View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4304-Insertion-23 (Length: 43)

Name: NF4304-Insertion-23
Description: NF4304
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4304-Insertion-23
NF4304-Insertion-23
[»] scaffold0444 (1 HSPs)
scaffold0444 (5-43)||(14165-14203)
[»] scaffold0230 (1 HSPs)
scaffold0230 (5-43)||(14721-14759)
[»] scaffold0044 (1 HSPs)
scaffold0044 (5-43)||(41171-41209)
[»] chr8 (20 HSPs)
chr8 (5-43)||(24485393-24485431)
chr8 (5-43)||(1485173-1485211)
chr8 (5-43)||(4541723-4541761)
chr8 (5-43)||(5852645-5852683)
chr8 (5-43)||(14408797-14408835)
chr8 (5-43)||(22002526-22002564)
chr8 (6-43)||(18677416-18677453)
chr8 (6-43)||(20045549-20045586)
chr8 (6-43)||(45289901-45289938)
chr8 (5-43)||(4484051-4484089)
chr8 (5-43)||(14824547-14824585)
chr8 (5-43)||(18816661-18816699)
chr8 (13-43)||(18834302-18834332)
chr8 (5-43)||(23914755-23914793)
chr8 (5-37)||(4380975-4381007)
chr8 (5-35)||(21514208-21514238)
chr8 (5-35)||(22208109-22208139)
chr8 (5-43)||(22258486-22258524)
chr8 (5-35)||(22474597-22474627)
chr8 (5-35)||(36727489-36727519)
[»] chr7 (31 HSPs)
chr7 (5-43)||(32126262-32126300)
chr7 (5-43)||(41523691-41523729)
chr7 (5-43)||(41526153-41526191)
chr7 (5-43)||(58549-58587)
chr7 (5-43)||(457094-457132)
chr7 (5-43)||(4691077-4691115)
chr7 (5-43)||(14948472-14948510)
chr7 (5-43)||(15376066-15376104)
chr7 (5-43)||(16460174-16460212)
chr7 (5-43)||(20384476-20384514)
chr7 (5-43)||(26355332-26355370)
chr7 (5-43)||(26357784-26357822)
chr7 (6-43)||(18431484-18431521)
chr7 (5-42)||(43745245-43745282)
chr7 (5-42)||(45847007-45847044)
chr7 (7-43)||(24703003-24703039)
chr7 (7-43)||(24705450-24705486)
chr7 (5-43)||(13870117-13870155)
chr7 (5-43)||(14161037-14161075)
chr7 (5-43)||(16233293-16233331)
chr7 (5-43)||(16410831-16410869)
chr7 (5-43)||(16580492-16580530)
chr7 (5-43)||(20484851-20484889)
chr7 (5-43)||(27217633-27217671)
chr7 (6-43)||(15576016-15576053)
chr7 (6-43)||(18628337-18628374)
chr7 (6-43)||(18641043-18641080)
chr7 (5-40)||(14317908-14317943)
chr7 (12-43)||(18875035-18875066)
chr7 (5-35)||(9743260-9743290)
chr7 (13-43)||(15720654-15720684)
[»] chr6 (17 HSPs)
chr6 (5-43)||(1540264-1540302)
chr6 (5-43)||(12743091-12743129)
chr6 (5-43)||(17882848-17882886)
chr6 (5-43)||(2290531-2290569)
chr6 (5-43)||(18333945-18333983)
chr6 (5-43)||(19858275-19858313)
chr6 (5-43)||(24423318-24423356)
chr6 (5-43)||(26923798-26923836)
chr6 (5-43)||(33862568-33862606)
chr6 (5-43)||(33865049-33865087)
chr6 (6-43)||(21686353-21686390)
chr6 (6-43)||(22782999-22783036)
chr6 (5-43)||(8055802-8055840)
chr6 (6-43)||(2077076-2077113)
chr6 (6-43)||(23656172-23656209)
chr6 (5-35)||(23501294-23501324)
chr6 (5-35)||(31734548-31734578)
[»] chr5 (16 HSPs)
chr5 (5-43)||(264121-264159)
chr5 (6-43)||(29346752-29346789)
chr5 (6-43)||(29349225-29349262)
chr5 (6-43)||(29351698-29351735)
chr5 (5-43)||(10732290-10732328)
chr5 (5-43)||(18744480-18744518)
chr5 (5-43)||(23199574-23199612)
chr5 (5-43)||(39245907-39245945)
chr5 (5-43)||(42244715-42244753)
chr5 (5-35)||(8833387-8833417)
chr5 (5-43)||(38620207-38620245)
chr5 (15-43)||(23065287-23065315)
chr5 (13-43)||(660302-660332)
chr5 (5-35)||(14025988-14026018)
chr5 (13-43)||(32607463-32607493)
chr5 (5-43)||(39364155-39364193)
[»] chr4 (24 HSPs)
chr4 (5-43)||(14873438-14873476)
chr4 (7-43)||(50221692-50221728)
chr4 (5-43)||(2424803-2424841)
chr4 (5-43)||(7640539-7640577)
chr4 (5-43)||(15117705-15117743)
chr4 (5-43)||(18238965-18239003)
chr4 (5-43)||(19243474-19243512)
chr4 (5-43)||(29268127-29268165)
chr4 (5-43)||(44616062-44616100)
chr4 (5-43)||(44772436-44772474)
chr4 (6-43)||(3485740-3485777)
chr4 (6-43)||(12033125-12033162)
chr4 (6-43)||(25031036-25031073)
chr4 (5-40)||(44023784-44023819)
chr4 (5-43)||(1836871-1836909)
chr4 (5-43)||(14718065-14718103)
chr4 (5-35)||(25513583-25513613)
chr4 (13-43)||(26445716-26445746)
chr4 (5-35)||(40230147-40230177)
chr4 (5-42)||(18022886-18022923)
chr4 (5-40)||(12424474-12424509)
chr4 (5-40)||(33186738-33186773)
chr4 (5-35)||(19566099-19566129)
chr4 (5-35)||(46741040-46741070)
[»] chr3 (22 HSPs)
chr3 (5-43)||(13151141-13151179)
chr3 (5-43)||(13153609-13153647)
chr3 (5-43)||(28847972-28848010)
chr3 (5-43)||(6468487-6468525)
chr3 (5-43)||(10541640-10541678)
chr3 (5-43)||(14520094-14520132)
chr3 (5-43)||(15978306-15978344)
chr3 (5-43)||(17208172-17208210)
chr3 (5-43)||(17463949-17463987)
chr3 (5-43)||(34160097-34160135)
chr3 (5-43)||(45577794-45577832)
chr3 (5-43)||(55477263-55477301)
chr3 (7-43)||(16453629-16453665)
chr3 (13-43)||(6159280-6159310)
chr3 (5-43)||(7780698-7780736)
chr3 (5-43)||(15413202-15413240)
chr3 (5-43)||(45606258-45606296)
chr3 (5-42)||(14671658-14671695)
chr3 (5-35)||(11563306-11563336)
chr3 (13-43)||(14442050-14442080)
chr3 (5-43)||(14508679-14508717)
chr3 (5-35)||(53646240-53646270)
[»] chr2 (27 HSPs)
chr2 (5-43)||(572169-572207)
chr2 (5-43)||(21315844-21315882)
chr2 (5-43)||(23136339-23136377)
chr2 (5-43)||(18809714-18809752)
chr2 (5-43)||(23610307-23610345)
chr2 (5-43)||(23711366-23711404)
chr2 (5-43)||(26506150-26506188)
chr2 (5-43)||(27920117-27920155)
chr2 (5-43)||(39683087-39683125)
chr2 (6-43)||(21368940-21368977)
chr2 (6-43)||(38968251-38968288)
chr2 (5-43)||(23131633-23131671)
chr2 (5-43)||(23134100-23134138)
chr2 (5-43)||(26508628-26508666)
chr2 (5-43)||(28577876-28577914)
chr2 (5-43)||(32038850-32038888)
chr2 (6-43)||(9785414-9785451)
chr2 (5-42)||(24897548-24897585)
chr2 (5-42)||(24904985-24905022)
chr2 (6-42)||(24900032-24900068)
chr2 (6-42)||(24902509-24902545)
chr2 (12-43)||(21335641-21335672)
chr2 (5-43)||(22690511-22690548)
chr2 (5-43)||(22695107-22695144)
chr2 (5-35)||(23968804-23968834)
chr2 (5-35)||(27852266-27852296)
chr2 (5-43)||(34401875-34401913)
[»] chr1 (13 HSPs)
chr1 (5-43)||(21922642-21922680)
chr1 (5-43)||(13989637-13989675)
chr1 (5-43)||(14237794-14237832)
chr1 (5-43)||(21474437-21474475)
chr1 (5-43)||(21841542-21841580)
chr1 (5-43)||(41373245-41373283)
chr1 (6-43)||(16362690-16362727)
chr1 (6-43)||(23593085-23593122)
chr1 (6-43)||(51083049-51083086)
chr1 (11-41)||(24719882-24719912)
