 264  Q
    |||||||||||||||||||||||||||||||||||||||||         |||| |||| | ||||||| |||||||||||  ||  |||||||| ||||    
T  24166934 aaaataattgtcactttacaataccaatgcaatatttattatttttatttcacttttattcccttatttcttgaatttcattcaatgtaactactgcact 24167033  T
Q  265 aactacaattaataatggagttttagtaaatgttactaattttacca 311  Q
    |||||| |||||||| ||  |||||||||||   | |||||||||||    
T  24167034 aactactattaataagggtattttagtaaataacattaattttacca 24167080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 230 - 330
Target Start/End: Original strand, 35333051 - 35333151
Alignment:
Q  230 atttattgaatttcatcaaacttaactactccactaactacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaacacaatta 329  Q
    |||| |||||||||||| |||||||||||||||||||||||||||||||||    ||||| |||||  || ||||| ||  ||| |||||||||||||||    
T  35333051 atttgttgaatttcatctaacttaactactccactaactacaattaataataatattttaataaataatattaattatataattgaaatcaacacaatta 35333150  T
Q  330 a 330  Q
    |    
T  35333151 a 35333151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 221 - 293
Target Start/End: Complemental strand, 30546485 - 30546413
Alignment:
Q  221 tatactcttatttattgaatttcatcaaacttaactactccactaactacaattaataatggagttttagtaa 293  Q
    ||||| ||||||||||||||||||    |||||||||||||| |||||||||||||||| || ||||||||||    
T  30546485 tatacccttatttattgaatttcactccacttaactactccaataactacaattaataaaggtgttttagtaa 30546413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 226 - 336
Target Start/End: Complemental strand, 31665842 - 31665731
Alignment:
Q  226 tcttatttattgaatttcatcaaacttaactactccactaactacaattaataatggagttttagtaaatg-ttactaattttaccattaaaatcaacac 324  Q
    |||||||||||||| || ||| || |||||||||| ||||||||| ||||||||     ||||||||||||   | ||||||||||||||||||||||||    
T  31665842 tcttatttattgaaatttatctaatttaactactctactaactactattaataaatatattttagtaaatgaaaattaattttaccattaaaatcaacac 31665743  T
Q  325 aattaatcattt 336  Q
    || |||| ||||    
T  31665742 aactaattattt 31665731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 234 - 337
Target Start/End: Original strand, 39005433 - 39005536
Alignment:
Q  234 attgaatttcatcaaacttaactactccactaactacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaacacaattaatca 333  Q
    |||||||||||   ||||||| || || |||||||||||||| ||| ||  |||||||||||| ||||||||||||||||  ||||||| ||| |||| |    
T  39005433 attgaatttcacttaacttaattaatctactaactacaattattaaaggtattttagtaaatgatactaattttaccattttaatcaactcaactaataa 39005532  T
Q  334 tttc 337  Q
    ||||    
T  39005533 tttc 39005536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 215 - 277
Target Start/End: Complemental strand, 4958736 - 4958674
Alignment:
Q  215 cactattatactcttatttattgaatttcatcaaacttaactactccactaactacaattaat 277  Q
    ||||||||||| | |||| |||||| ||||||||||||||||||| ||||||||| |||||||    
T  4958736 cactattatacccctattgattgaacttcatcaaacttaactacttcactaactataattaat 4958674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 215 - 336
Target Start/End: Complemental strand, 37850863 - 37850744
Alignment:
Q  215 cactattatactcttatttattgaatttcatcaaacttaactactccactaactacaattaataatgga--gttttagtaaatgttactaattttaccat 312  Q
    |||||||||| ||||||||||||| ||||||| |||||||| |||||| |||||||| || |||| |||   |||||||||||  ||||||||||   ||    
T  37850863 cactattatattcttatttattgattttcatctaacttaacaactccattaactacagtttataa-ggatctttttagtaaatcatactaatttt---at 37850768  T
Q  313 taaaatcaacacaattaatcattt 336  Q
    ||||||||| || |||||| ||||    
T  37850767 taaaatcaataccattaattattt 37850744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 268 - 374
Target Start/End: Original strand, 39452390 - 39452495
Alignment:
Q  268 tacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaacacaattaatcatttccttaataattgtgcacaaatcttaaacgac 367  Q
    |||||||||||| ||  |||||||||||| || |||||||||||||||||||||||  |||||| ||||  ||||  ||||||  |||| ||||||||||    
T  39452390 tacaattaataagggtattttagtaaatgatattaattttaccattaaaatcaaca-tattaattatttttttaaagattgtgtccaaaccttaaacgac 39452488  T
Q  368 taatatt 374  Q
    || ||||    
T  39452489 tattatt 39452495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 252 - 341
Target Start/End: Original strand, 29121533 - 29121622
Alignment:
Q  252 taactactccactaactacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaacacaattaatcatttcctta 341  Q
    |||||||||||||||| | ||||||| | || ||||||||||||   ||  |||||||||||||||||||||  ||| ||||||||||||    
T  29121533 taactactccactaacaataattaatgagggtgttttagtaaattagacatattttaccattaaaatcaacaatattgatcatttcctta 29121622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 218 - 374
Target Start/End: Complemental strand, 19060529 - 19060378
Alignment:
Q  218 tattatactcttatttattgaatttcatcaaacttaactactccactaactacaattaataatggagttttagtaaatgttactaattttaccattaaaa 317  Q
    |||||||  ||||||| |||||||||||| || || || | | |||||||||||||||||||      | || |||||  || ||||||||| ||| |||    
T  19060529 tattatatccttatttgttgaatttcatccaagttgacaaattcactaactacaattaataag-----tataataaataatattaattttacaatttaaa 19060435  T
Q  318 tcaacacaattaatcatttccttaataattgtgcacaaatcttaaacgactaatatt 374  Q
    |||||||||||||||||||| || | |||| | ||||||  ||||||||||| ||||    
T  19060434 tcaacacaattaatcatttctttcaaaattatacacaaactttaaacgactattatt 19060378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 13 - 77
Target Start/End: Complemental strand, 29780416 - 29780352
Alignment:
Q  13 aaggcaaactaaaggccgcaattaagacgactaggggcgggccacaataaaagtggaagttccaa 77  Q
    ||||||||||||| ||||||||| || ||||||||||||| || ||||||| |||||| ||||||    
T  29780416 aaggcaaactaaaagccgcaatttaggcgactaggggcggaccgcaataaaggtggaatttccaa 29780352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 266 - 338
Target Start/End: Complemental strand, 47045538 - 47045467
Alignment:
Q  266 actacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaacacaattaatcatttcc 338  Q
    |||||||||||||| ||  |||||| ||||| ||||||||||| |||| |||||||| |||||||||||||||    
T  47045538 actacaattaataagggtattttaggaaatgatactaatttta-cattgaaatcaactcaattaatcatttcc 47045467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 219 - 254
Target Start/End: Complemental strand, 29198812 - 29198777
Alignment:
Q  219 attatactcttatttattgaatttcatcaaacttaa 254  Q
    ||||||||||||||||||||||||||||||||||||    
T  29198812 attatactcttatttattgaatttcatcaaacttaa 29198777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 254 - 344
Target Start/End: Original strand, 14063348 - 14063438
Alignment:
Q  254 actactccactaactacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaacacaattaatcatttccttaata 344  Q
    |||||||||||||||| || |||| | || | ||||||||||   ||  |||||||||||||||||||||  | |||||||||||||||||    
T  14063348 actactccactaactataactaatgagggtggtttagtaaattaaacatattttaccattaaaatcaacattactaatcatttccttaata 14063438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 254 - 344
Target Start/End: Original strand, 14373376 - 14373466
Alignment:
Q  254 actactccactaactacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaacacaattaatcatttccttaata 344  Q
    |||||||||||||||| || |||| | || | ||||||||||   ||  |||||||||||||||||||||  | |||||||||||||||||    
T  14373376 actactccactaactataactaatgagggtggtttagtaaattaaacatattttaccattaaaatcaacattactaatcatttccttaata 14373466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 166 - 269
Target Start/End: Original strand, 37490319 - 37490422
Alignment:
Q  166 aaaataattgtcactttacaataccaatgcaatatttattannnnnnnccactattatactcttatttattgaatttcatcaaacttaactactccacta 265  Q
    |||| ||| ||||||||| ||||||||||||| ||||||||         |||| ||| |||||||||||||||||||||  || |||| ||||||||||    
T  37490319 aaaacaatagtcactttaaaataccaatgcaacatttattattattttttactagtatgctcttatttattgaatttcattcaatttaattactccacta 37490418  T
Q  266 acta 269  Q
    ||||    
T  37490419 acta 37490422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 252 - 345
Target Start/End: Original strand, 7930083 - 7930176
Alignment:
Q  252 taactactccactaactacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaacacaattaatcatttccttaataa 345  Q
    |||||| | ||||||||| ||||||||| || |||||||||||||   |  ||||| ||||| |||||||||| | ||||||||| ||||||||    
T  7930083 taactatttcactaactataattaataagggtgttttagtaaatgaaccatatttttccattgaaatcaacactactaatcattttcttaataa 7930176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 284 - 345
Target Start/End: Complemental strand, 27557036 - 27556975
Alignment:
Q  284 gttttagtaaatgttactaattttaccattaaaatcaacacaattaatcatttccttaataa 345  Q
    ||||||||||||| |||  ||||| |||||||||||||||  | ||||||||||||||||||    
T  27557036 gttttagtaaatgatacacattttgccattaaaatcaacatcagtaatcatttccttaataa 27556975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 286 - 334
Target Start/End: Original strand, 15464742 - 15464790
Alignment:
Q  286 tttagtaaatgttactaattttaccattaaaatcaacacaattaatcat 334  Q
    ||||||||||| |||  |||||||||||||||||||||| |||||||||    
T  15464742 tttagtaaatgatacacattttaccattaaaatcaacactattaatcat 15464790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 288 - 331
Target Start/End: Complemental strand, 17609393 - 17609350
Alignment:
Q  288 tagtaaatgttactaattttaccattaaaatcaacacaattaat 331  Q
    ||||||||  ||||||||||||||||||||||||| ||||||||    
T  17609393 tagtaaattatactaattttaccattaaaatcaactcaattaat 17609350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 288 - 331
Target Start/End: Complemental strand, 17609636 - 17609593
Alignment:
Q  288 tagtaaatgttactaattttaccattaaaatcaacacaattaat 331  Q
    ||||||||  ||||||||||||||||||||||||| ||||||||    
T  17609636 tagtaaattatactaattttaccattaaaatcaactcaattaat 17609593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 288 - 331
Target Start/End: Complemental strand, 17609879 - 17609836
Alignment:
Q  288 tagtaaatgttactaattttaccattaaaatcaacacaattaat 331  Q
    ||||||||  ||||||||||||||||||||||||| ||||||||    
T  17609879 tagtaaattatactaattttaccattaaaatcaactcaattaat 17609836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #78
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 288 - 331
Target Start/End: Complemental strand, 17610122 - 17610079
Alignment:
Q  288 tagtaaatgttactaattttaccattaaaatcaacacaattaat 331  Q
    ||||||||  ||||||||||||||||||||||||| ||||||||    
T  17610122 tagtaaattatactaattttaccattaaaatcaactcaattaat 17610079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #79
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 288 - 331
Target Start/End: Complemental strand, 17610365 - 17610322
Alignment:
Q  288 tagtaaatgttactaattttaccattaaaatcaacacaattaat 331  Q
    ||||||||  ||||||||||||||||||||||||| ||||||||    
T  17610365 tagtaaattatactaattttaccattaaaatcaactcaattaat 17610322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #80
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 16 - 79
Target Start/End: Complemental strand, 28909986 - 28909923
Alignment:
Q  16 gcaaactaaaggccgcaattaagacgactaggggcgggccacaataaaagtggaagttccaaca 79  Q
    |||||| ||||| ||||||| || ||||||||||||| |||||||||| | |||| ||||||||    
T  28909986 gcaaaccaaagggcgcaatttaggcgactaggggcggaccacaataaaggcggaatttccaaca 28909923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #81
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 329 - 375
Target Start/End: Original strand, 34635958 - 34636004
Alignment:
Q  329 aatcatttccttaataattgtgcacaaatcttaaacgactaatattg 375  Q
    |||||||||||||||||| ||||||||| |||||| | |||||||||    
T  34635958 aatcatttccttaataatcgtgcacaaaccttaaatggctaatattg 34636004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #82
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 233 - 278
Target Start/End: Original strand, 17610913 - 17610958
Alignment:
Q  233 tattgaatttcatcaaacttaactactccactaactacaattaata 278  Q
    |||||||||||||| |||||||||| | || |||||||||||||||    
T  17610913 tattgaatttcatccaacttaactatttcaataactacaattaata 17610958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #83
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 271 - 336
Target Start/End: Complemental strand, 25531070 - 25531005
Alignment:
Q  271 aattaataatggagttttagtaaatgttactaattttaccattaaaatcaacacaattaatcattt 336  Q
    |||||||||  | ||||||||||||| | |  ||||| |||||||||||||||| |||||||||||    
T  25531070 aattaataagagtgttttagtaaatgatgcacattttgccattaaaatcaacactattaatcattt 25531005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #84
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 216 - 269
Target Start/End: Original strand, 37490457 - 37490510
Alignment:
Q  216 actattatactcttatttattgaatttcatcaaacttaactactccactaacta 269  Q
    |||| ||| |||||||||||||||||||||  || |||| ||||||||||||||    
T  37490457 actagtatgctcttatttattgaatttcattcaatttaattactccactaacta 37490510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #85
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 252 - 336
Target Start/End: Original strand, 762187 - 762271
Alignment:
Q  252 taactactccactaactacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaacacaattaatcattt 336  Q
    |||||||||||  |||||  ||||||||  | |||||||||||||| ||  |||||| ||||||||| ||||| | |||||||||    
T  762187 taactactccatgaactatgattaataagtgtgttttagtaaatgtaacacattttatcattaaaattaacactactaatcattt 762271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #86
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 219 - 295
Target Start/End: Original strand, 46602047 - 46602123
Alignment:
Q  219 attatactcttatttattgaatttcatcaaacttaactactccactaactacaattaataatggagttttagtaaat 295  Q
    ||||||| |||||||||| |||| ||    ||| ||||||| ||||||||||||| ||||| || ||||||||||||    
T  46602047 attatacccttatttattcaattccactgcactaaactactgcactaactacaatgaataagggtgttttagtaaat 46602123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 137; Significance: 2e-71; HSPs: 96)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 163 - 376
Target Start/End: Original strand, 12039016 - 12039229
Alignment:
Q  163 ctcaaaataattgtcactttacaataccaatgcaatatttattannnnnnnccactattatactcttatttattgaatttcatcaaacttaactactcca 262  Q
    ||||||||||||||||||||||||||| ||||||| ||||||||       |||||||||||| ||||||||||||||| |||| ||||||| |||||||    
T  12039016 ctcaaaataattgtcactttacaatactaatgcaacatttattattattttccactattatacccttatttattgaattacatccaacttaaatactcca 12039115  T
Q  263 ctaactacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaacacaattaatcatttccttaataattgtgcacaaatcttaa 362  Q
     ||||||||||||||||  | || ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||| |||||    
T  12039116 ttaactacaattaataagagtgtattagtaaatgttactaattttaccattgaaatcaacacaattaatcatttccttaataatcgtgcacaaaccttaa 12039215  T
Q  363 acgactaatattgt 376  Q
    ||||||||||||||    
T  12039216 acgactaatattgt 12039229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 163 - 369
Target Start/End: Original strand, 39864045 - 39864251
Alignment:
Q  163 ctcaaaataattgtcactttacaataccaatgcaatatttattannnnnnnccactattatactcttatttattgaatttcatcaaacttaactactcca 262  Q
    |||||||||||||||||||||||||| |||||||| ||||||||       |||||||||||| |||||||||||||||||||| |||||||||||||||    
T  39864045 ctcaaaataattgtcactttacaatatcaatgcaacatttattatttttttccactattatacccttatttattgaatttcatccaacttaactactcca 39864144  T
Q  263 ctaactacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaacacaattaatcatttccttaataattgtgcacaaatcttaa 362  Q
    |||||||||||||||||  |  |||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||  ||||    
T  39864145 ctaactacaattaataagagtattttagtaaatgctactaattttaccattgaaatcaacacaattaatcatttccttaataatcgtgcacaaactttaa 39864244  T
Q  363 acgacta 369  Q
    |||||||    
T  39864245 acgacta 39864251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 115 - 391
Target Start/End: Complemental strand, 24991886 - 24991609
Alignment:
Q  115 tactccattcgtctcacaattattgtttctttagcannnnnnnnnnnnctcaaaataattgtcactttacaataccaatgcaatatttattannnnnnnc 214  Q
    |||||||| ||||||||||||||||| |||||||||            ||||||||||||||||||||||||||| ||||||| ||||||||       |    
T  24991886 tactccatccgtctcacaattattgtctctttagcattttttttccttctcaaaataattgtcactttacaatactaatgcaacatttattatttttttc 24991787  T
Q  215 c-actattatactcttatttattgaatttcatcaaacttaactactccactaactacaattaataatggagttttagtaaatgttactaattttaccatt 313  Q
    | ||||||||||  ||||||||||||||||||| |||||||||| ||||||||||||||||||||| || ||| ||||||||  || |||||||||| ||    
T  24991786 ccactattatacctttatttattgaatttcatccaacttaactattccactaactacaattaataaaggtgttgtagtaaatactattaattttaccgtt 24991687  T
Q  314 aaaatcaacacaattaatcatttccttaataattgtgcacaaatcttaaacgactaatattgtttgacggaggtagta 391  Q
     |||||||||||||||||||||||||||||||| ||| ||||| |||||||||||||||||||  |||||||| ||||    
T  24991686 gaaatcaacacaattaatcatttccttaataatcgtgtacaaaccttaaacgactaatattgtgagacggagggagta 24991609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 116; E-Value: 7e-59
Query Start/End: Original strand, 163 - 376
Target Start/End: Complemental strand, 23169175 - 23168964
Alignment:
Q  163 ctcaaaataattgtcactttacaataccaatgcaatatttattannnnnnnccactattatactcttatttattgaatttcatcaaacttaactactcca 262  Q
    ||||||||||||||||||||||||||||||||||| ||||||||       ||||||||||||||||||||||||||||||| |  ||||||||| |  |    
T  23169175 ctcaaaataattgtcactttacaataccaatgcaacatttattactttt--ccactattatactcttatttattgaatttcacctcacttaactatttaa 23169078  T
Q  263 ctaactacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaacacaattaatcatttccttaataattgtgcacaaatcttaa 362  Q
    ||||||| ||||||||| |  ||||||||||||| |||||||||||||||| ||||||||||||||||| |||| ||||||||| |||||||||  ||||    
T  23169077 ctaactataattaataaggatgttttagtaaatgctactaattttaccattgaaatcaacacaattaattattttcttaataatcgtgcacaaactttaa 23168978  T
Q  363 acgactaatattgt 376  Q
    ||||||||||||||    
T  23168977 acgactaatattgt 23168964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 164 - 391
Target Start/End: Original strand, 28748926 - 28749153
Alignment:
Q  164 tcaaaataattgtcactttacaataccaatgcaatatttattannnnnnnccactattatactcttatttattgaatttcatcaaacttaactactccac 263  Q
    ||||||||||| |||||||| |||| |||||||  ||||||||       |||||||||||| |||||||||  ||||||||| |||||||| | || ||    
T  28748926 tcaaaataattatcactttataatagcaatgcagcatttattattttttcccactattatacccttatttataaaatttcatccaacttaacaattctac 28749025  T
Q  264 taactacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaacacaattaatcatttccttaataattgtgcacaaatcttaaa 363  Q
    ||| |||||||||||| || ||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||    
T  28749026 taattacaattaataagggtgttttagtaaatgctactaattttaccattgaaatcaacacaattaatcatttccttaataatcgtgcacaaatcttaaa 28749125  T
Q  364 cgactaatattgtttgacggaggtagta 391  Q
     ||| |||||| |  |||||||| ||||    
T  28749126 tgacaaatattatgagacggagggagta 28749153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 163 - 374
Target Start/End: Complemental strand, 49224170 - 49223959
Alignment:
Q  163 ctcaaaataattgtcactttacaataccaatgcaatatttattannnnnnnccactattatactcttatttattgaatttcatcaaacttaactactcca 262  Q
    ||||||||||||||||||||| ||||| ||||||| ||||||||        || ||| |||| ||||||||||||| |||||| |||||||||||||||    
T  49224170 ctcaaaataattgtcactttagaatactaatgcaacatttattattttttttcattataatacccttatttattgaacttcatccaacttaactactcca 49224071  T
Q  263 ctaactacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaacacaattaatcatttccttaataattgtgcacaaatcttaa 362  Q
    ||||||||||||||||| || ||||||||||||| ||||||||||||||| ||||||||||||||||||||||| |||| |||  |||||  ||||||||    
T  49224070 ctaactacaattaataagggtgttttagtaaatgatactaattttaccatcaaaatcaacacaattaatcattttcttagtaaccgtgcatcaatcttaa 49223971  T
Q  363 acgactaatatt 374  Q
    ||||||| ||||    
T  49223970 acgactattatt 49223959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 164 - 374
Target Start/End: Complemental strand, 40145030 - 40144820
Alignment:
Q  164 tcaaaataattgtcactttacaataccaatgcaatatttattannnnnnnccactattatactcttatttattgaatttcatcaaacttaactactccac 263  Q
    |||||||||||||||||||| |||| |||||||| ||||||||       ||| ||| |||| ||||||||||||| |||||| |||||||||||||||     
T  40145030 tcaaaataattgtcactttagaatatcaatgcaacatttattattttttcccattataatacccttatttattgaacttcatccaacttaactactccat 40144931  T
Q  264 taactacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaacacaattaatcatttccttaataattgtgcacaaatcttaaa 363  Q
    |||||||||||||||| || ||||||||||||| || |||||||||||| ||||||||||||||||||||||| |||||||| ||||||  |||||| ||    
T  40144930 taactacaattaataagggtgttttagtaaatgatattaattttaccatcaaaatcaacacaattaatcattttcttaataactgtgcatcaatcttgaa 40144831  T
Q  364 cgactaatatt 374  Q
    |||||| ||||    
T  40144830 cgactattatt 40144820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 214 - 376
Target Start/End: Original strand, 9307612 - 9307774
Alignment:
Q  214 ccactattatactcttatttattgaatttcatcaaacttaactactccactaactacaattaataatggagttttagtaaatgttactaattttaccatt 313  Q
    ||||||||||||  ||||||||||||||||||| ||||||||||||||||||||||||||||| || || ||||||||||||| || |||||||| ||||    
T  9307612 ccactattatacctttatttattgaatttcatccaacttaactactccactaactacaattaacaagggtgttttagtaaatgctattaattttatcatt 9307711  T
Q  314 aaaatcaacacaattaatcatttccttaataattgtgcacaaatcttaaacgactaatattgt 376  Q
     ||||||||||| |||||||||||||||||||| ||| ||||| |||||||||||||||||||    
T  9307712 gaaatcaacacagttaatcatttccttaataatcgtgtacaaaccttaaacgactaatattgt 9307774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 163 - 345
Target Start/End: Complemental strand, 20210024 - 20209842
Alignment:
Q  163 ctcaaaataattgtcactttacaataccaatgcaatatttattannnnnnnccactattatactcttatttattgaatttcatcaaacttaactactcca 262  Q
    ||||||||||||||||||||| ||||||||||||  ||||||||       ||| ||| |||| ||||||||||||| |||||| |||||||||||||||    
T  20210024 ctcaaaataattgtcactttagaataccaatgcagcatttattattttttcccattataatacccttatttattgaacttcatccaacttaactactcca 20209925  T
Q  263 ctaactacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaacacaattaatcatttccttaataa 345  Q
    ||||||||||||||||| |  ||||||||||||| |||||||||||| || |||||||||| |||||||||||| ||||||||    
T  20209924 ctaactacaattaataaggatgttttagtaaatgatactaattttactatcaaaatcaacataattaatcattttcttaataa 20209842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 163 - 367
Target Start/End: Original strand, 26093328 - 26093532
Alignment:
Q  163 ctcaaaataattgtcactttacaataccaatgcaatatttattannnnnnnccactattatactcttatttattgaatttcatcaaacttaactactcca 262  Q
    ||||||| |||||||||||||  |||| |||| || ||||||||       ||| |||||||| ||||||||||||| |||||| ||||||| |||| ||    
T  26093328 ctcaaaacaattgtcactttagtatactaatgtaacatttattatatttttccattattatacccttatttattgaacttcatctaacttaattacttca 26093427  T
Q  263 ctaactacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaacacaattaatcatttccttaataattgtgcacaaatcttaa 362  Q
    ||||||||||||||||| |   ||||| |||||| || ||||||||||||| |||||||||||||||||||||| ||||||||| |||||||||||||||    
T  26093428 ctaactacaattaataaggatattttaataaatgatattaattttaccattgaaatcaacacaattaatcattttcttaataatcgtgcacaaatcttaa 26093527  T
Q  363 acgac 367  Q
    |||||    
T  26093528 acgac 26093532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 163 - 391
Target Start/End: Original strand, 31042731 - 31042959
Alignment:
Q  163 ctcaaaataattgtcactttacaataccaatgcaatatttattannnnnnnccactattatactcttatttattgaatttcatcaaacttaactactcca 262  Q
    ||||||||||||||||||||| |||| |||| ||  ||||||||       ||||||| |||   ||||||||||||||||||  ||||||| |||| ||    
T  31042731 ctcaaaataattgtcactttagaatatcaatacatcatttattatttttttccactatgatatctttatttattgaatttcattcaacttaattacttca 31042830  T
Q  263 ctaactacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaacacaattaatcatttccttaataattgtgcacaaatcttaa 362  Q
    ||| ||||||||||||| ||  ||  |||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||  |||||||| |||||    
T  31042831 ctacctacaattaataagggtattacagtaaatgatactaattttaccattgaaatcaacacaattaatcatttccttaataatcatgcacaaaccttaa 31042930  T
Q  363 acgactaatattgtttgacggaggtagta 391  Q
    | ||||||||||||  |||||||| ||||    
T  31042931 atgactaatattgtgagacggagggagta 31042959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 163 - 366
Target Start/End: Original strand, 37506058 - 37506264
Alignment:
Q  163 ctcaaaataattgtcactttacaataccaatgcaatatttattannnnnnnccactattatactcttatttattgaatttcatcaaacttaactactcca 262  Q
    ||||||||||||||||||||| |||| |||||||| ||||||||       ||| ||| |||| |||||||||||||||||||  |||||||||||||||    
T  37506058 ctcaaaataattgtcactttagaatatcaatgcaacatttattatttttttccattataatacccttatttattgaatttcattcaacttaactactcca 37506157  T
Q  263 ctaactacaattaataatggagttttagtaaatg---ttactaattttaccattaaaatcaacacaattaatcatttccttaataattgtgcacaaatct 359  Q
    |||||||||||||||||  | |||||||||||||    ||||||||||| ||| ||||||||||||||||||||||||||||||||  |||||  || ||    
T  37506158 ctaactacaattaataaaagtgttttagtaaatgatagtactaattttatcatcaaaatcaacacaattaatcatttccttaataaccgtgcatcaacct 37506257  T
Q  360 taaacga 366  Q
    |||||||    
T  37506258 taaacga 37506264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 214 - 375
Target Start/End: Complemental strand, 6023782 - 6023621
Alignment:
Q  214 ccactattatactcttatttattgaatttcatcaaacttaactactccactaactacaattaataatggagttttagtaaatgttactaattttaccatt 313  Q
    ||||||||||||||| || |||||||||||||| ||||||||||||||| |||||||||||||||| ||  |||||||||| | |||||| |||||||||    
T  6023782 ccactattatactctcatgtattgaatttcatccaacttaactactccaataactacaattaataaaggtattttagtaaaagctactaaatttaccatt 6023683  T
Q  314 aaaatcaacacaattaatcatttccttaataattgtgcacaaatcttaaacgactaatattg 375  Q
     |||||||||||||||| ||||||| ||||||| | |||||||  |||||||||||||||||    
T  6023682 gaaatcaacacaattaaacatttccgtaataatcgcgcacaaacattaaacgactaatattg 6023621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 163 - 369
Target Start/End: Complemental strand, 16395229 - 16395025
Alignment:
Q  163 ctcaaaataattgtcactttacaataccaatgcaatatttattannnnnnnccactattatactcttatttattgaatttcatcaaacttaactactcca 262  Q
    ||||||||||||||||||||| |||||||||| |  ||||||||       | | |||||||   ||||||||||||||||||| |||||||||||||||    
T  16395229 ctcaaaataattgtcactttagaataccaatgtaggatttattatttttttc-attattatatcattatttattgaatttcatctaacttaactactcca 16395131  T
Q  263 ctaactacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaacacaattaatcatttccttaataattgtgcacaaatcttaa 362  Q
    |||||||||||||| || | | |||||||||||| |||||||||||| || ||||||||||||||||||||||| ||||||||| ||||| ||| |||||    
T  16395130 ctaactacaattaaaaaggta-ttttagtaaatgatactaattttactatcaaaatcaacacaattaatcattttcttaataatcgtgcataaaccttaa 16395032  T
Q  363 acgacta 369  Q
    |||||||    
T  16395031 acgacta 16395025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 163 - 369
Target Start/End: Complemental strand, 33733446 - 33733241
Alignment:
Q  163 ctcaaaataattgtcactttacaataccaatgcaatatttattannnnnnnccactattatactcttatttattgaatttcatcaaacttaactactcca 262  Q
    ||||||||||||||||||||| |||||||||| |  ||||||||       ||| |||||||| |||||||||||||||||||   || |||| |||| |    
T  33733446 ctcaaaataattgtcactttagaataccaatgaagcatttattattcttttccattattatacccttatttattgaatttcattctacctaaccactcta 33733347  T
Q  263 ctaactacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaacacaattaatcatttccttaataattgtgcacaaatcttaa 362  Q
    |||||||||||||||||  |  ||||||||||||||| ||||||||||||| |||||||||||| ||||||||||||||||||| |||||||||  ||||    
T  33733346 ctaactacaattaataaaagtattttagtaaatgttaataattttaccattgaaatcaacacaa-taatcatttccttaataatcgtgcacaaactttaa 33733248  T
Q  363 acgacta 369  Q
    |||||||    
T  33733247 acgacta 33733241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 218 - 342
Target Start/End: Original strand, 36701910 - 36702034
Alignment:
Q  218 tattatactcttatttattgaatttcatcaaacttaactactccactaactacaattaataatggagttttagtaaatgttactaattttaccattaaaa 317  Q
    |||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||| ||  |||||||||||| |||||||||||||||| |||    
T  36701910 tattatactcttatttattgaatttcatcaaacttaacgattccactaactacaattaataagggcattttagtaaatgatactaattttaccattgaaa 36702009  T
Q  318 tcaacacaattaatcatttccttaa 342  Q
    |||||| ||||||||||||||||||    
T  36702010 tcaacataattaatcatttccttaa 36702034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 218 - 342
Target Start/End: Original strand, 36718014 - 36718138
Alignment:
Q  218 tattatactcttatttattgaatttcatcaaacttaactactccactaactacaattaataatggagttttagtaaatgttactaattttaccattaaaa 317  Q
    |||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||| ||  |||||||||||| |||||||||||||||| |||    
T  36718014 tattatactcttatttattgaatttcatcaaacttaacgattccactaactacaattaataagggcattttagtaaatgatactaattttaccattgaaa 36718113  T
Q  318 tcaacacaattaatcatttccttaa 342  Q
    |||||| ||||||||||||||||||    
T  36718114 tcaacataattaatcatttccttaa 36718138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 218 - 352
Target Start/End: Original strand, 37276450 - 37276584
Alignment:
Q  218 tattatactcttatttattgaatttcatcaaacttaactactccactaactacaattaataatggagttttagtaaatgttactaattttaccattaaaa 317  Q
    |||||||| |||||||||||||||||||| || ||||||| ||||||||||||||||||||| || ||||||||||| | ||||||||||||||| ||||    
T  37276450 tattatacccttatttattgaatttcatccaatttaactattccactaactacaattaataagggtgttttagtaaacgatactaattttaccatcaaaa 37276549  T
Q  318 tcaacacaattaatcatttccttaataattgtgca 352  Q
    |||||||| |||||||||||||||||||| |||||    
T  37276550 tcaacacagttaatcatttccttaataatcgtgca 37276584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 163 - 384
Target Start/End: Complemental strand, 14757777 - 14757554
Alignment:
Q  163 ctcaaaataattgtcactttacaataccaatgcaatatttattannnnnnnccactattatactcttatttattgaatttcatcaaacttaactactcca 262  Q
    ||||||||||||||| ||||||||||| ||||||  |||||| |       |||||||||||| |||||||||| ||||||||| |||||||||||| ||    
T  14757777 ctcaaaataattgtc-ctttacaatacaaatgcagaatttataatttttttccactattatacccttatttattaaatttcatcgaacttaactacttca 14757679  T
Q  263 ctaactacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaacacaattaa---tcatttccttaataattgtgcacaaatct 359  Q
    |||||||||||||||||  | ||||||||||||||||||||||||| | || ||||||||||||||||   || |||||||||||||  |  |   ||||    
T  14757678 ctaactacaattaataagagtgttttagtaaatgttactaattttatcgttgaaatcaacacaattaattctcttttccttaataatcctatatctatct 14757579  T
Q  360 taaacgactaatattgtttgacgga 384  Q
    |||||||||||||||||| ||||||    
T  14757578 taaacgactaatattgttagacgga 14757554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 222 - 374
Target Start/End: Original strand, 15699115 - 15699268
Alignment:
Q  222 atactcttatttattgaatttcatcaaacttaactactccactaactacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaa 321  Q
    |||| ||||||||||||| |||||| |||||||||||||||||||||||||||||||| || ||||||||||||| || |||||||||||| ||||||||    
T  15699115 atacccttatttattgaacttcatccaacttaactactccactaactacaattaataagggtgttttagtaaatgatattaattttaccatcaaaatcaa 15699214  T
Q  322 cacaattaatca-tttccttaataattgtgcacaaatcttaaacgactaatatt 374  Q
    |||||||||||| ||| |||||||| ||||||  || |||||||||||| ||||    
T  15699215 cacaattaatcatttttcttaataactgtgcatcaaccttaaacgactattatt 15699268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 218 - 374
Target Start/End: Original strand, 38787330 - 38787486
Alignment:
Q  218 tattatactcttatttattgaatttcatcaaacttaactactccactaactacaattaataatggagttttagtaaatgttactaattttaccattaaaa 317  Q
    |||||||| |||||||||||||||||||| || ||||||||||||||||||| ||||||||| |  ||||| | ||||| ||||| ||||||||| ||||    
T  38787330 tattatacccttatttattgaatttcatccaatttaactactccactaactataattaataaggatgttttggcaaatgatactagttttaccatcaaaa 38787429  T
Q  318 tcaacacaattaatcatttccttaataattgtgcacaaatcttaaacgactaatatt 374  Q
    |||||||||| |||||||||||||||||| ||||| ||| |||||||||||| ||||    
T  38787430 tcaacacaatcaatcatttccttaataatcgtgcataaaccttaaacgactattatt 38787486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 218 - 369
Target Start/End: Complemental strand, 30755070 - 30754919
Alignment:
Q  218 tattatactcttatttattgaatttcatcaaacttaactactccactaactacaattaataatggagttttagtaaatgttactaattttaccattaaaa 317  Q
    ||||||||  ||||||||||||||||||| |||||||||| | ||||||||| |||||||||||   |||||||||||  ||  ||||||||| ||||||    
T  30755070 tattatacctttatttattgaatttcatctaacttaactatttcactaactataattaataatgatattttagtaaataatataaattttacccttaaaa 30754971  T
Q  318 tcaacacaattaatcatttccttaataattgtgcacaaatcttaaacgacta 369  Q
    ||||||||||||||||||||||||||||| ||||| ||||||||||||||||    
T  30754970 tcaacacaattaatcatttccttaataatcgtgcataaatcttaaacgacta 30754919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 164 - 357
Target Start/End: Original strand, 7759150 - 7759343
Alignment:
Q  164 tcaaaataattgtcactttacaataccaatgcaatatttattannnnnnnccactattatactcttatttattgaatttcatcaaacttaactactccac 263  Q
    |||||||||||||||||||||||||  ||||||  ||||||||       ||| |||||||| |||||||||||||||||||  |||||||||| |||||    
T  7759150 tcaaaataattgtcactttacaataataatgcatcatttattatttttttccattattatacccttatttattgaatttcattcaacttaactattccac 7759249  T
Q  264 taactacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaacacaattaatcatttccttaataattgtgcacaaat 357  Q
    ||||||||||||||||  |  |||||||||||| || |||||| |||||| ||||||||||||||||| ||||  |||||||| ||||| ||||    
T  7759250 taactacaattaataagagtattttagtaaatgatattaatttcaccattgaaatcaacacaattaattatttttttaataatcgtgcataaat 7759343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 166 - 363
Target Start/End: Complemental strand, 13579801 - 13579605
Alignment:
Q  166 aaaataattgtcactttacaataccaatgcaatatttattannnnnnnccactattatactcttatttattgaatttcatcaaacttaactactccacta 265  Q
    |||||||||||||||||| |||||| |||||||||||||||         | |||||||| |||||||||||||||||||||||||||| ||||||||||    
T  13579801 aaaataattgtcactttaaaataccgatgcaatatttattattattttt-attattatacccttatttattgaatttcatcaaacttaaatactccacta 13579703  T
Q  266 actacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaacacaattaatcatttccttaataattgtgcacaaatcttaaa 363  Q
    |||||||||||||  || ||||| ||||||| || |||| ||  ||| |||||||||||||||||||||||| ||||||||  |||| ||| ||||||    
T  13579702 actacaattaatatgggtgtttttgtaaatgatattaatattgtcatcaaaatcaacacaattaatcatttctttaataatcatgcataaaccttaaa 13579605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 218 - 366
Target Start/End: Complemental strand, 21910133 - 21909987
Alignment:
Q  218 tattatactcttatttattgaatttcatcaaacttaactactccactaactacaattaataatggagttttagtaaatgttactaattttaccattaaaa 317  Q
    |||||||| ||||||||||||||| ||||||||||||||||||| | ||||| | ||||||| || ||||||| ||| | ||||||||||||||| ||||    
T  21910133 tattatac-cttatttattgaattccatcaaacttaactactcctcaaactatagttaataa-ggtgttttagcaaacgatactaattttaccatcaaaa 21910036  T
Q  318 tcaacacaattaatcatttccttaataattgtgcacaaatcttaaacga 366  Q
    ||||||||||||||||||||||||||||||||||| ||| |||||||||    
T  21910035 tcaacacaattaatcatttccttaataattgtgcataaaccttaaacga 21909987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 163 - 296
Target Start/End: Original strand, 35367736 - 35367869
Alignment:
Q  163 ctcaaaataattgtcactttacaataccaatgcaatatttattannnnnnnccactattatactcttatttattgaatttcatcaaacttaactactcca 262  Q
    |||||||||||||||||||||||||||||||| || ||||||||        ||||||||||| |||||||||||||||||||| |||||||||||||||    
T  35367736 ctcaaaataattgtcactttacaataccaatgaaacatttattagtctttttcactattatacccttatttattgaatttcatctaacttaactactcca 35367835  T
Q  263 ctaactacaattaataatggagttttagtaaatg 296  Q
    ||||||||||||||||| || |||||||||||||    
T  35367836 ctaactacaattaataagggtgttttagtaaatg 35367869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 190 - 374
Target Start/End: Complemental strand, 44707917 - 44707733
Alignment:
Q  190 caatgcaatatttattannnnnnnccactattatactcttatttattgaatttcatcaaacttaactactccactaactacaattaataatggagtttta 289  Q
    |||||||||||||||||       ||||||||||||  ||||||||||||||||||| ||||||||| || |||||||||||||||||||  | ||||||    
T  44707917 caatgcaatatttattatttgtttccactattatacctttatttattgaatttcatccaacttaactgcttcactaactacaattaataaatgtgtttta 44707818  T
Q  290 gtaaatgttactaattttaccattaaaatcaacacaattaatcatttccttaataattgtgcacaaatcttaaacgactaatatt 374  Q
    ||||||  ||||||||||| |||| ||||||| | |||||||||||||  ||||||| ||||| |||  ||||||||||||||||    
T  44707817 gtaaatactactaattttatcattgaaatcaatataattaatcatttctataataatcgtgcaaaaactttaaacgactaatatt 44707733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 163 - 277
Target Start/End: Original strand, 6785190 - 6785304
Alignment:
Q  163 ctcaaaataattgtcactttacaataccaatgcaatatttattannnnnnnccactattatactcttatttattgaatttcatcaaacttaactactcca 262  Q
    |||||||||||||||||||||||||||| |||||| ||||||||       |||||||||||| ||||||||||||||||||||||||||||||||||||    
T  6785190 ctcaaaataattgtcactttacaatacctatgcaacatttattatttttttccactattatacccttatttattgaatttcatcaaacttaactactcca 6785289  T
Q  263 ctaactacaattaat 277  Q
    |||||||||||||||    
T  6785290 ctaactacaattaat 6785304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 169 - 374
Target Start/End: Complemental strand, 32826171 - 32825965
Alignment:
Q  169 ataattgtcactttacaataccaatgcaatatttattannnnnnnccactattatactcttatttattgaatttcatcaaacttaactactcc---acta 265  Q
    ||||||||||||||  ||||||||| ||| ||||||||       ||| ||| |||| ||||||||||||| |||||| ||||||||||||||   ||||    
T  32826171 ataattgtcactttgaaataccaatacaacatttattatttttt-ccattataatacccttatttattgaacttcatccaacttaactactcctccacta 32826073  T
Q  266 actacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaacacaattaatcatttccttaataattgtgcacaaatcttaaacg 365  Q
    | |||||||||||| || ||||||||||||| ||||||||||||||| ||||||||||| ||||||||||||||||||||  |||||  || ||||||||    
T  32826072 attacaattaataaaggtgttttagtaaatgatactaattttaccatcaaaatcaacac-attaatcatttccttaataaccgtgcatcaaccttaaacg 32825974  T
Q  366 actaatatt 374  Q
    |||| ||||    
T  32825973 actattatt 32825965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 218 - 369
Target Start/End: Original strand, 917013 - 917164
Alignment:
Q  218 tattatactcttatttattgaatttcatcaaacttaactactccactaactacaattaataatggagttttagtaaatgttactaattttaccattaaaa 317  Q
    |||| ||| |||||||||| ||||||||  |||||||||| || |||||||||||||||||| ||  |||||||||||| || ||||||||||||| |||    
T  917013 tattttacccttatttattaaatttcatgcaacttaactaatctactaactacaattaataagggtattttagtaaatgatattaattttaccatttaaa 917112  T
Q  318 tcaacacaattaatcatttccttaataattgtgcacaaatcttaaacgacta 369  Q
    |||||| ||||||||||||  |||||||| ||||||||| ||||||||||||    
T  917113 tcaacataattaatcatttatttaataatcgtgcacaaaccttaaacgacta 917164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 218 - 364
Target Start/End: Complemental strand, 34031656 - 34031510
Alignment:
Q  218 tattatactcttatttattgaatttcatcaaacttaactactccactaactacaattaataatggagttttagtaaatgttactaattttaccattaaaa 317  Q
    ||||||||||||||||||||||||||||  ||| | |||| | ||||||||||||||||||| ||  |||||||||||| || |||||||||||||  ||    
T  34031656 tattatactcttatttattgaatttcattcaaccttactattacactaactacaattaataacggtattttagtaaatgatattaattttaccattggaa 34031557  T
Q  318 tcaacacaattaatcatttccttaataattgtgcacaaatcttaaac 364  Q
    ||||||||| |||||||||||||||||||  |||||||| |||||||    
T  34031556 tcaacacaagtaatcatttccttaataatcatgcacaaaccttaaac 34031510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 166 - 369
Target Start/End: Original strand, 2572405 - 2572608
Alignment:
Q  166 aaaataattgtcactttacaataccaatgcaatatttatt-annnnnnnccactattatactcttatttattgaatttcatcaaacttaactactccact 264  Q
    |||| ||||| ||||||| |||| |||||||||||||||| |       ||| ||||||| | ||||||||||||||||||  |||||||||||||||||    
T  2572405 aaaacaattgccactttaaaatatcaatgcaatatttatttatttttttccattattatatttttatttattgaatttcattcaacttaactactccact 2572504  T
Q  265 aactacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaacacaattaatcatttccttaataattgtgcacaaatcttaaac 364  Q
    |||||||||||||||| |   ||||||||||| || ||||||||||||| ||||||| |||||||||||||   |||||||| || ||||||  ||||||    
T  2572505 aactacaattaataattg-tatttagtaaatgatattaattttaccattgaaatcaatacaattaatcattattttaataatcgtacacaaactttaaac 2572603  T
Q  365 gacta 369  Q
    |||||    
T  2572604 gacta 2572608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 166 - 366
Target Start/End: Original strand, 52429279 - 52429481
Alignment:
Q  166 aaaataattgtcactttacaataccaatgcaatatttattannnnnnnccac--tattatactcttatttattgaatttcatcaaacttaactactccac 263  Q
    ||||||||||||||||||||||| |||||||| ||||||||        | |  |||||||| |||||||| ||||||||||  ||||||||||||||||    
T  52429279 aaaataattgtcactttacaatatcaatgcaacatttattattttttttctcattattatacccttatttaatgaatttcattcaacttaactactccac 52429378  T
Q  264 taactacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaacacaattaatcatttccttaataattgtgcacaaatcttaaa 363  Q
    |||||||||||||||| ||  ||||| ||||||  | ||| ||||||||   |||||||  |||||||||||||||| ||||| ||||||||| ||||||    
T  52429379 taactacaattaataagggtattttaataaatgacattaaatttaccatcgtaatcaaccaaattaatcatttccttcataatcgtgcacaaaccttaaa 52429478  T
Q  364 cga 366  Q
    |||    
T  52429479 cga 52429481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 218 - 382
Target Start/End: Complemental strand, 4441732 - 4441568
Alignment:
Q  218 tattatactcttatttattgaatttcatcaaacttaactactccactaactacaattaataatggagttttagtaaatgttactaattttaccattaaaa 317  Q
    ||||||||  ||||||||| ||||||||| || |||| ||||||||||||||||||||| || || |||||||||||    | |||||||||||||||||    
T  4441732 tattatacctttatttattaaatttcatctaatttaattactccactaactacaattaacaagggtgttttagtaaagacgattaattttaccattaaaa 4441633  T
Q  318 tcaacacaattaatcatttccttaataattgtgcacaaatcttaaacgactaatattgtttgacg 382  Q
    ||| |||||||||| |||| ||||||||   |||||||||||||||| |||||| ||||| ||||    
T  4441632 tcaccacaattaattattttcttaataaagatgcacaaatcttaaacaactaatgttgttagacg 4441568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 228 - 346
Target Start/End: Original strand, 10495838 - 10495955
Alignment:
Q  228 ttatttattgaatttcatcaaacttaactactccactaactacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaacacaat 327  Q
    ||||||||||||||||||| ||||||||||||||||||| ||||||||||||  | ||||||||||||| ||||||||||||||| |||||||||| |||    
T  10495838 ttatttattgaatttcatccaacttaactactccactaattacaattaataa-agtgttttagtaaatgatactaattttaccatcaaaatcaacaaaat 10495936  T
Q  328 taatcatttccttaataat 346  Q
    |||| ||||  ||||||||    
T  10495937 taataatttttttaataat 10495955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 218 - 374
Target Start/End: Complemental strand, 6160588 - 6160432
Alignment:
Q  218 tattatactcttatttattgaatttcatcaaacttaactactccactaactacaattaataatggagttttagtaaatgttactaattttaccattaaaa 317  Q
    |||||||| ||| ||||||||||| |||  |||||||||| |||| ||||||||||||||||  |  |||||||||||  ||||||||||| |||| |||    
T  6160588 tattatacccttgtttattgaattacattcaacttaactattccattaactacaattaataagagtattttagtaaataatactaattttatcattgaaa 6160489  T
Q  318 tcaacacaattaatcatttccttaataattgtgcacaaatcttaaacgactaatatt 374  Q
    ||||||||||||||||||| ||||| ||| || ||||| || |||||||||| ||||    
T  6160488 tcaacacaattaatcattttcttaaaaatcgtacacaagtcgtaaacgactattatt 6160432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 230 - 361
Target Start/End: Original strand, 24880874 - 24881008
Alignment:
Q  230 atttattgaatttcatcaaactta---actactccactaactacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaacacaa 326  Q
    ||||||||||||||||| ||||||   ||||||||||||||||||||||||||  |  |||||||||||| || ||||||||||||| ||||||||| ||    
T  24880874 atttattgaatttcatccaacttactaactactccactaactacaattaataaaagtattttagtaaatgatattaattttaccattgaaatcaacataa 24880973  T
Q  327 ttaatcatttccttaataattgtgcacaaatctta 361  Q
    | |||||||||| |||||||| |||||||| ||||    
T  24880974 tcaatcatttccgtaataattatgcacaaacctta 24881008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 164 - 369
Target Start/End: Complemental strand, 31978832 - 31978630
Alignment:
Q  164 tcaaaataattgtcactttacaataccaatgcaatatttattannnnnnnccactattatactcttatttattgaatttcatcaaacttaactactccac 263  Q
    ||||||||||||| ||||||||||||||||| | ||||| ||        ||| |||||||| |||||||| ||||||| ||  |||||||||||||||     
T  31978832 tcaaaataattgttactttacaataccaatgtagtatttttt---ttttcccattattatacccttatttaatgaatttaattcaacttaactactccat 31978736  T
Q  264 taactacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaacacaattaatcatttccttaataattgtgcacaaatcttaaa 363  Q
    |||||| |||||||||      |||||||| || || ||||||||||||| |||||||||||||||||| ||| ||||||||| |||||||||  |||||    
T  31978735 taactataattaataagaatagtttagtaagtgatattaattttaccattgaaatcaacacaattaatctttttcttaataatcgtgcacaaactttaaa 31978636  T
Q  364 cgacta 369  Q
    ||||||    
T  31978635 cgacta 31978630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 163 - 374
Target Start/End: Complemental strand, 41122007 - 41121795
Alignment:
Q  163 ctcaaaataattgtcactttacaataccaatgcaatatttattannnnnnnccactattatactcttat---ttattgaatttcatcaaacttaactact 259  Q
    ||||||||||||||||||||| |||| |||| ||| ||||||||        || |||||||| |||||   ||||| ||||||||||||||     |||    
T  41122007 ctcaaaataattgtcactttaaaatatcaatacaacatttattattttttttcattattatacccttataatttattaaatttcatcaaact-----act 41121913  T
Q  260 ccactaactacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaacacaattaatcatttcc---ttaataattgtgcacaaa 356  Q
    |||||||||||||||||||| ||  |||||||||||  | ||||||||||||| |||||||||||||||||||||||||   ||||||| |||||| |||    
T  41121912 ccactaactacaattaataagggtattttagtaaattatgctaattttaccatcaaaatcaacacaattaatcatttcctaattaataaatgtgcataaa 41121813  T
Q  357 tcttaaacgactaatatt 374  Q
     ||||||| |||| ||||    
T  41121812 ccttaaacaactattatt 41121795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 219 - 342
Target Start/End: Complemental strand, 8896460 - 8896337
Alignment:
Q  219 attatactcttatttattgaatttcatcaaacttaactactccactaactacaattaataatggagttttagtaaatgttactaattttaccattaaaat 318  Q
    |||||||  ||||||||||||||||||| |||||||| |||||||||||||||||||||||     |||||||||||| || ||||||||||||| ||||    
T  8896460 attatacctttatttattgaatttcatccaacttaaccactccactaactacaattaataaatatattttagtaaatgatattaattttaccattgaaat 8896361  T
Q  319 caacacaattaatcatttccttaa 342  Q
    ||||||||| |||||||| |||||    
T  8896360 caacacaatcaatcattttcttaa 8896337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 166 - 374
Target Start/End: Original strand, 45331276 - 45331486
Alignment:
Q  166 aaaataattgtcactttacaataccaatgcaatatttattannnnnnnccactattatactcttatttattgaatttcatcaaacttaacta---ctcca 262  Q
    ||||||||||| |||||| ||||||||||||| ||||||||       ||| |||  ||| || |||||||||| |||||| ||||||||||   |||||    
T  45331276 aaaataattgttactttaaaataccaatgcaacatttattatttttt-ccattatattaccctaatttattgaacttcatccaacttaactattcctcca 45331374  T
Q  263 ctaactacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaacacaattaatcatttccttaataattgtgcacaaatcttaa 362  Q
     |||||||||||||||| || ||||||||||||| || |||||||||||| |||||||||| ||||||| |||| ||||||||  ||||   || |||||    
T  45331375 ttaactacaattaataagggtgttttagtaaatgatattaattttaccatcaaaatcaacataattaattattttcttaataaccgtgcgtcaaccttaa 45331474  T
Q  363 acgactaatatt 374  Q
    ||||||| ||||    
T  45331475 acgactattatt 45331486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 166 - 352
Target Start/End: Original strand, 9379169 - 9379355
Alignment:
Q  166 aaaataattgtcactttacaataccaatgcaatatttattannnnnnnccactattatactcttatttattgaatttcatcaaacttaactactcc-act 264  Q
    ||||||||||||| |||| |||| ||||||||||||||||        ||| ||||||||   |||||||| |||||||||||||||||||||||| |||    
T  9379169 aaaataattgtcattttagaatatcaatgcaatatttatt-tatttttccattattatacctatatttattaaatttcatcaaacttaactactcccact 9379267  T
Q  265 aactacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaacacaattaatcatttccttaataattgtgca 352  Q
    |||||||||||||||     ||||| |||||| || |||||||| |||||||||||  ||||||||||||||| |||| |||||||||    
T  9379268 aactacaattaataaatatattttaataaatgatattaattttatcattaaaatcattacaattaatcatttctttaaaaattgtgca 9379355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 218 - 374
Target Start/End: Original strand, 11449875 - 11450028
Alignment:
Q  218 tattatactcttatttattgaatttcatcaaacttaactactccactaactacaattaataatggagttttagtaaatgttactaattttaccattaaaa 317  Q
    |||||||| |||||||||||||||||||| || || ||||||| | ||||||||||||||||  | ||| ||| ||||  || ||||||||||||| |||    
T  11449875 tattatac-cttatttattgaatttcatccaattttactactctattaactacaattaataaatgtgttatagaaaat--tattaattttaccattgaaa 11449971  T
Q  318 tcaacacaattaatcatttccttaataattgtgcacaaatcttaaacgactaatatt 374  Q
    |||||| |||||| ||||||||||||||| ||||||||| ||||||| |||| ||||    
T  11449972 tcaacataattaaccatttccttaataatcgtgcacaaaccttaaacaactattatt 11450028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 228 - 374
Target Start/End: Original strand, 42409993 - 42410139
Alignment:
Q  228 ttatttattgaatttcatcaaacttaactactccactaactacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaacacaat 327  Q
    |||||||||||| ||||||  |||||||||  | |||||||||||||||||| || | ||||||||||| || |||||||||||| ||||||||||||||    
T  42409993 ttatttattgaacttcatcctacttaactatccaactaactacaattaataagggtgctttagtaaatgatattaattttaccatcaaaatcaacacaat 42410092  T
Q  328 taatcatttccttaataattgtgcacaaatcttaaacgactaatatt 374  Q
    |||||||||  |||||||  |||||  || ||||||| |||| ||||    
T  42410093 taatcatttttttaataaccgtgcatcaaccttaaacaactattatt 42410139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 215 - 374
Target Start/End: Complemental strand, 22856369 - 22856217
Alignment:
Q  215 cactattatactcttatttattgaatttcatcaaacttaactactccactaactacaattaataatggagttttagtaaatgttactaattttaccatta 314  Q
    |||||||||||| ||||||||||||||||||| | |||||||||||||||||||||||||||| | ||  |||||||||||| || ||||||||  |||     
T  22856369 cactattatacttttatttattgaatttcatccagcttaactactccactaactacaattaattagggtattttagtaaatggtattaattttatgattg 22856270  T
Q  315 aaatcaacacaattaatcatttccttaataattgtgcacaaatcttaaacgactaatatt 374  Q
    |||       |||||||||||||||||| || ||| ||||||  ||||||||||| ||||    
T  22856269 aaa-------aattaatcatttccttaaaaaatgtacacaaacattaaacgactattatt 22856217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 220 - 368
Target Start/End: Complemental strand, 5179526 - 5179378
Alignment:
Q  220 ttatactcttatttattgaatttcatcaaacttaactactccactaactacaattaataatggagttttagtaaatgttactaattttaccattaaaatc 319  Q
    ||||||||||||||  ||||||||||| || ||| ||||||||||||||||||||||||    |  ||||||||||| |||| ||||| | ||| |||||    
T  5179526 ttatactcttatttcctgaatttcatccaatttatctactccactaactacaattaatatgaaaactttagtaaatgatactcattttgctattgaaatc 5179427  T
Q  320 aacacaattaatcatttccttaataattgtgcacaaatcttaaacgact 368  Q
    |||||||||||||||||  |||| ||| ||| ||||| |||||||||||    
T  5179426 aacacaattaatcattttgttaagaatcgtgtacaaaccttaaacgact 5179378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 166 - 356
Target Start/End: Original strand, 27721470 - 27721658
Alignment:
Q  166 aaaataattgtcactttacaataccaatgcaatatttattannnnnnnccactattatactcttatttattgaatttcatcaaacttaactactccacta 265  Q
    |||||||||| ||||||||||||| ||||||  ||||||||       ||||||||||||| ||||||||||||||| ||| || ||||||| || ||||    
T  27721470 aaaataattgccactttacaatacaaatgcatcatttattatttttt-ccactattatacttttatttattgaattttatccaatttaactattctacta 27721568  T
Q  266 actacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaacacaattaatcatttccttaataattgtgcacaaa 356  Q
    ||||||||||||| |||   |||| |||||   | ||||||||||||||||||||||||| ||||| ||||  |||| |||||| ||||||    
T  27721569 actacaattaatattggtactttaataaataaaaataattttaccattaaaatcaacacatttaat-atttttttaaaaattgtacacaaa 27721658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 166 - 374
Target Start/End: Original strand, 3260529 - 3260732
Alignment:
Q  166 aaaataattgtcactttacaataccaatgcaatatttattannnnnnnccactattatactcttatttattgaatttcatcaaacttaactactccacta 265  Q
    ||||||||| |||||||| ||||| ||| ||||||||||||       | |||||||||  |||||||||| ||||||||||||||||||| ||||||||    
T  3260529 aaaataattatcactttagaatactaatacaatatttattatttgtt-ctactattataaacttatttattcaatttcatcaaacttaacttctccacta 3260627  T
Q  266 actacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaacacaattaatcatttcctt-aataattgtgcacaaatcttaaac 364  Q
    |||||||||||||| |     ||||||| |  ||||| |||||  ||| |||||||||||| |||||||||| || || |||  | ||||||||||||||    
T  3260628 actacaattaataagg-----ttagtaattaatactacttttattattgaaatcaacacaactaatcatttctttaaaaaatcatacacaaatcttaaac 3260722  T
Q  365 gactaatatt 374  Q
    ||||| ||||    
T  3260723 gactattatt 3260732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 218 - 336
Target Start/End: Complemental strand, 44761660 - 44761542
Alignment:
Q  218 tattatactcttatttattgaatttcatcaaacttaactactccactaactacaattaataatggagttttagtaaatgttactaattttaccattaaaa 317  Q
    |||||||| |||||||||||||||||||  |||||||| | ||||||||||| ||||||||| |   |||||||||||| || |||||||| ||||||||    
T  44761660 tattatacccttatttattgaatttcattcaacttaaccattccactaactataattaataaagatattttagtaaatgatattaattttatcattaaaa 44761561  T
Q  318 tcaacacaattaatcattt 336  Q
    | |||| ||||||||||||    
T  44761560 ttaacataattaatcattt 44761542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 248 - 376
Target Start/End: Original strand, 12151195 - 12151323
Alignment:
Q  248 aacttaactactccactaactacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaacacaattaatcatttccttaataatt 347  Q
    ||||||||| |||||||||||||||||||| |     |||||||||||| ||||||||||| |||| ||||||||| ||||||| || |||||||||||     
T  12151195 aacttaactgctccactaactacaattaattacaatattttagtaaatgatactaattttatcattgaaatcaacataattaataatctccttaataatc 12151294  T
Q  348 gtgcacaaatcttaaacgactaatattgt 376  Q
     | |||||| |||||||||| ||||||||    
T  12151295 atacacaaaccttaaacgacaaatattgt 12151323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 163 - 356
Target Start/End: Complemental strand, 35682977 - 35682796
Alignment:
Q  163 ctcaaaataattgtcactttacaataccaatgcaatatttattannnnnnnccactattatactcttatttattgaatttcatcaaacttaactactcca 262  Q
    ||||||||||||| || |||| |||| |||||||||||||||||       |||||||||||| |||||||||||||||||||| |||||||||||||||    
T  35682977 ctcaaaataattgccaatttagaatatcaatgcaatatttattatttttt-ccactattatacccttatttattgaatttcatccaacttaactactcca 35682879  T
Q  263 ctaactacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaacacaattaatcatttccttaataattgtgcacaaa 356  Q
     ||| || |||||          |||| |||||| ||||||| ||| |||| |||||||||||||||||| |||| |||| ||| |||||||||    
T  35682878 gtaa-taaaatta----------tttaataaatgatactaatgttatcattgaaatcaacacaattaatcttttcgttaaaaatcgtgcacaaa 35682796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 221 - 336
Target Start/End: Original strand, 31154120 - 31154235
Alignment:
Q  221 tatactcttatttattgaatttcatcaaacttaactactccactaactacaattaataatggagttttagtaaatgttactaattttaccattaaaatca 320  Q
    ||||| |||||||| |||||||||||||||||||  |||| || |||||||||||||||  |   ||||||| ||  ||||||||||| |||||||||||    
T  31154120 tatacacttatttactgaatttcatcaaacttaagcactctaccaactacaattaataaatgcaatttagtagataatactaattttatcattaaaatca 31154219  T
Q  321 acacaattaatcattt 336  Q
    ||||||||||||||||    
T  31154220 acacaattaatcattt 31154235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 218 - 328
Target Start/End: Original strand, 7351625 - 7351735
Alignment:
Q  218 tattatactcttatttattgaatttcatcaaacttaactactccactaactacaattaataatggagttttagtaaatgttactaattttaccattaaaa 317  Q
    |||||||||||||||||||||||||  || ||||||| || ||||||||||| ||||||||| |   |||||||||||  || |||||||| ||||||||    
T  7351625 tattatactcttatttattgaattttgtccaacttaattattccactaactagaattaataaggttattttagtaaataatattaattttatcattaaaa 7351724  T
Q  318 tcaacacaatt 328  Q
    |||||||||||    
T  7351725 tcaacacaatt 7351735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 285 - 374
Target Start/End: Complemental strand, 6267918 - 6267829
Alignment:
Q  285 ttttagtaaatgttactaattttaccattaaaatcaacacaattaatcatttccttaataattgtgcacaaatcttaaacgactaatatt 374  Q
    |||||||| ||| ||||| ||||| |||||||||||||||||||||||||||| |||| ||| ||||||||| |||||||||||| ||||    
T  6267918 ttttagtacatgatactagttttatcattaaaatcaacacaattaatcatttctttaaaaatagtgcacaaaccttaaacgactattatt 6267829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 284 - 369
Target Start/End: Complemental strand, 43500847 - 43500762
Alignment:
Q  284 gttttagtaaatgttactaattttaccattaaaatcaacacaattaatcatttccttaataattgtgcacaaatcttaaacgacta 369  Q
    |||||||||||||  ||||||| |||||| |||||||||||||||||| |||||||||||||| ||||| ||| ||||||||||||    
T  43500847 gttttagtaaatgaaactaattataccatcaaaatcaacacaattaataatttccttaataatcgtgcataaaccttaaacgacta 43500762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 221 - 295
Target Start/End: Complemental strand, 25089212 - 25089137
Alignment:
Q  221 tatactcttatttattgaatttcatcaaacttaactactccactaactacaattaataatgga-gttttagtaaat 295  Q
    ||||| |||||||||||||||||||| |||||||||||| ||||||||||||||||||| ||| ||||||||||||    
T  25089212 tatacccttatttattgaatttcatccaacttaactacttcactaactacaattaataaaggatgttttagtaaat 25089137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 230 - 336
Target Start/End: Original strand, 29074885 - 29074991
Alignment:
Q  230 atttattgaatttcatcaaacttaactactccactaactacaattaataatgga-gttttagtaaatgttactaattttaccattaaaatcaacacaatt 328  Q
    ||||||||||||||||| |||||||||| | |  |||| ||||||||| ||||| |||||| |||||| || |||||||||||||||||||||||||| |    
T  29074885 atttattgaatttcatccaacttaactattacgttaacaacaattaat-atggatgttttaataaatgatattaattttaccattaaaatcaacacaact 29074983  T
Q  329 aatcattt 336  Q
    ||||||||    
T  29074984 aatcattt 29074991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 166 - 374
Target Start/End: Original strand, 3312056 - 3312256
Alignment:
Q  166 aaaataattgtcactttacaataccaatgcaatatttattannnnnnnccactattatactcttatttattgaatttcatcaaacttaactactccacta 265  Q
    |||||||||||||||||| |||| |||| ||| ||||||||       |||||||||||||||||||||||  | |         ||| |||||||||||    
T  3312056 aaaataattgtcactttataatatcaatacaacatttattattatattccactattatactcttatttattccacta--------ttatctactccacta 3312147  T
Q  266 actacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaacacaattaatcatttccttaataattgtgcacaaatcttaaacg 365  Q
    |||||||||||||      || ||||||||| ||||||||| | |||||||||||||||||||||||||||| || | |||| |  |||||||||||| |    
T  3312148 actacaattaatatcaatattatagtaaatgatactaatttaatcattaaaatcaacacaattaatcatttcttttaaaattatatacaaatcttaaatg 3312247  T
Q  366 actaatatt 374  Q
    |||| ||||    
T  3312248 actattatt 3312256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 163 - 282
Target Start/End: Original strand, 4659711 - 4659829
Alignment:
Q  163 ctcaaaataattgtcactttacaataccaatgcaatatttattannnnnnnccactattatactcttatttattgaatttcatcaaacttaactactcca 262  Q
    ||||||||||||||||||||||||||||||||||| ||| |||        |||||||||||  |||||||||||||||||||  ||||||| |||||||    
T  4659711 ctcaaaataattgtcactttacaataccaatgcaacatt-atttattttttccactattatatccttatttattgaatttcattcaacttaattactcca 4659809  T
Q  263 ctaactacaattaataatgg 282  Q
    |||||||  |||||| ||||    
T  4659810 ctaactatcattaatgatgg 4659829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 214 - 276
Target Start/End: Original strand, 37539112 - 37539174
Alignment:
Q  214 ccactattatactcttatttattgaatttcatcaaacttaactactccactaactacaattaa 276  Q
    ||||||| |||| |||||||||||||||||||||||||||||||||| |||||||||||||||    
T  37539112 ccactatgatacccttatttattgaatttcatcaaacttaactactctactaactacaattaa 37539174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 163 - 276
Target Start/End: Complemental strand, 26256272 - 26256159
Alignment:
Q  163 ctcaaaataattgtcactttacaataccaatgcaatatttattannnnnnnccactattatactcttatttattgaatttcatcaaacttaactactcca 262  Q
    ||||||||||||| ||||||| |||||||||| |  ||||||||       ||||||||||| |||| |||||||| ||||||| ||||||||||||| |    
T  26256272 ctcaaaataattgccactttataataccaatgtatcatttattaattctttccactattatattcttctttattgactttcatccaacttaactactcta 26256173  T
Q  263 ctaactacaattaa 276  Q
     |||||||||||||    
T  26256172 ttaactacaattaa 26256159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 216 - 356
Target Start/End: Original strand, 27896942 - 27897082
Alignment:
Q  216 actattatactcttatttattgaatttcatcaaacttaactactccactaactacaattaataatggagttttagtaaatgttactaattttaccattaa 315  Q
    ||||||||||  ||||||||| ||||||||| |||| || |||||||||||||| |||||||||     ||||  |||||  ||||||||||| ||||||    
T  27896942 actattatacctttatttattaaatttcatccaactaaattactccactaactataattaataagaatattttgataaattatactaattttatcattaa 27897041  T
Q  316 aatcaacacaattaatcatttccttaataattgtgcacaaa 356  Q
    |||||||||  ||||| |||||||||| |||  ||||||||    
T  27897042 aatcaacacgtttaattatttccttaaaaatcatgcacaaa 27897082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 214 - 318
Target Start/End: Complemental strand, 29778529 - 29778425
Alignment:
Q  214 ccactattatactcttatttattgaatttcatcaaacttaactactccactaactacaattaataatggagttttagtaaatgttactaattttaccatt 313  Q
    ||||||||||| | ||||||||||||||| ||| ||||||  | ||  ||||||||||||||||||||   |||||||||||| ||||||||||||||||    
T  29778529 ccactattatattattatttattgaattttatccaacttaggttcttaactaactacaattaataatgatattttagtaaatgatactaattttaccatt 29778430  T
Q  314 aaaat 318  Q
     ||||    
T  29778429 gaaat 29778425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 286 - 368
Target Start/End: Original strand, 27687298 - 27687380
Alignment:
Q  286 tttagtaaatgttactaattttaccattaaaatcaacacaattaatcatttccttaataattgtgcacaaatcttaaacgact 368  Q
    ||||||||||  || ||||||||||||| |||||||||||| |||||||||  |||||||||||||||||| |||||| ||||    
T  27687298 tttagtaaataatattaattttaccattgaaatcaacacaactaatcatttttttaataattgtgcacaaaccttaaaagact 27687380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 285 - 342
Target Start/End: Original strand, 43614453 - 43614510
Alignment:
Q  285 ttttagtaaatgttactaattttaccattaaaatcaacacaattaatcatttccttaa 342  Q
    ||||||| |||| |||||||||||||||||||||||||||| ||||||||||||||||    
T  43614453 ttttagtcaatgatactaattttaccattaaaatcaacacacttaatcatttccttaa 43614510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 298 - 369
Target Start/End: Complemental strand, 35367694 - 35367622
Alignment:
Q  298 tactaattttaccattaaaatcaacacaattaatcatttccttaataattgtgcacaaa-tcttaaacgacta 369  Q
    ||||||||||||||| ||||||||||||||||||||||| ||||||||| ||||| |||  ||||||||||||    
T  35367694 tactaattttaccatcaaaatcaacacaattaatcattttcttaataatcgtgcataaacgcttaaacgacta 35367622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 231 - 346
Target Start/End: Complemental strand, 32970683 - 32970568
Alignment:
Q  231 tttattgaatttcatcaaacttaactactccactaactacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaacacaattaa 330  Q
    |||||||||||| ||| ||||||| || |  |||||| ||||||||||   |  |||||||||||  || |||||||| |||| ||||||||||||||||    
T  32970683 tttattgaattttatccaacttaattattttactaacaacaattaatacgagtattttagtaaataatattaattttatcattgaaatcaacacaattaa 32970584  T
Q  331 tcatttccttaataat 346  Q
    |||||| |||||||||    
T  32970583 tcattttcttaataat 32970568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 164 - 279
Target Start/End: Original strand, 39887769 - 39887885
Alignment:
Q  164 tcaaaataattgtcactttacaataccaatgcaatatttattannnnnnnc-cactattatactcttatttattgaatttcatcaaacttaactactcca 262  Q
    |||||||||||||||||||| ||||  | |||||||||| |||       | |||| ||||||  ||||||||||||||||||||||||||| ||||| |    
T  39887769 tcaaaataattgtcactttaaaatattagtgcaatatttgttatttttttctcactgttatacatttatttattgaatttcatcaaacttaattactcaa 39887868  T
Q  263 ctaactacaattaataa 279  Q
    |||||||| ||||||||    
T  39887869 ctaactactattaataa 39887885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 243 - 336
Target Start/End: Original strand, 6365645 - 6365738
Alignment:
Q  243 catcaaacttaactactccactaactacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaacacaattaatcattt 336  Q
    ||||||||||||||| | |||||||||||||||| ||||   ||||| |||||  ||||||||| |  ||| ||||||||||||||||||||||    
T  6365645 catcaaacttaactaattcactaactacaattaacaatgatattttaataaataatactaatttgattattgaaatcaacacaattaatcattt 6365738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 264 - 345
Target Start/End: Original strand, 22181371 - 22181452
Alignment:
Q  264 taactacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaacacaattaatcatttccttaataa 345  Q
    |||||||||| | ||| || ||||||||||||| || ||||||||||||| |||| ||| ||| ||||||||||||||||||    
T  22181371 taactacaataactaagggtgttttagtaaatgatattaattttaccattgaaatgaactcaactaatcatttccttaataa 22181452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 217 - 342
Target Start/End: Complemental strand, 26258070 - 26257945
Alignment:
Q  217 ctattatactcttatttattgaatttcatcaaacttaactactccactaactacaattaataatggagttttagtaaatgttactaattttaccattaaa 316  Q
    ||||||||| |||||||| ||  ||||||| ||||||| || || |||||| || |||||||| ||  |||||||||||| || | ||||| | ||| ||    
T  26258070 ctattatacccttatttactggttttcatccaacttaattattctactaaccacgattaataaaggtattttagtaaatgataatcattttgctattgaa 26257971  T
Q  317 atcaacacaattaatcatttccttaa 342  Q
    ||||| ||||||||||||||| ||||    
T  26257970 atcaatacaattaatcatttctttaa 26257945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 215 - 336
Target Start/End: Original strand, 41080586 - 41080705
Alignment:
Q  215 cactattatactcttatttattgaatttcatcaaacttaactactccactaactacaattaataatggagttttagtaaatgttactaattttaccatta 314  Q
    |||||| ||||  |||||||||||||| |||| |||||| || ||||||||| |||||||||||| |   ||| | |||||| ||  |||||||| ||||    
T  41080586 cactatcatacctttatttattgaatt-catccaacttacct-ctccactaattacaattaataaagatatttcaataaatgatataaattttactatta 41080683  T
Q  315 aaatcaacacaattaatcattt 336  Q
    ||||||||||||||||||||||    
T  41080684 aaatcaacacaattaatcattt 41080705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 285 - 345
Target Start/End: Complemental strand, 15444543 - 15444483
Alignment:
Q  285 ttttagtaaatgttactaattttaccattaaaatcaacacaattaatcatttccttaataa 345  Q
    |||||||||||  |||  |||||||||||||||||||||| ||||||||||||||||||||    
T  15444543 ttttagtaaataatacatattttaccattaaaatcaacactattaatcatttccttaataa 15444483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 215 - 279
Target Start/End: Original strand, 37177822 - 37177886
Alignment:
Q  215 cactattatactcttatttattgaatttcatcaaacttaactactccactaactacaattaataa 279  Q
    |||||||||||||||||||||| ||||| ||| ||||||||||||  ||||||||| ||||||||    
T  37177822 cactattatactcttatttatttaattttatccaacttaactactatactaactaccattaataa 37177886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 231 - 314
Target Start/End: Complemental strand, 32219777 - 32219694
Alignment:
Q  231 tttattgaatttcatcaaacttaactactccactaactacaattaataatggagttttagtaaatgttactaattttaccatta 314  Q
    |||||||||||||||| |||||||| ||||||| ||||| |||||||||  |  ||||| |||||| || ||||||||||||||    
T  32219777 tttattgaatttcatccaacttaaccactccacaaactataattaataagagtattttaataaatgatattaattttaccatta 32219694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 255 - 358
Target Start/End: Original strand, 45615557 - 45615660
Alignment:
Q  255 ctactccactaactacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaacacaattaatcatttccttaataattgtgcaca 354  Q
    |||||||||||||||| |||||||| ||| ||||||||||||  |||  |||||  |||||||| ||||||  ||||||||| ||||| || || |||||    
T  45615557 ctactccactaactactattaataagggaattttagtaaatgaaactccttttataattaaaattaacacagctaatcattttcttaagaactgggcaca 45615656  T
Q  355 aatc 358  Q
    ||||    
T  45615657 aatc 45615660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 264 - 370
Target Start/End: Complemental strand, 51028576 - 51028470
Alignment:
Q  264 taactacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaacacaattaatcatttccttaataattgtgcacaaatcttaaa 363  Q
    ||||||||||||||||     ||||| |||||| |||||| ||||  |||||||||||||||||||||| ||||||| | ||| ||   |||||||||||    
T  51028576 taactacaattaataaaaatattttaataaatgctactaactttattattaaaatcaacacaattaatcgtttccttgaaaatcgtatgcaaatcttaaa 51028477  T
Q  364 cgactaa 370  Q
    |||||||    
T  51028476 cgactaa 51028470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 264 - 367
Target Start/End: Original strand, 35538678 - 35538781
Alignment:
Q  264 taactacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaacacaattaatcatttccttaataattgtgcacaaatcttaaa 363  Q
    |||||||||||||||| |   |||||||||||  ||   |||||| |||| ||||||||||||||||| |||| ||||| ||||||  | ||||||||||    
T  35538678 taactacaattaataaggatattttagtaaataatatccattttatcattgaaatcaacacaattaataattttcttaaaaattgtaaataaatcttaaa 35538777  T
Q  364 cgac 367  Q
    ||||    
T  35538778 cgac 35538781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 255 - 345
Target Start/End: Original strand, 11642196 - 11642281
Alignment:
Q  255 ctactccactaactacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaacacaattaatcatttccttaataa 345  Q
    |||||| |||||||| |||||||||  | |||||||||||| |     |||||||||||||||||||||  ||||||||||| ||||||||    
T  11642196 ctactctactaactataattaataaatgtgttttagtaaatat-----attttaccattaaaatcaacaatattaatcattttcttaataa 11642281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 163 - 269
Target Start/End: Complemental strand, 17988929 - 17988823
Alignment:
Q  163 ctcaaaataattgtcactttacaataccaatgcaatatttattannnnnnnccactattatactcttatttattgaatttcatcaaacttaactactcca 262  Q
    |||||||||||||||| |||| ||||  ||||||| ||||||||       |||||||||||||| ||||||||   || |||| || ||||||||||||    
T  17988929 ctcaaaataattgtcattttaaaatattaatgcaacatttattatttctttccactattatactcatatttattttgttacatccaaattaactactcca 17988830  T
Q  263 ctaacta 269  Q
     ||||||    
T  17988829 ttaacta 17988823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 264 - 350
Target Start/End: Original strand, 44122248 - 44122336
Alignment:
Q  264 taactacaattaataatggagttttagtaaatgt--tactaattttaccattaaaatcaacacaattaatcatttccttaataattgtg 350  Q
    |||||| ||||||||| || |||||||||||| |  |||  ||||| |||||||||||||||| |||||||||||| ||| ||| ||||    
T  44122248 taactataattaataagggtgttttagtaaatatgatacatatttttccattaaaatcaacactattaatcatttctttagtaactgtg 44122336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 249 - 337
Target Start/End: Complemental strand, 34688945 - 34688857
Alignment:
Q  249 acttaactactccactaactacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaacacaattaatcatttc 337  Q
    ||||||||| || |||||||| |||||||||    | ||||||||| | ||||||||||| |||| ||||||||  |||||||||||||    
T  34688945 acttaactattcaactaactaaaattaataagcctggtttagtaaacgatactaattttatcatttaaatcaaccaaattaatcatttc 34688857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #83
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 249 - 337
Target Start/End: Complemental strand, 34693473 - 34693385
Alignment:
Q  249 acttaactactccactaactacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaacacaattaatcatttc 337  Q
    ||||||||| || |||||||| |||||||||    | ||||||||| | ||||||||||| |||| ||||||||  |||||||||||||    
T  34693473 acttaactattcaactaactaaaattaataagcctggtttagtaaacgatactaattttatcatttaaatcaaccaaattaatcatttc 34693385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #84
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 249 - 336
Target Start/End: Complemental strand, 44426836 - 44426746
Alignment:
Q  249 acttaactactccactaactacaattaataatggagttttagtaaatgttact---aattttaccattaaaatcaacacaattaatcattt 336  Q
    |||||| | ||||||||| |||||||||||| |  ||||||||||||| ||||   |||||||||||| |||||||| ||| |||| ||||    
T  44426836 acttaattgctccactaattacaattaataaagatgttttagtaaatgatactacaaattttaccattgaaatcaactcaactaattattt 44426746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #85
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 228 - 279
Target Start/End: Complemental strand, 2137488 - 2137437
Alignment:
Q  228 ttatttattgaatttcatcaaacttaactactccactaactacaattaataa 279  Q
    ||||||||||||||| ||| ||||||| ||||||| |||| |||||||||||    
T  2137488 ttatttattgaattttatccaacttaaatactccaataacaacaattaataa 2137437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #86
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 167 - 277
Target Start/End: Complemental strand, 9412982 - 9412873
Alignment:
Q  167 aaataattgtcactttacaataccaatgcaatattta-ttannnnnnnccactattatactcttatttattgaatttcatcaaacttaactactccacta 265  Q
    ||||||||||||||||||||||| ||||||| ||||| |||        ||||||  |||  ||||||||||||||||||| |||  ||||| |||| ||    
T  9412982 aaataattgtcactttacaatactaatgcaaaatttatttatttattttcactat--tacaattatttattgaatttcatccaacccaactattccatta 9412885  T
Q  266 actacaattaat 277  Q
    ||||||||||||    
T  9412884 actacaattaat 9412873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #87
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 253 - 333
Target Start/End: Complemental strand, 17988654 - 17988572
Alignment:
Q  253 aactactccactaactacaattaataatggagttttagtaaatgtta--ctaattttaccattaaaatcaacacaattaatca 333  Q
    ||||||| || ||||||||||||||||  |  |||||||||||  ||  ||||||||| |||| |||||||||||||||||||    
T  17988654 aactacttcattaactacaattaataagagtattttagtaaataatatactaattttaacattgaaatcaacacaattaatca 17988572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #88
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 249 - 331
Target Start/End: Original strand, 15057450 - 15057531
Alignment:
Q  249 acttaactactccactaactacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaacacaattaat 331  Q
    |||||||||||||| |||||| |||||||||    |||||| || ||| |||||||||||| ||||||||||||  |||||||    
T  15057450 acttaactactcca-taactataattaataaaaatgttttaatatatgatactaattttactattaaaatcaacttaattaat 15057531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #89
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 229 - 279
Target Start/End: Original strand, 15904751 - 15904801
Alignment:
Q  229 tatttattgaatttcatcaaacttaactactccactaactacaattaataa 279  Q
    ||||||||||||||||    ||||||||||| |||||||||||||||||||    
T  15904751 tatttattgaatttcacttcacttaactacttcactaactacaattaataa 15904801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #90
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 311 - 373
Target Start/End: Complemental strand, 26256032 - 26255970
Alignment:
Q  311 attaaaatcaacacaattaatcatttccttaataattgtgcacaaatcttaaacgactaatat 373  Q
    ||||||||||||| ||||||||||||| | ||| || ||||| ||| ||||||||| ||||||    
T  26256032 attaaaatcaacataattaatcatttcataaatgatcgtgcataaaccttaaacgattaatat 26255970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #91
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 218 - 279
Target Start/End: Original strand, 52837269 - 52837330
Alignment:
Q  218 tattatactcttatttattgaatttcatcaaacttaactactccactaactacaattaataa 279  Q
    ||||||||  ||| ||||||||||||||  |  ||||||||||||||| |||||||||||||    
T  52837269 tattatacctttaattattgaatttcattcatattaactactccactagctacaattaataa 52837330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #92
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 301 - 337
Target Start/End: Original strand, 20356083 - 20356119
Alignment:
Q  301 taattttaccattaaaatcaacacaattaatcatttc 337  Q
    ||||||||||||||||||||||| |||| ||||||||    
T  20356083 taattttaccattaaaatcaacaaaatttatcatttc 20356119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #93
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 301 - 337
Target Start/End: Complemental strand, 20554823 - 20554787
Alignment:
Q  301 taattttaccattaaaatcaacacaattaatcatttc 337  Q
    ||||||||||||||||||||||| |||| ||||||||    
T  20554823 taattttaccattaaaatcaacaaaatttatcatttc 20554787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #94
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 215 - 267
Target Start/End: Complemental strand, 24500110 - 24500058
Alignment:
Q  215 cactattatactcttatttattgaatttcatcaaacttaactactccactaac 267  Q
    |||||||| ||  |||||| |||||||||||| ||||||||||||| ||||||    
T  24500110 cactattacaccattatttgttgaatttcatctaacttaactactcaactaac 24500058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #95
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 218 - 258
Target Start/End: Original strand, 35538644 - 35538684
Alignment:
Q  218 tattatactcttatttattgaatttcatcaaacttaactac 258  Q
    ||||||| | ||||||||||||||||||| |||||||||||    
T  35538644 tattataatattatttattgaatttcatctaacttaactac 35538684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #96
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 252 - 344
Target Start/End: Original strand, 49176940 - 49177032
Alignment:
Q  252 taactactccactaactacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaacacaattaatcatttccttaata 344  Q
    ||||||||| | |||||| |||||||||  |  ||||||||||||  ||  |||||||| || |||||||||  |||||| ||||||||||||    
T  49176940 taactactctattaactataattaataagagtattttagtaaatgacacatattttacctttgaaatcaacattattaattatttccttaata 49177032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 128; Significance: 5e-66; HSPs: 62)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 128; E-Value: 5e-66
Query Start/End: Original strand, 164 - 391
Target Start/End: Complemental strand, 40530403 - 40530175
Alignment:
Q  164 tcaaaataattgtcactttacaataccaatgcaatatttattannnnnnncc-actattatactcttatttattgaatttcatcaaacttaactactcca 262  Q
    |||||||||||||||||||||||||||||||||  ||||||||       || |||||||||| |||||||||| ||||||||| |||||||| ||||||    
T  40530403 tcaaaataattgtcactttacaataccaatgcagcatttattatttatttcccactattatacccttatttatttaatttcatccaacttaaccactcca 40530304  T
Q  263 ctaactacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaacacaattaatcatttccttaataattgtgcacaaatcttaa 362  Q
    ||||||||||||||||| || ||||||||||||| |||||||||||||||| |||||||||||||||||||||| ||||||||| ||||||| | |||||    
T  40530303 ctaactacaattaataagggtgttttagtaaatgctactaattttaccattgaaatcaacacaattaatcattttcttaataatcgtgcacagaccttaa 40530204  T
Q  363 acgactaatattgtttgacggaggtagta 391  Q
    ||||| ||||||||  |||||||| ||||    
T  40530203 acgacaaatattgtgagacggagggagta 40530175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 121; E-Value: 8e-62
Query Start/End: Original strand, 163 - 391
Target Start/End: Original strand, 4818484 - 4818713
Alignment:
Q  163 ctcaaaataattgtcactttacaataccaatgcaatatttattannnnnnncc-actattatactcttatttattgaatttcatcaaacttaactactcc 261  Q
    ||||||||||||||||||||| |||||||||| |  ||||||||       || |||||||||| |||||||||||||||||||| |||||||  |||||    
T  4818484 ctcaaaataattgtcactttataataccaatgtagcatttattatttttttcccactattatacccttatttattgaatttcatctaacttaatcactcc 4818583  T
Q  262 actaactacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaacacaattaatcatttccttaataattgtgcacaaatctta 361  Q
    |||||||||||||||||| || ||||||||||||| |||||||||||| ||| ||||||||||||||||| |||||||||||||| ||||||||| ||||    
T  4818584 actaactacaattaataagggtgttttagtaaatgctactaattttacaattgaaatcaacacaattaattatttccttaataatcgtgcacaaacctta 4818683  T
Q  362 aacgactaatattgtttgacggaggtagta 391  Q
    |||||| ||||||||  |||||||| ||||    
T  4818684 aacgacaaatattgtgagacggagggagta 4818713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 121; E-Value: 8e-62
Query Start/End: Original strand, 163 - 391
Target Start/End: Original strand, 8698242 - 8698471
Alignment:
Q  163 ctcaaaataattgtcactttacaataccaatgcaatatttattannnnnnn-ccactattatactcttatttattgaatttcatcaaacttaactactcc 261  Q
    |||||||||||||||||||||||||| ||||| | |||||||||        |||||||||||| |||||||||||||||||||| |||||||| |||||    
T  8698242 ctcaaaataattgtcactttacaatatcaatgtagtatttattattttttttccactattatacccttatttattgaatttcatccaacttaaccactcc 8698341  T
Q  262 actaactacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaacacaattaatcatttccttaataattgtgcacaaatctta 361  Q
    |||||||||||||||||| || ||||| |||||||  ||||||||||||||| ||||||||||||||||||||||| |||||||| ||||||||| ||||    
T  8698342 actaactacaattaataagggtgttttggtaaatgcaactaattttaccattgaaatcaacacaattaatcatttctttaataatcgtgcacaaacctta 8698441  T
Q  362 aacgactaatattgtttgacggaggtagta 391  Q
    ||| || ||||||||  |||||||| ||||    
T  8698442 aacaacaaatattgtgagacggagggagta 8698471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 163 - 374
Target Start/End: Original strand, 40899852 - 40900063
Alignment:
Q  163 ctcaaaataattgtcactttacaataccaatgcaatatttattannnnnnnccactattatactcttatttattgaatttcatcaaacttaactactcca 262  Q
    ||||||||||||||||||||| |||| || ||||  ||||||||       ||| |||||||| |||||||||||||||||||| |||||||||||||||    
T  40899852 ctcaaaataattgtcactttagaataacattgcagcatttattattattttccattattatacccttatttattgaatttcatctaacttaactactcca 40899951  T
Q  263 ctaactacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaacacaattaatcatttccttaataattgtgcacaaatcttaa 362  Q
    ||||||||||||||||| || ||||||||||||| |||||||||| |||| ||||||||||||||||||||||||||||||||  ||||| ||| |||||    
T  40899952 ctaactacaattaataagggtgttttagtaaatgatactaattttgccatcaaaatcaacacaattaatcatttccttaataaccgtgcataaaccttaa 40900051  T
Q  363 acgactaatatt 374  Q
    | ||||| ||||    
T  40900052 atgactattatt 40900063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 215 - 376
Target Start/End: Original strand, 29570378 - 29570539
Alignment:
Q  215 cactattatactcttatttattgaatttcatcaaacttaactactccactaactacaattaataatggagttttagtaaatgttactaattttaccatta 314  Q
    |||||||||||||||||||||||||||||||| |||||||||| |||| |||||||||||||||| || ||||||| ||||  || |||||||| |||||    
T  29570378 cactattatactcttatttattgaatttcatccaacttaactattccattaactacaattaataaaggtgttttagcaaatactaataattttaacatta 29570477  T
Q  315 aaatcaacacaattaatcatttccttaataattgtgcacaaatcttaaacgactaatattgt 376  Q
    ||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||    
T  29570478 aaatcaacacaattaatcatttctttaataatcgtgcacaaatcttaaacgactaatattgt 29570539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 163 - 376
Target Start/End: Original strand, 41496014 - 41496227
Alignment:
Q  163 ctcaaaataattgtcactttacaataccaatgcaatatttattannnnnnnccactattatactcttatttattgaatttcatcaaacttaactactcca 262  Q
    ||||||||||||||||||||||||||| ||||||| ||||||||       ||||||||||||  |||||||||| |||||||| || ||||||||||||    
T  41496014 ctcaaaataattgtcactttacaatactaatgcaacatttattattcttttccactattatacctttatttattgcatttcatccaatttaactactcca 41496113  T
Q  263 ctaactacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaacacaattaatcatttccttaataattgtgcacaaatcttaa 362  Q
    |||||||||||||||||||  |||||| ||||||  ||||||||||||||| ||||||||||||||||| ||||  |||||||| ||| ||||| |||||    
T  41496114 ctaactacaattaataatgatgttttactaaatgcaactaattttaccattgaaatcaacacaattaattatttttttaataatcgtgtacaaaccttaa 41496213  T
Q  363 acgactaatattgt 376  Q
     |||||||||||||    
T  41496214 tcgactaatattgt 41496227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 163 - 367
Target Start/End: Original strand, 27542729 - 27542933
Alignment:
Q  163 ctcaaaataattgtcactttacaataccaatgcaatatttattannnnnnnccactattatactcttatttattgaatttcatcaaacttaactactcca 262  Q
    |||||||||||||| |||||| ||||| ||||||  || |||||       ||| ||||||||||||||||||||||||| ||| |||||||||||||||    
T  27542729 ctcaaaataattgtgactttagaatactaatgcagcatgtattacttttttccattattatactcttatttattgaattttatccaacttaactactcca 27542828  T
Q  263 ctaactacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaacacaattaatcatttccttaataattgtgcacaaatcttaa 362  Q
    |||||||||||||||||  |  |||||||||||| || ||||||||||||| ||||||||||||| |||||||||||||||||| ||||||||| |||||    
T  27542829 ctaactacaattaataagagtattttagtaaatggtattaattttaccattgaaatcaacacaatcaatcatttccttaataatcgtgcacaaaccttaa 27542928  T
Q  363 acgac 367  Q
    |||||    
T  27542929 acgac 27542933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 163 - 369
Target Start/End: Complemental strand, 6315956 - 6315750
Alignment:
Q  163 ctcaaaataattgtcactttacaataccaatgcaatatttattannnnnnnccactattatactcttatttattgaatttcatcaaacttaactactcca 262  Q
    ||||||||||||||||||||| ||||||||||||| ||||||||       ||| |||||||| |||||||||||||||||||| |||||||||||| ||    
T  6315956 ctcaaaataattgtcactttagaataccaatgcaacatttattattattttccattattatacccttatttattgaatttcatccaacttaactacttca 6315857  T
Q  263 ctaactacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaacacaattaatcatttccttaataattgtgcacaaatcttaa 362  Q
    ||||||||||||||||| ||  |||||||||||| || |||||||| |||| |||| |||||||| |||||||||||||||||| | | ||||  |||||    
T  6315856 ctaactacaattaataagggtattttagtaaatgatattaattttatcattgaaattaacacaatcaatcatttccttaataatcgagtacaacccttaa 6315757  T
Q  363 acgacta 369  Q
    |||||||    
T  6315756 acgacta 6315750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 164 - 369
Target Start/End: Complemental strand, 6753836 - 6753632
Alignment:
Q  164 tcaaaataattgtcactttacaataccaatgcaatatttattannnnnnnccactattatactcttatttattgaatttcatcaaacttaactactccac 263  Q
    ||||||||||| |||||||| ||||||||||||| ||||||||       ||| |||||||| |||||||||| ||||||||| ||||||||||||||||    
T  6753836 tcaaaataattatcactttagaataccaatgcaacatttattatctttttccattattatacccttatttattaaatttcatccaacttaactactccac 6753737  T
Q  264 taactacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaacacaattaatcatttccttaataattgtgcacaaatcttaaa 363  Q
    |||||||||||||||| ||  |||||||||||| |||||||||||||||| |||| || | |||||||||||| ||||||||| ||||| ||| ||||||    
T  6753736 taactacaattaataagggtattttagtaaatgatactaattttaccattgaaattaata-aattaatcattttcttaataatcgtgcataaaccttaaa 6753638  T
Q  364 cgacta 369  Q
    ||||||    
T  6753637 cgacta 6753632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 163 - 372
Target Start/End: Complemental strand, 15818661 - 15818450
Alignment:
Q  163 ctcaaaataattgtcactttacaataccaatgcaatatttattannnnnnnccactattatactcttatttattgaatttcatcaaacttaactactcca 262  Q
    |||||||||| |||||||||||||||||||||||| ||| ||||       |||||||||| |  ||||||||| ||||||||| || ||||||||||||    
T  15818661 ctcaaaataactgtcactttacaataccaatgcaacattaattacttgtttccactattatgcctttatttattaaatttcatccaatttaactactcca 15818562  T
Q  263 ctaactacaattaataatggagttttagtaaatgt--tactaattttaccattaaaatcaacacaattaatcatttccttaataattgtgcacaaatctt 360  Q
    || | |||||||||||| || |||||||||||| |  |||||||||||||||| |||||||||||||||| ||||||||||||||| ||||| ||| |||    
T  15818561 ctgattacaattaataaaggtgttttagtaaatatgctactaattttaccattgaaatcaacacaattaaacatttccttaataatcgtgcataaacctt 15818462  T
Q  361 aaacgactaata 372  Q
    ||||||||||||    
T  15818461 aaacgactaata 15818450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 163 - 369
Target Start/End: Complemental strand, 1248783 - 1248577
Alignment:
Q  163 ctcaaaataattgtcactttacaataccaatgcaatatttattannnnnnnccactattatactcttatttattgaatttcatcaaacttaactactcca 262  Q
    ||||||||||||||||||||| |||| |||||||| ||||||||        || |||||||| |||||| ||||||||| ||  |||||||||||| ||    
T  1248783 ctcaaaataattgtcactttagaatatcaatgcaacatttattattatttttcattattatacccttattaattgaattttattcaacttaactacttca 1248684  T
Q  263 ctaactacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaacacaattaatcatttccttaataattgtgcacaaatcttaa 362  Q
    ||||||||||||||||| ||  |||||||||||| || ||||||||||||| ||||||||| ||||||| |||||||||||||  |||||||||||||||    
T  1248683 ctaactacaattaataagggtattttagtaaatgatattaattttaccattgaaatcaacataattaataatttccttaataaccgtgcacaaatcttaa 1248584  T
Q  363 acgacta 369  Q
    |||||||    
T  1248583 acgacta 1248577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 164 - 376
Target Start/End: Original strand, 31654987 - 31655200
Alignment:
Q  164 tcaaaataattgtcactttacaa-taccaatgcaatatttattannnnnnnccactattatactcttatttattgaatttcatcaaacttaactactcca 262  Q
    |||||||||||||||||||| || ||||||| ||||| ||||||       |||||||||||| |||||||||||||||||||  ||| ||| |||||||    
T  31654987 tcaaaataattgtcactttaaaaataccaatacaataattattatttatttccactattatacccttatttattgaatttcattcaacataattactcca 31655086  T
Q  263 ctaactacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaacacaattaatcatttccttaataattgtgcacaaatcttaa 362  Q
    ||||||||||||||||| |   || ||||||||| || ||||||||||||| ||||||||||||||||||||||| |||||||| || ||||||  ||||    
T  31655087 ctaactacaattaataaggatattatagtaaatgatattaattttaccattgaaatcaacacaattaatcatttctttaataatcgtacacaaactttaa 31655186  T
Q  363 acgactaatattgt 376  Q
    ||||||||||||||    
T  31655187 acgactaatattgt 31655200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 165 - 361
Target Start/End: Original strand, 19929882 - 19930078
Alignment:
Q  165 caaaataattgtcactttacaataccaatgcaatatttattannnnnnnccactattatactcttatttattgaatttcatcaaacttaactactccact 264  Q
    ||||||||||||||||||| ||||||||||||| ||||||||       ||| |||||||| |||||||||||||||||||| |||||||||| | ||||    
T  19929882 caaaataattgtcactttagaataccaatgcaacatttattattattttccattattatacccttatttattgaatttcatccaacttaactatttcact 19929981  T
Q  265 aactacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaacacaattaatcatttccttaataattgtgcacaaatctta 361  Q
    ||||||||||||||| |  |||||||||||||   ||| ||||||||| |||||||||| |||||||||||| ||||||||| ||||| ||||||||    
T  19929982 aactacaattaataaggatgttttagtaaatgacgctagttttaccatcaaaatcaacaaaattaatcattttcttaataatcgtgcataaatctta 19930078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 218 - 364
Target Start/End: Complemental strand, 8725133 - 8724987
Alignment:
Q  218 tattatactcttatttattgaatttcatcaaacttaactactccactaactacaattaataatggagttttagtaaatgttactaattttaccattaaaa 317  Q
    ||||||||| ||||||||||||||||||  || |||||||||||||||||||||||||||||  | ||||||||||||| || ||||||||||||| |||    
T  8725133 tattatactattatttattgaatttcattcaagttaactactccactaactacaattaataagtgtgttttagtaaatgatattaattttaccattgaaa 8725034  T
Q  318 tcaacacaattaatcatttccttaataattgtgcacaaatcttaaac 364  Q
    |||||||||||||||||||| |||||||| ||||||||| |||||||    
T  8725033 tcaacacaattaatcatttctttaataatcgtgcacaaaccttaaac 8724987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 163 - 356
Target Start/End: Complemental strand, 6616059 - 6615866
Alignment:
Q  163 ctcaaaataattgtcactttacaataccaatgcaatatttattannnnnnn-ccactattatactcttatttattgaatttcatcaaacttaactactcc 261  Q
    |||||||||||||||||||||||||||| |||||| ||||||||        |||||||||||| ||||||||||||||| |||| |||||||| |||||    
T  6616059 ctcaaaataattgtcactttacaatacctatgcaacatttattattttttttccactattatacccttatttattgaatt-catccaacttaaccactcc 6615961  T
Q  262 actaactacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaacacaattaatcatttccttaataattgtgcacaaa 356  Q
    |||||||| ||||||||| |  ||||| ||||||| |||||||||||||||| ||||||||||||||||| ||||  |||||||| |||||||||    
T  6615960 actaactaaaattaataaggatgttttggtaaatgctactaattttaccattgaaatcaacacaattaattatttatttaataatcgtgcacaaa 6615866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 164 - 386
Target Start/End: Original strand, 9515668 - 9515903
Alignment:
Q  164 tcaaaataattgtcactttacaataccaatgcaatatttattannnnnnn---ccactattatactcttatttattgaatttcatcaaacttaactactc 260  Q
    |||||||||||||||||||||||||| ||||||  ||||||||          ||||||||||||||||||||| ||||||||||  |||||||||||||    
T  9515668 tcaaaataattgtcactttacaatactaatgcatcatttattattattattttccactattatactcttatttaatgaatttcattcaacttaactactc 9515767  T
Q  261 cactaactacaat----------taataatggagttttagtaaatgttactaattttaccattaaaatcaacacaattaatcatttccttaataattgtg 350  Q
    |||||||||| ||          |||||| |  ||||||||||||| |||||||||||||||| |||||||||||||||||||||  ||||||||| |||    
T  9515768 cactaactactatgacctactattaataaggatgttttagtaaatgatactaattttaccattgaaatcaacacaattaatcattatcttaataatcgtg 9515867  T
Q  351 cacaaatcttaaacgactaatattgtttgacggagg 386  Q
    |||||| |||||||||||||||||||  ||||||||    
T  9515868 cacaaaccttaaacgactaatattgtgagacggagg 9515903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 166 - 366
Target Start/End: Complemental strand, 7828102 - 7827902
Alignment:
Q  166 aaaataattgtcactttacaataccaatgcaatatttattannnnnnnccactattatactcttatttattgaatttcatcaaacttaactactccacta 265  Q
    |||| |||| ||| |||| |||| |||||||||||||||||        || |||||||  |||||||||| ||||||||| ||||||||||||||||||    
T  7828102 aaaaaaattatcattttaaaatatcaatgcaatatttattatcttttttcattattatatccttatttattaaatttcatccaacttaactactccacta 7828003  T
Q  266 actacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaacacaattaatcatttccttaataattgtgcacaaatcttaaacg 365  Q
    |||||||||||||| ||  ||||| |||||| |||||||||||||||| ||||||||||||||||| |||| ||||||||| ||| ||||| ||||||||    
T  7828002 actacaattaataagggtattttaataaatgatactaattttaccattgaaatcaacacaattaattattttcttaataatcgtgtacaaaccttaaacg 7827903  T
Q  366 a 366  Q
    |    
T  7827902 a 7827902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 163 - 364
Target Start/End: Complemental strand, 42803799 - 42803598
Alignment:
Q  163 ctcaaaataattgtcactttacaataccaatgcaatatttattannnnnnnccactattatactcttatttattgaatttcatcaaacttaactactcca 262  Q
    |||||||||||||||| |||||| ||| ||||||  ||||||||         | ||||||||||||||||||||||||||||| |||||||| ||||||    
T  42803799 ctcaaaataattgtcattttacagtactaatgcatcatttattattttcttttaatattatactcttatttattgaatttcatccaacttaaccactcca 42803700  T
Q  263 ctaactacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaacacaattaatcatttccttaataattgtgcacaaatcttaa 362  Q
     ||||||||||||||||||| ||||||||||||  |||||||||||| ||| |||| |||||||||||| ||||| || ||||| ||||| ||| |||||    
T  42803699 ttaactacaattaataatggtgttttagtaaatactactaattttacaattgaaatgaacacaattaattatttctttgataatcgtgcataaaccttaa 42803600  T
Q  363 ac 364  Q
    ||    
T  42803599 ac 42803598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 167 - 374
Target Start/End: Original strand, 21060569 - 21060775
Alignment:
Q  167 aaataattgtcactttacaataccaatgcaatatttattannnnnnnccactattatactcttatttattgaatttcatcaaacttaactactccactaa 266  Q
    ||||||||||||||||| |||| |||||||  |||||||        ||| ||||||||  ||||||||||||||| ||| |||||||||||||||||||    
T  21060569 aaataattgtcactttagaatatcaatgcatcatttatt-ttattttccattattataccattatttattgaattttatccaacttaactactccactaa 21060667  T
Q  267 ctacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaacacaattaatcatttccttaataattgtgcacaaatcttaaacga 366  Q
    |||||||||||||  |  |||||||||||  ||||||||||||||| ||||| ||||||||||||||||||| ||||||  ||||| ||| |||||||||    
T  21060668 ctacaattaataagagtattttagtaaataatactaattttaccatcaaaataaacacaattaatcatttccctaataaccgtgcataaaccttaaacga 21060767  T
Q  367 ctaatatt 374  Q
    ||| ||||    
T  21060768 ctattatt 21060775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 216 - 369
Target Start/End: Complemental strand, 2232195 - 2232046
Alignment:
Q  216 actattatactcttatttattgaatttcatcaaacttaactactccactaactacaattaataatggagttttagtaaatgttactaattttaccattaa 315  Q
    |||||||||| |||||||||||||||||||| |||||||||||||||||||    |||||||||  |  ||||| |||||| |||||||||||||||| |    
T  2232195 actattatacccttatttattgaatttcatccaacttaactactccactaa----aattaataagagttttttaataaatgctactaattttaccattga 2232100  T
Q  316 aatcaacacaattaatcatttccttaataattgtgcacaaatcttaaacgacta 369  Q
    |||||||||||||| |||||| ||||||||| ||||||||| ||||||||||||    
T  2232099 aatcaacacaattattcattttcttaataatcgtgcacaaaccttaaacgacta 2232046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 163 - 361
Target Start/End: Original strand, 6753963 - 6754160
Alignment:
Q  163 ctcaaaataattgtcactttacaataccaatgcaatatttattannnnnnnccactattatactcttatttattgaatttcatcaaacttaactactcca 262  Q
    ||||||||||||||||||||| ||||||||||||| |||| ||        |||  | ||||| |||||||||||||||||||| |||||||||||||||    
T  6753963 ctcaaaataattgtcactttataataccaatgcaacattttttttttttttccatcaatatacccttatttattgaatttcatccaacttaactactcca 6754062  T
Q  263 ctaactacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaacacaattaatcatttccttaataattgtgcacaaatctta 361  Q
    |||||||||||||||||  | |||||||||||||  | ||||||||| ||| ||||||||| |||||||||||| |||| |||| ||||| ||| ||||    
T  6754063 ctaactacaattaataagagtgttttagtaaatgacattaattttactattgaaatcaaca-aattaatcattttcttattaatagtgcataaacctta 6754160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 215 - 376
Target Start/End: Complemental strand, 22848511 - 22848350
Alignment:
Q  215 cactattatactcttatttattgaatttcatcaaacttaactactccactaactacaattaataatggagttttagtaaatgttactaattttaccatta 314  Q
    ||||||||||| |||||||||||||||||||| ||  ||||||||||| |||||||||||||||| || |||||| |||||  || ||||||||| |||     
T  22848511 cactattatacccttatttattgaatttcatccaatctaactactccattaactacaattaataagggtgttttaataaatactattaattttactattg 22848412  T
Q  315 aaatcaacacaattaatcatttccttaataattgtgcacaaatcttaaacgactaatattgt 376  Q
    ||||||||||||||||||  ||||||||||||  || ||||  |||||||||||||||||||    
T  22848411 aaatcaacacaattaatcgcttccttaataatcttgtacaagccttaaacgactaatattgt 22848350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 163 - 363
Target Start/End: Original strand, 27580540 - 27580735
Alignment:
Q  163 ctcaaaataattgtcactttacaataccaatgcaatatttattannnnnnnccactattatactcttatttattgaatttcatcaaacttaactactcca 262  Q
    |||||||||||||||||||||||  |||||||||| |||| ||        ||| ||||||||  ||||||| | ||||||||  |||||||||||||||    
T  27580540 ctcaaaataattgtcactttacataaccaatgcaacatttttt------tcccattattatacatttatttaattaatttcattcaacttaactactcca 27580633  T
Q  263 ctaactacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaacacaattaatcatttccttaa-taattgtgcacaaatctta 361  Q
    ||||||||||||||||| ||  |||||||||||| || ||||||||||||| ||||||||||||||||||||||||| || |||| ||||| ||| ||||    
T  27580634 ctaactacaattaataagggtattttagtaaatgatattaattttaccattgaaatcaacacaattaatcatttcctaaattaatcgtgcagaaacctta 27580733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 215 - 376
Target Start/End: Original strand, 29374328 - 29374489
Alignment:
Q  215 cactattatactcttatttattgaatttcatcaaacttaactactccactaactacaattaataatggagttttagtaaatgttactaattttaccatta 314  Q
    ||||||||||| |||||||||||||||| ||  || ||||||||||||||||||||||||||||| ||  |||||||||||| || |||||||| ||||     
T  29374328 cactattatacccttatttattgaattttattcaatttaactactccactaactacaattaataaaggtcttttagtaaatgctattaattttatcattg 29374427  T
Q  315 aaatcaacacaattaatcatttccttaataattgtgcacaaatcttaaacgactaatattgt 376  Q
    ||||||||| |||||||||||| ||||||||   |  | ||| |||||||||||||||||||    
T  29374428 aaatcaacataattaatcattttcttaataaccttaaataaaccttaaacgactaatattgt 29374489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 214 - 374
Target Start/End: Complemental strand, 11796295 - 11796135
Alignment:
Q  214 ccactattatactcttatttattgaatttcatcaaacttaactactccactaactacaattaataatggagttttagtaaatgttactaattttaccatt 313  Q
    |||||| |||||||||||||||| ||||||||| |||||||||||| ||||||||||||||||||||    |||||||||||  || |||||||| ||||    
T  11796295 ccactagtatactcttatttattaaatttcatctaacttaactactacactaactacaattaataataatattttagtaaataatattaattttatcatt 11796196  T
Q  314 aaaatcaacacaattaatcatttccttaataattgtgcacaaatcttaaacgactaatatt 374  Q
    ||||||||||||||||| ||||| ||| |  ||||||| |||| ||||||| |||| ||||    
T  11796195 aaaatcaacacaattaaccattttctttaacattgtgcgcaaaccttaaaccactattatt 11796135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 217 - 374
Target Start/End: Original strand, 41492290 - 41492447
Alignment:
Q  217 ctattatactcttatttattgaatttcatcaaacttaactactccactaactacaattaataatggag-ttttagtaaatgttactaattttaccattaa 315  Q
    ||||||||| |||||||||||||||||||| |||||||||| |||| |||||||| |||| || |||  ||||||||||||| ||||||||||||||| |    
T  41492290 ctattatacccttatttattgaatttcatctaacttaacta-tccattaactacatttaacaagggatattttagtaaatgtcactaattttaccattga 41492388  T
Q  316 aatcaacacaattaatcatttccttaataattgtgcacaaatcttaaacgactaatatt 374  Q
    ||| | ||||||||||||||| ||||| ||| | ||||||| |||| ||||||| ||||    
T  41492389 aataagcacaattaatcattttcttaaaaatcgcgcacaaaccttagacgactattatt 41492447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 163 - 374
Target Start/End: Complemental strand, 2588242 - 2588036
Alignment:
Q  163 ctcaaaataattgtcactttacaataccaatgcaatatttattannnnnnnccactattatactcttatttattgaatttcatcaaacttaactactcca 262  Q
    ||||||||||||||||||||| |||| |||||||  |||||||         || ||| |||| ||||||||||||| || ||| || ||||||||| ||    
T  2588242 ctcaaaataattgtcactttagaatatcaatgcagcatttattttattttttcattataatacccttatttattgaactttatccaatttaactactgca 2588143  T
Q  263 c--taactacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaacacaattaatcatttccttaataattgtgcacaaatctt 360  Q
    |  |||||||||||||||| || |||||||||       ||||||||||||| |||||||||||||||||||||||||||||||| ||||||  || |||    
T  2588142 cactaactacaattaataagggtgttttagta-------ctaattttaccatcaaaatcaacacaattaatcatttccttaataactgtgcatcaacctt 2588050  T
Q  361 aaacgactaatatt 374  Q
    ||||||||| ||||    
T  2588049 aaacgactattatt 2588036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 217 - 374
Target Start/End: Original strand, 41478815 - 41478972
Alignment:
Q  217 ctattatactcttatttattgaatttcatcaaacttaactactccactaactacaattaataatggag-ttttagtaaatgttactaattttaccattaa 315  Q
    ||||||||| |||||||||||||||||||| |||||||||| |||| ||||| ||||||| || |||  ||||||||||||  ||||||||||||||| |    
T  41478815 ctattatacccttatttattgaatttcatctaacttaacta-tccattaactgcaattaacaagggatattttagtaaatgacactaattttaccattga 41478913  T
Q  316 aatcaacacaattaatcatttccttaataattgtgcacaaatcttaaacgactaatatt 374  Q
    ||| | ||||||||||||||| ||||| ||| | ||||||| |||| ||||||| ||||    
T  41478914 aataagcacaattaatcattttcttaaaaatcgcgcacaaaccttagacgactattatt 41478972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 216 - 336
Target Start/End: Original strand, 4441008 - 4441128
Alignment:
Q  216 actattatactcttatttattgaatttcatcaaacttaactactccactaactacaattaataatggagttttagtaaatgttactaattttaccattaa 315  Q
    ||||||||||  ||||||||||||||||||| || |||||||||||||||||||||||||||||     |||||||||||  || |||||||| ||||||    
T  4441008 actattataccgttatttattgaatttcatccaatttaactactccactaactacaattaataaaaatattttagtaaataatattaattttatcattaa 4441107  T
Q  316 aatcaacacaattaatcattt 336  Q
    |||||||||||||||| ||||    
T  4441108 aatcaacacaattaattattt 4441128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 218 - 362
Target Start/End: Complemental strand, 15439442 - 15439299
Alignment:
Q  218 tattatactcttatttattgaatttcatcaaacttaactactccactaactacaattaataatggagttttagtaaatgttactaattttaccattaaaa 317  Q
    |||||||| |||||||||| ||||  |||||||||||||||| | |||| ||||||||||||  |  |||||||||||| |||||||||||||||| |||    
T  15439442 tattatacccttatttattaaatta-atcaaacttaactactactctaaatacaattaataaaagtattttagtaaatgatactaattttaccattgaaa 15439344  T
Q  318 tcaacacaattaatcatttccttaataattgtgcacaaatcttaa 362  Q
    | || ||||||||||||||||||||  || ||||||||| |||||    
T  15439343 ttaatacaattaatcatttccttaaatatcgtgcacaaaacttaa 15439299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 163 - 341
Target Start/End: Complemental strand, 41062338 - 41062161
Alignment:
Q  163 ctcaaaataattgtcactttacaataccaatgcaatatttattannnnnnnccactattatactcttatttattgaatttcatcaaacttaactactcca 262  Q
    |||||||||||| | |||||| ||||||||||||| ||||||||       ||| ||| |||| ||||||||||||| | |||| | ||||| || || |    
T  41062338 ctcaaaataattataactttagaataccaatgcaacatttattatttttt-ccattataatacccttatttattgaactccatccagcttaattattcta 41062240  T
Q  263 ctaactacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaacacaattaatcatttcctta 341  Q
    ||||||||||||||||| || ||||||||||||| ||||||||||| ||| |||||||||| ||||||| |||| ||||    
T  41062239 ctaactacaattaataagggtgttttagtaaatgatactaattttatcatcaaaatcaacataattaattattttctta 41062161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 163 - 345
Target Start/End: Complemental strand, 3348309 - 3348122
Alignment:
Q  163 ctcaaaataattgtcactttacaataccaatgcaatatttattannnnnnnccactattatactcttatttattgaatttcatcaaacttaactactcca 262  Q
    |||||||||||||||| |||| ||||||||||||  ||||||||       ||| ||| |||  ||||||||||||| |||||| ||||||| |||| ||    
T  3348309 ctcaaaataattgtcattttagaataccaatgcagcatttattatttttttccattataatatccttatttattgaacttcatccaacttaattacttca 3348210  T
Q  263 ctaactacaattaataatggagttttagtaaat-----gttactaattttaccattaaaatcaacacaattaatcatttccttaataa 345  Q
    | ||||||| ||||||| || |||||| |||||     | ||||||||||||||| |||||||||| ||||||| |||||||||||||    
T  3348209 ccaactacatttaataagggtgttttaataaataatggggtactaattttaccatcaaaatcaacataattaataatttccttaataa 3348122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 248 - 366
Target Start/End: Original strand, 29856066 - 29856182
Alignment:
Q  248 aacttaactactccactaactacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaacacaattaatcatttccttaataatt 347  Q
    ||||||||||||||||||||||||||||||||  |  |||||| || || || |||||||| |||| |||||||| |||||  | ||||||||||||||     
T  29856066 aacttaactactccactaactacaattaataagagtattttagcaagtgatattaattttatcattgaaatcaacgcaatt--ttatttccttaataatc 29856163  T
Q  348 gtgcacaaatcttaaacga 366  Q
    |||||||||||||||||||    
T  29856164 gtgcacaaatcttaaacga 29856182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 227 - 369
Target Start/End: Complemental strand, 30512801 - 30512658
Alignment:
Q  227 cttatttattgaatttcatcaaacttaactactccactaactacaa-ttaataatggagttttagtaaatgttactaattttaccattaaaatcaacaca 325  Q
    |||||||||| ||||||||| |||||||||| | |||||||||||  |||||||  |  | |||||||||| |  ||||||||||||| ||||||| |||    
T  30512801 cttatttattaaatttcatccaacttaactatttcactaactacatgttaataagagtatcttagtaaatgatgttaattttaccattgaaatcaataca 30512702  T
Q  326 attaatcatttccttaataattgtgcacaaatcttaaacgacta 369  Q
    ||||||||||||||||||||| ||||| |||  ||| |||||||    
T  30512701 attaatcatttccttaataatcgtgcataaactttatacgacta 30512658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 227 - 369
Target Start/End: Complemental strand, 30553141 - 30552998
Alignment:
Q  227 cttatttattgaatttcatcaaacttaactactccactaactacaa-ttaataatggagttttagtaaatgttactaattttaccattaaaatcaacaca 325  Q
    |||||||||| ||||||||| |||||||||| | |||||||||||  |||||||  |  | |||||||||| |  ||||||||||||| ||||||| |||    
T  30553141 cttatttattaaatttcatccaacttaactatttcactaactacatgttaataagagtatcttagtaaatgatgttaattttaccattgaaatcaataca 30553042  T
Q  326 attaatcatttccttaataattgtgcacaaatcttaaacgacta 369  Q
    ||||||||||||||||||||| ||||| |||  ||| |||||||    
T  30553041 attaatcatttccttaataatcgtgcataaactttatacgacta 30552998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 228 - 363
Target Start/End: Complemental strand, 37184193 - 37184058
Alignment:
Q  228 ttatttattgaatttcatcaaacttaactactccactaactacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaacacaat 327  Q
    |||||||||||||||||||||||||||  | || | |||||||||| ||||| |   |||||||||||| || ||||||||||||| |||||||| ||||    
T  37184193 ttatttattgaatttcatcaaacttaatcagtctattaactacaatgaataaagatattttagtaaatgatattaattttaccattgaaatcaactcaat 37184094  T
Q  328 taatcatttccttaataattgtgcacaaatcttaaa 363  Q
    |||||||||  |||| |||  |||||||| ||||||    
T  37184093 taatcatttttttaaaaatcttgcacaaaacttaaa 37184058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 263 - 374
Target Start/End: Complemental strand, 38508266 - 38508155
Alignment:
Q  263 ctaactacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaacacaattaatcatttccttaataattgtgcacaaatcttaa 362  Q
    |||||||||||||||||  |  ||||| | | || |||||||||||||||| |||| ||||||||||||||||| ||||| ||| | |||||||||||||    
T  38508266 ctaactacaattaataagagtattttaatgagtgatactaattttaccattgaaattaacacaattaatcattttcttaaaaatcgagcacaaatcttaa 38508167  T
Q  363 acgactaatatt 374  Q
    ||||||| ||||    
T  38508166 acgactattatt 38508155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 228 - 353
Target Start/End: Original strand, 18841478 - 18841603
Alignment:
Q  228 ttatttattgaatttcatcaaacttaactactccactaactacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaacacaat 327  Q
    ||||||||||||||||| | || |||| || | ||||||||||||||||||| ||  ||||| |||||| || ||||||||||||| ||||||| | |||    
T  18841478 ttatttattgaatttcacccaatttaattatttcactaactacaattaataacggtattttattaaatgatattaattttaccatttaaatcaatataat 18841577  T
Q  328 taatcatttccttaataattgtgcac 353  Q
    |||||||||  |||| |||| |||||    
T  18841578 taatcatttttttaaaaattttgcac 18841603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 262 - 391
Target Start/End: Original strand, 32440174 - 32440303
Alignment:
Q  262 actaactacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaacacaattaatcatttccttaataattgtgcacaaatctta 361  Q
    ||||| |||||||||||| ||  |||||||||||| || |||||||| |||| |||| |||||||||||||||||| |||| |||  |||||||| |||     
T  32440174 actaagtacaattaataagggtattttagtaaatgatattaattttatcattgaaattaacacaattaatcatttctttaaaaatcatgcacaaaccttt 32440273  T
Q  362 aacgactaatattgtttgacggaggtagta 391  Q
    |||||||| |||| |  |||||||| ||||    
T  32440274 aacgactattattttgagacggagggagta 32440303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 214 - 328
Target Start/End: Complemental strand, 11761426 - 11761313
Alignment:
Q  214 ccactattatactcttatttattgaatttcatcaaacttaactactccactaactacaattaataatggagttttagtaaatgttactaattttaccatt 313  Q
    |||||||||||| ||||||||||||||| || | |||||||||| | |||| | || |||| ||||  |  ||||||||| || ||||||||||||||||    
T  11761426 ccactattatacgcttatttattgaattccaaccaacttaactatttcacttagtataatttataagagtattttagtaa-tgatactaattttaccatt 11761328  T
Q  314 aaaatcaacacaatt 328  Q
    |||||||||||||||    
T  11761327 aaaatcaacacaatt 11761313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 214 - 369
Target Start/End: Original strand, 11904190 - 11904346
Alignment:
Q  214 ccactattatactcttatttattgaatttcatcaaacttaactactccactaactacaatt-aataatggagttttagtaaatgttactaattttaccat 312  Q
    |||||||||||  |||| ||||||| ||| ||| || ||||||||||||| |||||||||| |||||  |  |||||||||||| || ||||||||  ||    
T  11904190 ccactattatagccttaattattgatttttatcgaatttaactactccaccaactacaattaaataagagtattttagtaaatgatattaattttattat 11904289  T
Q  313 taaaatcaacacaattaatcatttccttaataattgtgcacaaatcttaaacgacta 369  Q
    | || |||| ||||||||||| || |||||  || |||||||||  |||||||||||    
T  11904290 tgaactcaatacaattaatcactttcttaaagatcgtgcacaaacattaaacgacta 11904346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 228 - 336
Target Start/End: Complemental strand, 26285592 - 26285484
Alignment:
Q  228 ttatttattgaatttcatcaaacttaactactccactaactacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaacacaat 327  Q
    ||||||||||||||| ||  |||||||||||| || |||||||||||||||   | |||||  |||||| ||||||||||||| ||||||||||  |||     
T  26285592 ttatttattgaattttatacaacttaactacttcattaactacaattaatacgtgtgttttcataaatgatactaattttaccgttaaaatcaagtcaac 26285493  T
Q  328 taatcattt 336  Q
    |||||||||    
T  26285492 taatcattt 26285484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 301 - 391
Target Start/End: Original strand, 843509 - 843599
Alignment:
Q  301 taattttaccattaaaatcaacacaattaatcatttccttaataattgtgcacaaatcttaaacgactaatattgtttgacggaggtagta 391  Q
    |||||||| |||| ||||||||| |||||||||||| ||||||||| ||||||||| ||||||| | || ||||||  |||||||| ||||    
T  843509 taattttatcattgaaatcaacaaaattaatcattttcttaataatcgtgcacaaaccttaaacaattattattgtgagacggagggagta 843599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 316 - 386
Target Start/End: Original strand, 31747969 - 31748039
Alignment:
Q  316 aatcaacacaattaatcatttccttaataattgtgcacaaatcttaaacgactaatattgtttgacggagg 386  Q
    |||||||||||||||||||||||||||||||   ||| ||||||||||||| |||||||||  ||||||||    
T  31747969 aatcaacacaattaatcatttccttaataatgacgcataaatcttaaacgaataatattgtgagacggagg 31748039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 228 - 369
Target Start/End: Original strand, 39325862 - 39326001
Alignment:
Q  228 ttatttattgaatttcatcaaacttaactactccactaactacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaacacaat 327  Q
    ||||||||||||||| ||| |||||||||||||||||||||| |  |||||| ||  | |||||||||   | |||  |||||||||||| ||||| |||    
T  39325862 ttatttattgaatttaatccaacttaactactccactaactatatgtaataaaggtatcttagtaaattacattaa--ttaccattaaaaacaacataat 39325959  T
Q  328 taatcatttccttaataattgtgcacaaatcttaaacgacta 369  Q
    |||||||||    || | ||||||||||| ||||||||||||    
T  39325960 taatcattttaaaaaaatttgtgcacaaaccttaaacgacta 39326001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 315 - 369
Target Start/End: Complemental strand, 42922894 - 42922840
Alignment:
Q  315 aaatcaacacaattaatcatttccttaataattgtgcacaaatcttaaacgacta 369  Q
    |||||||||||||||||||||| |||||||||  |||||||||||||||||||||    
T  42922894 aaatcaacacaattaatcattttcttaataatcatgcacaaatcttaaacgacta 42922840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 241 - 374
Target Start/End: Original strand, 5282354 - 5282487
Alignment:
Q  241 ttcatcaaacttaactactccactaactacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaacacaattaatcatttcctt 340  Q
    |||||||||||||||| ||  ||||| || ||||||||| | | |||||||||||  || | |||||| ||||||||| | ||||||||||||||| |||    
T  5282354 ttcatcaaacttaacttcttaactaattataattaataaagaaattttagtaaattatatttattttatcattaaaattagcacaattaatcattttctt 5282453  T
Q  341 aataattgtgcacaaatcttaaacgactaatatt 374  Q
    || || ||| || ||| ||||||| |||| ||||    
T  5282454 aaaaactgtacagaaaccttaaacaactattatt 5282487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 239 - 369
Target Start/End: Complemental strand, 38161515 - 38161389
Alignment:
Q  239 atttcatcaaacttaactactccactaactacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaacacaattaatcatttcc 338  Q
    |||||||| ||||||||||||||||||||||| |||||||| |   |||||||||||| ||  ||||||||||||      |||||||||||||||||      
T  38161515 atttcatccaacttaactactccactaactacgattaataaggatattttagtaaatgatatgaattttaccatt----ggaacacaattaatcatttat 38161420  T
Q  339 ttaataattgtgcacaaatcttaaacgacta 369  Q
    |||| |||| |||  ||| ||||||||||||    
T  38161419 ttaaaaattatgctgaaaccttaaacgacta 38161389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 261 - 346
Target Start/End: Original strand, 5731808 - 5731893
Alignment:
Q  261 cactaactacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaacacaattaatcatttccttaataat 346  Q
    |||||||||| |||||||| |  ||||||||||||| |||  |||||   |||||||| ||||||||||||||||| |||||||||    
T  5731808 cactaactacgattaataaggatgttttagtaaatgatacacattttgttattaaaatgaacacaattaatcattttcttaataat 5731893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 218 - 273
Target Start/End: Complemental strand, 37101329 - 37101274
Alignment:
Q  218 tattatactcttatttattgaatttcatcaaacttaactactccactaactacaat 273  Q
    ||||||| | |||||||||||||||||||||| |||| ||||| ||||||||||||    
T  37101329 tattatatttttatttattgaatttcatcaaatttaattactctactaactacaat 37101274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 298 - 356
Target Start/End: Original strand, 3076659 - 3076716
Alignment:
Q  298 tactaattttaccattaaaatcaacacaattaatcatttccttaataattgtgcacaaa 356  Q
    ||||||||||| |||| ||||||||||||||||||||||  |||| |||||||||||||    
T  3076659 tactaattttatcattgaaatcaacacaattaatcattttgttaa-aattgtgcacaaa 3076716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 285 - 342
Target Start/End: Complemental strand, 18890612 - 18890555
Alignment:
Q  285 ttttagtaaatgttactaattttaccattaaaatcaacacaattaatcatttccttaa 342  Q
    ||||| |||||| |||||||||||||||||||| |||| ||| ||||||||| |||||    
T  18890612 ttttaataaatgatactaattttaccattaaaaacaactcaactaatcattttcttaa 18890555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 285 - 344
Target Start/End: Original strand, 9637875 - 9637934
Alignment:
Q  285 ttttagtaaatgttactaattttaccattaaaatcaacacaattaatcatttccttaata 344  Q
    ||||||||||||  ||  |||||| ||||||||||||||  |||||||||||||||||||    
T  9637875 ttttagtaaatgacacatattttatcattaaaatcaacattattaatcatttccttaata 9637934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 311 - 357
Target Start/End: Complemental strand, 29222247 - 29222201
Alignment:
Q  311 attaaaatcaacacaattaatcatttccttaataattgtgcacaaat 357  Q
    ||||||||||||||||||||| | |||||||||||| || |||||||    
T  29222247 attaaaatcaacacaattaattaattccttaataatcgtccacaaat 29222201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 164 - 206
Target Start/End: Original strand, 29374128 - 29374170
Alignment:
Q  164 tcaaaataattgtcactttacaataccaatgcaatatttatta 206  Q
    ||||||||||| ||||||||||||| |||||||| ||||||||    
T  29374128 tcaaaataattatcactttacaatatcaatgcaacatttatta 29374170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 13 - 79
Target Start/End: Original strand, 37995781 - 37995847
Alignment:
Q  13 aaggcaaactaaaggccgcaattaagacgactaggggcgggccacaataaaagtggaagttccaaca 79  Q
    ||||||||| ||||||||||||| || ||||||||||| | || ||||||| | |||| ||||||||    
T  37995781 aaggcaaaccaaaggccgcaatttaggcgactaggggcagaccgcaataaaggcggaatttccaaca 37995847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 252 - 345
Target Start/End: Original strand, 39213369 - 39213465
Alignment:
Q  252 taactactccactaactacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaacaca---attaatcatttccttaataa 345  Q
    |||||||||||||||||| |||||||||  | |||||| |||| | |||  ||||| |||||||||||| ||     ||||||||||||||||||||    
T  39213369 taactactccactaactataattaataagagtgttttattaaaggatacatattttgccattaaaatcatcaacgttattaatcatttccttaataa 39213465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 215 - 257
Target Start/End: Original strand, 41480137 - 41480179
Alignment:
Q  215 cactattatactcttatttattgaatttcatcaaacttaacta 257  Q
    |||||||||||  ||||||||||||||||||| ||||||||||    
T  41480137 cactattatacctttatttattgaatttcatccaacttaacta 41480179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 214 - 259
Target Start/End: Original strand, 32439857 - 32439902
Alignment:
Q  214 ccactattatactcttatttattgaatttcatcaaacttaactact 259  Q
    |||||||||||  | |||||||||||||||||| ||||||||||||    
T  32439857 ccactattatatccctatttattgaatttcatccaacttaactact 32439902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 216 - 257
Target Start/End: Original strand, 41478772 - 41478813
Alignment:
Q  216 actattatactcttatttattgaatttcatcaaacttaacta 257  Q
    ||||||||||  ||||||||||||||||||| ||||||||||    
T  41478772 actattatacctttatttattgaatttcatccaacttaacta 41478813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 227 - 259
Target Start/End: Original strand, 3076622 - 3076654
Alignment:
Q  227 cttatttattgaatttcatcaaacttaactact 259  Q
    |||||||||||||||||||| ||||||||||||    
T  3076622 cttatttattgaatttcatctaacttaactact 3076654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 217 - 257
Target Start/End: Original strand, 41480181 - 41480221
Alignment:
Q  217 ctattatactcttatttattgaatttcatcaaacttaacta 257  Q
    |||| ||| ||||||||||||||||||||| ||||||||||    
T  41480181 ctatcataatcttatttattgaatttcatctaacttaacta 41480221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 126; Significance: 8e-65; HSPs: 71)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 126; E-Value: 8e-65
Query Start/End: Original strand, 163 - 376
Target Start/End: Original strand, 35313821 - 35314035
Alignment:
Q  163 ctcaaaataattgtcactttacaataccaatgcaatatttattannnnnnnccactattatactcttatttattgaatttcatcaaacttaactactcca 262  Q
    ||||||||||||||||||||||||||  ||||||| ||||||||       |||||||||||||||||||||||||||||||||||||||||||||||||    
T  35313821 ctcaaaataattgtcactttacaataataatgcaacatttattacttttttccactattatactcttatttattgaatttcatcaaacttaactactcca 35313920  T
Q  263 ctaactacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaacacaattaatcatttccttaataattgtgca-caaatctta 361  Q
    ||||||||||||||||| |  | |||| |||||  |||||||||||||||| |||||||||||||||||||||||||||||||| ||||| |||   |||    
T  35313921 ctaactacaattaataaggttgctttaataaatactactaattttaccattgaaatcaacacaattaatcatttccttaataatcgtgcatcaatattta 35314020  T
Q  362 aacgactaatattgt 376  Q
    |||||||||||||||    
T  35314021 aacgactaatattgt 35314035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 163 - 391
Target Start/End: Complemental strand, 5789826 - 5789599
Alignment:
Q  163 ctcaaaataattgtcactttacaataccaatgcaatatttattannnnnnnccactattatactcttatttattgaatttcatcaaacttaactactcca 262  Q
    |||||||||||||||||||||||||| |||||||  ||||||||       ||||||||||||  ||||||||||||||||||| |||||||||| | ||    
T  5789826 ctcaaaataattgtcactttacaatatcaatgcatcatttattatttttt-ccactattataccattatttattgaatttcatccaacttaactatttca 5789728  T
Q  263 ctaactacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaacacaattaatcatttccttaataattgtgcacaaatcttaa 362  Q
    ||||||||||||||||| || |||||||||||||  ||||||||||| ||| || |||| |||||||||||||||||||||||| ||||||||| |||||    
T  5789727 ctaactacaattaataagggtgttttagtaaatgccactaattttactattgaattcaatacaattaatcatttccttaataatcgtgcacaaaccttaa 5789628  T
Q  363 acgactaatattgtttgacggaggtagta 391  Q
    | ||||||||||||  |||||||| ||||    
T  5789627 atgactaatattgtgagacggaggaagta 5789599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 164 - 376
Target Start/End: Complemental strand, 8947232 - 8947018
Alignment:
Q  164 tcaaaataattgtcactttacaa---taccaatgcaatatttattannnnnnnccactattatactcttatttattgaatttcatcaaacttaactactc 260  Q
    ||||||||||||||| |||||||   ||||||||||||||||||||       | | |||||||| |||||||||||||||||||| |||||||||||||    
T  8947232 tcaaaataattgtcattttacaacaataccaatgcaatatttattatttttttc-attattatacccttatttattgaatttcatccaacttaactactc 8947134  T
Q  261 cactaactacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaacacaattaatcatttccttaataattgtgcacaaatctt 360  Q
    ||||||||| ||||||||| |  |||||||||||| |||||||||||| |||| ||||||||||||||||||||||||||||||||| ||||||||  ||    
T  8947133 cactaactataattaataaggatgttttagtaaatattactaattttatcattgaaatcaacacaattaatcatttccttaataattatgcacaaacttt 8947034  T
Q  361 aaacgactaatattgt 376  Q
    |||||| |||||||||    
T  8947033 aaacgattaatattgt 8947018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 163 - 374
Target Start/End: Original strand, 16463621 - 16463834
Alignment:
Q  163 ctcaaaataattgtcactttacaataccaatgcaatatttattannnnnnn--ccactattatactcttatttattgaatttcatcaaacttaactactc 260  Q
    ||||||||||||||||||||| ||||||||||||  ||||||||         ||| |||| |||  ||||||||| ||||||||||||||| |||||||    
T  16463621 ctcaaaataattgtcactttagaataccaatgcagcatttattattattttttccattattttaccattatttattaaatttcatcaaactttactactc 16463720  T
Q  261 cactaactacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaacacaattaatcatttccttaataattgtgcacaaatctt 360  Q
    ||||||||||||||||||| || ||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||  ||||| ||| |||    
T  16463721 cactaactacaattaataagggtgttttagtaaatgatactaattttaccatcaaaatcaacacaattaatcatttccttaataaccgtgcataaacctt 16463820  T
Q  361 aaacgactaatatt 374  Q
    ||||||||| ||||    
T  16463821 aaacgactattatt 16463834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 163 - 374
Target Start/End: Original strand, 45235513 - 45235726
Alignment:
Q  163 ctcaaaataattgtcactttacaataccaatgcaatatttattannnnnnnc--cactattatactcttatttattgaatttcatcaaacttaactactc 260  Q
    ||||||||||||||||||||| ||||||||||||| ||||||||          || || ||||  ||||||||||||||||||||||||||||||| |     
T  45235513 ctcaaaataattgtcactttataataccaatgcaacatttattattatttttttcattactatatccttatttattgaatttcatcaaacttaactattt 45235612  T
Q  261 cactaactacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaacacaattaatcatttccttaataattgtgcacaaatctt 360  Q
    || |||||||||||||||| || ||||||||||||| || ||||||||||||| ||||||||||||| |||||||||||||||||| ||||||||| |||    
T  45235613 cattaactacaattaataagggtgttttagtaaatgatattaattttaccattgaaatcaacacaatcaatcatttccttaataatcgtgcacaaacctt 45235712  T
Q  361 aaacgactaatatt 374  Q
    ||||||||| ||||    
T  45235713 aaacgactattatt 45235726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 163 - 374
Target Start/End: Original strand, 36794218 - 36794429
Alignment:
Q  163 ctcaaaataattgtcactttacaataccaatgcaatatttattannnnnnnccactattatactcttatttattgaatttcatcaaacttaactactcca 262  Q
    |||||||||||| |||||||| ||||||||||||  ||||||||        || ||| |||| ||||||||||||| |||||| |||||||||||||||    
T  36794218 ctcaaaataattatcactttaaaataccaatgcagcatttattattttttttcattataatacccttatttattgaacttcatccaacttaactactcca 36794317  T
Q  263 ctaactacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaacacaattaatcatttccttaataattgtgcacaaatcttaa 362  Q
    ||||||||| ||||||| || ||||||||||| | ||||||||||||||| ||||||||||||||||||||||||||||||||   ||||  ||||||||    
T  36794318 ctaactacagttaataagggcgttttagtaaaagatactaattttaccatcaaaatcaacacaattaatcatttccttaataaccatgcatcaatcttaa 36794417  T
Q  363 acgactaatatt 374  Q
    ||||||| ||||    
T  36794418 acgactattatt 36794429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 163 - 376
Target Start/End: Complemental strand, 3323451 - 3323252
Alignment:
Q  163 ctcaaaataattgtcactttacaataccaatgcaatatttattannnnnnnccactattatactcttatttattgaatttcatcaaacttaactactcca 262  Q
    |||||||||||| |||||||||||||||||||||  ||||||||       ||||||||| ||||||| ||||||||||||||| |||||||||||||||    
T  3323451 ctcaaaataattctcactttacaataccaatgcagcatttattattttttcccactattacactcttacttattgaatttcatccaacttaactactcca 3323352  T
Q  263 ctaactacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaacacaattaatcatttccttaataattgtgcacaaatcttaa 362  Q
    ||||||||||||||              ||||||||||||||||||||||| ||||||||||||||||||||||   ||||||| ||||||||| |||||    
T  3323351 ctaactacaattaa--------------taaatgttactaattttaccattgaaatcaacacaattaatcatttttataataatcgtgcacaaaccttaa 3323266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 163 - 369
Target Start/End: Original strand, 37322363 - 37322569
Alignment:
Q  163 ctcaaaataattgtcactttacaataccaatgcaatatttattannnnnnnccactattatactcttatttattgaatttcatcaaacttaactactcca 262  Q
    ||||||||||||||||||||| |||||| ||| |  ||||||||       ||| |||||||| |||||||||||||||||||| |||||||||||||||    
T  37322363 ctcaaaataattgtcactttagaatacctatgtagcatttattatttttt-ccattattatacccttatttattgaatttcatctaacttaactactcca 37322461  T
Q  263 ctaactacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaacacaattaatca-tttccttaataattgtgcacaaatctta 361  Q
    ||||||||||||||||| ||  ||||| |||||| || ||||||||||||| ||||||||||||| ||||| ||||||||||||| ||||| ||| ||||    
T  37322462 ctaactacaattaataagggtattttaataaatgatattaattttaccattgaaatcaacacaatcaatcattttccttaataatcgtgcataaacctta 37322561  T
Q  362 aacgacta 369  Q
    ||||||||    
T  37322562 aacgacta 37322569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 163 - 374
Target Start/End: Original strand, 25637414 - 25637625
Alignment:
Q  163 ctcaaaataattgtcactttacaataccaatgcaatatttattannnnnnn-ccactattatactcttatttattgaatttcatcaaacttaactactcc 261  Q
    ||||||||||||||||||||| ||||||||||||  ||||||||        ||| ||||| || |||||||||| ||||||||| ||||||||||||||    
T  25637414 ctcaaaataattgtcactttagaataccaatgcagcatttattattttttttccattattacacccttatttattaaatttcatccaacttaactactcc 25637513  T
Q  262 actaactacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaacacaattaatcatttccttaataattgtgcacaaatctta 361  Q
      |||||||||||||||| || |||||||||||||  |||||||||||||| ||||||||||||||||||||||||||| ||||| ||||| ||| ||||    
T  25637514 tataactacaattaataaaggtgttttagtaaatgacactaattttaccatcaaaatcaacacaattaatcatttcctt-ataatcgtgcataaacctta 25637612  T
Q  362 aacgactaatatt 374  Q
    ||| |||| ||||    
T  25637613 aacaactattatt 25637625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 163 - 374
Target Start/End: Original strand, 39785519 - 39785733
Alignment:
Q  163 ctcaaaataattgtcactttacaataccaatgcaatatttattannnnnnnccactattatactcttatttattgaatttcatcaaacttaactactcca 262  Q
    ||||||||||||||||||||| ||||||||||||  ||||| ||       ||| ||| |||| ||||||||||||| |||||| |||||||||||||||    
T  39785519 ctcaaaataattgtcactttagaataccaatgcagcatttactattttttcccattataatacccttatttattgaacttcatccaacttaactactcca 39785618  T
Q  263 ctaactacaattaataatggagttttagtaaatgtta---ctaattttaccattaaaatcaacacaattaatcatttccttaataattgtgcacaaatct 359  Q
     ||||||||||||||||  | ||||||||||||| ||   ||||||||||||| ||||||||||||||||||||||||||||||||  |||||  || ||    
T  39785619 ttaactacaattaataagagtgttttagtaaatgatagtactaattttaccatcaaaatcaacacaattaatcatttccttaataaccgtgcatcaacct 39785718  T
Q  360 taaacgactaatatt 374  Q
    |||||||||| ||||    
T  39785719 taaacgactattatt 39785733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 166 - 369
Target Start/End: Original strand, 43410363 - 43410566
Alignment:
Q  166 aaaataattgtcactttacaataccaatgcaatatttattannnnnnnccactattatactcttatttattgaatttcatcaaacttaactactccacta 265  Q
    |||||||||||||||||| ||||| ||||||| ||||||||       ||| ||||||||||| ||||||||||||||||  ||||||||||||||| ||    
T  43410363 aaaataattgtcactttagaatactaatgcaacatttattatttttttccattattatactctcatttattgaatttcattcaacttaactactccatta 43410462  T
Q  266 actacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaacacaattaatcatttccttaataattgtgcacaaatcttaaacg 365  Q
    |||||||||||||| |   |||||||||||| || |||||||| |||| | ||||||||||||||| |||||||||||||| |||||||||  ||||| |    
T  43410463 actacaattaataaggatattttagtaaatgatattaattttatcattgatatcaacacaattaataatttccttaataatcgtgcacaaacattaaagg 43410562  T
Q  366 acta 369  Q
    ||||    
T  43410563 acta 43410566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 163 - 369
Target Start/End: Complemental strand, 14523551 - 14523345
Alignment:
Q  163 ctcaaaataattgtcactttacaataccaatgcaatatttattannnnnnnccactattatactcttatttattgaatttcatcaaacttaactactcca 262  Q
    ||||||||||||||||||||| |||| |||||||| ||||||||       ||| |||||||  |||||| ||||||||||||| |||||||||||||||    
T  14523551 ctcaaaataattgtcactttagaatatcaatgcaacatttattattattttccattattatatccttattaattgaatttcatctaacttaactactcca 14523452  T
Q  263 ctaactacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaacacaattaatcatttccttaataattgtgcacaaatcttaa 362  Q
    ||||||||||||||||| |   |||||||||||| || ||||||||||||| ||||||||||||  |||||||||||||||||   |||| |||  ||||    
T  14523451 ctaactacaattaataaggatattttagtaaatgatattaattttaccattgaaatcaacacaaaaaatcatttccttaataaccttgcataaactttaa 14523352  T
Q  363 acgacta 369  Q
    |||||||    
T  14523351 acgacta 14523345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 166 - 364
Target Start/End: Original strand, 34225527 - 34225725
Alignment:
Q  166 aaaataattgtcactttacaataccaatgcaatatttattannnnnnnccactattatactcttatttattgaatttcatcaaacttaactactccacta 265  Q
    |||||||||||||||||  |||||||||||| |||||||||        || |||||||| |||||||||| ||||||||  ||||||| ||||||| ||    
T  34225527 aaaataattgtcactttggaataccaatgcagtatttattattttttttcattattatacccttatttattaaatttcattcaacttaaatactccatta 34225626  T
Q  266 actacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaacacaattaatcatttccttaataattgtgcacaaatcttaaac 364  Q
    |||||||||||||| || ||||||||||||  |||||| ||||||||||||||||| | ||||| |||||||||||||||| ||||||||| |||||||    
T  34225627 actacaattaataagggtgttttagtaaataatactaagtttaccattaaaatcaatataattattcatttccttaataatcgtgcacaaaccttaaac 34225725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 163 - 374
Target Start/End: Complemental strand, 36354621 - 36354411
Alignment:
Q  163 ctcaaaataattgtcactttacaataccaatgcaatatttattannnnnnnccactattatactcttatttattgaatttcatcaaacttaactactcca 262  Q
    ||||||||||||||||||||| ||||||||||||  ||||||||       ||| ||||||||  ||||||||||||||||||| |||||||||||||||    
T  36354621 ctcaaaataattgtcactttagaataccaatgcagaatttattatttttt-ccattattataccattatttattgaatttcatccaacttaactactcca 36354523  T
Q  263 ctaactacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaacacaattaatcatttccttaataattgtgcacaaatcttaa 362  Q
    |||||||||||||||||  | |||| | |||||  ||||||||||||||| ||||||||||||| || |||||||||||||||| || || ||| |||||    
T  36354522 ctaactacaattaataagagtgtttcaataaataatactaattttaccatcaaaatcaacacaactagtcatttccttaataatcgtacataaaccttaa 36354423  T
Q  363 acgactaatatt 374  Q
    | ||||| ||||    
T  36354422 atgactattatt 36354411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 215 - 376
Target Start/End: Complemental strand, 16377787 - 16377622
Alignment:
Q  215 cactattatactcttatttattgaatttcatcaaacttaa----ctactccactaactacaattaataatggagttttagtaaatgttactaattttacc 310  Q
    |||||||||||| ||||||||||||||||||| |||||||    ||||||||||||||||||||||||| |   |||| ||||||| || ||||||||||    
T  16377787 cactattatacttttatttattgaatttcatccaacttaattaactactccactaactacaattaataaggttattttggtaaatgatattaattttacc 16377688  T
Q  311 attaaaatcaacacaattaatcatttccttaataattgtgcacaaatcttaaacgactaatattgt 376  Q
    |||  |||||||||||||||||||||| |||||||| ||||||||||||||||||| |||||||||    
T  16377687 attgtaatcaacacaattaatcatttctttaataatcgtgcacaaatcttaaacgattaatattgt 16377622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 163 - 346
Target Start/End: Complemental strand, 34120616 - 34120435
Alignment:
Q  163 ctcaaaataattgtcactttacaataccaatgcaatatttattannnnnnnccactattatactcttatttattgaatttcatcaaacttaactactcca 262  Q
    ||||||||||||||||||||| ||||||||||||  ||||||||       ||| ||||||||||||| ||||||||||||||| |||||||||| ||||    
T  34120616 ctcaaaataattgtcactttaaaataccaatgcagcatttattatttttttccattattatactcttacttattgaatttcatccaacttaactattcca 34120517  T
Q  263 ctaactacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaacacaattaatcatttccttaataat 346  Q
    |||||||||||||||||     |||||||||||  ||||| ||||||||| ||||||||||||||||||||||| |||||||||    
T  34120516 ctaactacaattaataa--atattttagtaaataatactagttttaccatcaaaatcaacacaattaatcattttcttaataat 34120435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 227 - 369
Target Start/End: Complemental strand, 31448808 - 31448666
Alignment:
Q  227 cttatttattgaatttcatcaaacttaactactccactaactacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaacacaa 326  Q
    |||||||||||||||||||| |||||||||| | |||||||| |||||| ||| || |||||||||||||   ||||||||||||| |||||||||||||    
T  31448808 cttatttattgaatttcatccaacttaactatttcactaactgcaattagtaagggtgttttagtaaatgactctaattttaccatcaaaatcaacacaa 31448709  T
Q  327 ttaatcatttccttaataattgtgcacaaatcttaaacgacta 369  Q
    |||||||||||||||||||| ||||||||| ||||||||||||    
T  31448708 ttaatcatttccttaataatcgtgcacaaaccttaaacgacta 31448666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 178 - 361
Target Start/End: Complemental strand, 35242461 - 35242278
Alignment:
Q  178 actttacaataccaatgcaatatttattannnnnnnccactattatactcttatttattgaatttcatcaaacttaactactccactaactacaattaat 277  Q
    |||||| ||||||||||||||||||||||        |||||||||||| ||||||||||||||||||| ||||||||||||| ||||||||||||||||    
T  35242461 actttagaataccaatgcaatatttattattagttttcactattatacttttatttattgaatttcatccaacttaactactcaactaactacaattaat 35242362  T
Q  278 aatggagttttagtaaatgttactaattttaccattaaaatcaacacaattaatcatttccttaataattgtgcacaaatctta 361  Q
    ||     || ||||||||| | ||||||||| ||||||||||||||||||||| ||| ||||||| ||||||||| ||||||||    
T  35242361 aaatatattctagtaaatgattctaattttaacattaaaatcaacacaattaaacatctccttaaaaattgtgcataaatctta 35242278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 163 - 366
Target Start/End: Original strand, 17695262 - 17695467
Alignment:
Q  163 ctcaaaataattgtcactttacaataccaatgcaatatttattannnnnnn--ccactattatactcttatttattgaatttcatcaaacttaactactc 260  Q
    ||||||||||||||||||||| |||| |||||||  ||||||||         |||||||||||| |||||||||||||||||||| |||||||||||||    
T  17695262 ctcaaaataattgtcactttagaatatcaatgcagcatttattattattttttccactattatacccttatttattgaatttcatccaacttaactactc 17695361  T
Q  261 cactaactacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaacacaattaatcatttccttaataattgtgcacaaatctt 360  Q
     |||||||| |||||||||     |||| ||||||| ||  |||||||||||| ||||||| |||||||||||||||||||||||| ||||||||| |||    
T  17695362 tactaactataattaataagaatatttttgtaaatgatatcaattttaccattgaaatcaatacaattaatcatttccttaataatcgtgcacaaacctt 17695461  T
Q  361 aaacga 366  Q
    ||||||    
T  17695462 aaacga 17695467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 163 - 374
Target Start/End: Complemental strand, 15359268 - 15359055
Alignment:
Q  163 ctcaaaataattgtcactttacaataccaatgcaatatttattannnnnnnc--cactattatactcttatttattgaatttcatcaaacttaactactc 260  Q
    |||||||||||||| |||||| |||| ||||||| |||||||||          || ||| |||| ||||||||||||| |||||| |||||||||||||    
T  15359268 ctcaaaataattgttactttagaatatcaatgcagtatttattagtatttttttcattataatacccttatttattgaacttcatccaacttaactactc 15359169  T
Q  261 cactaactacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaacacaattaatcatttccttaataattgtgcacaaatctt 360  Q
    ||||||||||||||||||| || ||||||||||||| || |||||||| ||| ||||||||||||||||||||| | ||||||||  |||||  || |||    
T  15359168 cactaactacaattaataagggtgttttagtaaatgatattaattttatcatcaaaatcaacacaattaatcatcttcttaataaccgtgcatcaacctt 15359069  T
Q  361 aaacgactaatatt 374  Q
    ||||||||| ||||    
T  15359068 aaacgactattatt 15359055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 218 - 366
Target Start/End: Original strand, 39691479 - 39691627
Alignment:
Q  218 tattatactcttatttattgaatttcatcaaacttaactactccactaactacaattaataatggagttttagtaaatgttactaattttaccattaaaa 317  Q
    |||||||| |||||||||||||||||||  ||||| ||||||||||||||| ||||||||||  |  |||||||||||| || |||||||| |||| |||    
T  39691479 tattatacccttatttattgaatttcattcaactttactactccactaactgcaattaataagagtattttagtaaatgatattaattttatcattgaaa 39691578  T
Q  318 tcaacacaattaatcatttccttaataattgtgcacaaatcttaaacga 366  Q
    ||||||||||||||||||| ||||||||| ||||||||| |||||||||    
T  39691579 tcaacacaattaatcattttcttaataatcgtgcacaaaccttaaacga 39691627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 227 - 369
Target Start/End: Original strand, 16805879 - 16806021
Alignment:
Q  227 cttatttattgaatttcatcaaacttaactactccactaactacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaacacaa 326  Q
    ||||| |||| ||||| ||| |||||||| ||||||||||||||||||||||| |   |||||||||||| |||||||||||| ||||||||||||||||    
T  16805879 cttatctattaaatttaatccaacttaacaactccactaactacaattaataaggatattttagtaaatgatactaattttactattaaaatcaacacaa 16805978  T
Q  327 ttaatcatttccttaataattgtgcacaaatcttaaacgacta 369  Q
    ||||||||||| |||||||| ||||||||| ||||||| ||||    
T  16805979 ttaatcatttctttaataatcgtgcacaaaccttaaactacta 16806021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 227 - 369
Target Start/End: Original strand, 16845160 - 16845302
Alignment:
Q  227 cttatttattgaatttcatcaaacttaactactccactaactacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaacacaa 326  Q
    ||||| |||| ||||| ||| |||||||| ||||||||||||||||||||||| |   |||||||||||| |||||||||||| ||||||||||||||||    
T  16845160 cttatctattaaatttaatccaacttaacaactccactaactacaattaataaggatattttagtaaatgatactaattttactattaaaatcaacacaa 16845259  T
Q  327 ttaatcatttccttaataattgtgcacaaatcttaaacgacta 369  Q
    ||||||||||| |||||||| ||||||||| ||||||| ||||    
T  16845260 ttaatcatttctttaataatcgtgcacaaaccttaaactacta 16845302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 163 - 350
Target Start/End: Complemental strand, 9458444 - 9458263
Alignment:
Q  163 ctcaaaataattgtcactttacaataccaatgcaatatttattannnnnnnccactattatactcttatttattgaatttcatcaaacttaactactcca 262  Q
    ||||||||||||||||||||| ||||||||||||  ||||||||       ||| |||||||| |||||||||| ||||||||| ||||| |||||||||    
T  9458444 ctcaaaataattgtcactttagaataccaatgcagcatttattatttttt-ccattattatacccttatttattaaatttcatccaactttactactcca 9458346  T
Q  263 ctaactacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaacacaattaatcatttccttaataattgtg 350  Q
    ||||||||||||||||| || |||||| ||      |||||||||||||| |||||||||||||||||| |||| |||||||| ||||    
T  9458345 ctaactacaattaataagggtgttttaata-----cactaattttaccatcaaaatcaacacaattaattattttcttaataactgtg 9458263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 176 - 369
Target Start/End: Complemental strand, 43115968 - 43115775
Alignment:
Q  176 tcactttacaataccaatgcaatatttattannnnnnnccactattatactcttatttattgaatttcatcaaacttaactactccactaactacaatta 275  Q
    ||||||||||||| ||||| |  ||||||||       ||| ||||||||  |||||  |||||||||||  |||||||||||||||||||||||||| |    
T  43115968 tcactttacaatatcaatgtagcatttattatttttttccattattataccattattcgttgaatttcattcaacttaactactccactaactacaataa 43115869  T
Q  276 ataatggagttttagtaaatgttactaattttaccattaaaatcaacacaattaatcatttccttaataattgtgcacaaatcttaaacgacta 369  Q
    ||||  |  |||||||||||| |||||| |||| |||| ||||||||||||||||||||||| |||||||| | |||||||  |||||||||||    
T  43115868 ataagagtattttagtaaatgctactaactttatcattgaaatcaacacaattaatcatttctttaataatcgcgcacaaactttaaacgacta 43115775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 222 - 374
Target Start/End: Complemental strand, 11742648 - 11742497
Alignment:
Q  222 atactcttatttattgaatttcatcaaacttaactactccactaactacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaa 321  Q
    |||| ||||||||||||| |||||||||||||||||||||| |||||||||||||||| || |||||| |||||  || | | |||||||| ||||||||    
T  11742648 atacccttatttattgaacttcatcaaacttaactactccattaactacaattaataagggtgttttaataaataatattga-tttaccatcaaaatcaa 11742550  T
Q  322 cacaattaatcatttccttaataattgtgcacaaatcttaaacgactaatatt 374  Q
     ||||||||  | || ||||||||| ||||| |||  ||||||||||||||||    
T  11742549 tacaattaaaaaatttcttaataatcgtgcataaacgttaaacgactaatatt 11742497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 285 - 369
Target Start/End: Original strand, 19937733 - 19937817
Alignment:
Q  285 ttttagtaaatgttactaattttaccattaaaatcaacacaattaatcatttccttaataattgtgcacaaatcttaaacgacta 369  Q
    |||||||||||| || ||||||||||||| |||||||||||||||||||||||||||||||| ||||||||| ||||||||||||    
T  19937733 ttttagtaaatgatattaattttaccattgaaatcaacacaattaatcatttccttaataatcgtgcacaaaccttaaacgacta 19937817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 228 - 374
Target Start/End: Complemental strand, 39329777 - 39329629
Alignment:
Q  228 ttatttattgaatttcatcaaacttaactactccactaactacaattaataatggagttttagtaaatgttactaattttaccattaaaatca--acaca 325  Q
    ||||||||||||||||||| || |||||||||||| ||||||||||||||||  | ||||||||||||| || |||||||| |||| ||||||  |||||    
T  39329777 ttatttattgaatttcatccaatttaactactcca-taactacaattaataagagtgttttagtaaatgctattaattttatcattgaaatcaatacaca 39329679  T
Q  326 attaatcatttccttaataattgtgcacaaatc-ttaaacgactaatatt 374  Q
    ||| ||||||| ||||  ||| ||||||||| | ||||||||||||||||    
T  39329678 attgatcattttcttagaaatcgtgcacaaaacgttaaacgactaatatt 39329629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 227 - 374
Target Start/End: Complemental strand, 18853316 - 18853168
Alignment:
Q  227 cttatttattgaatttcatcaaacttaactactccactaactacaattaataatggagttttagtaaatgttactaatt--ttaccattaaaatcaacac 324  Q
    |||||||||||||||||||| || |||| ||||| ||||||||||| ||||||  |  |||| ||||||| ||| ||||  ||| |||| ||||||||||    
T  18853316 cttatttattgaatttcatccaaattaattactctactaactacaactaataagagtattttggtaaatgatac-aattaattatcattgaaatcaacac 18853218  T
Q  325 aattaatcatttccttaataattgtgcacaaatcttaaacgactaatatt 374  Q
    ||||||| ||||||||||  || |||||||||| ||||||||||| ||||    
T  18853217 aattaattatttccttaaagatcgtgcacaaattttaaacgactattatt 18853168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 248 - 337
Target Start/End: Original strand, 19426474 - 19426564
Alignment:
Q  248 aacttaactactccactaactacaattaataatggagttttagtaaatgttactaattttaccatt-aaaatcaacacaattaatcatttc 337  Q
    ||||||||||||| ||| ||||||||||||||||   |||||||||||||| ||||||||| |||| ||||||||||||||||||||||||    
T  19426474 aacttaactactcgacttactacaattaataatgatattttagtaaatgttgctaattttatcattgaaaatcaacacaattaatcatttc 19426564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 166 - 277
Target Start/End: Complemental strand, 5272314 - 5272204
Alignment:
Q  166 aaaataattgtcactttacaataccaatgcaatatttattannnnnnnccactattatactcttatttattgaatttcatcaaacttaactactccacta 265  Q
    |||||||||||||||||| ||||| ||||||| ||||||||       ||| |||||||| |||||||||||||||||||| || |||| ||||||||||    
T  5272314 aaaataattgtcactttagaatacaaatgcaacatttattatttttc-ccattattatacccttatttattgaatttcatccaatttaattactccacta 5272216  T
Q  266 actacaattaat 277  Q
    ||||||||||||    
T  5272215 actacaattaat 5272204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 215 - 336
Target Start/End: Complemental strand, 28170710 - 28170589
Alignment:
Q  215 cactattatactcttatttattgaatttcatcaaacttaactactccactaactacaattaataatggagttttagtaaatgttactaattttaccatta 314  Q
    ||||||||||||||||||||| |||||||||| || |||| || || | |||||||||||||||| |  ||  |||||||||  |||||||||||| ||     
T  28170710 cactattatactcttatttatagaatttcatccaatttaattattctattaactacaattaataaagctgtactagtaaatgcaactaattttacccttg 28170611  T
Q  315 aaatcaacacaattaatcattt 336  Q
    ||||||||| ||||||||||||    
T  28170610 aaatcaacataattaatcattt 28170589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 216 - 336
Target Start/End: Original strand, 43730603 - 43730720
Alignment:
Q  216 actattatactcttatttattgaatttcatcaaacttaactactccactaactacaattaataatggagttttagtaaatgttactaattttaccattaa 315  Q
    |||| |||||| ||||||||||||||||| | | ||||||||||| | |||||||||||||||| |   |||||||||||| || |||||||||||||||    
T  43730603 actaatatacttttatttattgaatttcaccta-cttaactactctagtaactacaattaataaggt--ttttagtaaatgatattaattttaccattaa 43730699  T
Q  316 aatcaacacaattaatcattt 336  Q
    ||||||||||  |||||||||    
T  43730700 aatcaacacacctaatcattt 43730720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 215 - 349
Target Start/End: Complemental strand, 43699723 - 43699592
Alignment:
Q  215 cactattatactcttatttattgaatttcatcaaacttaactactccactaactacaattaataatggagttttagtaaatgttactaattttaccatta 314  Q
    ||||||||||| ||| |||||||||||| ||| ||||||| |||||||||||    ||||||||   |  ||||| |||||| |||||||||||| |||     
T  43699723 cactattatacccttgtttattgaattttatccaacttaattactccactaaa---aattaataggtgtattttaataaatgatactaattttactattg 43699627  T
Q  315 aaatcaacacaattaatcatttccttaataattgt 349  Q
    ||||||||||| |||||||||| ||||||||||||    
T  43699626 aaatcaacacagttaatcattttcttaataattgt 43699592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 228 - 313
Target Start/End: Complemental strand, 32831289 - 32831204
Alignment:
Q  228 ttatttattgaatttcatcaaacttaactactccactaactacaattaataatggagttttagtaaatgttactaattttaccatt 313  Q
    |||||||||||||||||||  | |||||||||||| |||||||||||||||| |  ||||||||||||| || |||||||||||||    
T  32831289 ttatttattgaatttcatctcatttaactactccaataactacaattaataaagatgttttagtaaatgatattaattttaccatt 32831204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 305 - 374
Target Start/End: Original strand, 39443789 - 39443858
Alignment:
Q  305 tttaccattaaaatcaacacaattaatcatttccttaataattgtgcacaaatcttaaacgactaatatt 374  Q
    ||||| ||| ||||||||| |||||||||||| ||||||||||||||||||| |||||||||||||||||    
T  39443789 tttactattgaaatcaacaaaattaatcattttcttaataattgtgcacaaaccttaaacgactaatatt 39443858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 163 - 271
Target Start/End: Complemental strand, 7495018 - 7494909
Alignment:
Q  163 ctcaaaataattgtcactttacaataccaatgcaatatttattannnnnnnc-cactattatactcttatttattgaatttcatcaaacttaactactcc 261  Q
    ||||||||||||||||||||| ||||||||||||  ||||||||         || |||||||| |||||||||||||||||||| ||||||||||||||    
T  7495018 ctcaaaataattgtcactttagaataccaatgcagcatttattatttttttttcattattatacccttatttattgaatttcatccaacttaactactcc 7494919  T
Q  262 actaactaca 271  Q
     |||||||||    
T  7494918 gctaactaca 7494909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 163 - 364
Target Start/End: Original strand, 28186148 - 28186348
Alignment:
Q  163 ctcaaaataattgtcactttacaataccaatgcaatatttattannnnnnnccactattatactcttatttattgaatttcatcaaacttaactactcca 262  Q
    ||||||||||||||||||||| ||||  |||||| |||| ||||       ||||||||||  | ||||||||||||||||||  |||||||||||||      
T  28186148 ctcaaaataattgtcactttataatataaatgcagtattaattatatttttccactattatttttttatttattgaatttcattcaacttaactactctg 28186247  T
Q  263 ctaactacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaacacaattaatcatttccttaataattgtgcacaaatcttaa 362  Q
    ||||||| ||| ||||| |   ||||| |||||| |  ||||||||||||||| |||||||  |||||| |||| ||||| |||  | |||||| |||||    
T  28186248 ctaactaaaatgaataaggatattttaataaatgattataattttaccattaatatcaaca-tattaattattttcttaaaaatcatccacaaaacttaa 28186346  T
Q  363 ac 364  Q
    ||    
T  28186347 ac 28186348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 164 - 279
Target Start/End: Complemental strand, 26863539 - 26863421
Alignment:
Q  164 tcaaaataattgtcactttacaataccaatgcaatatttattannnnnnn---ccactattatactcttatttattgaatttcatcaaacttaactactc 260  Q
    ||||||||||||||||||||||||| | ||| || ||||||||          ||||||||||||  ||||||| |||||||||||  ||||||||||||    
T  26863539 tcaaaataattgtcactttacaatatctatgtaaaatttattatatttcttttccactattatacatttatttaatgaatttcatccgacttaactactc 26863440  T
Q  261 cactaactacaattaataa 279  Q
    |||||||||||||||||||    
T  26863439 cactaactacaattaataa 26863421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 298 - 385
Target Start/End: Complemental strand, 27501582 - 27501495
Alignment:
Q  298 tactaattttaccattaaaatcaacacaattaatcatttccttaataattgtgcacaaatcttaaacgactaatattgtttgacggag 385  Q
    |||||||||||||||| ||||||||| |||| |||||||||||||||||  | |||||| |||||||||| ||||||||  |||||||    
T  27501582 tactaattttaccattgaaatcaacataatttatcatttccttaataatcatacacaaaccttaaacgacgaatattgtgagacggag 27501495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 228 - 346
Target Start/End: Complemental strand, 17346476 - 17346359
Alignment:
Q  228 ttatttattgaatttcatcaaacttaactactccactaactacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaacacaat 327  Q
    |||||||||||||||| || ||||||||||||||||||||||||||||||||     ||||| |||||| || |||||||||  || ||||||| | |||    
T  17346476 ttatttattgaatttcttccaacttaactactccactaactacaattaataaaaatattttaataaatgatattaattttacttttgaaatcaaaataat 17346377  T
Q  328 taatcatttccttaataat 346  Q
    |||| ||||| ||||||||    
T  17346376 taat-atttctttaataat 17346359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 302 - 364
Target Start/End: Complemental strand, 26608008 - 26607946
Alignment:
Q  302 aattttaccattaaaatcaacacaattaatcatttccttaataattgtgcacaaatcttaaac 364  Q
    |||||||||||| |||||||||||||||||||||| ||||||||| ||||||||| |||||||    
T  26608008 aattttaccattgaaatcaacacaattaatcattttcttaataatcgtgcacaaaccttaaac 26607946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 264 - 336
Target Start/End: Complemental strand, 1206781 - 1206709
Alignment:
Q  264 taactacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaacacaattaatcattt 336  Q
    |||||||||||||||| |   ||||||||||||||||||||||||||| | ||||||||| ||||||||||||    
T  1206781 taactacaattaataaggatattttagtaaatgttactaattttaccactgaaatcaacataattaatcattt 1206709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 269 - 345
Target Start/End: Original strand, 32783404 - 32783480
Alignment:
Q  269 acaattaataatggagttttagtaaatgttactaattttaccattaaaatcaacacaattaatcatttccttaataa 345  Q
    ||||||||||| || ||||||||||||| || ||||||||| || ||||| ||||||||||||||||| ||||||||    
T  32783404 acaattaataaaggtgttttagtaaatgatattaattttactatcaaaataaacacaattaatcattttcttaataa 32783480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 230 - 334
Target Start/End: Complemental strand, 41221058 - 41220954
Alignment:
Q  230 atttattgaatttcatcaaacttaactactccactaactacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaacacaatta 329  Q
    |||||||||| ||||||  ||||||||||| || ||||||||||||||||     ||||| |||||| |||||||||||  ||| |||||||||||||||    
T  41221058 atttattgaacttcatctgacttaactacttcattaactacaattaataaaaatattttaataaatgatactaattttataattgaaatcaacacaatta 41220959  T
Q  330 atcat 334  Q
    |||||    
T  41220958 atcat 41220954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 166 - 317
Target Start/End: Original strand, 19444083 - 19444234
Alignment:
Q  166 aaaataattgtcactttacaataccaatgcaatatttattannnnnnnccactattatactcttatttattgaatttcatcaaacttaactactccacta 265  Q
    |||||||||||||||| | |||| |||||||| ||||||||        || |||||||| ||| ||||||||| || ||| | ||||||||||| ||||    
T  19444083 aaaataattgtcacttcaaaatatcaatgcaacatttattatttttttacattattatacccttgtttattgaaatttatccatcttaactactcgacta 19444182  T
Q  266 actacaattaataatggagttttagtaaatgttactaattttaccattaaaa 317  Q
    | |||||||||||||    |||||||||||  || |||||||| ||||||||    
T  19444183 attacaattaataataacattttagtaaataatattaattttatcattaaaa 19444234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 251 - 345
Target Start/End: Original strand, 31976370 - 31976464
Alignment:
Q  251 ttaactactccactaactacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaacacaattaatcatttccttaataa 345  Q
    ||||||||||||||||||| ||||| |||  | |||||||||||||  ||  ||||||| ||| |||||||||| | ||||||||||||||||||    
T  31976370 ttaactactccactaactataattattaagagtgttttagtaaatgaaacatattttactattgaaatcaacactactaatcatttccttaataa 31976464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 218 - 279
Target Start/End: Original strand, 19937374 - 19937435
Alignment:
Q  218 tattatactcttatttattgaatttcatcaaacttaactactccactaactacaattaataa 279  Q
    ||||||||  ||||||||||||||| ||  ||||||||||||||||||||||||||||||||    
T  19937374 tattatacctttatttattgaattttattcaacttaactactccactaactacaattaataa 19937435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 228 - 336
Target Start/End: Original strand, 43730431 - 43730537
Alignment:
Q  228 ttatttattgaatttcatcaaacttaactactccactaactacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaacacaat 327  Q
    ||||||||||||||||| | | ||||||||||| | ||| ||||||||||||   |  ||||||||||| || |||||||||||||||||||||||||      
T  43730431 ttatttattgaatttcaccga-cttaactactctagtaaatacaattaataa-aaaaatttagtaaatgatattaattttaccattaaaatcaacacacc 43730528  T
Q  328 taatcattt 336  Q
    |||||||||    
T  43730529 taatcattt 43730537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 214 - 277
Target Start/End: Complemental strand, 7438980 - 7438917
Alignment:
Q  214 ccactattatactcttatttattgaatttcatcaaacttaactactccactaactacaattaat 277  Q
    |||||||||||| |||||||||||||||||||  ||||||||||||||| ||| || |||||||    
T  7438980 ccactattatacccttatttattgaatttcattcaacttaactactccaataattataattaat 7438917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 301 - 360
Target Start/End: Complemental strand, 12520891 - 12520832
Alignment:
Q  301 taattttaccattaaaatcaacacaattaatcatttccttaataattgtgcacaaatctt 360  Q
    ||||||||||||||||||||||||||||||| ||||  || ||||| |||||||||||||    
T  12520891 taattttaccattaaaatcaacacaattaattattttattgataatcgtgcacaaatctt 12520832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 218 - 281
Target Start/End: Original strand, 17122973 - 17123036
Alignment:
Q  218 tattatactcttatttattgaatttcatcaaacttaactactccactaactacaattaataatg 281  Q
    ||||||||||||||||||||||||||||| ||  |||| |||| ||||| ||||||||||||||    
T  17122973 tattatactcttatttattgaatttcatctaatctaacaactcaactaattacaattaataatg 17123036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 252 - 342
Target Start/End: Complemental strand, 26337211 - 26337122
Alignment:
Q  252 taactactccactaactacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaacacaattaatcatttccttaa 342  Q
    |||||||||||||||||| ||||||||  || |||||| |||||| ||  ||||||| |||||||||||||  || |||||||||||||||    
T  26337211 taactactccactaactataattaatagaggtgttttaataaatgatatcaattttaacattaaaatcaacttaa-taatcatttccttaa 26337122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 228 - 322
Target Start/End: Complemental strand, 38187997 - 38187903
Alignment:
Q  228 ttatttattgaatttcatcaaacttaactactccactaactacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaac 322  Q
    |||||||||||||||||    |||||  ||||| |||||||||||||||||  || ||||||||||||   |||||||||||||||||| |||||    
T  38187997 ttatttattgaatttcacttcacttacatactcgactaactacaattaataggggtgttttagtaaattaaactaattttaccattaaagtcaac 38187903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 216 - 333
Target Start/End: Complemental strand, 36173463 - 36173351
Alignment:
Q  216 actattatactcttatttattgaatttcatcaaacttaactactccactaactacaattaataatggagttttagtaaatgttactaattttaccattaa 315  Q
    ||||||||||| |||||||||||||||||| ||||||||    |||||||| || |||| ||||  |  ||||| |||||| || |||||||| || |||    
T  36173463 actattatacttttatttattgaatttcattaaacttaa----tccactaattataatt-ataagagtattttaataaatgatattaattttatcactaa 36173369  T
Q  316 aatcaacacaattaatca 333  Q
    |||||||| |||||||||    
T  36173368 aatcaacaaaattaatca 36173351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 325 - 376
Target Start/End: Complemental strand, 7438923 - 7438872
Alignment:
Q  325 aattaatcatttccttaataattgtgcacaaatcttaaacgactaatattgt 376  Q
    |||||||||||||||||||||| |||| |||| ||||||| |||||||||||    
T  7438923 aattaatcatttccttaataatcgtgctcaaaccttaaacaactaatattgt 7438872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 269 - 368
Target Start/End: Complemental strand, 10005197 - 10005099
Alignment:
Q  269 acaattaataatggagttttagtaaatgttactaattttaccattaaaatcaacacaattaatcatttccttaataattgtgcacaaatcttaaacgact 368  Q
    ||||||||||| |   |||||||||||| |||||||||||    | |||||||||||||| ||||||| ||| |||| |||||||||| |||||||||||    
T  10005197 acaattaataaagatattttagtaaatgatactaattttattgctgaaatcaacacaattgatcattttctt-ataaatgtgcacaaaccttaaacgact 10005099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 252 - 323
Target Start/End: Complemental strand, 33407064 - 33406993
Alignment:
Q  252 taactactccactaactacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaaca 323  Q
    |||||| ||||||||||| |||||||||||| ||||  |||||||  ||  |||||||||||||||||||||    
T  33407064 taactaatccactaactataattaataatggtgtttcggtaaatgaaacatattttaccattaaaatcaaca 33406993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 13 - 79
Target Start/End: Complemental strand, 25441653 - 25441587
Alignment:
Q  13 aaggcaaactaaaggccgcaattaagacgactaggggcgggccacaataaaagtggaagttccaaca 79  Q
    ||||| ||| ||||||||||||| || ||||||||||||| || ||||||| |||||| ||||||||    
T  25441653 aaggctaaccaaaggccgcaatttaggcgactaggggcggaccgcaataaaggtggaatttccaaca 25441587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 218 - 307
Target Start/End: Complemental strand, 26608267 - 26608178
Alignment:
Q  218 tattatactcttatttattgaatttcatcaaacttaactactccactaactacaattaataatggagttttagtaaatgttactaatttt 307  Q
    |||||||| |||||||| | | ||||||  |||||||||| ||||||||||| |||||||||  |  |||||||||||| || |||||||    
T  26608267 tattatacccttatttaattattttcattcaacttaactaatccactaactataattaataagagtattttagtaaatgatattaatttt 26608178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 218 - 258
Target Start/End: Complemental strand, 1206815 - 1206775
Alignment:
Q  218 tattatactcttatttattgaatttcatcaaacttaactac 258  Q
    |||||||||| |||||||||||||||||| |||||||||||    
T  1206815 tattatactcatatttattgaatttcatccaacttaactac 1206775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 228 - 276
Target Start/End: Original strand, 18202104 - 18202152
Alignment:
Q  228 ttatttattgaatttcatcaaacttaactactccactaactacaattaa 276  Q
    ||||||||| ||||||||| |||||||||||| ||||||||||| ||||    
T  18202104 ttatttattaaatttcatccaacttaactacttcactaactacatttaa 18202152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 264 - 352
Target Start/End: Original strand, 27866527 - 27866614
Alignment:
Q  264 taactacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaacacaattaatcatttccttaataattgtgca 352  Q
    |||||||||||||||| |   ||||| |||| | || |||||||| ||||||||||||||  ||||||||||||||||| ||| |||||    
T  27866527 taactacaattaataaggatattttactaaa-gatattaattttatcattaaaatcaacattattaatcatttccttaaaaatcgtgca 27866614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 163 - 336
Target Start/End: Complemental strand, 34451511 - 34451341
Alignment:
Q  163 ctcaaaataattgtcactttacaataccaatgcaatatttattannnnnnnccactattatactcttatttattgaatttcatcaaacttaactactcca 262  Q
    ||||||||||||||||||||| |||| |||||||| ||||| |        ||| |||||| |  ||||||||||||||||||| |||| ||||| | ||    
