View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4303_high_2 (Length: 484)
Name: NF4303_high_2
Description: NF4303
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4303_high_2 |
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Alignment Details
Target: chr7 (Bit Score: 387; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 387; E-Value: 0
Query Start/End: Original strand, 9 - 468
Target Start/End: Original strand, 40254855 - 40255308
Alignment:
| Q |
9 |
gagatgaagcaagagatcaacttcaattgttaataagaaattttcagccatctacacaagctaagacatatagtactattccacaacttgatcatccaaa |
108 |
Q |
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| T |
40254855 |
gagatgaagcaagagatcaacttcaattgttaataagaaattttcagccatctacacaagctaagacatatagtactattccacaacttgatcatccaaa |
40254954 |
T |
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| Q |
109 |
gcaacaactttcatgtgatttatctttgtctagcctccaatcaaataatgagaagaaaatttcctcaatgaattcatctaacacaagaatagttgaatca |
208 |
Q |
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| T |
40254955 |
gcaacaactttcatgtgatttatctttgtctagcctccaatcaaataatgagaagaaaatttcctcaatgaattcatctaacacaagaatagttgaatca |
40255054 |
T |
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| Q |
209 |
tgcaacatggccttnnnnnnnnnnnnnnttcatcaaaacaaatttggaatagtaaatgcaaatattgatgatgttgcttcctctagcctttcacttcata |
308 |
Q |
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| T |
40255055 |
tgcaacatggccttaaaaaagcaaaaaattcatcaaaacaaatttggaatagtaaatgcaaatattgatgatgttgcttcctctagcctttcacttcata |
40255154 |
T |
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| Q |
309 |
gcatcaacaaggagaattatttatctaacaatatttatgataaggaaagtgttgttccaacttctttgagtttagcatttccttcgagttctaatggacc |
408 |
Q |
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| T |
40255155 |
gcatcaacaaggagaattatttatctaacaatatttatgataaggaaagtgttgttccaacttctttgagtttagcatttccttcgagttctaatggacc |
40255254 |
T |
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| Q |
409 |
ttctcatatgcgtcatggttctggttctggttctggtttattggtgaagaatgaaccaat |
468 |
Q |
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| T |
40255255 |
ttctcatatgcgtca------tagttctggttctggtttattagtgaagaatgaaccaat |
40255308 |
T |
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