chr1 (13-42)||(20588512-20588541)
chr1 (13-42)||(20593050-20593079)
chr1 (5-43)||(4596027-4596065)
[»] scaffold0363 (1 HSPs)
scaffold0363 (6-43)||(10017-10054)
[»] scaffold0454 (1 HSPs)
scaffold0454 (5-43)||(354-392)
[»] scaffold0254 (1 HSPs)
scaffold0254 (5-43)||(21522-21560)
[»] scaffold0134 (1 HSPs)
scaffold0134 (5-43)||(38593-38631)
[»] scaffold0032 (1 HSPs)
scaffold0032 (5-43)||(62219-62257)
[»] scaffold0029 (1 HSPs)
scaffold0029 (5-43)||(12061-12099)
[»] scaffold0028 (6 HSPs)
scaffold0028 (5-43)||(134984-135022)
scaffold0028 (5-43)||(137453-137491)
scaffold0028 (5-43)||(139922-139960)
scaffold0028 (5-43)||(142391-142429)
scaffold0028 (5-43)||(144860-144898)
scaffold0028 (5-35)||(3422-3452)
[»] scaffold0023 (1 HSPs)
scaffold0023 (5-43)||(95182-95220)
[»] scaffold0414 (1 HSPs)
scaffold0414 (6-43)||(11530-11567)
[»] scaffold0203 (1 HSPs)
scaffold0203 (6-43)||(18309-18346)
[»] scaffold0109 (2 HSPs)
scaffold0109 (6-43)||(159-196)
scaffold0109 (5-43)||(5461-5499)
[»] scaffold0232 (1 HSPs)
scaffold0232 (5-43)||(4101-4139)
[»] scaffold0098 (1 HSPs)
scaffold0098 (13-43)||(39982-40012)
[»] scaffold0695 (1 HSPs)
scaffold0695 (6-43)||(6716-6753)
[»] scaffold0630 (1 HSPs)
scaffold0630 (6-43)||(8896-8933)
[»] scaffold0146 (1 HSPs)
scaffold0146 (6-43)||(22860-22897)
[»] scaffold0063 (2 HSPs)
scaffold0063 (6-43)||(39092-39129)
scaffold0063 (6-40)||(62554-62588)
[»] scaffold0575 (1 HSPs)
scaffold0575 (12-43)||(5516-5547)
[»] scaffold0431 (1 HSPs)
scaffold0431 (5-40)||(5466-5501)
[»] scaffold0859 (1 HSPs)
scaffold0859 (5-35)||(4374-4404)
[»] scaffold0546 (1 HSPs)
scaffold0546 (5-43)||(7808-7846)
[»] scaffold0401 (1 HSPs)
scaffold0401 (5-35)||(8662-8692)
[»] scaffold0369 (1 HSPs)
scaffold0369 (13-43)||(16128-16158)
[»] scaffold0039 (1 HSPs)
scaffold0039 (5-35)||(10109-10139)
[»] scaffold0011 (1 HSPs)
scaffold0011 (5-35)||(33295-33325)


Alignment Details
Target: scaffold0444 (Bit Score: 39; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0444
Description:

Target: scaffold0444; HSP #1
Raw Score: 39; E-Value: 0.00000000000004
Query Start/End: Original strand, 5 - 43
Target Start/End: Complemental strand, 14203 - 14165
Alignment:
Q  5 gtttttggtcaagttttatatggttttgagtctcttttg 43  Q
    |||||||||||||||||||||||||||||||||||||||    
T  14203 gtttttggtcaagttttatatggttttgagtctcttttg 14165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0230 (Bit Score: 39; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0230
Description:

Target: scaffold0230; HSP #1
Raw Score: 39; E-Value: 0.00000000000004
Query Start/End: Original strand, 5 - 43
Target Start/End: Complemental strand, 14759 - 14721
Alignment:
Q  5 gtttttggtcaagttttatatggttttgagtctcttttg 43  Q
    |||||||||||||||||||||||||||||||||||||||    
T  14759 gtttttggtcaagttttatatggttttgagtctcttttg 14721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 39; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 39; E-Value: 0.00000000000004
Query Start/End: Original strand, 5 - 43
Target Start/End: Complemental strand, 41209 - 41171
Alignment:
Q  5 gtttttggtcaagttttatatggttttgagtctcttttg 43  Q
    |||||||||||||||||||||||||||||||||||||||    
T  41209 gtttttggtcaagttttatatggttttgagtctcttttg 41171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 39; Significance: 0.00000000000004; HSPs: 20)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 39; E-Value: 0.00000000000004
Query Start/End: Original strand, 5 - 43
Target Start/End: Original strand, 24485393 - 24485431
Alignment:
Q  5 gtttttggtcaagttttatatggttttgagtctcttttg 43  Q
    |||||||||||||||||||||||||||||||||||||||    
T  24485393 gtttttggtcaagttttatatggttttgagtctcttttg 24485431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 35; E-Value: 0.00000000001
Query Start/End: Original strand, 5 - 43
Target Start/End: Complemental strand, 1485211 - 1485173
Alignment:
Q  5 gtttttggtcaagttttatatggttttgagtctcttttg 43  Q
    ||||| |||||||||||||||||||||||||||||||||    
T  1485211 gttttgggtcaagttttatatggttttgagtctcttttg 1485173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 35; E-Value: 0.00000000001
Query Start/End: Original strand, 5 - 43
Target Start/End: Original strand, 4541723 - 4541761
Alignment:
Q  5 gtttttggtcaagttttatatggttttgagtctcttttg 43  Q
    ||||| |||||||||||||||||||||||||||||||||    
T  4541723 gttttgggtcaagttttatatggttttgagtctcttttg 4541761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 35; E-Value: 0.00000000001
Query Start/End: Original strand, 5 - 43
Target Start/End: Original strand, 5852645 - 5852683
Alignment:
Q  5 gtttttggtcaagttttatatggttttgagtctcttttg 43  Q
    ||||| |||||||||||||||||||||||||||||||||    
T  5852645 gttttgggtcaagttttatatggttttgagtctcttttg 5852683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 35; E-Value: 0.00000000001
Query Start/End: Original strand, 5 - 43
Target Start/End: Original strand, 14408797 - 14408835
Alignment:
Q  5 gtttttggtcaagttttatatggttttgagtctcttttg 43  Q
    ||||| |||||||||||||||||||||||||||||||||    
T  14408797 gttttgggtcaagttttatatggttttgagtctcttttg 14408835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 35; E-Value: 0.00000000001
Query Start/End: Original strand, 5 - 43
Target Start/End: Complemental strand, 22002564 - 22002526
Alignment:
Q  5 gtttttggtcaagttttatatggttttgagtctcttttg 43  Q
    |||||||||||||||||||||| ||||||||||||||||    
T  22002564 gtttttggtcaagttttatatgattttgagtctcttttg 22002526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 34; E-Value: 0.00000000004
Query Start/End: Original strand, 6 - 43
Target Start/End: Original strand, 18677416 - 18677453
Alignment:
Q  6 tttttggtcaagttttatatggttttgagtctcttttg 43  Q
    |||| |||||||||||||||||||||||||||||||||    
T  18677416 ttttgggtcaagttttatatggttttgagtctcttttg 18677453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.00000000004
Query Start/End: Original strand, 6 - 43
Target Start/End: Original strand, 20045549 - 20045586
Alignment:
Q  6 tttttggtcaagttttatatggttttgagtctcttttg 43  Q
    |||| |||||||||||||||||||||||||||||||||    