T  34451511 ctcaaaataattgtcactttagaatatcaatgcaacatttaat---ttttcccagtattatgcctttatttattgaatttcatccaactaaactatttca 34451415  T
Q  263 ctaactacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaacacaattaatcattt 336  Q
     |||||| ||||||| |     |||||||||||  ||||||||||  |||  ||||||||| ||||||| ||||    
T  34451414 ataactagaattaatgaaaatattttagtaaataatactaattttctcatcgaaatcaacataattaataattt 34451341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 285 - 345
Target Start/End: Original strand, 38763604 - 38763664
Alignment:
Q  285 ttttagtaaatgttactaattttaccattaaaatcaacacaattaatcatttccttaataa 345  Q
    ||||||||||||  ||  |||||||||||||||||||||| | ||| ||||||||||||||    
T  38763604 ttttagtaaatgaaacacattttaccattaaaatcaacactactaaccatttccttaataa 38763664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 216 - 264
Target Start/End: Original strand, 45464009 - 45464057
Alignment:
Q  216 actattatactcttatttattgaatttcatcaaacttaactactccact 264  Q
    ||||||||||| ||||||||||||||||||| || ||||||||| ||||    
T  45464009 actattatacttttatttattgaatttcatctaatttaactacttcact 45464057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 271 - 334
Target Start/End: Original strand, 11367121 - 11367184
Alignment:
Q  271 aattaataatggagttttagtaaatgttactaattttaccattaaaatcaacacaattaatcat 334  Q
    ||||||||| ||  ||| ||||||||  | ||||||||| ||||||||||||||||||||||||    
T  11367121 aattaataaaggtatttaagtaaatgacattaattttacaattaaaatcaacacaattaatcat 11367184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 163 - 206
Target Start/End: Complemental strand, 34120700 - 34120657
Alignment:
Q  163 ctcaaaataattgtcactttacaataccaatgcaatatttatta 206  Q
    ||||||||||||||||||||| ||||||||||||  ||||||||    
T  34120700 ctcaaaataattgtcactttaaaataccaatgcagcatttatta 34120657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 167 - 205
Target Start/End: Original strand, 8928547 - 8928585
Alignment:
Q  167 aaataattgtcactttacaataccaatgcaatatttatt 205  Q
    ||||||||||||||||| |||||||||||| ||||||||    
T  8928547 aaataattgtcactttataataccaatgcagtatttatt 8928585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 261 - 309
Target Start/End: Original strand, 3601416 - 3601464
Alignment:
Q  261 cactaactacaattaataatggagttttagtaaatgttactaattttac 309  Q
    ||||||||||||||||||| || |||||||||||||  |||| ||||||    
T  3601416 cactaactacaattaataagggtgttttagtaaatgcaactatttttac 3601464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #71
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 23 - 79
Target Start/End: Original strand, 30166236 - 30166292
Alignment:
Q  23 aaaggccgcaattaagacgactaggggcgggccacaataaaagtggaagttccaaca 79  Q
    ||||| |||||||||| ||||||||||||| ||||||| || | |||| ||||||||    
T  30166236 aaaggtcgcaattaaggcgactaggggcggaccacaattaaggcggaatttccaaca 30166292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 125; Significance: 3e-64; HSPs: 83)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 163 - 391
Target Start/End: Original strand, 39482546 - 39482777
Alignment:
Q  163 ctcaaaataattgtcactttacaataccaatgcaatatttattannnnnnnccactattat---actcttatttattgaatttcatcaaacttaactact 259  Q
    |||||||||||||||||||||||||||||||||| |||||||||       ||||||||||   || |||||||||||||||||||   ||||||||| |    
T  39482546 ctcaaaataattgtcactttacaataccaatgcagtatttattattttttcccactattattatacccttatttattgaatttcattccacttaactagt 39482645  T
Q  260 ccactaactacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaacacaattaatcatttccttaataattgtgcacaaatct 359  Q
    |||||||||| ||||||||| || ||||||||||||  ||||||||||||| || |||||||||||||||||||||| ||||||||| ||||||||||||    
T  39482646 ccactaactataattaataagggtgttttagtaaattctactaattttacccttgaaatcaacacaattaatcattttcttaataatcgtgcacaaatct 39482745  T
Q  360 taaacgactaatattgtttgacggaggtagta 391  Q
    |||||||||||||||||  |||||||| ||||    
T  39482746 taaacgactaatattgtgagacggagggagta 39482777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 115 - 385
Target Start/End: Complemental strand, 21216330 - 21216061
Alignment:
Q  115 tactccattcgtctcacaattattgtttctttagcannnnnnnnnnnnctcaaaataattgtcactttacaataccaatgcaatatttatt-annnnnnn 213  Q
    ||||||||| |||||||||||||||| |||||||||            || |||||||||||||||||||||||||||||||| ||||||| |           
T  21216330 tactccatttgtctcacaattattgtctctttagcattttttctttttctgaaaataattgtcactttacaataccaatgcaacatttatttattttttt 21216231  T
Q  214 ccactattatactcttatttattgaatttcatcaaacttaactactccactaactacaattaataatggagttttagtaaatgttactaattttaccatt 313  Q
    | ||||||||||  ||  ||||||||||||||| |||||||||||||||||||||||||||||||| |  |||||||||||||  |||||||||||||||    
T  21216230 ctactattataccatt--ttattgaatttcatccaacttaactactccactaactacaattaataaggatgttttagtaaatgcaactaattttaccatt 21216133  T
Q  314 aaaatcaacacaattaatcatttccttaataattgtgcacaaatcttaaacgactaatattgtttgacggag 385  Q
     ||||||||||||||||||||||||||||||||  |||||||| ||||||||||| | |||||  |||||||    
T  21216132 gaaatcaacacaattaatcatttccttaataatcatgcacaaaccttaaacgactgacattgtgagacggag 21216061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 163 - 366
Target Start/End: Complemental strand, 34948867 - 34948666
Alignment:
Q  163 ctcaaaataattgtcactttacaataccaatgcaatatttattannnnnnnccactattatactcttatttattgaatttcatcaaacttaactactcca 262  Q
    |||||||||||||| |||||| ||||||||||||||||||||||       | | | |||||| |||||||||||||||||||| |||||||||||||||    
T  34948867 ctcaaaataattgttactttagaataccaatgcaatatttattatttttttc-attgttatac-cttatttattgaatttcatccaacttaactactcca 34948770  T
Q  263 ctaactacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaacacaattaatcatttccttaataattgtgcacaaatcttaa 362  Q
    |||||||||||||||||  | ||||  ||||||| |||||||||||| ||| |||||||||||||||||||||||||||||||||||| |||||||||||    
T  34948769 ctaactacaattaataaatgtgtttctgtaaatgatactaattttactatttaaatcaacacaattaatcatttccttaataattgtgtacaaatcttaa 34948670  T
Q  363 acga 366  Q
    ||||    
T  34948669 acga 34948666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 164 - 374
Target Start/End: Complemental strand, 45425848 - 45425637
Alignment:
Q  164 tcaaaataattgtcactttacaataccaatgcaatatttattannnnnnn-ccactattatactcttatttattgaatttcatcaaacttaactactcca 262  Q
    ||||||||||||||||||||||||| ||||| || ||||||||        |||||||||||| |||||||||||||||||||  ||||||| |||||||    
T  45425848 tcaaaataattgtcactttacaatatcaatgtaacatttattattttttttccactattatacccttatttattgaatttcatacaacttaattactcca 45425749  T
Q  263 ctaactacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaacacaattaatcatttccttaataattgtgcacaaatcttaa 362  Q
    |||||||||||||||||    |||||| ||||||||| |||||||||||||||||||||||||||||||||||| |||||||||  |||| ||| |||||    
T  45425748 ctaactacaattaataagaatgttttaataaatgttattaattttaccattaaaatcaacacaattaatcattttcttaataatcatgcataaaacttaa 45425649  T
Q  363 acgactaatatt 374  Q
    ||||||||||||    
T  45425648 acgactaatatt 45425637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 163 - 366
Target Start/End: Original strand, 13335151 - 13335353
Alignment:
Q  163 ctcaaaataattgtcactttacaataccaatgcaatatttattannnnnnnccactattatactcttatttattgaatttcatcaaacttaactactcca 262  Q
    ||||||||||||||||||||| ||||||||||||| ||||||||       ||| |||||||| || ||||||||||||||||||||||||||||||| |    
T  13335151 ctcaaaataattgtcactttagaataccaatgcaacatttattatttttt-ccattattataccctgatttattgaatttcatcaaacttaactactcta 13335249  T
Q  263 ctaactacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaacacaattaatcatttccttaataattgtgcacaaatcttaa 362  Q
    |||||| ||||||||||  | |||||| |||||| ||||||||||||||| ||||||||||||||||| ||||||||||||||| ||||| ||| |||||    
T  13335250 ctaactgcaattaataaatgtgttttactaaatgatactaattttaccatcaaaatcaacacaattaaccatttccttaataatcgtgcataaaccttaa 13335349  T
Q  363 acga 366  Q
    ||||    
T  13335350 acga 13335353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 163 - 339
Target Start/End: Complemental strand, 44761674 - 44761500
Alignment:
Q  163 ctcaaaataattgtcactttacaataccaatgcaatatttattannnnnnnccactattatactcttatttattgaatttcatcaaacttaactactcca 262  Q
    ||||||||||||||||||||||||||||||||||  ||  ||||       |||||||||||| || ||||||||||||||||| |||||||||||||||    
T  44761674 ctcaaaataattgtcactttacaataccaatgcagcat--attagttttttccactattataccctcatttattgaatttcatccaacttaactactcca 44761577  T
Q  263 ctaactacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaacacaattaatcatttcct 339  Q
    ||||||||||||||||| || ||||||||||||| |||||||||||||||| |||||||||||||||||||||||||    
T  44761576 ctaactacaattaataagggtgttttagtaaatgctactaattttaccattgaaatcaacacaattaatcatttcct 44761500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 163 - 364
Target Start/End: Complemental strand, 9300297 - 9300094
Alignment:
Q  163 ctcaaaataattgtcactttacaataccaatgcaatatttattannnnnnncc--actattatactcttatttattgaatttcatcaaacttaactactc 260  Q
    |||||||||||||||||||||||||||||||||| |||||||||       ||  |||||||||  |||||||||||||||||||  |||||||||||||    
T  9300297 ctcaaaataattgtcactttacaataccaatgcagtatttattatttctttccccactattatatccttatttattgaatttcattcaacttaactactc 9300198  T
Q  261 cactaactacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaacacaattaatcatttccttaataattgtgcacaaatctt 360  Q
    ||||||||| ||||||||| || ||||||||||||| || ||||||||||||||||||||||||||  |||||||| ||||||||| ||||| ||| |||    
T  9300197 cactaactaaaattaataagggtgttttagtaaatgctattaattttaccattaaaatcaacacaaacaatcattttcttaataatcgtgcataaacctt 9300098  T
Q  361 aaac 364  Q
    ||||    
T  9300097 aaac 9300094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 167 - 374
Target Start/End: Complemental strand, 17719436 - 17719229
Alignment:
Q  167 aaataattgtcactttacaataccaatgcaatatttattannnnnnnccactattatactcttatttattgaatttcatcaaacttaactactccactaa 266  Q
    ||||||||||||||||| ||||||||||||| ||||||||       ||| ||||||||  ||||||||| ||||||||| |||||||||||||||||||    
T  17719436 aaataattgtcactttagaataccaatgcaacatttattatctttttccattattatacctttatttattaaatttcatccaacttaactactccactaa 17719337  T
Q  267 ctacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaacacaattaatcatttccttaataattgtgcacaaatcttaaacga 366  Q
    ||| ||||||||| |   |||||||||||  |||||| ||||||||||||||||  ||||||||||||||  |||||||| |||||||||||||||||||    
T  17719336 ctataattaataaggatattttagtaaataatactaactttaccattaaaatcattacaattaatcatttttttaataatcgtgcacaaatcttaaacga 17719237  T
Q  367 ctaatatt 374  Q
    ||| ||||    
T  17719236 ctattatt 17719229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 163 - 366
Target Start/End: Complemental strand, 22772017 - 22771814
Alignment:
Q  163 ctcaaaataattgtcactttacaataccaatgcaatatttattannnnnnnccactattatactcttatttattgaatttcatcaaacttaactactcca 262  Q
    ||||||||||||||||||||| ||||||||||||| ||||||||        || |||||||| |||||||||||||||||||| ||| ||| |||| ||    
T  22772017 ctcaaaataattgtcactttagaataccaatgcaacatttattattacttttcattattatacccttatttattgaatttcatccaacataattacttca 22771918  T
Q  263 ctaactacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaacacaattaatcatttccttaataattgtgcacaaatcttaa 362  Q
    ||||||||||||||||| || |||||| ||||||  |||||||||||||| ||||||||| |||||||||| ||||||||||| |||||| ||| |||||    
T  22771917 ctaactacaattaataagggtgttttaataaatgacactaattttaccatcaaaatcaacccaattaatcaattccttaataactgtgcataaaccttaa 22771818  T
Q  363 acga 366  Q
    ||||    
T  22771817 acga 22771814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 166 - 391
Target Start/End: Complemental strand, 11977115 - 11976890
Alignment:
Q  166 aaaataattgtcactttacaataccaatgcaatatttattannnnnnnccactattatactcttatttattgaatttcatcaaacttaactactccacta 265  Q
    ||||||||||||| |||||||||| |||| |  ||||||||       || |||||||||  ||||||||||||||||||| ||||||||||||| ||||    
T  11977115 aaaataattgtcattttacaatactaatgtagcatttattatttttttccgctattatacctttatttattgaatttcatctaacttaactactctacta 11977016  T
Q  266 actacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaacacaattaatcatttccttaataattgtgcacaaatcttaaacg 365  Q
    |||||||||||||| ||  |||||||||||| |||| ||| ||||||| ||||||||||||||||| |||||| |||||||  |||||||| ||||||||    
T  11977015 actacaattaataagggtattttagtaaatgctactgattataccattgaaatcaacacaattaatgatttccataataatcatgcacaaaccttaaacg 11976916  T
Q  366 actaatattgtttgacggaggtagta 391  Q
    ||||||||| |  |||||||| ||||    
T  11976915 actaatattatgagacggagggagta 11976890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 164 - 376
Target Start/End: Original strand, 39405697 - 39405909
Alignment:
Q  164 tcaaaataattgtcactttacaataccaatgcaatatttattannnnnnnccactattatactcttatttattgaatttcatcaaacttaactactccac 263  Q
    |||||||||||||||||||| |||| |||||||  ||||||||        ||||||||||| |||||||||| ||||||||  ||||||| ||||||||    
T  39405697 tcaaaataattgtcactttagaatatcaatgcagcatttattattatttttcactattatacccttatttatttaatttcattcaacttaattactccac 39405796  T
Q  264 taactacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaacacaattaatcatttccttaataattgtgcacaaatcttaaa 363  Q
    |||||  ||||||||| |   || ||||||||| ||||||||||| |||| |||| ||||||||||||||||||||||||||| ||||||||| ||||||    
T  39405797 taactgtaattaataaagatattatagtaaatgatactaattttatcattgaaattaacacaattaatcatttccttaataatcgtgcacaaaccttaaa 39405896  T
Q  364 cgactaatattgt 376  Q
    |||||||||||||    
T  39405897 cgactaatattgt 39405909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 166 - 369
Target Start/End: Complemental strand, 10180126 - 10179923
Alignment:
Q  166 aaaataattgtcactttacaataccaatgcaatatttattannnnnnnccactattatactcttatttattgaatttcatcaaacttaactactccacta 265  Q
    |||||||||||||||||| ||||||||||||| ||||||||       | | |||||||| |||||| ||||||||||||  ||||||||||||||||||    
T  10180126 aaaataattgtcactttagaataccaatgcaacatttattattattttctattattatacacttattaattgaatttcattcaacttaactactccacta 10180027  T
Q  266 actacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaacacaattaatcatttccttaataattgtgcacaaatcttaaacg 365  Q
    ||||||||||||||  |  |||||||||||  |||||||||||||||| ||||||| |||| || |||||| ||||||||| ||||||||| ||||||||    
T  10180026 actacaattaataagtgtattttagtaaattatactaattttaccattgaaatcaatacaactactcattttcttaataatcgtgcacaaaccttaaacg 10179927  T
Q  366 acta 369  Q
    ||||    
T  10179926 acta 10179923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 163 - 342
Target Start/End: Complemental strand, 5053334 - 5053156
Alignment:
Q  163 ctcaaaataattgtcactttacaataccaatgcaatatttattannnnnnnccactattatactcttatttattgaatttcatcaaacttaactactcca 262  Q
    ||||||||||||||||||||| |||| |||||||| |||||||        ||| ||||||||||||||||||||||| ||||| || |||||||||||     
T  5053334 ctcaaaataattgtcactttaaaatatcaatgcaacatttatt-tttttccccattattatactcttatttattgaatctcatccaatttaactactccg 5053236  T
Q  263 ctaactacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaacacaattaatcatttccttaa 342  Q
    |||||||||||||||||    ||||||||||||| || |||||||||||| |||||||||||||||||||||||||||||    
T  5053235 ctaactacaattaataagactgttttagtaaatgatattaattttaccatcaaaatcaacacaattaatcatttccttaa 5053156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 218 - 376
Target Start/End: Original strand, 31082608 - 31082766
Alignment:
Q  218 tattatactcttatttattgaatttcatcaaacttaactactccactaactacaattaataatggagttttagtaaatgttactaattttaccattaaaa 317  Q
    ||||||||  ||||||||| ||||||||| |||||||||||||||||||||| ||||||||| || ||||||||||||   |||||||||| ||||||||    
T  31082608 tattatacctttatttattaaatttcatccaacttaactactccactaactataattaataagggtgttttagtaaataccactaattttatcattaaaa 31082707  T
Q  318 tcaacacaattaatcatttccttaataattgtgcacaaatcttaaacgactaatattgt 376  Q
    |||| ||||||||||||||||||||| || ||||||||| | ||||| |||||||||||    
T  31082708 tcaagacaattaatcatttccttaattatcgtgcacaaaccataaacaactaatattgt 31082766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 252 - 373
Target Start/End: Complemental strand, 1875685 - 1875564
Alignment:
Q  252 taactactccactaactacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaacacaattaatcatttccttaataattgtgc 351  Q
    |||||| | ||||||||||||||||||| || ||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||| ||||    
T  1875685 taactatttcactaactacaattaataagggtgttttagtaaatgctactaattttaccattgaaatcaacacaattaatcatttccttaataatcgtgc 1875586  T
Q  352 acaaatcttaaacgactaatat 373  Q
    ||||| ||||||||||||||||    
T  1875585 acaaaccttaaacgactaatat 1875564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 163 - 369
Target Start/End: Complemental strand, 26626294 - 26626088
Alignment:
Q  163 ctcaaaataattgtcactttacaataccaatgcaatatttattannnnnnnccactattatactcttatttattgaatttcatcaaacttaactactcca 262  Q
    ||||||||||||||||||||| |||| |||||||  ||||||||       ||| |||||||| |||||||||||||||||||  |||   |||||||||    
T  26626294 ctcaaaataattgtcactttaaaatatcaatgcagcatttattattttttcccattattatacccttatttattgaatttcattcaaccggactactcca 26626195  T
Q  263 ctaactacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaacacaattaatcatttccttaataattgtgcacaaatcttaa 362  Q
    ||||||||||||||||| |   ||||| |||||  ||| ||||||||||| ||| ||||||||||||||||||||||||||||| ||||| ||| |||||    
T  26626194 ctaactacaattaataaggatattttaataaattatacaaattttaccatcaaattcaacacaattaatcatttccttaataatcgtgcataaaccttaa 26626095  T
Q  363 acgacta 369  Q
    |||||||    
T  26626094 acgacta 26626088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 166 - 345
Target Start/End: Original strand, 31231667 - 31231846
Alignment:
Q  166 aaaataattgtcactttacaataccaatgcaatatttattannnnnnnccactattatactcttatttattgaatttcatcaaacttaactactccacta 265  Q
    ||||||||||||| |||| ||||||||||||  ||||||||       ||| ||| |||| ||||||||||||| || ||| ||||||||||||||||||    
T  31231667 aaaataattgtcattttataataccaatgcatcatttattatttttttccattataatacccttatttattgaactttatccaacttaactactccacta 31231766  T
Q  266 actacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaacacaattaatcatttccttaataa 345  Q
    |||||||||||||| || |||| |||||||| || |||||||||||| |||||| |||||||| ||||||||||||||||    
T  31231767 actacaattaataagggtgtttcagtaaatgatattaattttaccatcaaaatcgacacaattcatcatttccttaataa 31231846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 166 - 374
Target Start/End: Complemental strand, 34394137 - 34393925
Alignment:
Q  166 aaaataattgtcactttacaataccaatgcaatatttattannnnnnnccactattatactcttatttattgaatttcatcaaacttaactactccacta 265  Q
    |||||||||||||||||| ||||||||||||  ||||||||       ||| ||  |||||||||||||||||| || ||| ||||||||||||||||||    
T  34394137 aaaataattgtcactttaaaataccaatgcataatttattaactttttccattacaatactcttatttattgaactttatccaacttaactactccacta 34394038  T
Q  266 ----actacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaacacaattaatcatttccttaataattgtgcacaaatctta 361  Q
        |||| ||||||||| || ||||||||||||  ||||||||||||||| ||||||||||||||||||||||||||||||||  |||||  ||  |||    
T  34394037 gttaactataattaataaaggtgttttagtaaattatactaattttaccatcaaaatcaacacaattaatcatttccttaataaccgtgcatcaacttta 34393938  T
Q  362 aacgactaatatt 374  Q
    |||||||| ||||    
T  34393937 aacgactattatt 34393925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 163 - 342
Target Start/End: Complemental strand, 4428531 - 4428354
Alignment:
Q  163 ctcaaaataattgtcactttacaataccaatgcaatatttattannnnnnnccactattatactcttatttattgaatttcatcaaacttaactactcca 262  Q
    ||||||||||||||||||||| |||| ||||| || | ||||||       ||||||||||||| ||||||||||||||||||| |||||||||| | ||    
T  4428531 ctcaaaataattgtcactttagaatatcaatgtaacaattattattttt--ccactattatacttttatttattgaatttcatctaacttaactaattca 4428434  T
Q  263 ctaactacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaacacaattaatcatttccttaa 342  Q
    |||||||||||||||||| |  |||||||||||| || |||||||| ||||||||||||||||| ||||||||| |||||    
T  4428433 ctaactacaattaataattgtattttagtaaatgataataattttatcattaaaatcaacacaaataatcattttcttaa 4428354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 221 - 369
Target Start/End: Original strand, 31271013 - 31271161
Alignment:
Q  221 tatactcttatttattgaatttcatcaaacttaactactccactaactacaattaataatggagttttagtaaatgttactaattttaccattaaaatca 320  Q
    ||||| |||||||||||||||| ||| |||||||||||||||||||||| |||||||||  |  |||||||| ||| || ||||||||||||||||||||    
T  31271013 tatacccttatttattgaattttatccaacttaactactccactaactataattaataagagtattttagtatatgatattaattttaccattaaaatca 31271112  T
Q  321 acacaattaatcatttccttaataattgtgcacaaatcttaaacgacta 369  Q
    ||||||| |||||||| ||||||||| || |||||| ||||||||||||    
T  31271113 acacaatcaatcattttcttaataatcgtacacaaaccttaaacgacta 31271161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 214 - 369
Target Start/End: Original strand, 7172899 - 7173054
Alignment:
Q  214 ccactattatactcttatttattgaatttcatcaaacttaactactccactaactacaattaataatggagttttagtaaatgttactaattttaccatt 313  Q
    |||||||||||| |||||||||||||||||||  |||||||||||| || ||||||||||||||||    ||||||||||||| ||||||||||| ||||    
T  7172899 ccactattatacccttatttattgaatttcattcaacttaactacttcattaactacaattaataaatatgttttagtaaatgctactaattttatcatt 7172998  T
Q  314 aaaatcaacacaattaatcatttccttaataattgtgcacaaatcttaaacgacta 369  Q
     ||||||||||||||||||||||| ||||||||  | |||||| ||||||| ||||    
T  7172999 gaaatcaacacaattaatcatttctttaataatgatacacaaaccttaaacaacta 7173054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 227 - 366
Target Start/End: Complemental strand, 40996483 - 40996344
Alignment:
Q  227 cttatttattgaatttcatcaaacttaactactccactaactacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaacacaa 326  Q
    |||||||||||||||||||| |||||||| | | ||||||||||||||||||| || |||||||||||||  |||||||||||  | |||||||||||||    
T  40996483 cttatttattgaatttcatccaacttaaccatttcactaactacaattaataagggtgttttagtaaatgaaactaattttacattcaaaatcaacacaa 40996384  T
Q  327 ttaatcatttccttaataattgtgcacaaatcttaaacga 366  Q
    |||||||||||||||| ||||||||| ||| |||||||||    
T  40996383 ttaatcatttccttaacaattgtgcataaaccttaaacga 40996344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 163 - 369
Target Start/End: Original strand, 17823856 - 17824060
Alignment:
Q  163 ctcaaaataattgtcactttacaataccaatgcaatatttattannnnnnnccactattatactcttatttattgaatttcatcaaacttaactactcca 262  Q
    |||||||||||||||| |||| |||| |||| ||||||||||||       ||||||||||||| ||||||||| ||||||||| |||||||||||| ||    
T  17823856 ctcaaaataattgtcaatttataataacaatacaatatttattatttcct-ccactattatactattatttatttaatttcatccaacttaactacttca 17823954  T
Q  263 ctaactacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaacacaattaatcatttccttaataattgtgcacaaatcttaa 362  Q
    ||||||||||||||||| ||  || ||||||| | ||||||||||| |||| |||||||||| ||||| | ||||||||| |||  | |||||| |||||    
T  17823955 ctaactacaattaataaaggtattctagtaaaagatactaattttatcattgaaatcaacacgattaa-cttttccttaaaaataatacacaaaccttaa 17824053  T
Q  363 acgacta 369  Q
    |||||||    
T  17824054 acgacta 17824060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 220 - 368
Target Start/End: Original strand, 32476278 - 32476426
Alignment:
Q  220 ttatactcttatttattgaatttcatcaaacttaactactccactaactacaattaataatggagttttagtaaatgttactaattttaccattaaaatc 319  Q
    |||||| ||||||||||||||||||||||||||||||||| || |||||||||||||||| ||  ||||| |||||| || |||||||| |||| |||||    
T  32476278 ttatacccttatttattgaatttcatcaaacttaactacttcattaactacaattaataagggtattttaataaatgatattaattttatcattgaaatc 32476377  T
Q  320 aacacaattaatcatttccttaataattgtgcacaaatcttaaacgact 368  Q
    |||| ||| |||||||| ||||||||  ||||||||| |||||||||||    
T  32476378 aacagaatcaatcattttcttaataaccgtgcacaaaccttaaacgact 32476426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 166 - 363
Target Start/End: Complemental strand, 14855115 - 14854916
Alignment:
Q  166 aaaataattgtcactttacaataccaatgcaatatttattannnnnnn--ccactattatactcttatttattgaatttcatcaaacttaactactccac 263  Q
    |||||||||||||||||||||||  ||||||||||||||||         ||||||||||||  || |||||||||||||||  | | ||||||||||||    
T  14855115 aaaataattgtcactttacaatattaatgcaatatttattatttttttttccactattataccattctttattgaatttcattcagcctaactactccac 14855016  T
Q  264 taactacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaacacaattaatcatttccttaataattgtgcacaaatcttaaa 363  Q
    |||||||||||||||| || ||||||| |||||  | ||||||||||||||||||||||||||| | |||||| ||| ||||| ||| ||||| ||||||    
T  14855015 taactacaattaataaaggtgttttagcaaatgcaattaattttaccattaaaatcaacacaatgattcattttcttgataatcgtgtacaaaccttaaa 14854916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 228 - 374
Target Start/End: Complemental strand, 10098108 - 10097962
Alignment:
Q  228 ttatttattgaatttcatcaaacttaactactccactaactacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaacacaat 327  Q
    |||||||||||| |||||| |||||||||||||||||||||||||||||||| || ||| ||||||||| || |||||||||||| |||||||| |||||    
T  10098108 ttatttattgaacttcatccaacttaactactccactaactacaattaataagggtgttatagtaaatgatattaattttaccatcaaaatcaatacaat 10098009  T
Q  328 taatcatttccttaataattgtgcacaaatcttaaacgactaatatt 374  Q
    ||||||||| ||||||||   ||||  || |||||||||||| ||||    
T  10098008 taatcattttcttaataaccatgcatcaaccttaaacgactattatt 10097962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 166 - 345
Target Start/End: Complemental strand, 396790 - 396611
Alignment:
Q  166 aaaataattgtcactttacaataccaatgcaatatttattannnnnnnccactattatactcttatttattgaatttcatcaaacttaactactccacta 265  Q
    |||||||||||||||||| ||||||||||||| ||||||||        || |||||||| |||||| ||||||||| ||| ||  |||||||| || ||    
T  396790 aaaataattgtcactttagaataccaatgcaacatttattattatttttcattattatacccttattaattgaattttatccaatataactacttcatta 396691  T
Q  266 actacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaacacaattaatcatttccttaataa 345  Q
    |||||||||||||| |   || ||||||||| ||||||||||||| || ||||||||| |||||||||||||||||||||    
T  396690 actacaattaataaggatattgtagtaaatgatactaattttaccgttgaaatcaacataattaatcatttccttaataa 396611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 219 - 333
Target Start/End: Original strand, 42886990 - 42887104
Alignment:
Q  219 attatactcttatttattgaatttcatcaaacttaactactccactaactacaattaataatggagttttagtaaatgttactaattttaccattaaaat 318  Q
    |||||||||||||||||||||||| ||| ||||||||||| |||||||||||||||||||| ||  |||||||||||| |||||||||| | ||| ||||    
T  42886990 attatactcttatttattgaattttatccaacttaactacgccactaactacaattaataaaggtattttagtaaatgatactaattttgctattgaaat 42887089  T
Q  319 caacacaattaatca 333  Q
    |||||||||||||||    
T  42887090 caacacaattaatca 42887104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 167 - 345
Target Start/End: Complemental strand, 2767475 - 2767291
Alignment:
Q  167 aaataattgtcactttacaataccaatgcaatatttattannnnnnnccactattatactcttatttattgaatttcatcaaacttaactactc------ 260  Q
    ||||||||||||||||| ||||| ||| ||| ||||||||       ||| ||| |||| ||||||||||||| || ||| |||||||||||||          
T  2767475 aaataattgtcactttagaatactaatacaacatttattacttttttccaatataatacccttatttattgaacttaatccaacttaactactcatcctc 2767376  T
Q  261 cactaactacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaacacaattaatcatttccttaataa 345  Q
    |||||||||||| |||||| |  |||||| |||||| ||||||||||||||| |||||||||||||||||| |||||||||||||    
T  2767375 cactaactacaaataataaggatgttttaataaatgatactaattttaccatcaaaatcaacacaattaattatttccttaataa 2767291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 248 - 374
Target Start/End: Original strand, 51132 - 51257
Alignment:
Q  248 aacttaactactccactaactacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaacacaattaatcatttccttaataatt 347  Q
    ||||||| || |||||||||||||||||||||  | ||||| ||||||| |||| ||||||| |||||||||||||||||||||||||| |||||||||     
T  51132 aacttaattaatccactaactacaattaataaatgtgtttttgtaaatgatacttattttac-attaaaatcaacacaattaatcattttcttaataatc 51230  T
Q  348 gtgcacaaatcttaaacgactaatatt 374  Q
    ||||||||| ||||||| |||| ||||    
T  51231 gtgcacaaaccttaaacaactattatt 51257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 226 - 363
Target Start/End: Complemental strand, 42972630 - 42972490
Alignment:
Q  226 tcttatttattgaatttcatcaaacttaactac---tccactaactacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaac 322  Q
    |||| |||||||||||||||  |||||||||||   ||||||||||| ||||||||| ||  |||||||||| | || ||||||||||||| |||||||     
T  42972630 tcttgtttattgaatttcattcaacttaactacgtctccactaactataattaataagggtattttagtaaacgatattaattttaccattgaaatcaaa 42972531  T
Q  323 acaattaatcatttccttaataattgtgcacaaatcttaaa 363  Q
    |||||||||||||| ||||||||| ||||||||| ||||||    
T  42972530 acaattaatcattttcttaataatcgtgcacaaaccttaaa 42972490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 284 - 374
Target Start/End: Original strand, 36967416 - 36967506
Alignment:
Q  284 gttttagtaaatgttactaattttaccattaaaatcaacacaattaatcatttccttaataattgtgcacaaatcttaaacgactaatatt 374  Q
    ||||||||||||| || |||||||||||| ||||||||||||||||||||||||||||||||| ||||| ||| |||||||||||| ||||    
T  36967416 gttttagtaaatgatattaattttaccatcaaaatcaacacaattaatcatttccttaataatcgtgcataaaccttaaacgactattatt 36967506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 215 - 331
Target Start/End: Complemental strand, 36007017 - 36006901
Alignment:
Q  215 cactattatactcttatttattgaatttcatcaaacttaactactccactaactacaattaataatggagttttagtaaatgttactaattttaccatta 314  Q
    ||||||||| |||||||||||||||||||||||||||||| ||| |||||||||||||||||||  |   ||||||| |||  || |||||||| |||||    
T  36007017 cactattatgctcttatttattgaatttcatcaaacttaattaccccactaactacaattaatagggatattttagtcaataatattaattttatcatta 36006918  T
Q  315 aaatcaacacaattaat 331  Q
    |||||||||||| ||||    
T  36006917 aaatcaacacaactaat 36006901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 228 - 362
Target Start/End: Complemental strand, 27294176 - 27294042
Alignment:
Q  228 ttatttattgaatttcatcaaacttaactactccactaactacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaacacaat 327  Q
    ||||||||||||||||||| ||||||| ||||||||||||| ||||||||||     |||||||||| | ||||||||||| |||| |||| ||||||||    
T  27294176 ttatttattgaatttcatccaacttaattactccactaactgcaattaataaatatattttagtaaaagatactaattttatcattcaaatgaacacaat 27294077  T
Q  328 taatcatttccttaataattgtgcacaaatcttaa 362  Q
    |||| | ||| |||| ||| ||||||||| |||||    
T  27294076 taataacttctttaaaaatcgtgcacaaaccttaa 27294042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 163 - 374
Target Start/End: Complemental strand, 39301138 - 39300912
Alignment:
Q  163 ctcaaaataattgtcactttacaataccaatgcaatatttattannnnnnnccactattatactcttatttattgaatttcatcaaacttaactactcca 262  Q
    |||||||||||||||| |||| |||| ||||| |   |||||||       ||| ||||||||| ||||||||||||||||||  |||| ||||||| ||    
T  39301138 ctcaaaataattgtcattttagaatatcaatgaatcgtttattattattttccattattatacttttatttattgaatttcattcaactgaactacttca 39301039  T
Q  263 ctaactacaattaataatgg-----------ag----ttttagtaaatgttactaattttaccattaaaatcaacacaattaatcatttccttaataatt 347  Q
    ||||||||||||||||| ||           ||    |||||||||||| || ||||||||||||  ||||||||| ||||||||||||| ||||||||     
T  39301038 ctaactacaattaataagggtacaattaattagggttttttagtaaatgatattaattttaccatcgaaatcaacataattaatcatttctttaataatc 39300939  T
Q  348 gtgcacaaatcttaaacgactaatatt 374  Q
    || ||||||||||||||||||| ||||    
T  39300938 gtacacaaatcttaaacgactactatt 39300912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 218 - 301
Target Start/End: Original strand, 32678392 - 32678475
Alignment:
Q  218 tattatactcttatttattgaatttcatcaaacttaactactccactaactacaattaataatggagttttagtaaatgttact 301  Q
    ||||||| ||||||||||| ||||||||| |||||||||||||||||||||||||||||||| |  ||||||||||||| ||||    
T  32678392 tattatattcttatttatttaatttcatccaacttaactactccactaactacaattaataaggatgttttagtaaatgatact 32678475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 298 - 376
Target Start/End: Original strand, 1739709 - 1739787
Alignment:
Q  298 tactaattttaccattaaaatcaacacaattaatcatttccttaataattgtgcacaaatcttaaacgactaatattgt 376  Q
    |||||||||||||||| ||||||||||||||||| |||||||||||||| || |||||| |||| ||||||||||||||    
T  1739709 tactaattttaccattgaaatcaacacaattaattatttccttaataatcgtacacaaaccttagacgactaatattgt 1739787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 163 - 296
Target Start/End: Complemental strand, 10953914 - 10953787
Alignment:
Q  163 ctcaaaataattgtcactttacaataccaatgcaatatttattannnnnnnccactattatactcttatttattgaatttcatcaaacttaactactcca 262  Q
    |||||||||||||||||||||| |||||||||||| ||||||||        || |||||||| ||||| |||||||||| ||| |||||||||||||||    
T  10953914 ctcaaaataattgtcactttacgataccaatgcaacatttattattttt---cattattatacccttatatattgaatttgatctaacttaactactcca 10953818  T
Q  263 ctaactacaattaataatggagttttagtaaatg 296  Q
    |||   ||||||||||| || |||||||||||||    
T  10953817 cta---acaattaataagggtgttttagtaaatg 10953787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 163 - 296
Target Start/End: Complemental strand, 10961919 - 10961792
Alignment:
Q  163 ctcaaaataattgtcactttacaataccaatgcaatatttattannnnnnnccactattatactcttatttattgaatttcatcaaacttaactactcca 262  Q
    |||||||||||||||||||||| |||||||||||| ||||||||        || |||||||| ||||| |||||||||| ||| |||||||||||||||    
T  10961919 ctcaaaataattgtcactttacgataccaatgcaacatttattattttt---cattattatacccttatatattgaatttgatctaacttaactactcca 10961823  T
Q  263 ctaactacaattaataatggagttttagtaaatg 296  Q
    |||   ||||||||||| || |||||||||||||    
T  10961822 cta---acaattaataagggtgttttagtaaatg 10961792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 164 - 279
Target Start/End: Complemental strand, 29226708 - 29226594
Alignment:
Q  164 tcaaaataattgtcactttacaataccaatgcaatatttattannnnnnnccactattatactcttatttattgaatttcatcaaacttaactactccac 263  Q
    |||||||||||||||||||| |||| |||||||  ||||||||       | | |||| ||| |||||||||||||||||||| ||||||||||||||||    
T  29226708 tcaaaataattgtcactttaaaatatcaatgcagcatttattatatttttc-attattgtacccttatttattgaatttcatctaacttaactactccac 29226610  T
Q  264 taactacaattaataa 279  Q
    ||||||||||||||||    
T  29226609 taactacaattaataa 29226594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 226 - 339
Target Start/End: Original strand, 5356597 - 5356709
Alignment:
Q  226 tcttatttattgaatttcatcaaacttaactactccactaactacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaacaca 325  Q
    |||| |||||||||||||||| ||||||| || |||| |||||||||||||||| | |   |||||||||| || |||||||| ||||||||||||||||    
T  5356597 tcttttttattgaatttcatccaacttaattattccattaactacaattaataaagta-cattagtaaatgatattaattttatcattaaaatcaacaca 5356695  T
Q  326 attaatcatttcct 339  Q
    | ||||||||||||    
T  5356696 actaatcatttcct 5356709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 218 - 336
Target Start/End: Original strand, 40028501 - 40028623
Alignment:
Q  218 tattatactcttatttattgaatttcatcaaacttaactactccactaacta----caattaataatggagttttagtaaatgttactaattttaccatt 313  Q
    ||||||| |||| |||||||||||||||| ||||||| |||| |||||||||    ||||||||||||   ||||| |||||| || |||||||||||||    
T  40028501 tattatattcttgtttattgaatttcatctaacttaattacttcactaactaaatacaattaataatgatattttaataaatgctattaattttaccatt 40028600  T
Q  314 aaaatcaacacaattaatcattt 336  Q
     ||||||||| ||||||||||||    
T  40028601 gaaatcaacataattaatcattt 40028623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 215 - 356
Target Start/End: Original strand, 41091981 - 41092121
Alignment:
Q  215 cactattatactcttatttattgaatttcatcaaacttaactactccactaactacaattaataatggagttttagtaaatgttactaattttaccatta 314  Q
    ||||||||||| ||||||||||||||| ||| |||||||| || |   |||||||||||||||||  |  ||||| |||||| || |||||||||||||     
T  41091981 cactattatacccttatttattgaattacat-aaacttaaatatttttctaactacaattaataagagtattttaataaatgatattaattttaccattg 41092079  T
Q  315 aaatcaacacaattaatcatttccttaataattgtgcacaaa 356  Q
    |||||||||||||||||| |||| |||| ||| || ||||||    
T  41092080 aaatcaacacaattaatcgtttctttaaaaatcgttcacaaa 41092121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 215 - 342
Target Start/End: Complemental strand, 4924197 - 4924070
Alignment:
Q  215 cactattatactcttatttattgaatttcatcaaacttaactactccactaactacaattaataatggagttttagtaaatgttactaattttaccatta 314  Q
    ||||| ||||| |||||||||| | ||||||  ||||||||||||| | |||||||||||||||| |   |||||||||||  |||||||||||||||||    
T  4924197 cactaatatacccttatttattaagtttcattcaacttaactactctattaactacaattaataaagatattttagtaaataatactaattttaccatta 4924098  T
Q  315 aaatcaacacaattaatcatttccttaa 342  Q
    ||||  |||||| |||| |||| |||||    
T  4924097 aaatatacacaactaataattttcttaa 4924070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 232 - 363
Target Start/End: Original strand, 33765663 - 33765794
Alignment:
Q  232 ttattgaatttcatcaaacttaactactccactaactacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaacacaattaat 331  Q
    ||||||||||||| | || ||| ||  | ||| |||||||||||||||  |  | |||||||||| || ||||||||  ||||||||||||| |||||||    
T  33765663 ttattgaatttcacccaatttatctgattcaccaactacaattaataaaagtatattagtaaatgatagtaattttagtattaaaatcaacataattaat 33765762  T
Q  332 catttccttaataattgtgcacaaatcttaaa 363  Q
    ||||||||||| ||||||||||||| ||||||    
T  33765763 catttccttaaaaattgtgcacaaaccttaaa 33765794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 271 - 369
Target Start/End: Complemental strand, 7703230 - 7703132
Alignment:
Q  271 aattaataatggagttttagtaaatgttactaattttaccattaaaatcaacacaattaatcatttccttaataattgtgcacaaatcttaaacgacta 369  Q
    ||||||||| ||  |||||||||||| || ||||||||||||| ||||||||||||||||| ||||||||||||||  | ||||||  |||||||||||    
T  7703230 aattaataagggtattttagtaaatgatattaattttaccattgaaatcaacacaattaattatttccttaataatcttacacaaactttaaacgacta 7703132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 298 - 364
Target Start/End: Complemental strand, 29226278 - 29226212
Alignment:
Q  298 tactaattttaccattaaaatcaacacaattaatcatttccttaataattgtgcacaaatcttaaac 364  Q
    ||||||||||||||| ||||||||||||||||||||||| |||||||||| |||| |||||||||||    
T  29226278 tactaattttaccatcaaaatcaacacaattaatcattttcttaataattatgcataaatcttaaac 29226212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 240 - 342
Target Start/End: Original strand, 31331419 - 31331521
Alignment:
Q  240 tttcatcaaacttaactactccactaactacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaacacaattaatcatttcct 339  Q
    ||||||| ||||||| |||| |||||||||||||||||||||   |||||||||||  || ||||||||  ||| ||||||| |||||||||||||||||    
T  31331419 tttcatccaacttaattacttcactaactacaattaataatgatattttagtaaataataataattttataattgaaatcaatacaattaatcatttcct 31331518  T
Q  340 taa 342  Q
    |||    
T  31331519 taa 31331521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 163 - 318
Target Start/End: Complemental strand, 39466219 - 39466064
Alignment:
Q  163 ctcaaaataattgtcactttacaataccaatgcaatatttattannnnnnnccactattatactcttatttattgaatttcatcaaactt-aactactcc 261  Q
    |||||||||||| ||||||||||||||| || ||| ||||||||       | |||||||||  |||||||||||||||| ||| || || ||||||| |    
T  39466219 ctcaaaataattatcactttacaataccgatacaacatttattatttttttc-actattatatccttatttattgaattttatccaattttaactactgc 39466121  T
Q  262 actaactacaattaataatggagttttagtaaatgttactaattttaccattaaaat 318  Q
    |||||| || |||||||| |   |||||||||||| ||||||||||| |||||||||    
T  39466120 actaaccacgattaataaagatattttagtaaatgatactaattttagcattaaaat 39466064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 299 - 376
Target Start/End: Original strand, 6611767 - 6611844
Alignment:
Q  299 actaattttaccattaaaatcaacacaattaatcatttccttaataattgtgcacaaatcttaaacgactaatattgt 376  Q
    ||||||||||||||| ||||||||| ||||||||||||  |||||||| |||   |||||||||||||||||||||||    
T  6611767 actaattttaccattgaaatcaacataattaatcatttttttaataatcgtgtgtaaatcttaaacgactaatattgt 6611844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 168 - 253
Target Start/End: Complemental strand, 1875916 - 1875831
Alignment:
Q  168 aataattgtcactttacaataccaatgcaatatttattannnnnnnccactattatactcttatttattgaatttcatcaaactta 253  Q
    |||||||||||||||||||||||||||||| ||||||||       |||||| ||||| |||||||||| |||||||| |||||||    
T  1875916 aataattgtcactttacaataccaatgcaacatttattacttttttccactagtatacccttatttattaaatttcataaaactta 1875831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 298 - 374
Target Start/End: Original strand, 32678787 - 32678863
Alignment:
Q  298 tactaattttaccattaaaatcaacacaattaatcatttccttaataattgtgcacaaatcttaaacgactaatatt 374  Q
    ||||| ||||||||| ||||||||||||||||||||||||||||||||| ||| | |||  ||||||||||| ||||    
T  32678787 tactagttttaccatcaaaatcaacacaattaatcatttccttaataatcgtgtataaactttaaacgactattatt 32678863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 218 - 278
Target Start/End: Original strand, 35732110 - 35732170
Alignment:
Q  218 tattatactcttatttattgaatttcatcaaacttaactactccactaactacaattaata 278  Q
    |||||||||||||| |||||||||||||| ||||| ||||||||||||| |||||||||||    
T  35732110 tattatactcttatatattgaatttcatctaactttactactccactaattacaattaata 35732170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 252 - 344
Target Start/End: Complemental strand, 3117111 - 3117021
Alignment:
Q  252 taactactccactaactacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaacacaattaatcatttccttaata 344  Q
    ||||||||||| |||||| |||||| || || |||||||||||||  ||  ||||||||||| |||||||||| |||||||||||| ||||||    
T  3117111 taactactccattaactataattaacaagggtgttttagtaaatgacac--attttaccattgaaatcaacactattaatcatttcgttaata 3117021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 289 - 346
Target Start/End: Complemental strand, 10953464 - 10953407
Alignment:
Q  289 agtaaatgttactaattttaccattaaaatcaacacaattaatcatttccttaataat 346  Q
    |||||||| || ||||| || |||||||||||||||||||||||||||||||||||||    
T  10953464 agtaaatgctattaattatatcattaaaatcaacacaattaatcatttccttaataat 10953407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 289 - 346
Target Start/End: Complemental strand, 10961469 - 10961412
Alignment:
Q  289 agtaaatgttactaattttaccattaaaatcaacacaattaatcatttccttaataat 346  Q
    |||||||| || ||||| || |||||||||||||||||||||||||||||||||||||    
T  10961469 agtaaatgctattaattatatcattaaaatcaacacaattaatcatttccttaataat 10961412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 298 - 363
Target Start/End: Original strand, 39329088 - 39329153
Alignment:
Q  298 tactaattttaccattaaaatcaacacaattaatcatttccttaataattgtgcacaaatcttaaa 363  Q
    ||||||||||| ||||||||| ||||||||||||||||| ||||| |||||| |||||| ||||||    
T  39329088 tactaattttatcattaaaattaacacaattaatcattttcttaaaaattgtacacaaaacttaaa 39329153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 216 - 336
Target Start/End: Complemental strand, 43719365 - 43719244
Alignment:
Q  216 actattatactcttatttattgaatttcatcaaacttaactactccactaactacaattaataatggagttttagtaaatgtta-ctaattttaccatta 314  Q
    ||||||||||  ||||||||||||||||||| ||||||| || || |||||||| |||||||||||   ||||| ||||||  | |||||||||  ||||    
T  43719365 actattatacctttatttattgaatttcatccaacttaattattcaactaactataattaataatgttattttaataaatgacacctaattttataatta 43719266  T
Q  315 aaatcaacacaattaatcattt 336  Q
    ||||||| | ||||||| ||||    
T  43719265 aaatcaatataattaataattt 43719244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 215 - 279
Target Start/End: Original strand, 1739529 - 1739593
Alignment:
Q  215 cactattatactcttatttattgaatttcatcaaacttaactactccactaactacaattaataa 279  Q
    |||| |||||| |||||||||| |||||||||||| |||||||||  ||||||||||||||||||    
T  1739529 cacttttatacccttatttattaaatttcatcaaaattaactacttaactaactacaattaataa 1739593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 222 - 341
Target Start/End: Complemental strand, 5879113 - 5878993
Alignment:
Q  222 atactcttatttattgaatttcatcaaact-taactactccactaactacaattaataatggagttttagtaaatgttactaattttaccattaaaatca 320  Q
    |||||||||||||||| ||||||   | || ||| || ||||||||| | |||||||||  | |||||||| |||| |||  ||||||||||||||||||    
T  5879113 atactcttatttattgcatttcaatcatctataattattccactaaccataattaataaatgtgttttagtgaatgatacatattttaccattaaaatca 5879014  T
Q  321 acacaattaatcatttcctta 341  Q
    |||  ||||||||||||||||    
T  5879013 acaatattaatcatttcctta 5878993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 215 - 279
Target Start/End: Complemental strand, 35505001 - 35504937
Alignment:
Q  215 cactattatactcttatttattgaatttcatcaaacttaactactccactaactacaattaataa 279  Q
    |||||||||||||||||||||||||||| ||| || ||||||| || | ||||||||||||||||    
T  35505001 cactattatactcttatttattgaattttatcgaatttaactattctattaactacaattaataa 35504937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 291 - 369
Target Start/End: Complemental strand, 6796099 - 6796021
Alignment:
Q  291 taaatgttactaattttaccattaaaatcaacacaattaatcatttccttaataattgtgcacaaatcttaaacgacta 369  Q
    |||||| || |||||||||||||||||||||| |  ||||||||||  |||||||| |||||||||  |||||||||||    
T  6796099 taaatgatattaattttaccattaaaatcaacgctgttaatcattttattaataatcgtgcacaaacattaaacgacta 6796021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 303 - 361
Target Start/End: Original strand, 9549999 - 9550057
Alignment:
Q  303 attttaccattaaaatcaacacaattaatcatttccttaataattgtgcacaaatctta 361  Q
    |||||| |||||||||||||||||||||||||||| ||||| || ||||| ||||||||    
T  9549999 attttatcattaaaatcaacacaattaatcatttcattaattatcgtgcataaatctta 9550057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 302 - 363
Target Start/End: Original strand, 39329370 - 39329430
Alignment:
Q  302 aattttaccattaaaatcaacacaattaatcatttccttaataattgtgcacaaatcttaaa 363  Q
    ||||||| |||| |||||||||||||||||||||| ||||| ||||||||||||| ||||||    
T  39329370 aattttatcattgaaatcaacacaattaatcattt-cttaaaaattgtgcacaaaacttaaa 39329430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 285 - 337
Target Start/End: Original strand, 12559649 - 12559701
Alignment:
Q  285 ttttagtaaatgttactaattttaccattaaaatcaacacaattaatcatttc 337  Q
    |||||||||||| || ||||||||  |||||||||||||||||||||||||||    
T  12559649 ttttagtaaatggtattaattttattattaaaatcaacacaattaatcatttc 12559701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 232 - 336
Target Start/End: Complemental strand, 34057731 - 34057627
Alignment:
Q  232 ttattgaatttcatcaaacttaactactccactaactacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaacacaattaat 331  Q
    ||||||||||||||| |||||||||| | |||||||||||| ||| || |   |||||||||||  ||||| |||||  ||| ||||||||| |||||||    
T  34057731 ttattgaatttcatccaacttaactatttcactaactacaaataacaacgatattttagtaaataatactagttttattattgaaatcaacataattaat 34057632  T
Q  332 cattt 336  Q
     ||||    
T  34057631 tattt 34057627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 256 - 336
Target Start/End: Complemental strand, 44648621 - 44648541
Alignment:
Q  256 tactccactaactacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaacacaattaatcattt 336  Q
    ||||||||||| |||||||| |||    ||||||||||||| |||||||||||||||| ||||||||  || |||||||||    
T  44648621 tactccactaattacaattagtaagtatgttttagtaaatgatactaattttaccattgaaatcaactaaactaatcattt 44648541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 300 - 355
Target Start/End: Original strand, 14819428 - 14819483
Alignment:
Q  300 ctaattttaccattaaaatcaacacaattaatcatttccttaataattgtgcacaa 355  Q
    ||||| ||||||||||||||||||||| |||||| ||| |||| ||||||||||||    
T  14819428 ctaatgttaccattaaaatcaacacaactaatcacttctttaaaaattgtgcacaa 14819483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 303 - 345
Target Start/End: Complemental strand, 28072179 - 28072137
Alignment:
Q  303 attttaccattaaaatcaacacaattaatcatttccttaataa 345  Q
    ||||| |||||||||||||||| ||||||||||||||||||||    
T  28072179 attttgccattaaaatcaacactattaatcatttccttaataa 28072137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #70
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 252 - 344
Target Start/End: Complemental strand, 135760 - 135668
Alignment:
Q  252 taactactccactaactacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaacacaattaatcatttccttaata 344  Q
    |||||||||||||||||| |||||||||| | ||||||| |||||  ||  |||||| |||||||||| | |  ||||||| |||| ||||||    
T  135760 taactactccactaactataattaataatagtgttttagcaaatgacacatattttatcattaaaatcgatattattaatcttttcattaata 135668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #71
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 302 - 342
Target Start/End: Complemental strand, 34455728 - 34455688
Alignment:
Q  302 aattttaccattaaaatcaacacaattaatcatttccttaa 342  Q
    ||||||| |||||||||||||||||||| ||||||||||||    
T  34455728 aattttatcattaaaatcaacacaattagtcatttccttaa 34455688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #72
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 283 - 355
Target Start/End: Original strand, 40109788 - 40109860
Alignment:
Q  283 agttttagtaaatgttactaattttaccattaaaatcaacacaattaatcatttccttaataattgtgcacaa 355  Q
    |||||||||||||  |||||||||||| ||| |||||||  |||||||||||||| |||| ||  ||||||||    
T  40109788 agttttagtaaattatactaattttactattgaaatcaattcaattaatcatttctttaaaaaccgtgcacaa 40109860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #73
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 13 - 84
Target Start/End: Original strand, 3184050 - 3184121
Alignment:
Q  13 aaggcaaactaaaggccgcaattaagacgactaggggcgggccacaataaaagtggaagttccaacagaaac 84  Q
    ||||||||| ||||||||||||| || ||||||||||||| || ||||||| | |||| || ||||| ||||    
T  3184050 aaggcaaaccaaaggccgcaatttaggcgactaggggcggaccgcaataaaggcggaatttacaacaaaaac 3184121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #74
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 228 - 279
Target Start/End: Original strand, 12559562 - 12559613
Alignment:
Q  228 ttatttattgaatttcatcaaacttaactactccactaactacaattaataa 279  Q
    ||||||||| || |||||||||||| |||| | |||||||||||||||||||    
T  12559562 ttatttatttaaattcatcaaacttgactagttcactaactacaattaataa 12559613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #75
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 313 - 352
Target Start/End: Complemental strand, 39465841 - 39465802
Alignment:
Q  313 taaaatcaacacaattaatcatttccttaataattgtgca 352  Q
    |||||||||||||||||||||||| |||||||| ||||||    
T  39465841 taaaatcaacacaattaatcattttcttaataagtgtgca 39465802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #76
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 257 - 374
Target Start/End: Complemental strand, 9839914 - 9839797
Alignment:
Q  257 actccactaactacaattaat-aatggagttttagtaaatgttactaattttaccattaaaatcaacacaattaatcatttccttaataattgtgcacaa 355  Q
    |||| |||||||| ||||||| |||| | ||||| |||||  ||||||||||| | || ||||||| ||| |||||||||||||||| ||||||  | ||    
T  9839914 actcaactaactataattaatgaatgta-ttttaataaataatactaattttatcgttgaaatcaaaacatttaatcatttccttaaaaattgtatataa 9839816  T
Q  356 atcttaaacgactaatatt 374  Q
    |  ||||||||||| ||||    
T  9839815 acattaaacgactattatt 9839797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #77
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 13 - 63
Target Start/End: Complemental strand, 22277481 - 22277431
Alignment:
Q  13 aaggcaaactaaaggccgcaattaagacgactaggggcgggccacaataaa 63  Q
    |||||||||||||||| |||||| || ||||||||||||| || |||||||    
T  22277481 aaggcaaactaaaggctgcaatttaggcgactaggggcggaccgcaataaa 22277431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #78
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 163 - 205
Target Start/End: Complemental strand, 40996543 - 40996501
Alignment:
Q  163 ctcaaaataattgtcactttacaataccaatgcaatatttatt 205  Q
    ||||||||||||||||||||| ||||||||||||| ||| |||    
T  40996543 ctcaaaataattgtcactttagaataccaatgcaacattcatt 40996501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #79
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 303 - 345
Target Start/End: Complemental strand, 44225732 - 44225690
Alignment:
Q  303 attttaccattaaaatcaacacaattaatcatttccttaataa 345  Q
    |||||||||||||||||||||  |||||||||||| |||||||    
T  44225732 attttaccattaaaatcaacattattaatcatttcgttaataa 44225690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #80
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 251 - 280
Target Start/End: Complemental strand, 6796423 - 6796394
Alignment:
Q  251 ttaactactccactaactacaattaataat 280  Q
    ||||||||||||||||||||||||||||||    
T  6796423 ttaactactccactaactacaattaataat 6796394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #81
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 163 - 196
Target Start/End: Original strand, 32476222 - 32476255
Alignment:
Q  163 ctcaaaataattgtcactttacaataccaatgca 196  Q
    ||||||||||||||||||||| ||||||||||||    
T  32476222 ctcaaaataattgtcactttagaataccaatgca 32476255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #82
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 166 - 206
Target Start/End: Original strand, 15675373 - 15675413
Alignment:
Q  166 aaaataattgtcactttacaataccaatgcaatatttatta 206  Q
    ||||||| |||||||||| ||||||||| ||||||||||||    
T  15675373 aaaataactgtcactttagaataccaatacaatatttatta 15675413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #83
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 163 - 244
Target Start/End: Original strand, 40109647 - 40109727
Alignment:
Q  163 ctcaaaataattgtcactttacaataccaatgcaatatttattannnnnnnccactattatactcttatttattgaatttca 244  Q
    |||||||||||||||| |||| ||||  ||||||| ||||||||       |||||| |||| |||||||||||||||||||    
T  40109647 ctcaaaataattgtcattttagaatat-aatgcaacatttattatatttttccactaatatattcttatttattgaatttca 40109727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 119; Significance: 1e-60; HSPs: 104)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 166 - 376
Target Start/End: Complemental strand, 40123039 - 40122828
Alignment:
Q  166 aaaataattgtcactttacaataccaatgcaatatttattannnnnnncc-actattatactcttatttattgaatttcatcaaacttaactactccact 264  Q
    ||||||||| |||||||||||||||||||||| ||||||||       || || ||| ||| ||||||||||||||||| || ||||||||| |||||||    
T  40123039 aaaataattatcactttacaataccaatgcaacatttattatttttttcccaccattgtacccttatttattgaatttcgtcgaacttaactgctccact 40122940  T
Q  265 aactacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaacacaattaatcatttccttaataattgtgcacaaatcttaaac 364  Q
    ||||||||| ||||| || ||||||||||||| ||||||||||| ||||||||||||| ||||||||||||||||||||||| ||||||||| |||||||    
T  40122939 aactacaatcaataagggtgttttagtaaatgctactaattttaacattaaaatcaacgcaattaatcatttccttaataatcgtgcacaaagcttaaac 40122840  T
Q  365 gactaatattgt 376  Q
    ||||||||||||    
T  40122839 gactaatattgt 40122828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 166 - 376
Target Start/End: Complemental strand, 47464550 - 47464339
Alignment:
Q  166 aaaataattgtcactttacaataccaatgcaatatttattannnnnnn-ccactattatactcttatttattgaatttcatcaaacttaactactccact 264  Q
    ||||||||| ||  ||||||||||||||||| |||||||||        |||||||||||| |||||||||||||||||||| ||||||||||||||||     
T  47464550 aaaataattatcgttttacaataccaatgcattatttattattttttttccactattatacccttatttattgaatttcatccaacttaactactccacc 47464451  T
Q  265 aactacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaacacaattaatcatttccttaataattgtgcacaaatcttaaac 364  Q
    |||||||||||||||  |  |||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||| |||| |||| |||||||    
T  47464450 aactacaattaataagagttttttagtaaatgctactaattttaccattgaaatcaacacaattaatcatttccttaataatcgtgctcaaaccttaaac 47464351  T
Q  365 gactaatattgt 376  Q
    ||||||||||||    
T  47464350 gactaatattgt 47464339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 163 - 374
Target Start/End: Complemental strand, 47773206 - 47772995
Alignment:
Q  163 ctcaaaataattgtcactttacaataccaatgcaatatttattannnnnnnccactattatactcttatttattgaatttcatcaaacttaactactcca 262  Q
    ||||||||||||||||||||| ||||||||||||  ||||||||       ||| ||| |||| ||||||||||||| |||||| |||||||||||||||    
T  47773206 ctcaaaataattgtcactttagaataccaatgcagcatttattatttttttccattataatacccttatttattgaacttcatccaacttaactactcca 47773107  T
Q  263 ctaactacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaacacaattaatcatttccttaataattgtgcacaaatcttaa 362  Q
    ||||||||||||||||| || ||||||||||||| ||||||||||||||| |||||||||||||||||| ||||||||||||| ||||||  || |||||    
T  47773106 ctaactacaattaataagggtgttttagtaaatgatactaattttaccatcaaaatcaacacaattaattatttccttaataactgtgcatcaaccttaa 47773007  T
Q  363 acgactaatatt 374  Q
    ||||||| ||||    
T  47773006 acgactattatt 47772995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 116; E-Value: 7e-59
Query Start/End: Original strand, 163 - 346
Target Start/End: Complemental strand, 35380521 - 35380337
Alignment:
Q  163 ctcaaaataattgtcactttacaataccaatgcaatatttattannnnnnn-ccactattatactcttatttattgaatttcatcaaacttaactactcc 261  Q
    ||||||||||||||||||||| ||||||||||||| ||||||||        ||| ||||||||||||||||||||||||||||| |||||||| |||||    
T  35380521 ctcaaaataattgtcactttataataccaatgcaacatttattattttttttccattattatactcttatttattgaatttcatccaacttaaccactcc 35380422  T
Q  262 actaactacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaacacaattaatcatttccttaataat 346  Q
    ||||||||||||||||||||  ||||||||||||| |||||||||||||||||||||||||| |||||||||||| |||||||||    
T  35380421 actaactacaattaataatgatgttttagtaaatgctactaattttaccattaaaatcaacataattaatcattttcttaataat 35380337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 115 - 385
Target Start/End: Complemental strand, 6643894 - 6643625
Alignment:
Q  115 tactccattcgtctcacaattattgtttctttagcannnnnnnnnnnnctcaaaataattgtcactttacaataccaatgcaatatttattannnnnnnc 214  Q
    |||||||| ||||||||||||||||| |||||||||            |||||||||||||||||||||||||  ||| |||  |||||||        |    
T  6643894 tactccatccgtctcacaattattgtctctttagcatattttcttttcctcaaaataattgtcactttacaatttcaacgcagcatttatt-tatttttc 6643796  T
Q  215 cactattatactcttatttattgaatttcatcaaacttaactactccactaactacaattaataatggagttttagtaaatgttactaattttaccatta 314  Q
    ||||||||||| |||||||||||||||||||| ||||||||||  |||||||||||||||||||| |  ||||||||||||| ||||||||||||||||     
T  6643795 cactattatacccttatttattgaatttcatccaacttaactataccactaactacaattaataaagatgttttagtaaatgctactaattttaccattg 6643696  T
Q  315 aaatcaacacaattaatcatttccttaataattgtgcacaaatcttaaacgactaatattgtttgacggag 385  Q
    |||||||||||||||||||||||||||||||| |||| ||||  |||||| |||||||||||  |||||||    
T  6643695 aaatcaacacaattaatcatttccttaataatcgtgctcaaacattaaactactaatattgtgagacggag 6643625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 166 - 391
Target Start/End: Original strand, 34360592 - 34360817
Alignment:
Q  166 aaaataattgtcactttacaataccaatgcaatatttattannnnnnnccactattatactcttatttattgaatttcatcaaacttaactactccacta 265  Q
    ||||||||||||||||||||||||||||  || |||| ||        |||||||||||| |||||||||||||||| ||  ||||||||||||||||||    
T  34360592 aaaataattgtcactttacaataccaatttaacattttttttttttttccactattatacccttatttattgaattttattcaacttaactactccacta 34360691  T
Q  266 actacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaacacaattaatcatttccttaataattgtgcacaaatcttaaacg 365  Q
    ||||||||||||||  | ||||||||||||| |||||||||||||||| ||||||| ||||||||||||||| |||||||| |||||||||  |||||||    
T  34360692 actacaattaataagagtgttttagtaaatgctactaattttaccattgaaatcaatacaattaatcatttctttaataatcgtgcacaaactttaaacg 34360791  T
Q  366 actaatattgtttgacggaggtagta 391  Q
    | |||||||||  |||||||| ||||    
T  34360792 attaatattgtgagacggagggagta 34360817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 215 - 391
Target Start/End: Original strand, 43237229 - 43237405
Alignment:
Q  215 cactattatactcttatttattgaatttcatcaaacttaactactccactaactacaattaataatggagttttagtaaatgttactaattttaccatta 314  Q
    ||||||||||| |||||||||||||||||||| |||||||||||| ||||||||| |||||||||||   ||||||||||| |||||||||||||||||     
T  43237229 cactattatacacttatttattgaatttcatccaacttaactacttcactaactataattaataatgattttttagtaaatattactaattttaccattg 43237328  T
Q  315 aaatcaacacaattaatcatttccttaataattgtgcacaaatcttaaacgactaatattgtttgacggaggtagta 391  Q
    |||| ||||||||||||||||||||||||||| ||||| ||| |||||||||||||||||||  |||||||| ||||    
T  43237329 aaataaacacaattaatcatttccttaataatcgtgcataaaccttaaacgactaatattgtgagacggaggcagta 43237405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 163 - 369
Target Start/End: Complemental strand, 5841615 - 5841408
Alignment:
Q  163 ctcaaaataattgtcactttacaataccaatgcaatatttattannnnnnnccactattatactcttatttattgaatttcatcaaacttaa-ctactcc 261  Q
    ||||||||||||||||||||| |||| |||||||  ||||||||       ||| ||||||||  ||||||||||||||||||| ||||||| |||||||    
T  5841615 ctcaaaataattgtcactttagaatatcaatgcatcatttattattaatttccattattatacctttatttattgaatttcatccaacttaaactactcc 5841516  T
Q  262 actaactacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaacacaattaatcatttccttaataattgtgcacaaatctta 361  Q
    |||||||||||||||||| ||  |||||||||||| || |||||||||||||||||||||| |||| |||||||||||||||| ||||||||||| ||||    
T  5841515 actaactacaattaataagggtattttagtaaatgatattaattttaccattaaaatcaacgcaatcaatcatttccttaatagttgtgcacaaacctta 5841416  T
Q  362 aacgacta 369  Q
    ||||||||    
T  5841415 aacgacta 5841408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 163 - 374
Target Start/End: Complemental strand, 11907786 - 11907575
Alignment:
Q  163 ctcaaaataattgtcactttacaataccaatgcaatatttattannnnnnnccactattatactcttatttattgaatttcatcaaacttaactactcca 262  Q
    ||||||||||||||||||||| ||||||||||||  ||||||||       ||| ||| ||||  |||||||||||| |||||| |||||||||||||||    
T  11907786 ctcaaaataattgtcactttagaataccaatgcagcatttattatttttttccattataatacatttatttattgaacttcatccaacttaactactcca 11907687  T
Q  263 ctaactacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaacacaattaatcatttccttaataattgtgcacaaatcttaa 362  Q
     |||||||||||||||| || ||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||| |||||  || |||||    
T  11907686 ataactacaattaataagggtgttttagtaaatgatactaattttaccatcaaaatcaacacaattaatcatttccttaataatcgtgcattaaccttaa 11907587  T
Q  363 acgactaatatt 374  Q
    | ||||| ||||    
T  11907586 atgactattatt 11907575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 214 - 396
Target Start/End: Original strand, 32884786 - 32884968
Alignment:
Q  214 ccactattatactcttatttattgaatttcatcaaacttaactactccactaactacaattaataatggagttttagtaaatgttactaattttaccatt 313  Q
    |||||||||||  ||||||||||||||| |||| ||||||||||||||||||||||||||||||||  | |||||| |||||| |||||||| |||||||    
T  32884786 ccactattatatccttatttattgaattccatccaacttaactactccactaactacaattaataagagtgttttactaaatgctactaattctaccatt 32884885  T
Q  314 aaaatcaacacaattaatcatttccttaataattgtgcacaaatcttaaacgactaatattgtttgacggaggtagtagaaga 396  Q
     |||||||||||||||||||||| ||||||||| ||||||||| |||||||||||||||||||  |||||||| |||| ||||    
T  32884886 gaaatcaacacaattaatcattttcttaataatcgtgcacaaaccttaaacgactaatattgtgagacggaggaagtataaga 32884968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 163 - 369
Target Start/End: Complemental strand, 38405290 - 38405083
Alignment:
Q  163 ctcaaaataattgtcactttacaataccaatgcaatatttattannnnnnn-ccactattatactcttatttattgaatttcatcaaacttaactactcc 261  Q
    ||||||||||||||||||||| |||| |||||||| ||||||||        ||| ||||||||  ||||||||||||||||||| ||||||||||| ||    
T  38405290 ctcaaaataattgtcactttagaatagcaatgcaacatttattactttttttccattattatacctttatttattgaatttcatccaacttaactacacc 38405191  T
Q  262 actaactacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaacacaattaatcatttccttaataattgtgcacaaatctta 361  Q
    |||||||||||||||||| ||  |||||||||||| || ||||||||||||| ||||||||| |||||||||||||||||||||| ||||||||| ||||    
T  38405190 actaactacaattaataagggtattttagtaaatgatattaattttaccatttaaatcaacagaattaatcatttccttaataatcgtgcacaaacctta 38405091  T
Q  362 aacgacta 369  Q
    ||||||||    
T  38405090 aacgacta 38405083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 214 - 391
Target Start/End: Complemental strand, 17237432 - 17237255
Alignment:
Q  214 ccactattatactcttatttattgaatttcatcaaacttaactactccactaactacaattaataatggagttttagtaaatgttactaattttaccatt 313  Q
    |||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||| |  ||||||||||||||||||||||||||||||    
T  17237432 ccactattatacccttatttattgaatttcatccaacttaactactccactaactacaattaataaggttgttttagtaaatgttactaattttaccatt 17237333  T
Q  314 aaaatcaacacaattaatcatttccttaataattgtgcacaaatcttaaacgactaatattgtttgacggaggtagta 391  Q
      |||||||||||||||| |||| |||||||||  |||||||| |||||| ||||| ||||||  |||||||| ||||    
T  17237332 gcaatcaacacaattaattattttcttaataatcatgcacaaaccttaaatgactagtattgtgagacggagggagta 17237255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 163 - 376
Target Start/End: Complemental strand, 7061851 - 7061638
Alignment:
Q  163 ctcaaaataattgtcactttacaataccaatgcaatatttattannnnnnnccactattatactcttatttattgaatttcatcaaacttaactactcca 262  Q
    |||||||||||||| |||||| |||| |||| ||| ||||||||        ||||||||||| |||||||||||||||||||  ||||||| || ||||    
T  7061851 ctcaaaataattgttactttaaaatatcaatacaacatttattatttattttcactattatacccttatttattgaatttcattcaacttaattaatcca 7061752  T
Q  263 ctaactacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaacacaattaatcatttccttaataattgtgcacaaatcttaa 362  Q
    ||||||||||||||||| |   || ||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||| ||| ||||| |||||    
T  7061751 ctaactacaattaataaagatattatagtaaatgatactaattttaccattgaaatcaacacaattaatcatttccttaataatcgtgtacaaaccttaa 7061652  T
Q  363 acgactaatattgt 376  Q
    ||||||||||||||    
T  7061651 acgactaatattgt 7061638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 163 - 391
Target Start/End: Complemental strand, 35311412 - 35311182
Alignment:
Q  163 ctcaaaataattgtcactttacaataccaatgcaatatttattannnnnnn--ccactattatactcttatttattgaatttcatcaaacttaactactc 260  Q
    ||||||||||||||||||||||||||||||||||| ||||||||         ||| ||||||||  ||||||||||||||||||| ||||||| |||||    
T  35311412 ctcaaaataattgtcactttacaataccaatgcaacatttattattattttttccaatattatacctttatttattgaatttcatccaacttaattactc 35311313  T
Q  261 cactaactacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaacacaattaatcatttccttaataattgtgcacaaatctt 360  Q
    |||||||||||||||||||  | ||| |||||||||  | ||||||||||||| |||| |||| |||||||||||||||||||||| ||||||||| |||    
T  35311312 cactaactacaattaataagagtgttctagtaaatgcaattaattttaccattgaaattaacataattaatcatttccttaataatcgtgcacaaacctt 35311213  T
Q  361 aaacgactaatattgtttgacggaggtagta 391  Q
    |||||  |||||||||  |||||||| ||||    
T  35311212 aaacgcttaatattgtaagacggagggagta 35311182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 163 - 393
Target Start/End: Original strand, 22129976 - 22130211
Alignment:
Q  163 ctcaaaataattgtcactttacaataccaatgcaatatttattannnnnnn-ccactattatactcttatttattgaatttcatcaaacttaactactcc 261  Q
    |||||||||||||||| |||||||||||||||||| ||||||||        ||| ||||||||  ||||||||||||||||||| ||||||| ||||||    
T  22129976 ctcaaaataattgtcattttacaataccaatgcaacatttattattttttttccattattatacctttatttattgaatttcatccaacttaattactcc 22130075  T
Q  262 actaactacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaac----acaattaatcatttccttaataattgtgcacaaat 357  Q
    |||||||||||||||||| |  ||||| ||||||| |||||||| ||||||| ||||||||    |||||||||||||||||||||||  |||||||||     
T  22130076 actaactacaattaataaggatgtttttgtaaatgatactaattataccattgaaatcaacacatacaattaatcatttccttaataaccgtgcacaaac 22130175  T
Q  358 cttaaacgactaatattgtttgacggaggtagtaga 393  Q
    |||||||||||||||||||  |||||| | ||||||    
T  22130176 cttaaacgactaatattgtgagacggatggagtaga 22130211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 163 - 369
Target Start/End: Complemental strand, 49428528 - 49428323
Alignment:
Q  163 ctcaaaataattgtcactttacaataccaatgcaatatttattannnnnnnccactattatactcttatttattgaatttcatcaaacttaactactcca 262  Q
    ||||||||||||||||||||| || | |||||||| ||||||||       ||| |||||||| |||||||||||||||||||| ||||||| |||||||    
T  49428528 ctcaaaataattgtcactttagaa-atcaatgcaacatttattacttttttccattattatacccttatttattgaatttcatccaacttaattactcca 49428430  T
Q  263 ctaactacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaacacaattaatcatttccttaataattgtgcacaaatcttaa 362  Q
    ||||||||||||||||| ||  |||||||||||  || ||||||||||||| |||||||||||| ||||||||||||||||||| ||||| ||| |||||    
T  49428429 ctaactacaattaataagggtattttagtaaattatattaattttaccattgaaatcaacacaaataatcatttccttaataatcgtgcaaaaaccttaa 49428330  T
Q  363 acgacta 369  Q
    |||||||    
T  49428329 acgacta 49428323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 218 - 374
Target Start/End: Complemental strand, 33790863 - 33790707
Alignment:
Q  218 tattatactcttatttattgaatttcatcaaacttaactactccactaactacaattaataatggagttttagtaaatgttactaattttaccattaaaa 317  Q
    |||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||| || ||||||| |||||  |||||||||||||| ||||    
T  33790863 tattatacccttatttattgaatttcatccaacttaactactccactaactacaattaataagggtgttttagcaaatgaaactaattttaccatcaaaa 33790764  T
Q  318 tcaacacaattaatcatttccttaataattgtgcacaaatcttaaacgactaatatt 374  Q
    ||||||||||||||||||| ||||||||| ||||| ||| |||||||||||| ||||    
T  33790763 tcaacacaattaatcattttcttaataatcgtgcataaaccttaaacgactattatt 33790707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 216 - 376
Target Start/End: Original strand, 53346746 - 53346906
Alignment:
Q  216 actattatactcttatttattgaatttcatcaaacttaactactccactaactacaattaataatggagttttagtaaatgttactaattttaccattaa 315  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||| || ||||||||||||| || ||||||||||||| |    
T  53346746 actattatactcatatttattgaatttcatcaaacttaactactccactaactaaaattaataagggtgttttagtaaatgctattaattttaccattga 53346845  T
Q  316 aatcaacacaattaatcatttccttaataattgtgcacaaatcttaaacgactaatattgt 376  Q
    ||  |||||||| ||| |||| ||||||||| |||||||||| ||||||||||||||||||    
T  53346846 aactaacacaatcaattattttcttaataatcgtgcacaaattttaaacgactaatattgt 53346906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 163 - 374
Target Start/End: Complemental strand, 52859981 - 52859775
Alignment:
Q  163 ctcaaaataattgtcactttacaataccaatgcaatatttattannnnnnnccactattatactcttatttattgaatttcatcaaacttaactactcca 262  Q
    ||||||||||||||||||||| ||||||||||||| ||||||||       ||| |||||||| ||     ||||||||||||  |||||||||||||||    
T  52859981 ctcaaaataattgtcactttagaataccaatgcaacatttattattttttcccattattataccct-----attgaatttcattcaacttaactactcca 52859887  T
Q  263 ctaactacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaacacaattaatcatttccttaataattgtgcacaaatcttaa 362  Q
    ||||||||||||||||| |  ||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||| ||||| ||  |||||    
T  52859886 ctaactacaattaataaggatgttttagtaaatgatactaattttaccatcaaaatcaacacaattaatcatttccttaataatcgtgcataagccttaa 52859787  T
Q  363 acgactaatatt 374  Q
     |||||| ||||    
T  52859786 gcgactattatt 52859775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 166 - 376
Target Start/End: Complemental strand, 44536381 - 44536170
Alignment:
Q  166 aaaataattgtcactttacaataccaatgcaatatttatt--annnnnnnccactattatactcttatttattgaatttcatcaaacttaactactccac 263  Q
    |||||||||||||||||||||||| ||||||  |||||||  |       |||||||||||| ||||||| |||||||||||| |||||| |||||||||    
T  44536381 aaaataattgtcactttacaatactaatgcagcatttattttattcttttccactattatacccttattt-ttgaatttcatctaacttagctactccac 44536283  T
Q  264 taactacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaacacaattaatcatttccttaataattgtgcacaaatcttaaa 363  Q
    |||||||||||||||| || |||||| |||||  | ||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||  |||||    
T  44536282 taactacaattaataagggtgttttaataaatcctgctaattttaccattaaaatcaacacaattaatcatttccttaataatcgtgcataaactttaaa 44536183  T
Q  364 cgactaatattgt 376  Q
    | | |||||||||    
T  44536182 caattaatattgt 44536170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 163 - 374
Target Start/End: Original strand, 2066725 - 2066934
Alignment:
Q  163 ctcaaaataattgtcactttacaataccaatgcaatatttattannnnnnnccactattatactcttatttattgaatttcatcaaacttaactactcca 262  Q
    ||||||||||||||||||||| |||||||||| |  ||||||||        || ||||||||  ||||||||||||||||||| ||||||||||| |||    
T  2066725 ctcaaaataattgtcactttagaataccaatgaagcatttattatttttt--cattattatacctttatttattgaatttcatctaacttaactacccca 2066822  T
Q  263 ctaactacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaacacaattaatcatttccttaataattgtgcacaaatcttaa 362  Q
    ||||||| ||||||||| || |||||| |||||  |||||| |||||||| ||||||||||||||||||||||||||||||||| ||||| ||| |||||    
T  2066823 ctaactaaaattaataagggtgttttaataaataatactaactttaccatcaaaatcaacacaattaatcatttccttaataatcgtgcataaaccttaa 2066922  T
Q  363 acgactaatatt 374  Q
    ||||||| ||||    
T  2066923 acgactattatt 2066934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 166 - 391
Target Start/End: Complemental strand, 16821516 - 16821290
Alignment:
Q  166 aaaataattgtcactttacaataccaatgcaatatttattannnnnnnc-cactattatactcttatttattgaatttcatcaaacttaactactccact 264  Q
    |||||||||||||||||| ||||||||||||  ||||||||         ||||||||||| |||||||||||||||||||  ||||||| |||||||||    
T  16821516 aaaataattgtcactttagaataccaatgcagcatttattattatttttgcactattatacccttatttattgaatttcattcaacttaaatactccact 16821417  T
Q  265 aactacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaacacaattaatcatttccttaataattgtgcacaaatcttaaac 364  Q
    ||||| ||||||||| |   || ||||||||| ||||||||||| |||| ||||||||||||||||||||| | |||||||| ||||||||| |||||||    
T  16821416 aactataattaataaggatattatagtaaatgatactaattttatcattgaaatcaacacaattaatcattgcattaataatcgtgcacaaaccttaaac 16821317  T
Q  365 gactaatattgtttgacggaggtagta 391  Q
    ||||||| ||||  |||||||| ||||    
T  16821316 gactaattttgtgagacggagggagta 16821290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 163 - 369
Target Start/End: Complemental strand, 42617090 - 42616884
Alignment:
Q  163 ctcaaaataattgtcactttacaataccaatgcaatatttattannnnnnnccactattatactcttatttattgaatttcatcaaacttaactactcca 262  Q
    ||||||||||||||||||||| ||||| ||||||| ||||||||       ||| |||||||| |||||||||||||||||||   ||||||||||||||    
T  42617090 ctcaaaataattgtcactttagaatacaaatgcaacatttattattattttccattattatacacttatttattgaatttcattcgacttaactactcca 42616991  T
Q  263 ctaactacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaacacaattaatcatttccttaataattgtgcacaaatcttaa 362  Q
    || ||||||||||||||     |||||||||||| || ||||||||||||| ||||||||||| ||||||||||| ||||||||  |||||||| |||||    
T  42616990 cttactacaattaataaaaatattttagtaaatgatattaattttaccattgaaatcaacacagttaatcatttctttaataatcatgcacaaaacttaa 42616891  T
Q  363 acgacta 369  Q
    |||||||    
T  42616890 acgacta 42616884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 163 - 374
Target Start/End: Complemental strand, 49176122 - 49175910
Alignment:
Q  163 ctcaaaataattgtcactttacaataccaatgcaatatttattannnnnnncc-actattatactcttatttattgaatttcatcaaacttaactactcc 261  Q
    ||||||||||||||||||||| ||||||||||||| | ||||||       || |||||||||| |||||||||||||||| ||| ||||||||||||||    
T  49176122 ctcaaaataattgtcactttagaataccaatgcaacaattattatttttttcccactattatacccttatttattgaattttatccaacttaactactcc 49176023  T
Q  262 actaactacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaacacaattaatcatttccttaataattgtgcacaaatctta 361  Q
     ||||||||||||||||| |   |||||||||||| ||||||||||| |||| |||||  ||||||||||||||| ||||| |||  |||||||| ||||    
T  49176022 gctaactacaattaataaggttattttagtaaatgatactaattttatcattgaaatctccacaattaatcattttcttaaaaatcatgcacaaacctta 49175923  T
Q  362 aacgactaatatt 374  Q
    |||||||| ||||    
T  49175922 aacgactattatt 49175910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 228 - 374
Target Start/End: Original strand, 17114439 - 17114585
Alignment:
Q  228 ttatttattgaatttcatcaaacttaactactccactaactacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaacacaat 327  Q
    |||||||||||| ||| || || ||||||||||||||||||||||||||||| || ||||||||||||| ||||||||||||||| ||||||||||||||    
T  17114439 ttatttattgaacttcctccaaattaactactccactaactacaattaataagggtgttttagtaaatgatactaattttaccatcaaaatcaacacaat 17114538  T
Q  328 taatcatttccttaataattgtgcacaaatcttaaacgactaatatt 374  Q
    |||||||||||||||||| ||||||  || |||||||||||| ||||    
T  17114539 taatcatttccttaataactgtgcatcaaccttaaacgactattatt 17114585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 218 - 366
Target Start/End: Original strand, 6609750 - 6609898
Alignment:
Q  218 tattatactcttatttattgaatttcatcaaacttaactactccactaactacaattaataatggagttttagtaaatgttactaattttaccattaaaa 317  Q
    ||||||||||||||||||||| ||||||| ||||||||||||||| ||| |||||||||||| |  ||||| ||||||| ||||||||||||||| ||||    
T  6609750 tattatactcttatttattgagtttcatccaacttaactactccaataattacaattaataaagatgtttttgtaaatgatactaattttaccatcaaaa 6609849  T
Q  318 tcaacacaattaatcatttccttaataattgtgcacaaatcttaaacga 366  Q
    ||||||||||||||||||||||||||||| ||||| |||  ||||||||    
T  6609850 tcaacacaattaatcatttccttaataatcgtgcataaactttaaacga 6609898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 164 - 376
Target Start/End: Original strand, 49746895 - 49747107
Alignment:
Q  164 tcaaaataattgtcactttacaataccaatgcaatatttattannnnnnn-ccactattatactcttatttattgaatttcatcaaacttaactactcca 262  Q
    |||||||||||||||||||||||||||||||||| ||||||||        ||| |||||||| |||||||||||||||||||| ||||||||||||| |    
T  49746895 tcaaaataattgtcactttacaataccaatgcaacatttattattatttttccattattatacccttatttattgaatttcatccaacttaactactcaa 49746994  T
Q  263 ctaactacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaacacaattaatcatttccttaataattgtgcacaaatcttaa 362  Q
    ||||||| ||||||| | ||  |||||||||||  ||||||||||| |||| ||||||||||||||||| ||||  |||||||| ||||||||  ||| |    
T  49746995 ctaactataattaatgaaggtattttagtaaatactactaattttatcattgaaatcaacacaattaattattt-tttaataatcgtgcacaagccttga 49747093  T
Q  363 acgactaatattgt 376  Q
    | ||||||||||||    
T  49747094 atgactaatattgt 49747107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 163 - 346
Target Start/End: Complemental strand, 21240887 - 21240708
Alignment:
Q  163 ctcaaaataattgtcactttacaataccaatgcaatatttattannnnnnnccactattatactcttatttattgaatttcatcaaacttaactactcca 262  Q
    |||||||||| |||||||||| |||| |||||||| ||||||         ||| |||||||| |||||||||||||||||||| ||||||||||||| |    
T  21240887 ctcaaaataaatgtcactttagaatatcaatgcaacatttat----attttccattattatacccttatttattgaatttcatccaacttaactactcaa 21240792  T
Q  263 ctaactacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaacacaattaatcatttccttaataat 346  Q
    ||||||||||||||||| |  || |||||||||| ||||||||||||||| |||||||||||| ||||||||||||||||||||    
T  21240791 ctaactacaattaataaggatgtgttagtaaatgatactaattttaccatcaaaatcaacacagttaatcatttccttaataat 21240708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 218 - 369
Target Start/End: Original strand, 54506777 - 54506928
Alignment:
Q  218 tattatactcttatttattgaatttcatcaaacttaactactccactaactacaattaataatggagttttagtaaatgttactaattttaccattaaaa 317  Q
    ||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||   ||||| |||||| || ||||||||||||| |||    
T  54506777 tattatattcttattaattgaatttcatcaaacttaactactccactaactacaattgataatgatattttaataaatgatattaattttaccattgaaa 54506876  T
Q  318 tcaacacaattaatcatttccttaataattgtgcacaaatcttaaacgacta 369  Q
    |||||||| |||||||||| ||||||||  ||  ||||||||||||||||||    
T  54506877 tcaacacagttaatcattttcttaataaccgtaaacaaatcttaaacgacta 54506928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 166 - 369
Target Start/End: Complemental strand, 52247611 - 52247409
Alignment:
Q  166 aaaataattgtcactttacaataccaatgcaatatttattannnnnnnccactattatactcttatttattgaatttcatcaaacttaactactccacta 265  Q
    ||||||||||||||||||||| ||||||  || ||||||||       |||  ||||||| |||||||| ||||||||||  ||||||||||||||||||    
T  52247611 aaaataattgtcactttacaa-accaatagaacatttattattcttttccatcattatacacttatttaatgaatttcattcaacttaactactccacta 52247513  T
Q  266 actacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaacacaattaatcatttccttaataattgtgcacaaatcttaaacg 365  Q
    |||||||||||||| |   |||||||||||  || ||||||||||||| |||| ||||||||||||||||| ||||||||| ||||||||  ||||||||    
T  52247512 actacaattaataaggatattttagtaaattgtattaattttaccattgaaattaacacaattaatcattttcttaataatcgtgcacaatccttaaacg 52247413  T
Q  366 acta 369  Q
    ||||    
T  52247412 acta 52247409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 166 - 391
Target Start/End: Complemental strand, 2942831 - 2942604
Alignment:
Q  166 aaaataattgtcactttacaataccaatgcaatatttattannnnnnn---ccactattatactcttatttattgaatttcatcaaacttaactactcca 262  Q
    ||||||||||||| ||||||||| ||||| |||||||||||          |||||||||||   || ||||||||| |||||  |||||||| ||||||    
T  2942831 aaaataattgtcattttacaatatcaatgaaatatttattattatttttttccactattatatctttgtttattgaaattcattcaacttaaccactcca 2942732  T
Q  263 ctaactacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaacacaattaatcatttccttaataattgtgcacaaatcttaa 362  Q
    ||||||||||||||||| || ||||||||||||| ||||||||||| |||  ||||||||||||||||||||||| ||||||||  |  ||||| |||||    
T  2942731 ctaactacaattaataa-ggtgttttagtaaatgctactaattttatcatcgaaatcaacacaattaatcatttctttaataatcttatacaaaccttaa 2942633  T
Q  363 acgactaatattgtttgacggaggtagta 391  Q
    ||||||||||||||  |||||| ||||||    
T  2942632 acgactaatattgtgagacggatgtagta 2942604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 214 - 391
Target Start/End: Original strand, 36985771 - 36985948
Alignment:
Q  214 ccactattatactcttatttattgaatttcatcaaacttaactactccactaactacaattaataatggagttttagtaaatgttactaattttaccatt 313  Q
    |||| ||||||| |||||||||||||||||||| ||||||| || || |||||||||||||||||  ||  |||||||||||| ||||||||||||||||    
T  36985771 ccaccattatacccttatttattgaatttcatccaacttaattattctactaactacaattaatacgggtattttagtaaatgatactaattttaccatt 36985870  T
Q  314 aaaatcaacacaattaatcatttccttaataattgtgcacaaatcttaaacgactaatattgtttgacggaggtagta 391  Q
     ||||||||||||||||||||||||| || ||| ||  | ||||||||||||| || |||| |  |||||||| ||||    
T  36985871 gaaatcaacacaattaatcatttcctgaaaaatcgtataaaaatcttaaacgagtattattttgagacggagggagta 36985948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 166 - 374
Target Start/End: Original strand, 2653357 - 2653563
Alignment:
Q  166 aaaataattgtcactttacaataccaatgcaatatttattannnnnnnccactattatactcttatttattgaatttcatcaaacttaactactccacta 265  Q
    |||||| ||||||||||| |||| |||||||| ||||||||       ||| ||||||||  ||||||||| ||||||||| || |||||||||||  ||    
T  2653357 aaaatagttgtcactttagaatatcaatgcaacatttattatctttttccattattatacctttatttattaaatttcatccaatttaactactccttta 2653456  T
Q  266 actacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaacacaattaatcatttccttaataattgtgcacaaatcttaaacg 365  Q
    ||||||||||||||  |  ||||| |||||| |||||||||||| ||| ||||||||||||||||||||||  ||||||||  ||||||||||||||||     
T  2653457 actacaattaataagagtattttaataaatgatactaattttacaattgaaatcaacacaattaatcattt--ttaataatcatgcacaaatcttaaaca 2653554  T
Q  366 actaatatt 374  Q
    |||| ||||    
T  2653555 actattatt 2653563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 163 - 393
Target Start/End: Original strand, 4972507 - 4972724
Alignment:
Q  163 ctcaaaataattgtcactttacaataccaatgcaatatttattannnnnnnccactattatactcttatttattgaatttcatcaaacttaactactcca 262  Q
    |||||||||| ||||||||||||||||||||| || ||||||||       | |||||||||| |||||||||||||||||||| ||| ||||           
T  4972507 ctcaaaataactgtcactttacaataccaatgtaacatttattatttttttc-actattatacacttatttattgaatttcatctaacataac------- 4972598  T
Q  263 ctaactacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaacacaattaatcatttccttaataattgtgcacaaatcttaa 362  Q
         ||||||||||||  | |||||||||||||| || |||||| | ||| ||||||||||||||||||||||| |||||||| |||||||||||||||    
T  4972599 -----tacaattaataagagtgttttagtaaatgtcaccaatttttcaattgaaatcaacacaattaatcatttcattaataatcgtgcacaaatcttaa 4972693  T
Q  363 acgactaatattgtttgacggaggtagtaga 393  Q
    ||||||||||||||  |||||| | ||||||    
T  4972694 acgactaatattgtgagacggatggagtaga 4972724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 218 - 374
Target Start/End: Original strand, 3689551 - 3689707
Alignment:
Q  218 tattatactcttatttattgaatttcatcaaacttaactactccactaactacaattaataatggagttttagtaaatgttactaattttaccattaaaa 317  Q
    |||||||| |||||| ||| ||||||||| |||||||| |||| |||||||| |||||||||  | ||||||||||||| ||||||||||||||| ||||    
T  3689551 tattatacccttattaatttaatttcatctaacttaacaactcaactaactataattaataagagtgttttagtaaatgatactaattttaccatcaaaa 3689650  T
Q  318 tcaacacaattaatcatttccttaataattgtgcacaaatcttaaacgactaatatt 374  Q
    |||| ||||||||||||||| |||||||  || || ||| |||||||||||| ||||    
T  3689651 tcaatacaattaatcatttctttaataaccgtacataaaccttaaacgactattatt 3689707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 222 - 374
Target Start/End: Complemental strand, 38502610 - 38502458
Alignment:
Q  222 atactcttatttattgaatttcatcaaacttaactactccactaactacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaa 321  Q
    ||||||||||||||||||||| ||| |||||||||||| || |||||| |||||||||  |  ||||| |||||| ||||||||||||||| ||||||||    
T  38502610 atactcttatttattgaattttatccaacttaactactacattaactataattaataaaagtattttaataaatgatactaattttaccatcaaaatcaa 38502511  T
Q  322 cacaattaatcatttccttaataattgtgcacaaatcttaaacgactaatatt 374  Q
    |||||||||| ||||||||||||| | ||||  || |||||||||||| ||||    
T  38502510 cacaattaattatttccttaataactatgcatcaaccttaaacgactattatt 38502458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 163 - 365
Target Start/End: Complemental strand, 28501072 - 28500876
Alignment:
Q  163 ctcaaaataattgtcactttacaataccaatgcaatatttattannnnnnn--ccactattatactcttatttattgaatttcatcaaacttaactactc 260  Q
    ||||||||||||||| ||||| ||||||||| ||| ||||||||         ||| |||||||| |||||||||||||||||||||||||||||||       
T  28501072 ctcaaaataattgtctctttagaataccaatacaacatttattattttttttcccattattatacccttatttattgaatttcatcaaacttaacta--- 28500976  T
Q  261 cactaactacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaacacaattaatcatttccttaataattgtgcacaaatctt 360  Q
         ||| |||||||||| ||  |||||||||||| || ||||||||||||| ||||||||||||| |||||||||||||||||| |||||||||  ||    
T  28500975 -----actgcaattaataagggtattttagtaaatgatattaattttaccattgaaatcaacacaatcaatcatttccttaataatcgtgcacaaacatt 28500881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 163 - 366
Target Start/End: Original strand, 25233116 - 25233318
Alignment:
Q  163 ctcaaaataattgtcactttacaataccaatgcaatatttattannnnnnnccactattatactcttatttattgaatttcatcaaacttaactactcca 262  Q
    ||||||||||||||||||||| |||| |||||||| ||||||||       | | ||| |||   |||||||||||| |||||| |||||||||||| ||    
T  25233116 ctcaaaataattgtcactttagaatatcaatgcaacatttattatttttttc-attataatatctttatttattgaacttcatccaacttaactacttca 25233214  T
Q  263 ctaactacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaacacaattaatcatttccttaataattgtgcacaaatcttaa 362  Q
    ||||||| |||||||| | | ||||||||||||| ||||||||||||||| ||||| |||||||||||| ||||| ||||||| ||| ||  || |||||    
T  25233215 ctaactataattaatactagtgttttagtaaatgatactaattttaccatcaaaattaacacaattaattatttctttaataactgtacatcaaccttaa 25233314  T
Q  363 acga 366  Q
    ||||    
T  25233315 acga 25233318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 163 - 330
Target Start/End: Complemental strand, 26147805 - 26147635
Alignment:
Q  163 ctcaaaataattgtcactttacaataccaatgcaatatttatt--annnnnnnccactattatactcttatttattgaat-ttcatcaaacttaactact 259  Q
    ||||||||||||||||||||| ||||||||| ||| |||||||  |       ||| |||||||| |||||||||||||  |||||| ||||||| ||||    
T  26147805 ctcaaaataattgtcactttagaataccaatacaacatttattttatttttttccattattatacccttatttattgaaaattcatccaacttaattact 26147706  T
Q  260 ccactaactacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaacacaattaa 330  Q
    ||||||||||||||||||||    ||||||||||||| ||||||||||||||| |||||||||||||||||    
T  26147705 ccactaactacaattaataagaatgttttagtaaatgatactaattttaccatcaaaatcaacacaattaa 26147635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 214 - 369
Target Start/End: Complemental strand, 41711592 - 41711437
Alignment:
Q  214 ccactattatactcttatttattgaatttcatcaaacttaactactccactaactacaattaataatggagttttagtaaatgttactaattttaccatt 313  Q
    |||||||| ||  ||||||||||||||||||| ||||||||| ||||| |||| || |||||| ||||   |||||  ||||| || |||||||||||||    
T  41711592 ccactattgtatccttatttattgaatttcataaaacttaacaactccgctaaataaaattaaaaatgatattttaaaaaatgatattaattttaccatt 41711493  T
Q  314 aaaatcaacacaattaatcatttccttaataattgtgcacaaatcttaaacgacta 369  Q
    |||||||||| |||||||||||||| ||| ||||||||||||| ||||||| ||||    
T  41711492 aaaatcaacataattaatcatttccataaaaattgtgcacaaaccttaaacaacta 41711437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 163 - 279
Target Start/End: Original strand, 51624720 - 51624836
Alignment:
Q  163 ctcaaaataattgtcactttacaataccaatgcaatatttattannnnnnnccactattatactcttatttattgaatttcatcaaacttaactactcca 262  Q
    |||||||||||||||||||||||||| ||||| || ||||||||       ||||||| |||| |||||||||||||||||||| |||||||||||||||    
T  51624720 ctcaaaataattgtcactttacaatatcaatgtaacatttattatttttttccactatcatacccttatttattgaatttcatccaacttaactactcca 51624819  T
Q  263 ctaactacaattaataa 279  Q
    |||||||||| ||||||    
T  51624820 ctaactacaaataataa 51624836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 228 - 366
Target Start/End: Complemental strand, 11288751 - 11288614
Alignment:
Q  228 ttatttattgaatttcatcaaacttaactactccactaactacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaacacaat 327  Q
    ||||||||||||||| ||| |||||||||||||||| |||||||||||||||   | |||||||||||| || ||||||| ||||| ||||||| |||||    
T  11288751 ttatttattgaattttatccaacttaactactccaccaactacaattaataagata-ttttagtaaatgatattaattttgccattgaaatcaatacaat 11288653  T
Q  328 taatcatttccttaataattgtgcacaaatcttaaacga 366  Q
    ||||||||| ||||||||| || || ||| |||||||||    
T  11288652 taatcattttcttaataatcgtacataaaccttaaacga 11288614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 218 - 363
Target Start/End: Original strand, 461947 - 462092
Alignment:
Q  218 tattatactcttatttattgaatttcatcaaacttaactactccactaactacaattaataatggagttttagtaaatgttactaattttaccattaaaa 317  Q
    |||||||| ||||||| |||||||| ||  |||||||||||||| |||| |||||||||||| |   |||||||||||  || || |||||||||| |||    
T  461947 tattatacccttatttgttgaattttattcaacttaactactccgctaattacaattaataaggatattttagtaaataatattacttttaccattgaaa 462046  T
Q  318 tcaacacaattaatcatttccttaataattgtgcacaaatcttaaa 363  Q
    |||| |||||||||||||| ||||| |||| |||||||||||||||    
T  462047 tcaatacaattaatcattttcttaaaaattatgcacaaatcttaaa 462092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 284 - 369
Target Start/End: Original strand, 51625138 - 51625223
Alignment:
Q  284 gttttagtaaatgttactaattttaccattaaaatcaacacaattaatcatttccttaataattgtgcacaaatcttaaacgacta 369  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||| |||||||||  |||||||||||    
T  51625138 gttttagtaaatgttactaattttaccattgaaatcaacacaattaatcattttcttaataatcgtgcacaaactttaaacgacta 51625223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 166 - 376
Target Start/End: Complemental strand, 46397055 - 46396857
Alignment:
Q  166 aaaataattgtcactttacaataccaatgcaatatttattannnnnnnccactattatactcttatttattgaatttcatcaaacttaactactccacta 265  Q
    ||||||||||||||||||| |||| ||| ||| ||||||||       ||| |||||||| |||||||| ||||||| ||| |||||||               
T  46397055 aaaataattgtcactttacgatacgaatacaacatttattagttttttccattattatacccttatttaatgaattttatccaacttaa----------- 46396967  T
Q  266 actacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaacacaattaatcatttccttaataattgtgcacaaatcttaaacg 365  Q
     |||||||||||||  | ||||||||||||| || ||||||||||||| |||||||||||||||||||||| |||||| || ||||||||| ||||||||    
T  46396966 -ctacaattaataagagtgttttagtaaatgctattaattttaccattgaaatcaacacaattaatcatttacttaatgatcgtgcacaaaccttaaacg 46396868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 218 - 369
Target Start/End: Complemental strand, 30682328 - 30682177
Alignment:
Q  218 tattatactcttatttattgaatttcatcaaacttaactactccactaactacaattaataatggagttttagtaaatgttactaattttaccattaaaa 317  Q
    |||||| || ||||||||||||||||||  || |||||||||| ||||||||||| |||||| |   || ||||||||| || ||||||||||| |||||    
T  30682328 tattatgcttttatttattgaatttcattcaaattaactactctactaactacaactaataaggatattatagtaaatgatattaattttaccaataaaa 30682229  T
Q  318 tcaacacaattaatcatttccttaataattgtgcacaaatcttaaacgacta 369  Q
    | |||||||||||||||||  |||||| | ||||| ||| ||||||||||||    
T  30682228 ttaacacaattaatcatttttttaatagtcgtgcaaaaaccttaaacgacta 30682177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 218 - 356
Target Start/End: Complemental strand, 42517773 - 42517632
Alignment:
Q  218 tattatactcttatttattgaatttcatcaaacttaactactc---cactaactacaattaataatggagttttagtaaatgttactaattttaccatta 314  Q
    ||||||||| ||||||||||||||||||| ||||| |||| |    ||||||||| ||||||||| ||  |||||||||||| |  |||||||||||||     
T  42517773 tattatactgttatttattgaatttcatctaactttactagtatttcactaactataattaataagggtattttagtaaatgatcttaattttaccattg 42517674  T
Q  315 aaatcaacacaattaatcatttccttaataattgtgcacaaa 356  Q
    |||||||||||||||||||||| ||||||||| ||| |||||    
T  42517673 aaatcaacacaattaatcattttcttaataatcgtgtacaaa 42517632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 215 - 342
Target Start/End: Original strand, 53412094 - 53412221
Alignment:
Q  215 cactattatactcttatttattgaatttcatcaaacttaactactccactaactacaattaataatggagttttagtaaatgttactaattttaccatta 314  Q
    |||||||||||| ||||||||||||||||||| |||||||||| ||||| ||||| |||||||||     |||||||||||| ||||||||||||||||     
T  53412094 cactattatacttttatttattgaatttcatccaacttaactattccacaaactataattaataaaaatattttagtaaatgatactaattttaccattg 53412193  T
Q  315 aaatcaacacaattaatcatttccttaa 342  Q
    ||||||| | |||||||| ||| |||||    
T  53412194 aaatcaataaaattaatcgttttcttaa 53412221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 228 - 364
Target Start/End: Complemental strand, 32470069 - 32469934
Alignment:
Q  228 ttatttattgaatttcatcaaacttaactactccactaactacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaacacaat 327  Q
    ||||||||||||||| |||||||||||  |||  | |||||||| |||||||    |||||| |||||| ||||||||||||||||||||||||||||||    
T  32470069 ttatttattgaattt-atcaaacttaaaaactttattaactacagttaataagaatgttttaataaatgatactaattttaccattaaaatcaacacaat 32469971  T
Q  328 taatcatttccttaataattgtgcacaaatcttaaac 364  Q
    ||||||||| ||| | |||| |||| |||||||||||    
T  32469970 taatcattttctttaaaattatgcataaatcttaaac 32469934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 264 - 372
Target Start/End: Original strand, 52869107 - 52869215
Alignment:
Q  264 taactacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaacacaattaatcatttccttaataattgtgcacaaatcttaaa 363  Q
    |||||||||||||||| ||  ||||| |||| | || |||| |||| ||| ||||||||||||||||| |||||||||||||||||||||||| ||||||    
T  52869107 taactacaattaataaaggtattttaataaacgatattaatcttactattgaaatcaacacaattaattatttccttaataattgtgcacaaaccttaaa 52869206  T
Q  364 cgactaata 372  Q
    |||||||||    
T  52869207 cgactaata 52869215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 214 - 376
Target Start/End: Complemental strand, 38663583 - 38663422
Alignment:
Q  214 ccactattatactcttatttattgaatttcatcaaacttaactactccactaactacaattaataatggagttttagtaaatgttactaattttaccatt 313  Q
    |||||||| ||| | |||||||| ||||||||| ||||||||||||  ||||||||| ||||||||  | ||||||||||||| ||||||||||||||||    
T  38663583 ccactattgtacccatatttattaaatttcatccaacttaactactttactaactacgattaataaaagtgttttagtaaatgctactaattttaccatt 38663484  T
Q  314 aaaatcaacacaattaatcatttccttaataattgtgcacaaatcttaaacgactaatattgt 376  Q
     ||| ||||  |||||| | |||   ||||||| || || ||| |||||||||||||||||||    
T  38663483 gaaaacaacggaattaaccgtttttgtaataatcgttca-aaaccttaaacgactaatattgt 38663422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 217 - 329
Target Start/End: Original strand, 7986962 - 7987074
Alignment:
Q  217 ctattatactcttatttattgaatttcatcaaacttaactactccactaactacaattaataatggagttttagtaaatgttactaattttaccattaaa 316  Q
    |||||||||| ||||||||| |||||||| |||||||||||||| |||||| | ||||||||||    |||||||| ||| ||||||||||| |||||||    
T  7986962 ctattatacttttatttatttaatttcattaaacttaactactctactaacaataattaataataatattttagtagatgatactaattttatcattaaa 7987061  T
Q  317 atcaacacaatta 329  Q
    |||||||| ||||    
T  7987062 atcaacactatta 7987074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 224 - 345
Target Start/End: Complemental strand, 23915555 - 23915435
Alignment:
Q  224 actcttatttattgaatttca-tcaaacttaactactccactaactacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaac 322  Q
    |||||||||||||| |||||| |||  | |||||||||||||||||| |||||||||||  ||||||||||||   ||  ||||||||||||||||||||    
T  23915555 actcttatttattgtatttcaatca--cctaactactccactaactataattaataatgatgttttagtaaattaaacatattttaccattaaaatcaac 23915458  T
Q  323 acaattaatcatttccttaataa 345  Q
    || | ||||||||||||||||||    
T  23915457 actactaatcatttccttaataa 23915435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 215 - 346
Target Start/End: Original strand, 35998798 - 35998928
Alignment:
Q  215 cactattatactcttatttattgaatttcatcaaacttaactactccactaactacaattaataatggagttttagtaaatgttactaattttaccatta 314  Q
    ||||||||||   |||||||||||||| |||| |||||||||||||||  |||||||||||||||||   ||||| |||||||||||||||||||  |||    
T  35998798 cactattatatctttatttattgaatt-catccaacttaactactccatcaactacaattaataatgatattttaataaatgttactaattttactgtta 35998896  T
Q  315 aaatcaacacaattaatcatttccttaataat 346  Q
    ||||||||| || |||| ||||  ||||||||    
T  35998897 aaatcaacataaataataatttttttaataat 35998928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 216 - 330
Target Start/End: Complemental strand, 18741608 - 18741494
Alignment:
Q  216 actattatactcttatttattgaatttcatcaaacttaactactccactaactacaattaataatggagttttagtaaatgttactaattttaccattaa 315  Q
    |||||||||  |||||||||||||||||||| ||||||||||||||| |||||||||||||||| |   ||||| ||||||  |||||||||||| || |    
T  18741608 actattataaacttatttattgaatttcatccaacttaactactccattaactacaattaataaagatattttaataaatgacactaattttaccgttga 18741509  T
Q  316 aatcaacacaattaa 330  Q
    |||||| | ||||||    
T  18741508 aatcaatataattaa 18741494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 218 - 376
Target Start/End: Original strand, 39397333 - 39397491
Alignment:
Q  218 tattatactcttatttattgaatttcatcaaacttaactactccactaactacaattaataatggagttttagtaaatgttactaattttaccattaaaa 317  Q
    |||||||| |||||||||| ||||||||| |  ||||||| || | |||||||||||||||  ||  ||||||||||||  | ||| ||||||| | |||    
T  39397333 tattatacccttatttattaaatttcatccattttaactaatctagtaactacaattaatatggggattttagtaaatgacattaaatttaccaatgaaa 39397432  T
Q  318 tcaacacaattaatcatttccttaataattgtgcacaaatcttaaacgactaatattgt 376  Q
    |||||| ||||||||||||||||||  || |||||||||  |||||||| || ||||||    
T  39397433 tcaacataattaatcatttccttaaacatcgtgcacaaactttaaacgattattattgt 39397491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 220 - 362
Target Start/End: Complemental strand, 48914278 - 48914131
Alignment:
Q  220 ttatactcttatttattgaatttcatcaaacttaactactccactaactacaattaataatggagttttagtaaatgtt-----actaattttaccatta 314  Q
    |||||| || |||||||||||||||| |||||||| |||| |||||||||||| |||||| |   |||||||| ||| |     |||||||||||||||     
T  48914278 ttataccctaatttattgaatttcattaaacttaattacttcactaactacaaataataaggatattttagtatatgatggagtactaattttaccattg 48914179  T
Q  315 aaatcaacacaattaatcatttccttaataattgtgcacaaatcttaa 362  Q
    |||| |||||||||||| |||||||||| || |||||| ||| |||||    
T  48914178 aaatgaacacaattaattatttccttaaaaactgtgcataaaccttaa 48914131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 163 - 366
Target Start/End: Complemental strand, 49579363 - 49579162
Alignment:
Q  163 ctcaaaataattgtcactttacaataccaatgcaatatttattannnnnnnccactattatactcttatttattgaatttcatcaaacttaactactcca 262  Q
    ||||||||||||||||||||| |||| ||||||||||||| |||         |||| || | ||||||||||||||||||||| |||||||| | | ||    
T  49579363 ctcaaaataattgtcactttaaaatatcaatgcaatattt-ttatttttttt-actagtacattcttatttattgaatttcatccaacttaacaatttca 49579266  T
Q  263 ctaactacaattaataatggagttttagtaaatgttactaattttaccatt-aaaatcaacacaattaatcatttccttaataattgtgcacaaatctta 361  Q
     ||||||||||||||||  | |||||||| |||  || |||||||| |||| |||||||||||||||||||||||  |||| |||  ||||||||  |||    
T  49579265 ataactacaattaataaaagtgttttagt-aataataataattttatcattaaaaatcaacacaattaatcatttatttaaaaatcatgcacaaacttta 49579167  T
Q  362 aacga 366  Q
    |||||    
T  49579166 aacga 49579162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 218 - 328
Target Start/End: Complemental strand, 50264212 - 50264102
Alignment:
Q  218 tattatactcttatttattgaatttcatcaaacttaactactccactaactacaattaataatggagttttagtaaatgttactaattttaccattaaaa 317  Q
    |||||||| |||||||||||||||||||  ||||||| || | |||||||||||||||||||  |  |||||||||||| |  |||||||| |||| |||    
T  50264212 tattatacccttatttattgaatttcattcaacttaaatatttcactaactacaattaataagagtattttagtaaatgatgttaattttaacattgaaa 50264113  T
Q  318 tcaacacaatt 328  Q
    |||||||||||    
T  50264112 tcaacacaatt 50264102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 221 - 336
Target Start/End: Complemental strand, 20612300 - 20612185
Alignment:
Q  221 tatactcttatttattgaatttcatcaaacttaactactccactaactacaattaataatggagttttagtaaatgttactaattttaccattaaaatca 320  Q
    |||||| |||||||||||||||||    ||||||||||| || || |||||||||||||||| ||||||||||||  |||||| |||| || | ||||||    
T  20612300 tatactattatttattgaatttcaattcacttaactacttcattatctacaattaataatggtgttttagtaaattatactaactttagcaatgaaatca 20612201  T
Q  321 acacaattaatcattt 336  Q
    || ||| |||||||||    
T  20612200 actcaactaatcattt 20612185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 214 - 341
Target Start/End: Complemental strand, 47359085 - 47358958
Alignment:
Q  214 ccactattatactcttatttattgaatttcatcaaacttaactactccactaactacaattaataatggagttttagtaaatgttactaattttaccatt 313  Q
    ||||||||  || |||||||||||||||||||  ||||||| ||||||||| ||||||||||||||  |  |||||| ||||  | ||||||||| ||||    
T  47359085 ccactattgcacccttatttattgaatttcattcaacttaattactccactgactacaattaataaaagtattttagaaaattattctaattttatcatt 47358986  T
Q  314 aaaatcaacacaattaatcatttcctta 341  Q
     ||||||||||||| ||| |||| ||||    
T  47358985 gaaatcaacacaatcaataattttctta 47358958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 166 - 257
Target Start/End: Complemental strand, 28911340 - 28911249
Alignment:
Q  166 aaaataattgtcactttacaataccaatgcaatatttattannnnnnnccactattatactcttatttattgaatttcatcaaacttaacta 257  Q
    ||||||||||||  |||| |||| |||||||| ||||||||       ||| ||||||||||||||||||||||||||||||||||||||||    
T  28911340 aaaataattgtcgatttagaatatcaatgcaacatttattatttttttccattattatactcttatttattgaatttcatcaaacttaacta 28911249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 264 - 374
Target Start/End: Original strand, 29575143 - 29575253
Alignment:
Q  264 taactacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaacacaattaatcatttccttaataattgtgcacaaatcttaaa 363  Q
    ||||||||||||| ||  |  ||||| ||||||||| |||||||| |||| |||| |||| |||||||||||| |||| |||| ||| |||||| |||||    
T  29575143 taactacaattaacaagagtattttaataaatgttattaattttatcatttaaattaacataattaatcattttcttagtaatcgtgtacaaattttaaa 29575242  T
Q  364 cgactaatatt 374  Q
    |||||||||||    
T  29575243 cgactaatatt 29575253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 163 - 279
Target Start/End: Original strand, 10754308 - 10754423
Alignment:
Q  163 ctcaaaataattgtcactttacaataccaatgcaatatttattannnnnnnccactattatactcttatttattgaatttcatcaaacttaactactcca 262  Q
    |||||||||||||||| | || ||||||||||||| | ||||||       | || |||||||||||||||||| ||||||||  ||||||| || ||||    
T  10754308 ctcaaaataattgtcaatctaaaataccaatgcaacaattattatttttc-caaccattatactcttatttattaaatttcattcaacttaattattcca 10754406  T
Q  263 ctaactacaattaataa 279  Q
    |||||||||||||||||    
T  10754407 ctaactacaattaataa 10754423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 163 - 279
Target Start/End: Original strand, 10968077 - 10968192
Alignment:
Q  163 ctcaaaataattgtcactttacaataccaatgcaatatttattannnnnnnccactattatactcttatttattgaatttcatcaaacttaactactcca 262  Q
    |||||||||||||||| | || ||||||||||||| | ||||||       | || |||||||||||||||||| ||||||||  ||||||| || ||||    
T  10968077 ctcaaaataattgtcaatctaaaataccaatgcaacaattattatttttc-caaccattatactcttatttattaaatttcattcaacttaattattcca 10968175  T
Q  263 ctaactacaattaataa 279  Q
    |||||||||||||||||    
T  10968176 ctaactacaattaataa 10968192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 303 - 349
Target Start/End: Complemental strand, 34321758 - 34321712
Alignment:
Q  303 attttaccattaaaatcaacacaattaatcatttccttaataattgt 349  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||    
T  34321758 attttaccattaaaatcaacacaattaatcattttcttaataattgt 34321712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 167 - 366
Target Start/End: Original strand, 19265744 - 19265945
Alignment:
Q  167 aaataattgtcactttacaataccaatgcaatatttattannnnnnnccactat--tatactcttatttattgaatttcatcaaacttaactactccact 264  Q
    ||||||||||||||||| ||||| ||||||| ||||| ||       ||| |||  || || |||| ||||||||||||||  |||||||||||||||||    
T  19265744 aaataattgtcactttagaatactaatgcaacatttagtatttttttccattatattacacccttaattattgaatttcattcaacttaactactccact 19265843  T
Q  265 aactacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaacacaattaatcatttccttaataattgtgcacaaatcttaaac 364  Q
    ||||| ||||||||| |   ||||| |||||   | ||||||||  ||| |||| || | |||||||||||| ||||||||  ||||| |||  ||||||    
T  19265844 aactataattaataaggttattttaataaataacattaattttattattgaaataaatataattaatcattttcttaataaccgtgcagaaagtttaaac 19265943  T
Q  365 ga 366  Q
    ||    
T  19265944 ga 19265945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 215 - 343
Target Start/End: Original strand, 43902237 - 43902368
Alignment:
Q  215 cactattatactcttatttattgaatttcatcaaacttaactactccactaactacaattaataatggagttttagta---aatgttactaattttacca 311  Q
    ||||||||| | |||||||||||||||||||  ||||||| ||||||||||||||  ||||||||     ||||| ||   |||  || |||||||| ||    
T  43902237 cactattatgcccttatttattgaatttcatgcaacttaattactccactaactatgattaataagaatattttaataaataataatattaattttatca 43902336  T
Q  312 ttaaaatcaacacaattaatcatttccttaat 343  Q
    |||||||||||| ||||||||||| |||||||    
T  43902337 ttaaaatcaacataattaatcattgccttaat 43902368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 228 - 301
Target Start/End: Original strand, 44526378 - 44526451
Alignment:
Q  228 ttatttattgaatttcatcaaacttaactactccactaactacaattaataatggagttttagtaaatgttact 301  Q
    ||||||||| ||||||||| ||||| |||| ||||||||||||||||||||| |  |||||| |||||||||||    
T  44526378 ttatttattaaatttcatccaacttcactattccactaactacaattaataaggatgttttaataaatgttact 44526451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 218 - 369
Target Start/End: Original strand, 35251888 - 35252029
Alignment:
Q  218 tattatactcttatttattgaatttcatcaaacttaactactccactaactacaattaataatggagttttagtaaatgttactaattttaccattaaaa 317  Q
    |||||||  |||||||||||||||||||| ||||||| |||||||||||          ||||||  |||||||||||| || |||||||| |||| |||    
T  35251888 tattatatccttatttattgaatttcatctaacttaattactccactaa----------taatggtattttagtaaatgatattaattttatcattgaaa 35251977  T
Q  318 tcaacacaattaatcatttccttaataattgtgcacaaatcttaaacgacta 369  Q
    | | |||||||||| |||| ||| | |||  ||||||||||| |||||||||    
T  35251978 taaccacaattaattattttcttgaaaatcatgcacaaatctcaaacgacta 35252029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 265 - 336
Target Start/End: Complemental strand, 17512424 - 17512353
Alignment:
Q  265 aactacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaacacaattaatcattt 336  Q
    ||||||||||||||||||  |||||||||||  || |||||||||| ||||||||||| ||| |||||||||    
T  17512424 aactacaattaataatggtattttagtaaattatattaattttacctttaaaatcaactcaactaatcattt 17512353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 218 - 277
Target Start/End: Complemental strand, 31370432 - 31370373
Alignment:
Q  218 tattatactcttatttattgaatttcatcaaacttaactactccactaactacaattaat 277  Q
    ||||||||  ||||||||||| ||||||| |||||||||||||||||||||| |||||||    
T  31370432 tattatacatttatttattgattttcatccaacttaactactccactaactataattaat 31370373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 13 - 63
Target Start/End: Complemental strand, 22867041 - 22866991
Alignment:
Q  13 aaggcaaactaaaggccgcaattaagacgactaggggcgggccacaataaa 63  Q
    |||||||||||||||||||||||||| ||||||||||| | ||||||||||    
T  22867041 aaggcaaactaaaggccgcaattaaggcgactaggggcagaccacaataaa 22866991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 228 - 341
Target Start/End: Original strand, 2400777 - 2400890
Alignment:
Q  228 ttatttattgaatttcatcaaacttaactactccactaactacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaacacaat 327  Q
    ||||||||||||||| || | ||||||||||||||| ||||||||| ||| | || ||||||||||||  |  ||||| |||||||| ||| || ||||     
T  2400777 ttatttattgaattttattatacttaactactccacaaactacaatcaatgagggtgttttagtaaataatgttaattgtaccattataattaatacaac 2400876  T
Q  328 taatcatttcctta 341  Q
    | ||||||| ||||    
T  2400877 tgatcattttctta 2400890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 290 - 343
Target Start/End: Complemental strand, 21325224 - 21325171
Alignment:
Q  290 gtaaatgttactaattttaccattaaaatcaacacaattaatcatttccttaat 343  Q
    ||||||| |||||||||||||||| |||| ||||||||| ||||||||||||||    
T  21325224 gtaaatgatactaattttaccattgaaataaacacaatttatcatttccttaat 21325171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 219 - 279
Target Start/End: Original strand, 10672643 - 10672703
Alignment:
Q  219 attatactcttatttattgaatttcatcaaacttaactactccactaactacaattaataa 279  Q
    |||||||||||||||||||||||||||| |||||||||| | || | |||| |||||||||    
T  10672643 attatactcttatttattgaatttcatccaacttaactatttcattgactaaaattaataa 10672703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 219 - 279
Target Start/End: Original strand, 10886283 - 10886343
Alignment:
Q  219 attatactcttatttattgaatttcatcaaacttaactactccactaactacaattaataa 279  Q
    |||||||||||||||||||||||||||| |||||||||| | || | |||| |||||||||    
T  10886283 attatactcttatttattgaatttcatccaacttaactatttcattgactaaaattaataa 10886343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 230 - 374
Target Start/End: Original strand, 18532180 - 18532324
Alignment:
Q  230 atttattgaatttcatcaaacttaactactccactaactacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaacacaatta 329  Q
    |||||||||||||||||  | ||||| |||||||| |||| |||||||||     ||||| |||||  |||||||||||||||||||||  | | |||||    
T  18532180 atttattgaatttcatcctagttaaccactccacttactataattaataaaactattttaataaatcatactaattttaccattaaaatttatataatta 18532279  T
Q  330 atcatttccttaataattgtgcacaaatcttaaacgactaatatt 374  Q
    |||||||   ||| |||  |||||||| ||||||| |||| ||||    
T  18532280 atcatttatgtaaaaatcatgcacaaaccttaaacaactattatt 18532324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 314 - 369
Target Start/End: Complemental strand, 50263968 - 50263913
Alignment:
Q  314 aaaatcaacacaattaatcatttccttaataattgtgcacaaatcttaaacgacta 369  Q
    |||||||||||| | |||||||| ||||||||| ||||||||| ||||||||||||    
T  50263968 aaaatcaacacagtgaatcattttcttaataatcgtgcacaaaccttaaacgacta 50263913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 301 - 367
Target Start/End: Original strand, 5618614 - 5618680
Alignment:
Q  301 taattttaccattaaaatcaacacaattaatcatttccttaataattgtgcacaaatcttaaacgac 367  Q
    |||||||||||||||||||||||||| | |||||||  |||||||| | |||||||  |||||||||    
T  5618614 taattttaccattaaaatcaacacaactcatcatttttttaataatcgagcacaaacattaaacgac 5618680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 285 - 355
Target Start/End: Complemental strand, 8175645 - 8175575
Alignment:
Q  285 ttttagtaaatgttactaattttaccattaaaatcaacacaattaatcatttccttaataattgtgcacaa 355  Q
    ||||| |||||| || ||||||||||||| ||||||||||||||| ||||||  ||||||||  |||||||    
T  8175645 ttttaataaatgatattaattttaccattgaaatcaacacaattattcatttttttaataatcatgcacaa 8175575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 288 - 374
Target Start/End: Complemental strand, 27880303 - 27880218
Alignment:
Q  288 tagtaaatgttactaattttaccattaaaatcaacacaattaatcatttccttaataattgtgcacaaatcttaaacgactaatatt 374  Q
    ||||||||| |||||||||||||||| |||||||||||| |||||||||  |||| |||  |  ||||| |||||||||||| ||||    
T  27880303 tagtaaatgatactaattttaccattgaaatcaacacaa-taatcatttatttaaaaatcatatacaaaccttaaacgactattatt 27880218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 166 - 253
Target Start/End: Original strand, 29295163 - 29295254
Alignment:
Q  166 aaaataattgtcactttacaataccaatgcaatatttattannnnnnn----ccactattatactcttatttattgaatttcatcaaactta 253  Q
    ||||||||| |||||||| |||||||||||| |||||||||           ||| ||| ||||||||||||||||||||||||||||||||    
T  29295163 aaaataattatcactttagaataccaatgcagtatttattattttttttcttccattataatactcttatttattgaatttcatcaaactta 29295254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 251 - 356
Target Start/End: Original strand, 30192227 - 30192332
Alignment:
Q  251 ttaactactccactaactacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaacacaattaatcatttccttaataattgtg 350  Q
    |||| ||||| ||||||||||||||||||     |||||| |||||  | ||||||||  ||| |||||||||||||||||||||| ||||| ||| |||    
T  30192227 ttaattactctactaactacaattaataagaatattttagcaaatgacattaattttataattgaaatcaacacaattaatcattttcttaaaaatcgtg 30192326  T
Q  351 cacaaa 356  Q
     |||||    
T  30192327 tacaaa 30192332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 229 - 274
Target Start/End: Complemental strand, 43967656 - 43967611
Alignment:
Q  229 tatttattgaatttcatcaaacttaactactccactaactacaatt 274  Q
    ||||||||||||||||||||||||||||| || ||| |||||||||    
T  43967656 tatttattgaatttcatcaaacttaactattctactgactacaatt 43967611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 301 - 369
Target Start/End: Complemental strand, 16411416 - 16411348
Alignment:
Q  301 taattttaccattaaaatcaacacaattaatcatttccttaataattgtgcacaaatcttaaacgacta 369  Q
    |||||||| |||| ||||||||| ||||||| |||| ||| | || || ||||||||||||||||||||    
T  16411416 taattttatcattgaaatcaacataattaattattttctttaaaactgggcacaaatcttaaacgacta 16411348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #87
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 166 - 206
Target Start/End: Complemental strand, 21698693 - 21698653
Alignment:
Q  166 aaaataattgtcactttacaataccaatgcaatatttatta 206  Q
    |||||||||||||||||| |||| |||||||||||||||||    
T  21698693 aaaataattgtcactttaaaatatcaatgcaatatttatta 21698653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #88
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 227 - 279
Target Start/End: Complemental strand, 25142502 - 25142450
Alignment:
Q  227 cttatttattgaatttcatcaaacttaactactccactaactacaattaataa 279  Q
    |||||||||||||||||||| |||||||||||  |||||||| |||| |||||    
T  25142502 cttatttattgaatttcatccaacttaactacatcactaactgcaatcaataa 25142450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #89
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 292 - 336
Target Start/End: Complemental strand, 25869902 - 25869858
Alignment:
Q  292 aaatgttactaattttaccattaaaatcaacacaattaatcattt 336  Q
    |||||||||||||||||  ||| ||||||||||||||||||||||    
T  25869902 aaatgttactaattttaaaattgaaatcaacacaattaatcattt 25869858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #90
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 343 - 391
Target Start/End: Original strand, 31919785 - 31919833
Alignment:
Q  343 taattgtgcacaaatcttaaacgactaatattgtttgacggaggtagta 391  Q
    |||| |||||||||||||||||||||||||||||  |||||||| ||||    
T  31919785 taatggtgcacaaatcttaaacgactaatattgtgagacggaggaagta 31919833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #91
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 251 - 346
Target Start/End: Complemental strand, 39157973 - 39157877
Alignment:
Q  251 ttaactactccactaactacaattaataatggagttttagtaaatgttactaattttaccattaaaa-tcaacacaattaatcatttccttaataat 346  Q
    |||||||||| |||| ||| |||||||||  |  ||||||||||||  || ||||||||||| |||| | ||||||| ||||||||| |||||||||    
T  39157973 ttaactactctactagctataattaataagtgtattttagtaaatgaaacaaattttaccatcaaaattaaacacaactaatcattttcttaataat 39157877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #92
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 220 - 319
Target Start/End: Original strand, 54202187 - 54202289
Alignment:
Q  220 ttatactcttatttattgaatttcatcaaacttaactactccactaactacaattaat---aatggagttttagtaaatgttactaattttaccattaaa 316  Q
    ||||| |||||||||||||||||||||  ||| || |||| |||||| ||||||||||   |||    ||||| |||||| || ||||||||||||||||    
T  54202187 ttatattcttatttattgaatttcatcccactcaattacttcactaattacaattaataaaaataatattttaataaatgatattaattttaccattaaa 54202286  T
Q  317 atc 319  Q
    |||    
T  54202287 atc 54202289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #93
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 315 - 374
Target Start/End: Original strand, 3669965 - 3670024
Alignment:
Q  315 aaatcaacacaattaatcatttccttaataattgtgcacaaatcttaaacgactaatatt 374  Q
    ||||||||||||||||||||||  |||| |||  |||| |||||||||||||||| ||||    
T  3669965 aaatcaacacaattaatcatttttttaaaaatcatgcataaatcttaaacgactattatt 3670024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #94
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 252 - 343
Target Start/End: Complemental strand, 11024988 - 11024897
Alignment:
Q  252 taactactccactaactacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaacacaattaatcatttccttaat 343  Q
    |||||||| |||||| || |||||||||     ||||||||||||  ||  ||| |||||||||||||||||| ||||||||||| ||||||    
T  11024988 taactacttcactaattataattaataaaaatattttagtaaatgaaacatattataccattaaaatcaacactattaatcattttcttaat 11024897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #95
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 251 - 302
Target Start/End: Complemental strand, 16506332 - 16506281
Alignment:
Q  251 ttaactactccactaactacaattaataatggagttttagtaaatgttacta 302  Q
    |||| ||||||| ||||||||||||||||  | |||||||||||||||||||    
T  16506332 ttaattactccattaactacaattaataaatgtgttttagtaaatgttacta 16506281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #96
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 284 - 323
Target Start/End: Original strand, 29295268 - 29295307
Alignment:
Q  284 gttttagtaaatgttactaattttaccattaaaatcaaca 323  Q
    ||||||||||||| ||||||||||||||| ||||||||||    
T  29295268 gttttagtaaatgatactaattttaccataaaaatcaaca 29295307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #97
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 221 - 279
Target Start/End: Original strand, 30260996 - 30261054
Alignment:
Q  221 tatactcttatttattgaatttcatcaaacttaactactccactaactacaattaataa 279  Q
    |||| |||||||||||||||||||    |||||||||||| ||||| ||||||||||||    
T  30260996 tatagtcttatttattgaatttcactctacttaactactctactaattacaattaataa 30261054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #98
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 163 - 193
Target Start/End: Complemental strand, 54921802 - 54921772
Alignment:
Q  163 ctcaaaataattgtcactttacaataccaat 193  Q
    |||||||||||||||||||||||||||||||    
T  54921802 ctcaaaataattgtcactttacaataccaat 54921772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #99
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 219 - 255
Target Start/End: Complemental strand, 10699540 - 10699504
Alignment:
Q  219 attatactcttatttattgaatttcatcaaacttaac 255  Q
    |||||||||||||||||| ||||||||| ||||||||    
T  10699540 attatactcttatttattaaatttcatccaacttaac 10699504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #100
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 219 - 255
Target Start/End: Complemental strand, 10913310 - 10913274
Alignment:
Q  219 attatactcttatttattgaatttcatcaaacttaac 255  Q
    |||||||||||||||||| ||||||||| ||||||||    
T  10913310 attatactcttatttattaaatttcatccaacttaac 10913274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #101
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 314 - 374
Target Start/End: Original strand, 13016403 - 13016463
Alignment:
Q  314 aaaatcaacacaattaatcatttccttaataattgtgcacaaatcttaaacgactaatatt 374  Q
    |||||||||  |||||||||||||||||| || ||||| |||| ||||||| |||| ||||    
T  13016403 aaaatcaaccaaattaatcatttccttaaaaactgtgctcaaaccttaaacaactattatt 13016463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #102
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 285 - 369
Target Start/End: Original strand, 20598169 - 20598253
Alignment:
Q  285 ttttagtaaatgttactaattttaccattaaaatcaacacaattaatcatttccttaataattgtgcacaaatcttaaacgacta 369  Q
    |||||||| ||| || ||||| ||| ||| ||||||||| |||||| |||||| |||| | | ||| ||||||||||||| ||||    
T  20598169 ttttagtagatgatattaattatacaattgaaatcaacaaaattaaacatttctttaaaagtcgtgtacaaatcttaaacaacta 20598253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #103
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 166 - 206
Target Start/End: Original strand, 20681406 - 20681446
Alignment:
Q  166 aaaataattgtcactttacaataccaatgcaatatttatta 206  Q
    |||||||||||||||||| |||| |||| ||||||||||||    
T  20681406 aaaataattgtcactttaaaatatcaatacaatatttatta 20681446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #104
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 297 - 337
Target Start/End: Original strand, 31257517 - 31257557
Alignment:
Q  297 ttactaattttaccattaaaatcaacacaattaatcatttc 337  Q
    ||||||||||||| ||||||||||| | |||||||||||||    
T  31257517 ttactaattttacaattaaaatcaataaaattaatcatttc 31257557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 116; Significance: 7e-59; HSPs: 63)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 116; E-Value: 7e-59
Query Start/End: Original strand, 163 - 391
Target Start/End: Complemental strand, 31894387 - 31894162
Alignment:
Q  163 ctcaaaataattgtcactttacaataccaatgcaatatttattannnnnnnccactattatactcttatttattgaatttcatcaaacttaactactcca 262  Q
    |||||||||| ||||| ||||||||| |||||||| ||||||||        ||||||||||| |||||||||| ||||||||| |||||||||||| ||    
T  31894387 ctcaaaataaatgtca-tttacaatatcaatgcaacatttattatttttt--cactattatacccttatttattaaatttcatccaacttaactacttca 31894291  T
Q  263 ctaactacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaacacaattaatcatttccttaataattgtgcacaaatcttaa 362  Q
    |||||||||||||||||||  ||||||||||||| |||||||||||||||| |||||||||||||||||||||| |||||||||  | ||||||||||||    
T  31894290 ctaactacaattaataatgacgttttagtaaatgctactaattttaccattgaaatcaacacaattaatcattttcttaataatcatacacaaatcttaa 31894191  T
Q  363 acgactaatattgtttgacggaggtagta 391  Q
    |||| |||||||||  |||||||| ||||    
T  31894190 acgattaatattgtgagacggagggagta 31894162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 163 - 374
Target Start/End: Original strand, 29363238 - 29363451
Alignment:
Q  163 ctcaaaataattgtcactttacaataccaatgcaatatttattannnnnnn--ccactattatactcttatttattgaatttcatcaaacttaactactc 260  Q
    ||||||||||||||||||| | ||||||||||||  ||||||||         ||| ||||||||||||||||||||||||||||| |||||||||| ||    
T  29363238 ctcaaaataattgtcacttcagaataccaatgcagcatttattattattttttccattattatactcttatttattgaatttcatccaacttaactaatc 29363337  T
Q  261 cactaactacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaacacaattaatcatttccttaataattgtgcacaaatctt 360  Q
    | ||||||||||||||||| |  ||||||||||||| ||||| ||||||||| ||||||||||||||||||||||| ||||||||||||||| ||| |||    
T  29363338 cgctaactacaattaataaggatgttttagtaaatgatactagttttaccatcaaaatcaacacaattaatcattttcttaataattgtgcataaacctt 29363437  T
Q  361 aaacgactaatatt 374  Q
    ||||||||| ||||    
T  29363438 aaacgactattatt 29363451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 163 - 368
Target Start/End: Complemental strand, 11656127 - 11655921
Alignment:
Q  163 ctcaaaataattgtcactttacaataccaatgcaatatttattannnnnnncc-actattatactcttatttattgaatttcatcaaacttaactactcc 261  Q
    ||||||||||||||||||||| |||| |||||||  ||||||||       || | |||||||| |||||||||||||||||||| ||||| ||||||||    
T  11656127 ctcaaaataattgtcactttagaatatcaatgcagcatttattatttttttcccattattatacccttatttattgaatttcatccaactttactactcc 11656028  T
Q  262 actaactacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaacacaattaatcatttccttaataattgtgcacaaatctta 361  Q
    |||||||||||||||||| || |||||||||||||  |||||||||||||| ||||||||||||||||||||||| ||||||||  ||||| ||| ||||    
T  11656027 actaactacaattaataagggtgttttagtaaatgacactaattttaccatcaaaatcaacacaattaatcattttcttaataaccgtgcataaacctta 11655928  T
Q  362 aacgact 368  Q
    |||||||    
T  11655927 aacgact 11655921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 163 - 376
Target Start/End: Original strand, 181491 - 181702
Alignment:
Q  163 ctcaaaataattgtcactttacaataccaatgcaatatttattannnnnnnccactattatactcttatttattgaatttcatcaaacttaactactcca 262  Q
    ||||||||||||||||||||||||||| ||||||| ||||||||        ||||||||||| |||||||||||||||||||| |||||||||||||||    
T  181491 ctcaaaataattgtcactttacaatac-aatgcaacatttattattatttttcactattatacccttatttattgaatttcatccaacttaactactcca 181589  T
Q  263 ctaactacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaacacaattaatcatttccttaataattgtgcacaaatcttaa 362  Q
    ||||||| |||||||||||  ||||||||||||  |||||||||||| ||| ||||||| ||||||||| ||||  |||||||| |||| |||| ||||     
T  181590 ctaactataattaataatgatgttttagtaaatactactaattttactattgaaatcaatacaattaat-atttttttaataatcgtgctcaaaccttag 181688  T
Q  363 acgactaatattgt 376  Q
    ||||||||||||||    
T  181689 acgactaatattgt 181702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 163 - 376
Target Start/End: Complemental strand, 3720421 - 3720208
Alignment:
Q  163 ctcaaaataattgtcactttacaataccaatgcaatatttattannnnnnnccactattatactcttatttattgaatttcatcaaacttaactactcca 262  Q
    |||||||||||||||| |||||||| ||||||||  |||||||        ||||||||||||||||||||| ||||||||||  |||||||||| ||||    
T  3720421 ctcaaaataattgtcaatttacaatgccaatgcatcatttatttttcccccccactattatactcttatttactgaatttcattcaacttaactattcca 3720322  T
Q  263 ctaactacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaacacaattaatcatttccttaataattgtgcacaaatcttaa 362  Q
    |||||||||||||||||  | ||||| ||||||  ||| |||||||  ||| ||||||||||||||||||||||| |||||||| ||||||||| |||||    
T  3720321 ctaactacaattaataagagtgtttttgtaaatactacaaattttataattgaaatcaacacaattaatcatttcattaataatcgtgcacaaaccttaa 3720222  T
Q  363 acgactaatattgt 376  Q
    ||||||||||||||    
T  3720221 acgactaatattgt 3720208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 163 - 374
Target Start/End: Original strand, 30716833 - 30717045
Alignment:
Q  163 ctcaaaataattgtcactttacaataccaatgcaatatttattannnnnnn-ccactattatactcttatttattgaatttcatcaaacttaactactcc 261  Q
    ||||||||||||||||||||| ||||||| ||||| ||||||||        ||| ||| ||||||||||||||||||||| ||| ||||| ||||||||    
T  30716833 ctcaaaataattgtcactttagaataccagtgcaacatttattattttttttccattataatactcttatttattgaattttatccaactttactactcc 30716932  T
Q  262 actaactacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaacacaattaatcatttccttaataattgtgcacaaatctta 361  Q
    |||||||||||||||||| || |||| |||||||| ||||||||||||||| ||| |||| | ||||||||||||||||||||| ||||||  |||||||    
T  30716933 actaactacaattaataagggtgtttaagtaaatgatactaattttaccatcaaagtcaataaaattaatcatttccttaataactgtgcatcaatctta 30717032  T
Q  362 aacgactaatatt 374  Q
    |||||||| ||||    
T  30717033 aacgactattatt 30717045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 166 - 375
Target Start/End: Original strand, 15058055 - 15058263
Alignment:
Q  166 aaaataattgtcactttacaataccaatgcaatatttattannnnnnnccactattatactcttatttattgaatttcatcaaacttaactactccacta 265  Q
    |||||||||||||||||| |||||| |||||| ||||||||         |||||||||| |||||||||||||||||||| ||||||| |||| |||||    
T  15058055 aaaataattgtcactttataataccgatgcaacatttattattttttgt-actattatacccttatttattgaatttcatccaacttaaatacttcacta 15058153  T
Q  266 actacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaacacaattaatcatttccttaataattgtgcacaaatcttaaacg 365  Q
    |||||||||||||| ||  ||||||||||||  ||||||||||||||| |||| |||  |||||||||||| ||||||||| ||||||||| ||||||||    
T  15058154 actacaattaataagggtattttagtaaatgccactaattttaccattgaaattaacttaattaatcattttcttaataatcgtgcacaaaccttaaacg 15058253  T
Q  366 actaatattg 375  Q
    ||||||||||    
T  15058254 actaatattg 15058263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 163 - 391
Target Start/End: Original strand, 23142602 - 23142829
Alignment:
Q  163 ctcaaaataattgtcactttacaataccaatgcaatatttattannnnnnnccactattatactcttatttattgaatttcatcaaacttaactactcca 262  Q
    |||||||||||||||||||||||||| |||||||| ||||||         ||| |||||||| ||| |||||||||||||||| | |||||||||||||    
T  23142602 ctcaaaataattgtcactttacaatatcaatgcaacatttatcgttttttcccattattatac-cttctttattgaatttcatctagcttaactactcca 23142700  T
Q  263 ctaactacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaacacaattaatcatttccttaataattgtgcacaaatcttaa 362  Q
    ||| ||||||||||||| || |||||||||||||  |||| |||||||||| |||||||||||||||||||||| ||||||||| ||| | ||| |||||    
T  23142701 ctacctacaattaataagggtgttttagtaaatgccactatttttaccattgaaatcaacacaattaatcattttcttaataatcgtggataaaccttaa 23142800  T
Q  363 acgactaatattgtttgacggaggtagta 391  Q
    |  |||||||||||  |||||||| ||||    
T  23142801 ataactaatattgtgagacggagggagta 23142829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 218 - 356
Target Start/End: Original strand, 13909413 - 13909551
Alignment:
Q  218 tattatactcttatttattgaatttcatcaaacttaactactccactaactacaattaataatggagttttagtaaatgttactaattttaccattaaaa 317  Q
    ||||||||||||||||||| ||||||||| ||||||| |||||||||||||||||||||||| ||  ||||||||||||| ||||||||||||||| |||    
T  13909413 tattatactcttatttattcaatttcatctaacttaattactccactaactacaattaataagggtattttagtaaatgtcactaattttaccattgaaa 13909512  T
Q  318 tcaacacaattaatcatttccttaataattgtgcacaaa 356  Q
    |||||||| |||||||||||||||||||| |||||||||    
T  13909513 tcaacacatttaatcatttccttaataatcgtgcacaaa 13909551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 163 - 374
Target Start/End: Original strand, 6801864 - 6802076
Alignment:
Q  163 ctcaaaataattgtcactttacaataccaatgcaatatttattannnnnnn-ccactattatactcttatttattgaatttcatcaaacttaactactcc 261  Q
    ||||||||||||||||||||| |||| |||||||| ||||||||        ||| ||| |||| ||||||||| ||| |||||| ||||||||||||||    
T  6801864 ctcaaaataattgtcactttataatatcaatgcaacatttattattttttttccattataatacccttatttatcgaacttcatccaacttaactactcc 6801963  T
Q  262 actaactacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaacacaattaatcatttccttaataattgtgcacaaatctta 361  Q
    |||||||||||||||||| || ||||||||||||| || |||||||||||| |||||||||| |||||||||||| ||||||||   ||||  |||||||    
T  6801964 actaactacaattaataagggcgttttagtaaatgatattaattttaccatcaaaatcaacataattaatcattttcttaataaccatgcatcaatctta 6802063  T
Q  362 aacgactaatatt 374  Q
    |||||||| ||||    
T  6802064 aacgactattatt 6802076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 163 - 374
Target Start/End: Original strand, 21010105 - 21010322
Alignment:
Q  163 ctcaaaataattgtcactttacaataccaatgcaatatttattannnnnnn--ccactattatactcttatttattgaatttcatcaaacttaactactc 260  Q
    ||||||||||||||||||||| ||||||||||||  |||||| |         ||| ||||||||| ||||||||||||||||||| |||||||||||||    
T  21010105 ctcaaaataattgtcactttataataccaatgcagcatttataatttttttttccattattatactgttatttattgaatttcatccaacttaactactc 21010204  T
Q  261 cactaa----ctacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaacacaattaatcatttccttaataattgtgcacaaa 356  Q
    ||||||    |||||||| |||| || ||||||||||||| |||||||||| |||| ||||| ||||||||||||||||| ||||||||||||||| |||    
T  21010205 cactaattaactacaatttataagggtgttttagtaaatgatactaatttttccatcaaaattaacacaattaatcattttcttaataattgtgcataaa 21010304  T
Q  357 tcttaaacgactaatatt 374  Q
     ||||||| |||| ||||    
T  21010305 ccttaaacaactattatt 21010322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 220 - 374
Target Start/End: Complemental strand, 3291891 - 3291737
Alignment:
Q  220 ttatactcttatttattgaatttcatcaaacttaactactccactaactacaattaataatggagttttagtaaatgttactaattttaccattaaaatc 319  Q
    |||||| |||||||||||||||| ||| |||||||||||| ||||||||||||||||||| ||  |||||||||||  ||||||| ||||||||||||||    
T  3291891 ttatacacttatttattgaattttatccaacttaactacttcactaactacaattaataaaggtattttagtaaataatactaatattaccattaaaatc 3291792  T
Q  320 aacacaattaatcatttccttaataattgtgcacaaatcttaaacgactaatatt 374  Q
     | |||||||||||||||||||||||| ||||| ||| |||||||||||| ||||    
T  3291791 gatacaattaatcatttccttaataatcgtgcaaaaaccttaaacgactattatt 3291737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 163 - 374
Target Start/End: Complemental strand, 32440827 - 32440614
Alignment:
Q  163 ctcaaaataattgtcactttacaa--taccaatgcaatatttattannnnnnnccactattatactcttatttattgaatttcatcaaacttaactactc 260  Q
    ||||||||||||||||||||| ||  || |||||||  ||||||||       ||| |||| |||  |||||||||  |||||||| |||||||||||||    
T  32440827 ctcaaaataattgtcactttagaaaatatcaatgcagcatttattattattttccattattgtacctttatttattacatttcatccaacttaactactc 32440728  T
Q  261 cactaactacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaacacaattaatcatttccttaataattgtgcacaaatctt 360  Q
     ||||| |||||||||||| || ||||||||||||  ||||||||||||||| |||||||||||||||||||||||||| |||||  ||||| |||||||    
T  32440727 tactaattacaattaataagggtgttttagtaaataatactaattttaccatcaaaatcaacacaattaatcatttcctaaataaccgtgcataaatctt 32440628  T
Q  361 aaacgactaatatt 374  Q
    ||||||||| ||||    
T  32440627 aaacgactattatt 32440614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 163 - 376
Target Start/End: Original strand, 1781739 - 1781949
Alignment:
Q  163 ctcaaaataattgtcactttacaataccaatgcaatatttattannnnnnnccactattatactcttatttattgaatttcatcaaacttaactactcca 262  Q
    |||||||||||||||||||||||||| || ||||| |||| ||        |||||||||||| ||| |||||||||||||||  |||||||| ||||||    
T  1781739 ctcaaaataattgtcactttacaatatcattgcaacatttttt-tttcttcccactattatac-cttttttattgaatttcattcaacttaac-actcca 1781835  T
Q  263 ctaactacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaacacaattaatcatttccttaataattgtgcacaaatcttaa 362  Q
    ||||||||||||||||| || ||||||||||||| |||||||||||||||| | ||||||| |||||||||||| ||||| ||| ||||| ||| |||||    
T  1781836 ctaactacaattaataagggtgttttagtaaatgctactaattttaccattgagatcaacataattaatcattttcttaacaatcgtgcataaaccttaa 1781935  T
Q  363 acgactaatattgt 376  Q
    |||| | |||||||    
T  1781936 acgagtgatattgt 1781949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 214 - 342
Target Start/End: Complemental strand, 24983578 - 24983450
Alignment:
Q  214 ccactattatactcttatttattgaatttcatcaaacttaactactccactaactacaattaataatggagttttagtaaatgttactaattttaccatt 313  Q
    |||||| ||||| |||||||||||||||||| | |||||||||||||||||||||||||||||||| || |||||||||||||  |||||||||||||||    
T  24983578 ccactaatatacccttatttattgaatttcacccaacttaactactccactaactacaattaataagggtgttttagtaaatgacactaattttaccatt 24983479  T
Q  314 aaaatcaacacaattaatcatttccttaa 342  Q
     |||||||| ||| |||||||||||||||    
T  24983478 gaaatcaactcaactaatcatttccttaa 24983450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 163 - 345
Target Start/End: Original strand, 5302285 - 5302467
Alignment:
Q  163 ctcaaaataattgtcactttacaataccaatgcaatatttattannnnnnnccactattatactcttatttattgaatttcatcaaacttaactactcca 262  Q
    ||||||||||||||||||||| ||||| ||||||  ||||||||       ||| ||| |||| | ||||||||||| |||||| |||||||||||||||    
T  5302285 ctcaaaataattgtcactttagaatactaatgcagcatttattatttttttccattataatacccgtatttattgaacttcatccaacttaactactcca 5302384  T
Q  263 ctaactacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaacacaattaatcatttccttaataa 345  Q
     |||||||||||||||| |  ||||| ||||||  || |||||||||||| |||||||||||| |||||||||| ||||||||    
T  5302385 ttaactacaattaataaggatgttttggtaaattatattaattttaccatcaaaatcaacacatttaatcattttcttaataa 5302467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 218 - 346
Target Start/End: Original strand, 13087519 - 13087647
Alignment:
Q  218 tattatactcttatttattgaatttcatcaaacttaactactccactaactacaattaataatggagttttagtaaatgttactaattttaccattaaaa 317  Q
    ||||||| ||||||||||||||||||||| ||||||| |||| ||||||||| ||||||||| |  ||||||||||||| || ||||||||||||| |||    
T  13087519 tattatattcttatttattgaatttcatccaacttaattacttcactaactataattaataaggatgttttagtaaatgatattaattttaccattgaaa 13087618  T
Q  318 tcaacacaattaatcatttccttaataat 346  Q
    |||||||||||||||| || |||||||||    
T  13087619 tcaacacaattaatcactttcttaataat 13087647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 163 - 365
Target Start/End: Original strand, 7920175 - 7920374
Alignment:
Q  163 ctcaaaataattgtcactttacaataccaatgcaatatttattannnnnnnccactattatactcttatttattgaatttcatcaaacttaactactcca 262  Q
    |||||||||||| |||||||| |||| |||||||| |||||||         |||||||||||  ||||||||||||||||||  || |||| |||| ||    
T  7920175 ctcaaaataattatcactttagaatatcaatgcaacatttatttattttt--cactattataccattatttattgaatttcattcaaattaaatacttca 7920272  T
Q  263 ctaactacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaacacaattaatcatttccttaataattgtgcacaaatcttaa 362  Q
    |||||||||||||||||   | |||||||||||| |  ||||||||||||| ||||||||| ||||||||||||| |||| ||| |||||||||||||||    
T  7920273 ctaactacaattaataagata-ttttagtaaatggttttaattttaccattgaaatcaacaaaattaatcatttctttaaaaatcgtgcacaaatcttaa 7920371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 268 - 366
Target Start/End: Complemental strand, 27448231 - 27448133
Alignment:
Q  268 tacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaacacaattaatcatttccttaataattgtgcacaaatcttaaacga 366  Q
    ||||||||||||||  ||||||||||||| ||||||||| | ||| ||||||||||||||||||||||||||||||||||||||| ||| |||||||||    
T  27448231 tacaattaataatgatgttttagtaaatgatactaatttcatcatcaaaatcaacacaattaatcatttccttaataattgtgcaaaaaccttaaacga 27448133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 219 - 374
Target Start/End: Complemental strand, 1063727 - 1063572
Alignment:
Q  219 attatactcttatttattgaatttcatcaaacttaactactccactaactacaattaataatggagttttagtaaatgttactaattttaccattaaaat 318  Q
    ||||||| |||| ||||| ||||||||  |||||||||||||||||||||||||||| | |  |  |||||||||||  ||||||||||| |||| ||||    
T  1063727 attatacccttacttattaaatttcatttaacttaactactccactaactacaattactcagagtattttagtaaataatactaattttatcattgaaat 1063628  T
Q  319 caacacaattaatcatttccttaataattgtgcacaaatcttaaacgactaatatt 374  Q
    |||||||||||||||||| ||||| |||| | || |||  ||||||||||| ||||    
T  1063627 caacacaattaatcattttcttaaaaattatacataaactttaaacgactactatt 1063572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 166 - 374
Target Start/End: Original strand, 15582222 - 15582428
Alignment:
Q  166 aaaataattgtcactttacaataccaatgcaatatttattannnnnnnccactattatactcttatttattgaatttcatcaaacttaactactccacta 265  Q
    ||||||||||||| |||| |||| |||||||||| ||||||        |||||| |||  ||||||||||||||||||| ||||||||| ||| |||||    
T  15582222 aaaataattgtcattttagaatatcaatgcaataattattatttttt--cactatcatatccttatttattgaatttcattaaacttaaccacttcacta 15582319  T
Q  266 actacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaacacaattaatcatttccttaataattgtgcacaaatcttaaacg 365  Q
    |||||||  | |||  |  ||||| |||||| |||| ||||||||||| |||||||||||||||||||||   ||||  |||||  ||||||||||||||    
T  15582320 actacaacaagtaaatgtattttaataaatgatactgattttaccattgaaatcaacacaattaatcattcatttaaatattgtctacaaatcttaaacg 15582419  T
Q  366 actaatatt 374  Q
    |||| ||||    
T  15582420 actattatt 15582428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 172 - 374
Target Start/End: Complemental strand, 1956150 - 1955948
Alignment:
Q  172 attgtcactttacaataccaatgcaatatttattannnnnnnc-cactattatactcttatttattgaatttcatcaaacttaactactccactaactac 270  Q
    |||||||||||| |||| |||||||| ||||||||       | || |||||||| |||||||||||||||| ||| |||  | ||||| ||||||||||    
T  1956150 attgtcactttataataacaatgcaacatttattatttttttctcattattatac-cttatttattgaattttatcgaacacagctacttcactaactac 1956052  T
Q  271 aattaataatggagttttagtaaatgttactaattttaccattaaaatcaacacaattaatcatttccttaataattgtgcacaaatcttaaacgactaa 370  Q
    |||||||||  |  | |||||||||| |||||||||||||||| ||||||| |||||||||| ||| |||||| | |||| | ||| ||||||||||||     
T  1956051 aattaataagagtatattagtaaatgatactaattttaccattgaaatcaatacaattaatctttttcttaattactgtgtataaaccttaaacgactat 1955952  T
Q  371 tatt 374  Q
    ||||    
T  1955951 tatt 1955948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 163 - 332
Target Start/End: Complemental strand, 11143766 - 11143597
Alignment:
Q  163 ctcaaaataattgtcactttacaataccaatgcaatatttattannnnnnnccactattatactcttatttattgaatttcatcaaacttaactactcca 262  Q
    ||||||| ||||||||||||| | ||||||||||  ||||||||       | | ||| |||| ||||||||||||| |||||| |||||||||||| ||    
T  11143766 ctcaaaaaaattgtcactttagactaccaatgcagcatttattatttttttc-attataatacccttatttattgaacttcatccaacttaactacttca 11143668  T
Q  263 ctaactacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaaca-caattaatc 332  Q
    ||||||| ||||||||| || | ||||||||||| ||||||||||| ||| |||||||||| |||||||||    
T  11143667 ctaactataattaataagggtgatttagtaaatgatactaattttatcatcaaaatcaacatcaattaatc 11143597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 163 - 279
Target Start/End: Complemental strand, 34657745 - 34657626
Alignment:
Q  163 ctcaaaataattgtcactttacaataccaatgcaatatttattannnnnnn---ccactattatactcttatttattgaatttcatcaaacttaactact 259  Q
    |||||||||||||||||||||||||||| |||||  ||||||||          ||||||||||||  ||||||||||||||||||| ||||||||||||    
T  34657745 ctcaaaataattgtcactttacaatacctatgcagaatttattatattttttttccactattatacatttatttattgaatttcatccaacttaactact 34657646  T
Q  260 ccactaactacaattaataa 279  Q
    ||||||||||||||||||||    
T  34657645 ccactaactacaattaataa 34657626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 218 - 365
Target Start/End: Original strand, 1225037 - 1225183
Alignment:
Q  218 tattatactcttatttattgaatttcatcaaacttaactactccactaactacaattaataatggagttttagtaaatgttactaattttaccattaaaa 317  Q
    |||||||| |||||||||| ||||| ||| ||||||||| || ||||||||| |||||||||     |||||||||||  || ||||||||| ||| |||    
T  1225037 tattatacccttatttattcaattt-atccaacttaacttcttcactaactaaaattaataagaatattttagtaaataatattaattttactatttaaa 1225135  T
Q  318 tcaacacaattaatcatttccttaataattgtgcacaaatcttaaacg 365  Q
    |||||||||||||||||||| |||| | | |||||||| |||||||||    
T  1225136 tcaacacaattaatcatttctttaaaactcgtgcacaactcttaaacg 1225183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 221 - 342
Target Start/End: Original strand, 17828932 - 17829053
Alignment:
Q  221 tatactcttatttattgaatttcatcaaacttaactactccactaactacaattaataatggagttttagtaaatgttactaattttaccattaaaatca 320  Q
    |||||||||||| ||| ||||||||| ||||||| |||| ||||||||||||||||||| |   |||||||||||| || |||||||||  || |||| |    
T  17828932 tatactcttattaattaaatttcatccaacttaattacttcactaactacaattaataaagatattttagtaaatgatattaattttactgttgaaatta 17829031  T
Q  321 acacaattaatcatttccttaa 342  Q
    |||| |||||| ||||||||||    
T  17829032 acactattaataatttccttaa 17829053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 228 - 352
Target Start/End: Complemental strand, 6834484 - 6834360
Alignment:
Q  228 ttatttattgaatttcatcaaacttaactactccactaactacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaacacaat 327  Q
    ||||||||||||| ||||  || ||| ||| || |||||||| ||||||||| || ||||||||||||| || |||||| || || ||||||||||||||    
T  6834484 ttatttattgaatctcattcaatttatctattctactaactataattaataaaggtgttttagtaaatgatattaatttgactatcaaaatcaacacaat 6834385  T
Q  328 taatcatttccttaataattgtgca 352  Q
    |||| |||| ||||||||| |||||    
T  6834384 taattattttcttaataatcgtgca 6834360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 166 - 326
Target Start/End: Original strand, 34299931 - 34300092
Alignment:
Q  166 aaaataattgtcactttacaataccaatgcaatatttattannnnnnn-ccactattatactcttatttattgaatttcatcaaacttaactactccact 264  Q
    |||||||||||||||||| |||| |||| ||| ||||||||        |||||| ||||  ||||||||||||||  |||| |||||||||||| ||||    
T  34299931 aaaataattgtcactttagaatatcaatacaacatttattattttctttccactaatatatccttatttattgaataccatccaacttaactacttcact 34300030  T
Q  265 aactacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaacacaa 326  Q
    ||| ||||||||||| |   |||||||||||  ||||||||||| |||| ||||||| ||||    
T  34300031 aaccacaattaataaggatattttagtaaataatactaattttatcattcaaatcaaaacaa 34300092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 289 - 368
Target Start/End: Original strand, 7072220 - 7072299
Alignment:
Q  289 agtaaatgttactaattttaccattaaaatcaacacaattaatcatttccttaataattgtgcacaaatcttaaacgact 368  Q
    ||||||||  ||||||||||||||||||||||||||||||||| |||| ||||| |||| | |||||| |||||||||||    
T  7072220 agtaaatgacactaattttaccattaaaatcaacacaattaattattttcttaaaaattatacacaaaccttaaacgact 7072299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 216 - 277
Target Start/End: Original strand, 15046111 - 15046171
Alignment:
Q  216 actattatactcttatttattgaatttcatcaaacttaactactccactaactacaattaat 277  Q
    |||||||||| |||||||||||||||||||| ||| ||||||||||||||||||||||||||    
T  15046111 actattatacccttatttattgaatttcatccaac-taactactccactaactacaattaat 15046171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 227 - 356
Target Start/End: Complemental strand, 21804644 - 21804516
Alignment:
Q  227 cttatttattgaatttcatcaaacttaactactccactaactacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaacacaa 326  Q
    |||| ||||| |||||| || ||||||| |  |||||||||||||||||||||   | ||| |||||||| |||||||||||| ||| |||| || ||||    
T  21804644 cttagttattaaatttcttccaacttaatttttccactaactacaattaataagata-tttaagtaaatgatactaattttacaattgaaattaatacaa 21804546  T
Q  327 ttaatcatttccttaataattgtgcacaaa 356  Q
    ||||||||||| |||| |||| ||||||||    
T  21804545 ttaatcatttctttaaaaattatgcacaaa 21804516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 228 - 336
Target Start/End: Original strand, 22398412 - 22398519
Alignment:
Q  228 ttatttattgaatttcatcaaacttaactactccactaactacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaacacaat 327  Q
    ||||||||||||||||||| |||||||||||| || ||||||||||||||||  | |  ||| | |||| |  |||||||| |||||||||| |||||||    
T  22398412 ttatttattgaatttcatctaacttaactacttcaataactacaattaataagagtgacttaatgaatg-tgttaattttatcattaaaatctacacaat 22398510  T
Q  328 taatcattt 336  Q
    |||||||||    
T  22398511 taatcattt 22398519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 284 - 356
Target Start/End: Complemental strand, 27367495 - 27367423
Alignment:
Q  284 gttttagtaaatgttactaattttaccattaaaatcaacacaattaatcatttccttaataattgtgcacaaa 356  Q
    |||||||||||||  | ||||||||| | ||||||||||||||||||||||||| |||||||| |||||||||    
T  27367495 gttttagtaaatgcaattaattttacaactaaaatcaacacaattaatcatttctttaataatcgtgcacaaa 27367423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 284 - 356
Target Start/End: Complemental strand, 27457842 - 27457770
Alignment:
Q  284 gttttagtaaatgttactaattttaccattaaaatcaacacaattaatcatttccttaataattgtgcacaaa 356  Q
    |||||||||||||  | ||||||||| | ||||||||||||||||||||||||| |||||||| |||||||||    
T  27457842 gttttagtaaatgcaattaattttacaactaaaatcaacacaattaatcatttctttaataatcgtgcacaaa 27457770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 216 - 313
Target Start/End: Complemental strand, 10923505 - 10923408
Alignment:
Q  216 actattatactcttatttattgaatttcatcaaacttaactactccactaactacaattaataatggagttttagtaaatgttactaattttaccatt 313  Q
    ||||||||| ||||||||||||||||||||| || |||| || ||||||| |||||||||| || ||  |||||||||||  || |||||||| ||||    
T  10923505 actattatattcttatttattgaatttcatctaatttaattattccactagctacaattaacaacggtattttagtaaataatattaattttatcatt 10923408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 164 - 265
Target Start/End: Complemental strand, 21425738 - 21425635
Alignment:
Q  164 tcaaaataattgtcactttacaataccaatgcaatatttattannnnnnn--ccactattatactcttatttattgaatttcatcaaacttaactactcc 261  Q
    ||||||||||||| ||||||||||| |||||||| ||||||||         |||| ||||||  |||||||||||||||||||| |||||||||||| |    
T  21425738 tcaaaataattgttactttacaatatcaatgcaacatttattattattttttccaccattatatccttatttattgaatttcatccaacttaactacttc 21425639  T
Q  262 acta 265  Q
    ||||    
T  21425638 acta 21425635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 298 - 376
Target Start/End: Complemental strand, 34639497 - 34639419
Alignment:
Q  298 tactaattttaccattaaaatcaacacaattaatcatttccttaataattgtgcacaaatcttaaacgactaatattgt 376  Q
    ||||||||| |||||| |||| |||||||||||| ||||||||| |||| ||| ||||| || |||||| |||||||||    
T  34639497 tactaatttcaccattgaaattaacacaattaattatttccttattaatcgtgtacaaacctcaaacgattaatattgt 34639419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 287 - 348
Target Start/End: Original strand, 26592380 - 26592441
Alignment:
Q  287 ttagtaaatgttactaattttaccattaaaatcaacacaattaatcatttccttaataattg 348  Q
    |||||||||| |||  ||||||||||||||||||| |  |||||||||||||||||||||||    
T  26592380 ttagtaaatgatacacattttaccattaaaatcaatattattaatcatttccttaataattg 26592441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 227 - 279
Target Start/End: Complemental strand, 16205274 - 16205222
Alignment:
Q  227 cttatttattgaatttcatcaaacttaactactccactaactacaattaataa 279  Q
    |||||||||||| ||||||| ||||||| || |||||||||||||||||||||    
T  16205274 cttatttattgagtttcatctaacttaaatattccactaactacaattaataa 16205222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 236 - 336
Target Start/End: Original strand, 17835391 - 17835491
Alignment:
Q  236 tgaatttcatcaaacttaactactccactaactacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaacacaattaatcatt 335  Q
    ||||| ||||| ||||||||||||  || |||||||||||||||  |  ||||||||||||  | ||||||||  ||||||||||| ||||||||| |||    
T  17835391 tgaatatcatccaacttaactactaaacaaactacaattaataaatgtattttagtaaatgagattaattttattattaaaatcaatacaattaattatt 17835490  T
Q  336 t 336  Q
    |    
T  17835491 t 17835491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 164 - 336
Target Start/End: Complemental strand, 23397796 - 23397628
Alignment:
Q  164 tcaaaataattgtcactttacaataccaatgcaatatttattannnnnnncc-actattatactcttatttattgaatttcatcaaacttaactactcca 262  Q
    |||||||||||||||||||| |||| |||||||| ||||||||       |  | || | |||| |||||||||||||||| |     |||| |||||||    
T  23397796 tcaaaataattgtcactttagaatatcaatgcaacatttattatgttttccttagtaatttacttttatttattgaatttcgt-----ttaattactcca 23397702  T
Q  263 ctaactacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaacacaattaatcattt 336  Q
    ||||||||| ||||||   | ||||||||||||   ||||||||||||||| |||||||| ||| |||| ||||    
T  23397701 ctaactacacttaatagatgtgttttagtaaattacactaattttaccatttaaatcaactcaagtaataattt 23397628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 254 - 374
Target Start/End: Complemental strand, 28101448 - 28101328
Alignment:
Q  254 actactccactaactacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaacacaattaatcatttccttaataattgtgcac 353  Q
    |||||| |||||||||||||||  ||  || |||||||||||| ||||||||||| |||| ||||||||| ||| |||  ||  ||||| |||| || |     
T  28101448 actactacactaactacaattatcaaatgaattttagtaaatgatactaattttatcattgaaatcaacataataaatacttctcttaaaaattatgtat 28101349  T
Q  354 aaatcttaaacgactaatatt 374  Q
    |||| ||||||||||| ||||    
T  28101348 aaattttaaacgactattatt 28101328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 216 - 279
Target Start/End: Original strand, 7071997 - 7072060
Alignment:
Q  216 actattatactcttatttattgaatttcatcaaacttaactactccactaactacaattaataa 279  Q
    |||||||||| |||||||||||||||||||||||| |  ||||| ||||||||| ||| |||||    
T  7071997 actattatacacttatttattgaatttcatcaaacgttgctacttcactaactataatcaataa 7072060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 259 - 346
Target Start/End: Original strand, 21018789 - 21018876
Alignment:
Q  259 tccactaactacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaacacaattaatcatttccttaataat 346  Q
    |||| |||||| || ||||||||| ||||||||||||  |||  |||||| |||||||||||| |  | |||||||||||||||||||    
T  21018789 tccattaactataactaataatggtgttttagtaaataatacatattttatcattaaaatcaatagtagtaatcatttccttaataat 21018876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 163 - 206
Target Start/End: Complemental strand, 21478275 - 21478232
Alignment:
Q  163 ctcaaaataattgtcactttacaataccaatgcaatatttatta 206  Q
    ||||||||||||||||||||||||||||||| ||| ||||||||    
T  21478275 ctcaaaataattgtcactttacaataccaatacaacatttatta 21478232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 163 - 244
Target Start/End: Complemental strand, 27367607 - 27367524
Alignment:
Q  163 ctcaaaataattgtcactttacaataccaatgcaatatttatta--nnnnnnnccactattatactcttatttattgaatttca 244  Q
    |||| ||||||||||||||||||||||||||| || ||||||||         |||||||||||| ||||||||||||||||||    
T  27367607 ctcagaataattgtcactttacaataccaatgtaacatttattagttttttttccactattatacccttatttattgaatttca 27367524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 163 - 244
Target Start/End: Complemental strand, 27457954 - 27457871
Alignment:
Q  163 ctcaaaataattgtcactttacaataccaatgcaatatttatta--nnnnnnnccactattatactcttatttattgaatttca 244  Q
    |||| ||||||||||||||||||||||||||| || ||||||||         |||||||||||| ||||||||||||||||||    
T  27457954 ctcagaataattgtcactttacaataccaatgtaacatttattagttttttttccactattatacccttatttattgaatttca 27457871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 218 - 325
Target Start/End: Original strand, 33510129 - 33510234
Alignment:
Q  218 tattatactcttatttattgaatttcatcaaacttaactactccactaactacaattaataatggagttttagtaaatgttactaattttaccattaaaa 317  Q
    |||||||| |||||||| | ||||||||| ||||||||||||| | ||| ||||||||||||     |||||||||||  ||||||||||| || |||||    
T  33510129 tattatacccttatttaataaatttcatccaacttaactactcaattaattacaattaataaaaatattttagtaaat-atactaattttatca-taaaa 33510226  T
Q  318 tcaacaca 325  Q
    ||||||||    
T  33510227 tcaacaca 33510234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 218 - 279
Target Start/End: Complemental strand, 4367378 - 4367317
Alignment:
Q  218 tattatactcttatttattgaatttcatcaaacttaactactccactaactacaattaataa 279  Q
    |||||| | |||||||||| ||||||||  |||||||||||| ||||||||||| |||||||    
T  4367378 tattattcccttatttattaaatttcatgcaacttaactacttcactaactacagttaataa 4367317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 252 - 321
Target Start/End: Complemental strand, 12605554 - 12605485
Alignment:
Q  252 taactactccactaactacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaa 321  Q
    ||||||||| |||||||| ||||||||| || |||||| |||||| ||  |||||| |||||||||||||    
T  12605554 taactactctactaactaaaattaataaaggtgttttaataaatgatataaattttgccattaaaatcaa 12605485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 285 - 325
Target Start/End: Complemental strand, 4582039 - 4581999
Alignment:
Q  285 ttttagtaaatgttactaattttaccattaaaatcaacaca 325  Q
    |||||||||||| || |||||||||||||||||||||||||    
T  4582039 ttttagtaaatgatattaattttaccattaaaatcaacaca 4581999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 163 - 206
Target Start/End: Complemental strand, 27367279 - 27367236
Alignment:
Q  163 ctcaaaataattgtcactttacaataccaatgcaatatttatta 206  Q
    ||||||||||||||||||||| ||||||||||||  ||||||||    
T  27367279 ctcaaaataattgtcactttagaataccaatgcatcatttatta 27367236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 163 - 206
Target Start/End: Complemental strand, 27457626 - 27457583
Alignment:
Q  163 ctcaaaataattgtcactttacaataccaatgcaatatttatta 206  Q
    ||||||||||||||||||||| ||||||||||||  ||||||||    
T  27457626 ctcaaaataattgtcactttagaataccaatgcatcatttatta 27457583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 13 - 80
Target Start/End: Complemental strand, 30539192 - 30539125
Alignment:
Q  13 aaggcaaactaaaggccgcaattaagacgactaggggcgggccacaataaaagtggaagttccaacag 80  Q
    ||||||||| |||||| |||||| || ||||||||||||| || ||||||| | |||| |||||||||    
T  30539192 aaggcaaaccaaaggctgcaatttaggcgactaggggcggaccgcaataaaggcggaatttccaacag 30539125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 284 - 346
Target Start/End: Original strand, 2423673 - 2423735
Alignment:
Q  284 gttttagtaaatgttactaattttaccattaaaatcaacacaattaatcatttccttaataat 346  Q
    |||||| |||||| |||  |||||||||||||||||||||  ||||||||||| || ||||||    
T  2423673 gttttaataaatgatacatattttaccattaaaatcaacaatattaatcattttctgaataat 2423735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 301 - 367
Target Start/End: Complemental strand, 7764281 - 7764215
Alignment:
Q  301 taattttaccattaaaatcaacacaattaatcatttccttaataattgtgcacaaatcttaaacgac 367  Q
    ||||||||||||||||||||||| ||||||| ||||| |||| |||   |||| | |||||||||||    
T  7764281 taattttaccattaaaatcaacataattaataatttcattaaaaatcacgcaccattcttaaacgac 7764215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 214 - 308
Target Start/End: Original strand, 8695030 - 8695124
Alignment:
Q  214 ccactattatactcttatttattgaatttcatcaaacttaactactccactaactacaattaataatggagttttagtaaatgttactaatttta 308  Q
    |||||| |||| |||||||||| ||||||||    | ||||| ||| |||||||||||||||||||    ||||||||||||| || ||||||||    
T  8695030 ccactagtatattcttatttatagaatttcacttcatttaaccacttcactaactacaattaataagaatgttttagtaaatgctattaatttta 8695124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 13 - 79
Target Start/End: Original strand, 12134630 - 12134696
Alignment:
Q  13 aaggcaaactaaaggccgcaattaagacgactaggggcgggccacaataaaagtggaagttccaaca 79  Q
    ||||||||| ||||||||||||| ||  |||||||||||| ||| |||||| | |||| ||||||||    
T  12134630 aaggcaaaccaaaggccgcaatttaggtgactaggggcggaccagaataaaggcggaatttccaaca 12134696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 221 - 279
Target Start/End: Complemental strand, 13206954 - 13206896
Alignment:
Q  221 tatactcttatttattgaatttcatcaaacttaactactccactaactacaattaataa 279  Q
    ||||| ||||||||||||||| ||   || ||||| |||||||||||||||||||||||    
T  13206954 tatacccttatttattgaattacactcaatttaacaactccactaactacaattaataa 13206896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 222 - 295
Target Start/End: Complemental strand, 21425470 - 21425397
Alignment:
Q  222 atactcttatttattgaatttca-tcaaacttaactactccactaactacaattaataatggagttttagtaaat 295  Q
    |||||||||||||||| |||||| |||   |||| |||||||||||||| |||||||||| | ||||||||||||    
T  21425470 atactcttatttattgcatttcaatcatttttaagtactccactaactataattaataat-gtgttttagtaaat 21425397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 164 - 259
Target Start/End: Complemental strand, 28106105 - 28106013
Alignment:
Q  164 tcaaaataattgtcactttacaataccaatgcaatatttattannnnnnnccactattatactcttatttattgaatttcatcaaacttaactact 259  Q
    ||||||||||||||||||||||||| ||||||||  |||| |        |||||||||||   ||||||||||||||||||  ||||||||||||    
T  28106105 tcaaaataattgtcactttacaataacaatgcaagttttaat---tttttccactattatatcattatttattgaatttcattcaacttaactact 28106013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 252 - 313
Target Start/End: Complemental strand, 8115129 - 8115068
Alignment:
Q  252 taactactccactaactacaattaataatggagttttagtaaatgttactaattttaccatt 313  Q
    |||||| ||||||||||| |||||||||  |  |||||||||||| ||||||||||| ||||    
T  8115129 taactaatccactaactaaaattaataagagtattttagtaaatgatactaattttatcatt 8115068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #63
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 13 - 77
Target Start/End: Original strand, 22911321 - 22911385
Alignment:
Q  13 aaggcaaactaaaggccgcaattaagacgactaggggcgggccacaataaaagtggaagttccaa 77  Q
    ||||||||| ||||| ||||||| || ||||||||||||| ||  |||||| |||||| ||||||    
T  22911321 aaggcaaaccaaaggtcgcaatttaggcgactaggggcggaccgtaataaaggtggaatttccaa 22911385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0159 (Bit Score: 115; Significance: 3e-58; HSPs: 1)
Name: scaffold0159
Description:

Target: scaffold0159; HSP #1
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 163 - 391
Target Start/End: Complemental strand, 34199 - 33972
Alignment:
Q  163 ctcaaaataattgtcactttacaataccaatgcaatatttattannnnnnnccactattatactcttatttattgaatttcatcaaacttaactactcca 262  Q
    |||||||||||||||||||||||||| |||||||  ||||||||       ||||||||||||  ||||||||||||||||||| |||||||||| | ||    
T  34199 ctcaaaataattgtcactttacaatatcaatgcatcatttattatttttt-ccactattataccattatttattgaatttcatccaacttaactatttca 34101  T
Q  263 ctaactacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaacacaattaatcatttccttaataattgtgcacaaatcttaa 362  Q
    ||||||||||||||||| || |||||||||||||  ||||||||||| ||| || |||| |||||||||||||||||||||||| ||||||||| |||||    
T  34100 ctaactacaattaataagggtgttttagtaaatgccactaattttactattgaattcaatacaattaatcatttccttaataatcgtgcacaaaccttaa 34001  T
Q  363 acgactaatattgtttgacggaggtagta 391  Q
    | ||||||||||||  |||||||| ||||    
T  34000 atgactaatattgtgagacggaggaagta 33972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0095 (Bit Score: 100; Significance: 3e-49; HSPs: 3)
Name: scaffold0095
Description:

Target: scaffold0095; HSP #1
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 164 - 376
Target Start/End: Original strand, 50139 - 50351
Alignment:
Q  164 tcaaaataattgtcactttacaataccaatgcaatatttattannnnnnnccactattatactcttatttattgaatttcatcaaacttaactactccac 263  Q
    |||||||||||||||||||| |||| |||||||  ||||||||        ||||||||||| |||||||||| ||||||||  ||||||| ||||||||    
T  50139 tcaaaataattgtcactttagaatatcaatgcagcatttattattatttttcactattatacccttatttatttaatttcattcaacttaattactccac 50238  T
Q  264 taactacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaacacaattaatcatttccttaataattgtgcacaaatcttaaa 363  Q
    |||||  ||||||||| |   || ||||||||| ||||||||||| |||| |||| ||||||||||||||||||||||||||| ||||||||| ||||||    
T  50239 taactgtaattaataaagatattatagtaaatgatactaattttatcattgaaattaacacaattaatcatttccttaataatcgtgcacaaaccttaaa 50338  T
Q  364 cgactaatattgt 376  Q
    |||||||||||||    
T  50339 cgactaatattgt 50351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0095; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 163 - 318
Target Start/End: Original strand, 22282 - 22437
Alignment:
Q  163 ctcaaaataattgtcactttacaataccaatgcaatatttattannnnnnnccactattatactcttatttattgaatttcatcaaactt-aactactcc 261  Q
    |||||||||||| ||||||||||||||| || ||| ||||||||       | |||||||||  |||||||||||||||| ||| || || ||||||| |    
T  22282 ctcaaaataattatcactttacaataccgatacaacatttattatttttttc-actattatatccttatttattgaattttatccaattttaactactgc 22380  T
Q  262 actaactacaattaataatggagttttagtaaatgttactaattttaccattaaaat 318  Q
    |||||| || |||||||| |   |||||||||||| ||||||||||| |||||||||    
T  22381 actaaccacgattaataaagatattttagtaaatgatactaattttagcattaaaat 22437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0095; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 313 - 352
Target Start/End: Original strand, 22660 - 22699
Alignment:
Q  313 taaaatcaacacaattaatcatttccttaataattgtgca 352  Q
    |||||||||||||||||||||||| |||||||| ||||||    
T  22660 taaaatcaacacaattaatcattttcttaataagtgtgca 22699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 100; Significance: 3e-49; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 216 - 391
Target Start/End: Complemental strand, 136165 - 135990
Alignment:
Q  216 actattatactcttatttattgaatttcatcaaacttaactactccactaactacaattaataatggagttttagtaaatgttactaattttaccattaa 315  Q
    ||||||||||  ||||||||| |||||||||||||||||||||| ||||||||| ||||||||| || ||||||||||||| || ||||||||||||| |    
T  136165 actattataccattatttatttaatttcatcaaacttaactacttcactaactataattaataagggtgttttagtaaatgctattaattttaccattga 136066  T
Q  316 aatcaacacaattaatcatttccttaataattgtgcacaaatcttaaacgactaatattgtttgacggaggtagta 391  Q
    ||||||||  |||||||||||  |||||||| ||||| |||||||||||||||||||||||  |||||||| ||||    
T  136065 aatcaacattattaatcatttatttaataatcgtgcataaatcttaaacgactaatattgtgagacggagggagta 135990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0302 (Bit Score: 96; Significance: 6e-47; HSPs: 1)
Name: scaffold0302
Description:

Target: scaffold0302; HSP #1
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 227 - 386
Target Start/End: Original strand, 16096 - 16255
Alignment:
Q  227 cttatttattgaatttcatcaaacttaactactccactaactacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaacacaa 326  Q
    |||||||||||||||||||| | ||||||| || || ||||||||||||||||  | ||||||||||||| || |||||||| |||||||||||||||||    
T  16096 cttatttattgaatttcatccatcttaactgcttcattaactacaattaataagtgtgttttagtaaatgctattaattttatcattaaaatcaacacaa 16195  T
Q  327 ttaatcatttccttaataattgtgcacaaatcttaaacgactaatattgtttgacggagg 386  Q
    |||||||||||||||||||| ||| ||||||||||||| |||||||||||  ||||||||    
T  16196 ttaatcatttccttaataatcgtgaacaaatcttaaactactaatattgtgagacggagg 16255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 89; Significance: 9e-43; HSPs: 2)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 218 - 374
Target Start/End: Original strand, 1693 - 1849
Alignment:
Q  218 tattatactcttatttattgaatttcatcaaacttaactactccactaactacaattaataatggagttttagtaaatgttactaattttaccattaaaa 317  Q
    |||||||| |||||||||||||||| ||| ||||||||||||||||| |||||||||||||  || |||| |||||||| ||||||||||||||| ||||    
T  1693 tattatacccttatttattgaatttaatccaacttaactactccactgactacaattaatacgggtgtttaagtaaatgatactaattttaccatcaaaa 1792  T
Q  318 tcaacacaattaatcatttccttaataattgtgcacaaatcttaaacgactaatatt 374  Q
    |||||| |||||||||||| ||||||||  ||| | |||||||||||||||| ||||    
T  1793 tcaacataattaatcattttcttaataaccgtgtataaatcttaaacgactattatt 1849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 166 - 206
Target Start/End: Original strand, 1493 - 1533
Alignment:
Q  166 aaaataattgtcactttacaataccaatgcaatatttatta 206  Q
    |||||||||||||||||| |||||| |||||| ||||||||    
T  1493 aaaataattgtcactttagaataccgatgcaacatttatta 1533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0294 (Bit Score: 88; Significance: 4e-42; HSPs: 1)
Name: scaffold0294
Description:

