View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4303_low_9 (Length: 334)
Name: NF4303_low_9
Description: NF4303
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4303_low_9 |
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Alignment Details
Target: chr4 (Bit Score: 290; Significance: 1e-163; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 290; E-Value: 1e-163
Query Start/End: Original strand, 5 - 315
Target Start/End: Original strand, 43953596 - 43953906
Alignment:
| Q |
5 |
taataaaatcatcatataaggtattttctaaagtttaacagaaaaacagattaaatacaaaagcatttttcaatggtgctgaaatgccttatctcgatct |
104 |
Q |
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| T |
43953596 |
taataaaatcatcatataaggtattttctaaagtttaacagaaaaacagattaaatacaaaagcatttttcaatggtgctgaaatgccttatctcgatct |
43953695 |
T |
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| Q |
105 |
aacctctagagagtttgttagaatccaaaaatgccttgacaacttcagaagacataagatgtgagattccttgtgcttcgagagctgcctcgtagacttc |
204 |
Q |
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| T |
43953696 |
aacctctagagagtttgttagaatccaaaaatgccttgacaacttcagaagacataagatgtgagattccttgtgcttcgagagctgcctcgtagacttc |
43953795 |
T |
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| Q |
205 |
annnnnnnctagtatcaccatctacatttctcccgggaaaatgcaaaacaaaatgatttctttcggtatcttgtatttcagctggaaggcgaataaatct |
304 |
Q |
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| T |
43953796 |
atttttttctagtatcaccatctacatttctcccgggaaaatgcaaaacaaaatgatttctttcggtatcttgtatttcagctggaaggcgaataaatct |
43953895 |
T |
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| Q |
305 |
atcctgaacag |
315 |
Q |
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| T |
43953896 |
atcctgaacag |
43953906 |
T |
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