T  20045549 ttttgggtcaagttttatatggttttgagtctcttttg 20045586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 34; E-Value: 0.00000000004
Query Start/End: Original strand, 6 - 43
Target Start/End: Original strand, 45289901 - 45289938
Alignment:
Q  6 tttttggtcaagttttatatggttttgagtctcttttg 43  Q
    |||| |||||||||||||||||||||||||||||||||    
T  45289901 ttttgggtcaagttttatatggttttgagtctcttttg 45289938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 31; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 43
Target Start/End: Complemental strand, 4484089 - 4484051
Alignment:
Q  5 gtttttggtcaagttttatatggttttgagtctcttttg 43  Q
    ||||| ||||||||||||||||||||||||||| |||||    
T  4484089 gttttgggtcaagttttatatggttttgagtcttttttg 4484051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 31; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 43
Target Start/End: Complemental strand, 14824585 - 14824547
Alignment:
Q  5 gtttttggtcaagttttatatggttttgagtctcttttg 43  Q
    ||||| ||||||||||||||||||||||||||| |||||    
T  14824585 gttttgggtcaagttttatatggttttgagtcttttttg 14824547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 43
Target Start/End: Original strand, 18816661 - 18816699
Alignment:
Q  5 gtttttggtcaagttttatatggttttgagtctcttttg 43  Q
    ||||| |||||||||||||||| ||||||||||||||||    
T  18816661 gttttgggtcaagttttatatgtttttgagtctcttttg 18816699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 43
Target Start/End: Complemental strand, 18834332 - 18834302
Alignment:
Q  13 tcaagttttatatggttttgagtctcttttg 43  Q
    |||||||||||||||||||||||||||||||    
T  18834332 tcaagttttatatggttttgagtctcttttg 18834302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 43
Target Start/End: Complemental strand, 23914793 - 23914755
Alignment:
Q  5 gtttttggtcaagttttatatggttttgagtctcttttg 43  Q
    ||||| |||||||||||||||| ||||||||||||||||    
T  23914793 gttttgggtcaagttttatatgattttgagtctcttttg 23914755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 29; E-Value: 0.00000004
Query Start/End: Original strand, 5 - 37
Target Start/End: Original strand, 4380975 - 4381007
Alignment:
Q  5 gtttttggtcaagttttatatggttttgagtct 37  Q
    ||||| |||||||||||||||||||||||||||    
T  4380975 gttttgggtcaagttttatatggttttgagtct 4381007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 27; E-Value: 0.0000006
Query Start/End: Original strand, 5 - 35
Target Start/End: Complemental strand, 21514238 - 21514208
Alignment:
Q  5 gtttttggtcaagttttatatggttttgagt 35  Q
    ||||||||||| |||||||||||||||||||    
T  21514238 gtttttggtcatgttttatatggttttgagt 21514208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 27; E-Value: 0.0000006
Query Start/End: Original strand, 5 - 35
Target Start/End: Complemental strand, 22208139 - 22208109
Alignment:
Q  5 gtttttggtcaagttttatatggttttgagt 35  Q
    ||||| |||||||||||||||||||||||||    
T  22208139 gttttgggtcaagttttatatggttttgagt 22208109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 27; E-Value: 0.0000006
Query Start/End: Original strand, 5 - 43
Target Start/End: Original strand, 22258486 - 22258524
Alignment:
Q  5 gtttttggtcaagttttatatggttttgagtctcttttg 43  Q
    ||||| ||||||||||||||||||||| || ||||||||    
T  22258486 gttttgggtcaagttttatatggttttcagactcttttg 22258524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 27; E-Value: 0.0000006
Query Start/End: Original strand, 5 - 35
Target Start/End: Complemental strand, 22474627 - 22474597
Alignment:
Q  5 gtttttggtcaagttttatatggttttgagt 35  Q
    ||||| |||||||||||||||||||||||||    
T  22474627 gttttgggtcaagttttatatggttttgagt 22474597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 27; E-Value: 0.0000006
Query Start/End: Original strand, 5 - 35
Target Start/End: Original strand, 36727489 - 36727519
Alignment:
Q  5 gtttttggtcaagttttatatggttttgagt 35  Q
    |||||||||||||||||| ||||||||||||    
T  36727489 gtttttggtcaagttttagatggttttgagt 36727519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 39; Significance: 0.00000000000004; HSPs: 31)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 39; E-Value: 0.00000000000004
Query Start/End: Original strand, 5 - 43
Target Start/End: Complemental strand, 32126300 - 32126262
Alignment:
Q  5 gtttttggtcaagttttatatggttttgagtctcttttg 43  Q
    |||||||||||||||||||||||||||||||||||||||    
T  32126300 gtttttggtcaagttttatatggttttgagtctcttttg 32126262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 39; E-Value: 0.00000000000004
Query Start/End: Original strand, 5 - 43
Target Start/End: Complemental strand, 41523729 - 41523691
Alignment:
Q  5 gtttttggtcaagttttatatggttttgagtctcttttg 43  Q
    |||||||||||||||||||||||||||||||||||||||    
T  41523729 gtttttggtcaagttttatatggttttgagtctcttttg 41523691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 39; E-Value: 0.00000000000004
Query Start/End: Original strand, 5 - 43
Target Start/End: Complemental strand, 41526191 - 41526153
Alignment:
Q  5 gtttttggtcaagttttatatggttttgagtctcttttg 43  Q
    |||||||||||||||||||||||||||||||||||||||    
T  41526191 gtttttggtcaagttttatatggttttgagtctcttttg 41526153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 35; E-Value: 0.00000000001
Query Start/End: Original strand, 5 - 43
Target Start/End: Original strand, 58549 - 58587
Alignment:
Q  5 gtttttggtcaagttttatatggttttgagtctcttttg 43  Q
    ||||||| |||||||||||||||||||||||||||||||    
T  58549 gtttttgttcaagttttatatggttttgagtctcttttg 58587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 35; E-Value: 0.00000000001
Query Start/End: Original strand, 5 - 43
Target Start/End: Complemental strand, 457132 - 457094
Alignment:
Q  5 gtttttggtcaagttttatatggttttgagtctcttttg 43  Q
    ||||| |||||||||||||||||||||||||||||||||    
T  457132 gttttgggtcaagttttatatggttttgagtctcttttg 457094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 35; E-Value: 0.00000000001
Query Start/End: Original strand, 5 - 43
Target Start/End: Original strand, 4691077 - 4691115
Alignment:
Q  5 gtttttggtcaagttttatatggttttgagtctcttttg 43  Q
    ||||| |||||||||||||||||||||||||||||||||    
T  4691077 gttttgggtcaagttttatatggttttgagtctcttttg 4691115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 35; E-Value: 0.00000000001
