View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4303_high_9 (Length: 324)
Name: NF4303_high_9
Description: NF4303
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4303_high_9 |
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Alignment Details
Target: chr7 (Bit Score: 278; Significance: 1e-155; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 278; E-Value: 1e-155
Query Start/End: Original strand, 1 - 313
Target Start/End: Original strand, 45694321 - 45694634
Alignment:
| Q |
1 |
cgtaacacctcgtccatgatcagttcttttaacaccgattgattcatcctcaaaatcctacaaattaacnnnnnnnn-ttgattatagtagaacacaata |
99 |
Q |
| |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||| |
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| T |
45694321 |
cgtaacacctcgtccatgatcagttcttttaacaccgattgattcatcctcaaaatcctataaattaacaaaaaaaaattgattatagtagaacacaata |
45694420 |
T |
|
| Q |
100 |
aaataagccatactcataagataattcaagaaataggacaacttaattataagatatttacttcactgtgccactcagaatcctcagagtccagattttt |
199 |
Q |
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|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45694421 |
aaataagccatactcataagataattcaagaaataggacaacttaattataagatatttacttcactgtgccactcagaatcctcagagtccagattttt |
45694520 |
T |
|
| Q |
200 |
tcgcttcaaattttgattagcatcatctgaacttctatgcacgccattgtcagagcaaacagaggaagaggctactgttagctccgtacattttttaaaa |
299 |
Q |
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|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45694521 |
tcgcttcaaattttgattagcatcatctgaacttctatgcacgccattgtcagagcaaacagaggaagaggctactgttagctccgtacattttttaaaa |
45694620 |
T |
|
| Q |
300 |
acttcttgaccttt |
313 |
Q |
| |
|
|||||||||||||| |
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|
| T |
45694621 |
acttcttgaccttt |
45694634 |
T |
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