Target: scaffold0294; HSP #1
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 214 - 377
Target Start/End: Original strand, 17020 - 17183
Alignment:
Q  214 ccactattatactcttatttattgaatttcatcaaacttaactactccactaactacaattaataatggagttttagtaaatgttactaattttaccatt 313  Q
    ||||||||||| | ||||||||||||||||||  ||| ||| ||| ||| |||||| ||||||||| || ||| || |||||| ||||||||||||||||    
T  17020 ccactattataattttatttattgaatttcattcaacgtaattacgccattaactataattaataagggtgttctaataaatgctactaattttaccatt 17119  T
Q  314 aaaatcaacacaattaatcatttccttaataattgtgcacaaatcttaaacgactaatattgtt 377  Q
     |||||||||||||||||||||| |||||||||  |||||||| ||||||||||||||||||||    
T  17120 gaaatcaacacaattaatcattttcttaataatcatgcacaaaccttaaacgactaatattgtt 17183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328 (Bit Score: 84; Significance: 9e-40; HSPs: 1)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 163 - 374
Target Start/End: Complemental strand, 8163 - 7951
Alignment:
Q  163 ctcaaaataattgtcactttacaataccaatgcaatatttattannnnnnncc-actattatactcttatttattgaatttcatcaaacttaactactcc 261  Q
    ||||||||||||||||||||| ||||||||||||  ||||||||       || | ||| |||| ||||||||||||| |||||| ||||||| ||||||    
T  8163 ctcaaaataattgtcactttagaataccaatgcagcatttattatttttttcccattataatacccttatttattgaacttcatccaacttaattactcc 8064  T
Q  262 actaactacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaacacaattaatcatttccttaataattgtgcacaaatctta 361  Q
    |||||||||||||||||| || ||||| ||||||  || ||||||||||||  ||||||||| |||||||||||||||||||||  |||||  || | ||    
T  8063 actaactacaattaataagggtgttttggtaaataatattaattttaccatccaaatcaacaaaattaatcatttccttaataaccgtgcatcaaccgta 7964  T
Q  362 aacgactaatatt 374  Q
    |||||||| ||||    
T  7963 aacgactattatt 7951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 84; Significance: 9e-40; HSPs: 2)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 218 - 365
Target Start/End: Original strand, 105673 - 105820
Alignment:
Q  218 tattatactcttatttattgaatttcatcaaacttaactactccactaactacaattaataatggagttttagtaaatgttactaattttaccattaaaa 317  Q
    |||||||| ||||||||| |||||||||  |||||||||||| ||||||||||||||||||| || ||||||||||| | || ||||||||||||| |||    
T  105673 tattatacccttatttatcgaatttcattcaacttaactacttcactaactacaattaataagggtgttttagtaaacgctattaattttaccattgaaa 105772  T
Q  318 tcaacacaattaatcatttccttaataattgtgcacaaatcttaaacg 365  Q
    | ||||||||||||||||| |||||||||  |||| ||||||||||||    
T  105773 taaacacaattaatcatttacttaataatcatgcataaatcttaaacg 105820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 301 - 337
Target Start/End: Original strand, 105184 - 105220
Alignment:
Q  301 taattttaccattaaaatcaacacaattaatcatttc 337  Q
    ||||||||||||||||||||||| |||| ||||||||    
T  105184 taattttaccattaaaatcaacaaaatttatcatttc 105220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1809 (Bit Score: 83; Significance: 4e-39; HSPs: 1)
Name: scaffold1809
Description:

Target: scaffold1809; HSP #1
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 163 - 331
Target Start/End: Complemental strand, 864 - 697
Alignment:
Q  163 ctcaaaataattgtcactttacaataccaatgcaatatttattannnnnnnccactattatactcttatttattgaatttcatcaaacttaactactcca 262  Q
    ||||||||||||||||||||||||||||| ||||| ||| | ||       |||||||||||| |||||||||||||||||||| || ||||  ||||||    
T  864 ctcaaaataattgtcactttacaataccattgcaacattgaatatttttt-ccactattatacccttatttattgaatttcatccaatttaaacactcca 766  T
Q  263 ctaactacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaacacaattaat 331  Q
    ||||||||||| ||||| || ||||||||||||| || ||||||||||||| |||||||||||||||||    
T  765 ctaactacaatcaataaaggtgttttagtaaatgctattaattttaccattgaaatcaacacaattaat 697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0583 (Bit Score: 75; Significance: 2e-34; HSPs: 1)
Name: scaffold0583
Description:

Target: scaffold0583; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 218 - 368
Target Start/End: Original strand, 2014 - 2164
Alignment:
Q  218 tattatactcttatttattgaatttcatcaaacttaactactccactaactacaattaataatggagttttagtaaatgttactaattttaccattaaaa 317  Q
    |||||||| |||||||||||||||||||| ||  ||| || ||||||||||||||||||||| |  ||||||||||||| || |||||||| |||| |||    
T  2014 tattatacccttatttattgaatttcatcgaatgtaattaatccactaactacaattaataaggatgttttagtaaatgatattaattttatcattgaaa 2113  T
Q  318 tcaacacaattaatcatttccttaataattgtgcacaaatcttaaacgact 368  Q
    | |||||||||||||| |||||||||||| |||||  || |||||||||||    
T  2114 ttaacacaattaatcacttccttaataatcgtgcatgaaccttaaacgact 2164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0330 (Bit Score: 75; Significance: 2e-34; HSPs: 1)
Name: scaffold0330
Description:

Target: scaffold0330; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 228 - 366
Target Start/End: Original strand, 5389 - 5527
Alignment:
Q  228 ttatttattgaatttcatcaaacttaactactccactaactacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaacacaat 327  Q
    ||||||||||||||||||| |||||||||||||||||||||| ||||||||| |   |||||||||||| || ||||||||||||| || |||||||| |    
T  5389 ttatttattgaatttcatccaacttaactactccactaactaaaattaataaggatattttagtaaatgatattaattttaccattgaattcaacacagt 5488  T
Q  328 taatcatttccttaataattgtgcacaaatcttaaacga 366  Q
    ||||||||| |||||||||  || ||||| |||||||||    
T  5489 taatcattttcttaataatcatgtacaaaccttaaacga 5527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182 (Bit Score: 74; Significance: 8e-34; HSPs: 1)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 218 - 355
Target Start/End: Complemental strand, 20479 - 20342
Alignment:
Q  218 tattatactcttatttattgaatttcatcaaacttaactactccactaactacaattaataatggagttttagtaaatgttactaattttaccattaaaa 317  Q
    |||||||| || ||||||||||||||||| |||||||||||| |||||||| |||||||||| ||  ||||| |||||| |||||||||||| || ||||    
T  20479 tattataccctcatttattgaatttcatccaacttaactacttcactaactgcaattaataagggtattttactaaatgatactaattttacaatcaaaa 20380  T
Q  318 tcaacacaattaatcatttccttaataattgtgcacaa 355  Q
    |||||||||||||||||||  ||||||||  |||||||    
T  20379 tcaacacaattaatcatttaattaataatcttgcacaa 20342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 67; Significance: 1e-29; HSPs: 3)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 268 - 366
Target Start/End: Original strand, 39127 - 39225
Alignment:
Q  268 tacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaacacaattaatcatttccttaataattgtgcacaaatcttaaacga 366  Q
    ||||||||||||||  ||||||||||||| ||||||||| | ||| ||||||||||||||||||||||||||||||||||||||| ||| |||||||||    
T  39127 tacaattaataatgatgttttagtaaatgatactaatttcatcatcaaaatcaacacaattaatcatttccttaataattgtgcaaaaaccttaaacga 39225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 163 - 301
Target Start/End: Complemental strand, 252984 - 252848
Alignment:
Q  163 ctcaaaataattgtcactttacaataccaatgcaatatttattannnnnnnccactattatactcttatttattgaatttcatcaaacttaactactcca 262  Q
    ||||||| ||||||||||||| ||||||||||||| ||||||||       | | ||||||||||||||||||||||||||||  |||||||||||||||    
T  252984 ctcaaaaaaattgtcactttataataccaatgcaacatttattatttttttc-attattatactcttatttattgaatttcattcaacttaactactcca 252886  T
Q  263 ctaactacaattaataatggagttttagtaaatgttact 301  Q
     | |||||||||||||| |   |||||||||||| ||||    
T  252885 at-actacaattaataacgatattttagtaaatgatact 252848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #3
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 298 - 369
Target Start/End: Complemental strand, 252575 - 252504
Alignment:
Q  298 tactaattttaccattaaaatcaacacaattaatcatttccttaataattgtgcacaaatcttaaacgacta 369  Q
    |||||||||||||||||||||||||| ||||||||||||| ||||||||  | | |||| ||||||||||||    
T  252575 tactaattttaccattaaaatcaacataattaatcatttctttaataatcatacgcaaaccttaaacgacta 252504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 215 - 336
Target Start/End: Complemental strand, 14297 - 14178
Alignment:
Q  215 cactattatactcttatttattgaatttcatcaaacttaactactccactaactacaattaataatggagttttagtaaatgttactaattttaccatta 314  Q
    |||||||||||  |||||||||||||||||||||| |||||||||||| |||||| |||||||||   |  ||   |||||| |||||||||||| ||||    
T  14297 cactattatacctttatttattgaatttcatcaaatttaactactccattaactataattaataaaaaaaatt--ataaatgatactaattttacgatta 14200  T
Q  315 aaatcaacacaattaatcattt 336  Q
    ||||||||||| ||||||||||    
T  14199 aaatcaacacatttaatcattt 14178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 166 - 265
Target Start/End: Original strand, 76229 - 76328
Alignment:
Q  166 aaaataattgtcactttacaataccaatgcaatatttattannnnnnnccactattatactcttatttattgaatttcatcaaacttaactactccacta 265  Q
    ||||||||||||||| || |||| ||||||| |||||||||         |||||||||| |||||||||||||||||||| ||||||||||||||||||    
T  76229 aaaataattgtcactctataatatcaatgcagtatttattattttttttgactattatacccttatttattgaatttcatctaacttaactactccacta 76328  T

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Target: scaffold0470 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: scaffold0470
Description:

Target: scaffold0470; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 299 - 376
Target Start/End: Original strand, 1055 - 1132
Alignment:
Q  299 actaattttaccattaaaatcaacacaattaatcatttccttaataattgtgcacaaatcttaaacgactaatattgt 376  Q
    ||||||||||||||| ||||||||| ||||||||||||  |||||||| |||   |||||||||||||||||||||||    
T  1055 actaattttaccattgaaatcaacataattaatcatttttttaataatcgtgtgtaaatcttaaacgactaatattgt 1132  T

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Target: scaffold0464 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: scaffold0464
Description:

Target: scaffold0464; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 288 - 369
Target Start/End: Complemental strand, 6341 - 6260
Alignment:
Q  288 tagtaaatgttactaattttaccattaaaatcaacacaattaatcatttccttaataattgtgcacaaatcttaaacgacta 369  Q
    |||| |||| ||||||||||| ||||| |||||||||||||||||||||| |||| ||| |||||||||  |||||||||||    
T  6341 tagtgaatgatactaattttatcattagaatcaacacaattaatcatttcgttaaaaatcgtgcacaaactttaaacgacta 6260  T

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Target: scaffold1391 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold1391
Description:

Target: scaffold1391; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 264 - 352
Target Start/End: Complemental strand, 1897 - 1809
Alignment:
Q  264 taactacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaacacaattaatcatttccttaataattgtgca 352  Q
    |||||| ||||||||| || ||||||||||||| || |||||| || || |||||||||||||||||| |||| ||||||||| |||||    
T  1897 taactataattaataaaggtgttttagtaaatgatattaatttgactatcaaaatcaacacaattaattattttcttaataatcgtgca 1809  T

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Target: scaffold0188 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 232 - 364
Target Start/End: Original strand, 6741 - 6872
Alignment:
Q  232 ttattgaatttcatcaaacttaactactccactaactacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaacacaattaat 331  Q
    ||||| |||||||||| ||||||||| || | |||||| ||||||||| |   |||||||||||  ||||||||||| |||| |||| || |||||||||    
T  6741 ttattaaatttcatcatacttaactattctagtaacta-aattaataaagacattttagtaaataatactaattttatcattgaaattaaaacaattaat 6839  T
Q  332 catttccttaataattgtgcacaaatcttaaac 364  Q
    ||||||||||| |||   ||||||| |||||||    
T  6840 catttccttaaaaatcacgcacaaaccttaaac 6872  T

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Target: scaffold0021 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 252 - 350
Target Start/End: Original strand, 126194 - 126292
Alignment:
Q  252 taactactccactaactacaattaataatggagttttagtaaatgttactaattttaccattaaaatcaacacaattaatcatttccttaataattgtg 350  Q
    |||||| | ||||||||| |||||| ||  |  |||||||||||| |||  |||||  ||||||||| ||||| |||||||||||||||||||||||||    
T  126194 taactatttcactaactataattaacaacagtcttttagtaaatgatacacattttgtcattaaaataaacactattaatcatttccttaataattgtg 126292  T

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Target: scaffold2146 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold2146
Description:

Target: scaffold2146; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 221 - 318
Target Start/End: Original strand, 397 - 494
Alignment:
Q  221 tatactcttatttattgaatttcatcaaacttaactactccactaactacaattaataatggagttttagtaaatgttactaattttaccattaaaat 318  Q
    ||||| |||||||||||||||  | |  |||||| || |||||||||||| |||||||| || |||||| | |||| ||||||||||| |||||||||    
T  397 tatacccttatttattgaattctaccttacttaattaatccactaactactattaataagggtgttttattgaatgatactaattttaacattaaaat 494  T

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Target: scaffold0279 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0279
Description:

Target: scaffold0279; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 284 - 345
Target Start/End: Original strand, 12053 - 12114
Alignment:
Q  284 gttttagtaaatgttactaattttaccattaaaatcaacacaattaatcatttccttaataa 345  Q
    ||||||||||||| |||  ||||| |||||||||||||||  | ||||||||||||||||||    
T  12053 gttttagtaaatgatacacattttgccattaaaatcaacatcagtaatcatttccttaataa 12114  T

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Target: scaffold0001 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 299 - 343
Target Start/End: Original strand, 143900 - 143944
Alignment:
Q  299 actaattttaccattaaaatcaacacaattaatcatttccttaat 343  Q
    ||||||||||||||| | ||||||||||||||| |||||||||||    
T  143900 actaattttaccattgatatcaacacaattaattatttccttaat 143944  T

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Target: scaffold0024 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 333 - 376
Target Start/End: Complemental strand, 84424 - 84381
Alignment:
Q  333 atttccttaataattgtgcacaaatcttaaacgactaatattgt 376  Q
    |||| ||||||||| ||||||||| |||||||||||||||||||    
T  84424 atttgcttaataatcgtgcacaaaccttaaacgactaatattgt 84381  T

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Target: scaffold0068 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 232 - 276
Target Start/End: Original strand, 56664 - 56708
Alignment:
Q  232 ttattgaatttcatcaaacttaactactccactaactacaattaa 276  Q
    |||||||||||| || ||||||| || ||||||||||||||||||    
T  56664 ttattgaatttcttccaacttaattattccactaactacaattaa 56708  T

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