Query Start/End: Original strand, 5 - 43
Target Start/End: Original strand, 14948472 - 14948510
Alignment:
Q  5 gtttttggtcaagttttatatggttttgagtctcttttg 43  Q
    |||||||||||||||||||||| ||||||||||||||||    
T  14948472 gtttttggtcaagttttatatgattttgagtctcttttg 14948510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.00000000001
Query Start/End: Original strand, 5 - 43
Target Start/End: Original strand, 15376066 - 15376104
Alignment:
Q  5 gtttttggtcaagttttatatggttttgagtctcttttg 43  Q
    ||||| |||||||||||||||||||||||||||||||||    
T  15376066 gttttgggtcaagttttatatggttttgagtctcttttg 15376104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.00000000001
Query Start/End: Original strand, 5 - 43
Target Start/End: Original strand, 16460174 - 16460212
Alignment:
Q  5 gtttttggtcaagttttatatggttttgagtctcttttg 43  Q
    ||||| |||||||||||||||||||||||||||||||||    
T  16460174 gttttgggtcaagttttatatggttttgagtctcttttg 16460212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.00000000001
Query Start/End: Original strand, 5 - 43
Target Start/End: Original strand, 20384476 - 20384514
Alignment:
Q  5 gtttttggtcaagttttatatggttttgagtctcttttg 43  Q
    ||||| |||||||||||||||||||||||||||||||||    
T  20384476 gttttgggtcaagttttatatggttttgagtctcttttg 20384514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.00000000001
Query Start/End: Original strand, 5 - 43
Target Start/End: Original strand, 26355332 - 26355370
Alignment:
Q  5 gtttttggtcaagttttatatggttttgagtctcttttg 43  Q
    ||||| |||||||||||||||||||||||||||||||||    
T  26355332 gttttgggtcaagttttatatggttttgagtctcttttg 26355370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.00000000001
Query Start/End: Original strand, 5 - 43
Target Start/End: Original strand, 26357784 - 26357822
Alignment:
Q  5 gtttttggtcaagttttatatggttttgagtctcttttg 43  Q
    ||||| |||||||||||||||||||||||||||||||||    
T  26357784 gttttgggtcaagttttatatggttttgagtctcttttg 26357822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.00000000004
Query Start/End: Original strand, 6 - 43
Target Start/End: Complemental strand, 18431521 - 18431484
Alignment:
Q  6 tttttggtcaagttttatatggttttgagtctcttttg 43  Q
    |||| |||||||||||||||||||||||||||||||||    
T  18431521 ttttgggtcaagttttatatggttttgagtctcttttg 18431484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.00000000004
Query Start/End: Original strand, 5 - 42
Target Start/End: Complemental strand, 43745282 - 43745245
Alignment:
Q  5 gtttttggtcaagttttatatggttttgagtctctttt 42  Q
    ||||| ||||||||||||||||||||||||||||||||    
T  43745282 gttttgggtcaagttttatatggttttgagtctctttt 43745245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.00000000004
Query Start/End: Original strand, 5 - 42
Target Start/End: Original strand, 45847007 - 45847044
Alignment:
Q  5 gtttttggtcaagttttatatggttttgagtctctttt 42  Q
    ||||| ||||||||||||||||||||||||||||||||    
T  45847007 gttttgggtcaagttttatatggttttgagtctctttt 45847044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.0000000002
Query Start/End: Original strand, 7 - 43
Target Start/End: Complemental strand, 24703039 - 24703003
Alignment:
Q  7 ttttggtcaagttttatatggttttgagtctcttttg 43  Q
    |||||||||||||||||||| ||||||||||||||||    
T  24703039 ttttggtcaagttttatatgattttgagtctcttttg 24703003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.0000000002
Query Start/End: Original strand, 7 - 43
Target Start/End: Complemental strand, 24705486 - 24705450
Alignment:
Q  7 ttttggtcaagttttatatggttttgagtctcttttg 43  Q
    |||||||||||||||||||| ||||||||||||||||    
T  24705486 ttttggtcaagttttatatgattttgagtctcttttg 24705450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 43
Target Start/End: Complemental strand, 13870155 - 13870117
Alignment:
Q  5 gtttttggtcaagttttatatggttttgagtctcttttg 43  Q
    ||||| |||||| ||||||||||||||||||||||||||    
T  13870155 gttttgggtcaaattttatatggttttgagtctcttttg 13870117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 43
Target Start/End: Original strand, 14161037 - 14161075
Alignment:
Q  5 gtttttggtcaagttttatatggttttgagtctcttttg 43  Q
    ||||| |||||||||||||||||||||||| ||||||||    
T  14161037 gttttgggtcaagttttatatggttttgagactcttttg 14161075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 43
Target Start/End: Complemental strand, 16233331 - 16233293
Alignment:
Q  5 gtttttggtcaagttttatatggttttgagtctcttttg 43  Q
    ||||| ||||||||||||| |||||||||||||||||||    
T  16233331 gttttgggtcaagttttatgtggttttgagtctcttttg 16233293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 43
Target Start/End: Complemental strand, 16410869 - 16410831
Alignment:
Q  5 gtttttggtcaagttttatatggttttgagtctcttttg 43  Q
    ||||| |||||||||| ||||||||||||||||||||||    
T  16410869 gttttgggtcaagtttaatatggttttgagtctcttttg 16410831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 43
Target Start/End: Complemental strand, 16580530 - 16580492
Alignment:
Q  5 gtttttggtcaagttttatatggttttgagtctcttttg 43  Q
    ||||| ||||||||||| |||||||||||||||||||||    
T  16580530 gttttgggtcaagttttctatggttttgagtctcttttg 16580492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 43
Target Start/End: Complemental strand, 20484889 - 20484851
Alignment:
Q  5 gtttttggtcaagttttatatggttttgagtctcttttg 43  Q
    ||||| |||||||||||||||| ||||||||||||||||    
T  20484889 gttttgggtcaagttttatatgattttgagtctcttttg 20484851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 43
Target Start/End: Complemental strand, 27217671 - 27217633
Alignment:
Q  5 gtttttggtcaagttttatatggttttgagtctcttttg 43  Q
    ||||| ||||||||||||||||||||||||||| |||||    
T  27217671 gttttgggtcaagttttatatggttttgagtcttttttg 27217633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.00000001
Query Start/End: Original strand, 6 - 43
Target Start/End: Original strand, 15576016 - 15576053
Alignment:
Q  6 tttttggtcaagttttatatggttttgagtctcttttg 43  Q
    |||| |||||||||||||||| ||||||||||||||||    
T  15576016 ttttgggtcaagttttatatgattttgagtctcttttg 15576053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.00000001
Query Start/End: Original strand, 6 - 43
Target Start/End: Complemental strand, 18628374 - 18628337
Alignment:
Q  6 tttttggtcaagttttatatggttttgagtctcttttg 43  Q
    |||| ||||||||||| |||||||||||||||||||||    
T  18628374 ttttgggtcaagttttgtatggttttgagtctcttttg 18628337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.00000001
Query Start/End: Original strand, 6 - 43
Target Start/End: Complemental strand, 18641080 - 18641043
Alignment:
Q  6 tttttggtcaagttttatatggttttgagtctcttttg 43  Q
    |||| ||||||||||| |||||||||||||||||||||    
T  18641080 ttttgggtcaagttttgtatggttttgagtctcttttg 18641043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 28; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 40
Target Start/End: Complemental strand, 14317943 - 14317908
Alignment:
Q  5 gtttttggtcaagttttatatggttttgagtctctt 40  Q
    ||||| ||||||||||||||||||||||||| ||||    
T  14317943 gttttgggtcaagttttatatggttttgagtgtctt 14317908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 28; E-Value: 0.0000001
Query Start/End: Original strand, 12 - 43
Target Start/End: Original strand, 18875035 - 18875066
Alignment:
Q  12 gtcaagttttatatggttttgagtctcttttg 43  Q
    ||||| ||||||||||||||||||||||||||    
T  18875035 gtcaatttttatatggttttgagtctcttttg 18875066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 27; E-Value: 0.0000006
Query Start/End: Original strand, 5 - 35
Target Start/End: Original strand, 9743260 - 9743290
Alignment:
Q  5 gtttttggtcaagttttatatggttttgagt 35  Q
    ||||| |||||||||||||||||||||||||    
T  9743260 gttttgggtcaagttttatatggttttgagt 9743290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 27; E-Value: 0.0000006
Query Start/End: Original strand, 13 - 43
Target Start/End: Complemental strand, 15720684 - 15720654
Alignment:
Q  13 tcaagttttatatggttttgagtctcttttg 43  Q
    |||||||||||||||||||||| ||||||||    
T  15720684 tcaagttttatatggttttgagcctcttttg 15720654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 39; Significance: 0.00000000000004; HSPs: 17)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 39; E-Value: 0.00000000000004
Query Start/End: Original strand, 5 - 43
Target Start/End: Original strand, 1540264 - 1540302
Alignment:
Q  5 gtttttggtcaagttttatatggttttgagtctcttttg 43  Q
    |||||||||||||||||||||||||||||||||||||||    
T  1540264 gtttttggtcaagttttatatggttttgagtctcttttg 1540302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 39; E-Value: 0.00000000000004
Query Start/End: Original strand, 5 - 43
Target Start/End: Complemental strand, 12743129 - 12743091
Alignment:
Q  5 gtttttggtcaagttttatatggttttgagtctcttttg 43  Q
    |||||||||||||||||||||||||||||||||||||||    
T  12743129 gtttttggtcaagttttatatggttttgagtctcttttg 12743091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 39; E-Value: 0.00000000000004
Query Start/End: Original strand, 5 - 43
Target Start/End: Original strand, 17882848 - 17882886
Alignment:
Q  5 gtttttggtcaagttttatatggttttgagtctcttttg 43  Q
    |||||||||||||||||||||||||||||||||||||||    
T  17882848 gtttttggtcaagttttatatggttttgagtctcttttg 17882886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 35; E-Value: 0.00000000001
Query Start/End: Original strand, 5 - 43
Target Start/End: Original strand, 2290531 - 2290569
Alignment:
Q  5 gtttttggtcaagttttatatggttttgagtctcttttg 43  Q
    ||||| |||||||||||||||||||||||||||||||||    
T  2290531 gttttgggtcaagttttatatggttttgagtctcttttg 2290569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 35; E-Value: 0.00000000001
Query Start/End: Original strand, 5 - 43
Target Start/End: Original strand, 18333945 - 18333983
Alignment:
Q  5 gtttttggtcaagttttatatggttttgagtctcttttg 43  Q
    ||||| |||||||||||||||||||||||||||||||||    
T  18333945 gttttgggtcaagttttatatggttttgagtctcttttg 18333983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 35; E-Value: 0.00000000001
Query Start/End: Original strand, 5 - 43
Target Start/End: Original strand, 19858275 - 19858313
Alignment:
Q  5 gtttttggtcaagttttatatggttttgagtctcttttg 43  Q
    ||||| |||||||||||||||||||||||||||||||||    
T  19858275 gttttgggtcaagttttatatggttttgagtctcttttg 19858313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 35; E-Value: 0.00000000001
Query Start/End: Original strand, 5 - 43
Target Start/End: Complemental strand, 24423356 - 24423318
Alignment:
Q  5 gtttttggtcaagttttatatggttttgagtctcttttg 43  Q
    ||||| |||||||||||||||||||||||||||||||||    
T  24423356 gttttgggtcaagttttatatggttttgagtctcttttg 24423318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.00000000001
Query Start/End: Original strand, 5 - 43
Target Start/End: Original strand, 26923798 - 26923836
Alignment:
Q  5 gtttttggtcaagttttatatggttttgagtctcttttg 43  Q
    ||||| |||||||||||||||||||||||||||||||||    
T  26923798 gttttgggtcaagttttatatggttttgagtctcttttg 26923836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.00000000001
Query Start/End: Original strand, 5 - 43
Target Start/End: Complemental strand, 33862606 - 33862568
Alignment:
Q  5 gtttttggtcaagttttatatggttttgagtctcttttg 43  Q
    |||||||||||||||||||||| ||||||||||||||||    
T  33862606 gtttttggtcaagttttatatgattttgagtctcttttg 33862568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.00000000001
Query Start/End: Original strand, 5 - 43
Target Start/End: Complemental strand, 33865087 - 33865049
Alignment:
Q  5 gtttttggtcaagttttatatggttttgagtctcttttg 43  Q
    ||||| |||||||||||||||||||||||||||||||||    
T  33865087 gttttgggtcaagttttatatggttttgagtctcttttg 33865049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.00000000004
Query Start/End: Original strand, 6 - 43
Target Start/End: Original strand, 21686353 - 21686390
Alignment:
Q  6 tttttggtcaagttttatatggttttgagtctcttttg 43  Q
    |||| |||||||||||||||||||||||||||||||||    
T  21686353 ttttgggtcaagttttatatggttttgagtctcttttg 21686390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.00000000004
Query Start/End: Original strand, 6 - 43
Target Start/End: Complemental strand, 22783036 - 22782999
Alignment:
Q  6 tttttggtcaagttttatatggttttgagtctcttttg 43  Q
    |||| |||||||||||||||||||||||||||||||||    
T  22783036 ttttgggtcaagttttatatggttttgagtctcttttg 22782999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 43
Target Start/End: Complemental strand, 8055840 - 8055802
Alignment:
Q  5 gtttttggtcaagttttatatggttttgagtctcttttg 43  Q
    ||||| ||||||||||||| |||||||||||||||||||    
T  8055840 gttttgggtcaagttttatgtggttttgagtctcttttg 8055802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.00000001
Query Start/End: Original strand, 6 - 43
Target Start/End: Complemental strand, 2077113 - 2077076
Alignment:
Q  6 tttttggtcaagttttatatggttttgagtctcttttg 43  Q
    |||| |||||||||||||||| ||||||||||||||||    
T  2077113 ttttgggtcaagttttatatgattttgagtctcttttg 2077076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.00000001
Query Start/End: Original strand, 6 - 43
Target Start/End: Complemental strand, 23656209 - 23656172
Alignment:
Q  6 tttttggtcaagttttatatggttttgagtctcttttg 43  Q
    |||| |||||||||||||||| ||||||||||||||||    
T  23656209 ttttgggtcaagttttatatgattttgagtctcttttg 23656172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 27; E-Value: 0.0000006
Query Start/End: Original strand, 5 - 35
Target Start/End: Complemental strand, 23501324 - 23501294
Alignment:
Q  5 gtttttggtcaagttttatatggttttgagt 35  Q
    ||||| |||||||||||||||||||||||||    
T  23501324 gttttgggtcaagttttatatggttttgagt 23501294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 27; E-Value: 0.0000006
Query Start/End: Original strand, 5 - 35
Target Start/End: Complemental strand, 31734578 - 31734548
Alignment:
Q  5 gtttttggtcaagttttatatggttttgagt 35  Q
    ||||| |||||||||||||||||||||||||    
T  31734578 gttttgggtcaagttttatatggttttgagt 31734548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 39; Significance: 0.00000000000004; HSPs: 16)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 39; E-Value: 0.00000000000004
Query Start/End: Original strand, 5 - 43
Target Start/End: Original strand, 264121 - 264159
Alignment:
Q  5 gtttttggtcaagttttatatggttttgagtctcttttg 43  Q
    |||||||||||||||||||||||||||||||||||||||    
T  264121 gtttttggtcaagttttatatggttttgagtctcttttg 264159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 38; E-Value: 0.0000000000002
Query Start/End: Original strand, 6 - 43
Target Start/End: Complemental strand, 29346789 - 29346752
Alignment:
Q  6 tttttggtcaagttttatatggttttgagtctcttttg 43  Q
    ||||||||||||||||||||||||||||||||||||||    
T  29346789 tttttggtcaagttttatatggttttgagtctcttttg 29346752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 38; E-Value: 0.0000000000002
Query Start/End: Original strand, 6 - 43
Target Start/End: Complemental strand, 29349262 - 29349225
Alignment:
Q  6 tttttggtcaagttttatatggttttgagtctcttttg 43  Q
    ||||||||||||||||||||||||||||||||||||||    
T  29349262 tttttggtcaagttttatatggttttgagtctcttttg 29349225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 38; E-Value: 0.0000000000002
Query Start/End: Original strand, 6 - 43
Target Start/End: Complemental strand, 29351735 - 29351698
Alignment:
Q  6 tttttggtcaagttttatatggttttgagtctcttttg 43  Q
    ||||||||||||||||||||||||||||||||||||||    
T  29351735 tttttggtcaagttttatatggttttgagtctcttttg 29351698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 35; E-Value: 0.00000000001
Query Start/End: Original strand, 5 - 43
Target Start/End: Original strand, 10732290 - 10732328
Alignment:
Q  5 gtttttggtcaagttttatatggttttgagtctcttttg 43  Q
    |||||||||||||||||||||| ||||||||||||||||    
T  10732290 gtttttggtcaagttttatatgattttgagtctcttttg 10732328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 35; E-Value: 0.00000000001
Query Start/End: Original strand, 5 - 43
Target Start/End: Complemental strand, 18744518 - 18744480
Alignment:
Q  5 gtttttggtcaagttttatatggttttgagtctcttttg 43  Q
    ||||| |||||||||||||||||||||||||||||||||    
T  18744518 gttttgggtcaagttttatatggttttgagtctcttttg 18744480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 35; E-Value: 0.00000000001
Query Start/End: Original strand, 5 - 43
Target Start/End: Original strand, 23199574 - 23199612
Alignment:
Q  5 gtttttggtcaagttttatatggttttgagtctcttttg 43  Q
    ||||| |||||||||||||||||||||||||||||||||    
T  23199574 gttttgggtcaagttttatatggttttgagtctcttttg 23199612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.00000000001
Query Start/End: Original strand, 5 - 43
Target Start/End: Complemental strand, 39245945 - 39245907
Alignment:
Q  5 gtttttggtcaagttttatatggttttgagtctcttttg 43  Q
    ||||| |||||||||||||||||||||||||||||||||    
T  39245945 gttttgggtcaagttttatatggttttgagtctcttttg 39245907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 35; E-Value: 0.00000000001
Query Start/End: Original strand, 5 - 43
Target Start/End: Original strand, 42244715 - 42244753
Alignment:
Q  5 gtttttggtcaagttttatatggttttgagtctcttttg 43  Q
    |||||||||||||||||||||| ||||||||||||||||    
T  42244715 gtttttggtcaagttttatatgattttgagtctcttttg 42244753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 31; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 35
Target Start/End: Original strand, 8833387 - 8833417
Alignment:
Q  5 gtttttggtcaagttttatatggttttgagt 35  Q
    |||||||||||||||||||||||||||||||    
T  8833387 gtttttggtcaagttttatatggttttgagt 8833417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 43
Target Start/End: Complemental strand, 38620245 - 38620207
Alignment:
Q  5 gtttttggtcaagttttatatggttttgagtctcttttg 43  Q
    ||||| ||||| |||||||||||||||||||||||||||    
T  38620245 gttttgggtcatgttttatatggttttgagtctcttttg 38620207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 29; E-Value: 0.00000004
Query Start/End: Original strand, 15 - 43
Target Start/End: Complemental strand, 23065315 - 23065287
Alignment:
Q  15 aagttttatatggttttgagtctcttttg 43  Q
    |||||||||||||||||||||||||||||    
T  23065315 aagttttatatggttttgagtctcttttg 23065287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 27; E-Value: 0.0000006
Query Start/End: Original strand, 13 - 43
Target Start/End: Complemental strand, 660332 - 660302
Alignment:
Q  13 tcaagttttatatggttttgagtctcttttg 43  Q
    |||||||| ||||||||||||||||||||||    
T  660332 tcaagtttgatatggttttgagtctcttttg 660302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 27; E-Value: 0.0000006
Query Start/End: Original strand, 5 - 35
Target Start/End: Original strand, 14025988 - 14026018
Alignment:
Q  5 gtttttggtcaagttttatatggttttgagt 35  Q
    ||||| |||||||||||||||||||||||||    
T  14025988 gttttgggtcaagttttatatggttttgagt 14026018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 27; E-Value: 0.0000006
Query Start/End: Original strand, 13 - 43
Target Start/End: Original strand, 32607463 - 32607493
Alignment:
Q  13 tcaagttttatatggttttgagtctcttttg 43  Q
    |||||||||||||| ||||||||||||||||    
T  32607463 tcaagttttatatgtttttgagtctcttttg 32607493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 27; E-Value: 0.0000006
Query Start/End: Original strand, 5 - 43
Target Start/End: Complemental strand, 39364193 - 39364155
Alignment:
Q  5 gtttttggtcaagttttatatggttttgagtctcttttg 43  Q
    ||||| |||||| ||||||||||||| ||||||||||||    
T  39364193 gttttgggtcaaattttatatggtttcgagtctcttttg 39364155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 39; Significance: 0.00000000000004; HSPs: 24)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 39; E-Value: 0.00000000000004
Query Start/End: Original strand, 5 - 43
Target Start/End: Original strand, 14873438 - 14873476
Alignment:
Q  5 gtttttggtcaagttttatatggttttgagtctcttttg 43  Q
    |||||||||||||||||||||||||||||||||||||||    
T  14873438 gtttttggtcaagttttatatggttttgagtctcttttg 14873476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 37; E-Value: 0.0000000000006
Query Start/End: Original strand, 7 - 43
Target Start/End: Original strand, 50221692 - 50221728
Alignment:
Q  7 ttttggtcaagttttatatggttttgagtctcttttg 43  Q
    |||||||||||||||||||||||||||||||||||||    
T  50221692 ttttggtcaagttttatatggttttgagtctcttttg 50221728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 35; E-Value: 0.00000000001
Query Start/End: Original strand, 5 - 43
Target Start/End: Original strand, 2424803 - 2424841
Alignment:
Q  5 gtttttggtcaagttttatatggttttgagtctcttttg 43  Q
    ||||| |||||||||||||||||||||||||||||||||    
T  2424803 gttttgggtcaagttttatatggttttgagtctcttttg 2424841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 35; E-Value: 0.00000000001
Query Start/End: Original strand, 5 - 43
Target Start/End: Original strand, 7640539 - 7640577
Alignment:
Q  5 gtttttggtcaagttttatatggttttgagtctcttttg 43  Q
    ||||| |||||||||||||||||||||||||||||||||    
T  7640539 gttttgggtcaagttttatatggttttgagtctcttttg 7640577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 35; E-Value: 0.00000000001
Query Start/End: Original strand, 5 - 43
Target Start/End: Original strand, 15117705 - 15117743
Alignment:
Q  5 gtttttggtcaagttttatatggttttgagtctcttttg 43  Q
    ||||| |||||||||||||||||||||||||||||||||    
T  15117705 gttttgggtcaagttttatatggttttgagtctcttttg 15117743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 35; E-Value: 0.00000000001
Query Start/End: Original strand, 5 - 43
Target Start/End: Original strand, 18238965 - 18239003
Alignment:
Q  5 gtttttggtcaagttttatatggttttgagtctcttttg 43  Q
    ||||| |||||||||||||||||||||||||||||||||    
T  18238965 gttttgggtcaagttttatatggttttgagtctcttttg 18239003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 35; E-Value: 0.00000000001
Query Start/End: Original strand, 5 - 43
Target Start/End: Complemental strand, 19243512 - 19243474
Alignment:
Q  5 gtttttggtcaagttttatatggttttgagtctcttttg 43  Q
    ||||| |||||||||||||||||||||||||||||||||    
T  19243512 gttttgggtcaagttttatatggttttgagtctcttttg 19243474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.00000000001
Query Start/End: Original strand, 5 - 43
Target Start/End: Complemental strand, 29268165 - 29268127
Alignment:
Q  5 gtttttggtcaagttttatatggttttgagtctcttttg 43  Q
    |||||||||||||||||||||||||| ||||||||||||    
T  29268165 gtttttggtcaagttttatatggtttcgagtctcttttg 29268127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.00000000001
Query Start/End: Original strand, 5 - 43
Target Start/End: Complemental strand, 44616100 - 44616062
Alignment:
Q  5 gtttttggtcaagttttatatggttttgagtctcttttg 43  Q
    |||||||||||||||||||||||||| ||||||||||||    
T  44616100 gtttttggtcaagttttatatggtttcgagtctcttttg 44616062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.00000000001
Query Start/End: Original strand, 5 - 43
Target Start/End: Original strand, 44772436 - 44772474
Alignment:
Q  5 gtttttggtcaagttttatatggttttgagtctcttttg 43  Q
    ||||| |||||||||||||||||||||||||||||||||    
T  44772436 gttttgggtcaagttttatatggttttgagtctcttttg 44772474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.00000000004
Query Start/End: Original strand, 6 - 43
Target Start/End: Complemental strand, 3485777 - 3485740
Alignment:
Q  6 tttttggtcaagttttatatggttttgagtctcttttg 43  Q
    |||| |||||||||||||||||||||||||||||||||    
T  3485777 ttttgggtcaagttttatatggttttgagtctcttttg 3485740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.00000000004
Query Start/End: Original strand, 6 - 43
Target Start/End: Original strand, 12033125 - 12033162
Alignment:
Q  6 tttttggtcaagttttatatggttttgagtctcttttg 43  Q
    |||| |||||||||||||||||||||||||||||||||    
T  12033125 ttttgggtcaagttttatatggttttgagtctcttttg 12033162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.00000000004
Query Start/End: Original strand, 6 - 43
Target Start/End: Complemental strand, 25031073 - 25031036
Alignment:
Q  6 tttttggtcaagttttatatggttttgagtctcttttg 43  Q
    |||| |||||||||||||||||||||||||||||||||    
T  25031073 ttttgggtcaagttttatatggttttgagtctcttttg 25031036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.0000000006
Query Start/End: Original strand, 5 - 40
Target Start/End: Original strand, 44023784 - 44023819
Alignment:
Q  5 gtttttggtcaagttttatatggttttgagtctctt 40  Q
    ||||||||||||||||||||||||||||||| ||||    
T  44023784 gtttttggtcaagttttatatggttttgagtgtctt 44023819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 43
Target Start/End: Original strand, 1836871 - 1836909
Alignment:
Q  5 gtttttggtcaagttttatatggttttgagtctcttttg 43  Q
    ||||| ||||||||||||| |||||||||||||||||||    
T  1836871 gttttgggtcaagttttatgtggttttgagtctcttttg 1836909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 43
Target Start/End: Original strand, 14718065 - 14718103
Alignment:
Q  5 gtttttggtcaagttttatatggttttgagtctcttttg 43  Q
    ||||||| |||||||||||||| ||||||||||||||||    
T  14718065 gtttttgatcaagttttatatgattttgagtctcttttg 14718103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 35
Target Start/End: Complemental strand, 25513613 - 25513583
Alignment:
Q  5 gtttttggtcaagttttatatggttttgagt 35  Q
    |||||||||||||||||||||||||||||||    
T  25513613 gtttttggtcaagttttatatggttttgagt 25513583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 43
Target Start/End: Complemental strand, 26445746 - 26445716
Alignment:
Q  13 tcaagttttatatggttttgagtctcttttg 43  Q
    |||||||||||||||||||||||||||||||    
T  26445746 tcaagttttatatggttttgagtctcttttg 26445716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 35
Target Start/End: Complemental strand, 40230177 - 40230147
Alignment:
Q  5 gtttttggtcaagttttatatggttttgagt 35  Q
    |||||||||||||||||||||||||||||||    
T  40230177 gtttttggtcaagttttatatggttttgagt 40230147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.00000001
Query Start/End: Original strand, 5 - 42
Target Start/End: Complemental strand, 18022923 - 18022886
Alignment:
Q  5 gtttttggtcaagttttatatggttttgagtctctttt 42  Q
    ||||| |||||||||||||||| |||||||||||||||    
T  18022923 gttttgggtcaagttttatatgattttgagtctctttt 18022886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 28; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 40
Target Start/End: Original strand, 12424474 - 12424509
Alignment:
Q  5 gtttttggtcaagttttatatggttttgagtctctt 40  Q
    ||||| ||||||||||||||||||||||||| ||||    
T  12424474 gttttgggtcaagttttatatggttttgagtttctt 12424509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 28; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 40
Target Start/End: Complemental strand, 33186773 - 33186738
Alignment:
Q  5 gtttttggtcaagttttatatggttttgagtctctt 40  Q
    ||||| ||||||||||||||||||||||||| ||||    
T  33186773 gttttgggtcaagttttatatggttttgagtgtctt 33186738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 27; E-Value: 0.0000006
Query Start/End: Original strand, 5 - 35
Target Start/End: Original strand, 19566099 - 19566129
Alignment:
Q  5 gtttttggtcaagttttatatggttttgagt 35  Q
    ||||| |||||||||||||||||||||||||    
T  19566099 gttttgggtcaagttttatatggttttgagt 19566129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 27; E-Value: 0.0000006
Query Start/End: Original strand, 5 - 35
Target Start/End: Complemental strand, 46741070 - 46741040
Alignment:
Q  5 gtttttggtcaagttttatatggttttgagt 35  Q
    ||||| |||||||||||||||||||||||||    
T  46741070 gttttgggtcaagttttatatggttttgagt 46741040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 39; Significance: 0.00000000000004; HSPs: 22)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 39; E-Value: 0.00000000000004
Query Start/End: Original strand, 5 - 43
Target Start/End: Original strand, 13151141 - 13151179
Alignment:
Q  5 gtttttggtcaagttttatatggttttgagtctcttttg 43  Q
    |||||||||||||||||||||||||||||||||||||||    
T  13151141 gtttttggtcaagttttatatggttttgagtctcttttg 13151179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 39; E-Value: 0.00000000000004
Query Start/End: Original strand, 5 - 43
Target Start/End: Original strand, 13153609 - 13153647
Alignment:
Q  5 gtttttggtcaagttttatatggttttgagtctcttttg 43  Q
    |||||||||||||||||||||||||||||||||||||||    
T  13153609 gtttttggtcaagttttatatggttttgagtctcttttg 13153647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 39; E-Value: 0.00000000000004
Query Start/End: Original strand, 5 - 43
Target Start/End: Original strand, 28847972 - 28848010
Alignment:
Q  5 gtttttggtcaagttttatatggttttgagtctcttttg 43  Q
    |||||||||||||||||||||||||||||||||||||||    
T  28847972 gtttttggtcaagttttatatggttttgagtctcttttg 28848010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 35; E-Value: 0.00000000001
Query Start/End: Original strand, 5 - 43
Target Start/End: Original strand, 6468487 - 6468525
Alignment:
Q  5 gtttttggtcaagttttatatggttttgagtctcttttg 43  Q
    ||||| |||||||||||||||||||||||||||||||||    
T  6468487 gttttgggtcaagttttatatggttttgagtctcttttg 6468525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 35; E-Value: 0.00000000001
Query Start/End: Original strand, 5 - 43
Target Start/End: Original strand, 10541640 - 10541678
Alignment:
Q  5 gtttttggtcaagttttatatggttttgagtctcttttg 43  Q
    ||||| |||||||||||||||||||||||||||||||||    
T  10541640 gttttgggtcaagttttatatggttttgagtctcttttg 10541678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 35; E-Value: 0.00000000001
Query Start/End: Original strand, 5 - 43
Target Start/End: Complemental strand, 14520132 - 14520094
Alignment:
Q  5 gtttttggtcaagttttatatggttttgagtctcttttg 43  Q
    ||||| |||||||||||||||||||||||||||||||||    
T  14520132 gttttgggtcaagttttatatggttttgagtctcttttg 14520094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 35; E-Value: 0.00000000001
Query Start/End: Original strand, 5 - 43
Target Start/End: Complemental strand, 15978344 - 15978306
Alignment:
Q  5 gtttttggtcaagttttatatggttttgagtctcttttg 43  Q
    ||||| |||||||||||||||||||||||||||||||||    
T  15978344 gttttgggtcaagttttatatggttttgagtctcttttg 15978306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 35; E-Value: 0.00000000001
Query Start/End: Original strand, 5 - 43
Target Start/End: Complemental strand, 17208210 - 17208172
Alignment:
Q  5 gtttttggtcaagttttatatggttttgagtctcttttg 43  Q
    ||||| |||||||||||||||||||||||||||||||||    
T  17208210 gttttcggtcaagttttatatggttttgagtctcttttg 17208172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 35; E-Value: 0.00000000001
Query Start/End: Original strand, 5 - 43
Target Start/End: Complemental strand, 17463987 - 17463949
Alignment:
Q  5 gtttttggtcaagttttatatggttttgagtctcttttg 43  Q
    ||||| |||||||||||||||||||||||||||||||||    
T  17463987 gttttgggtcaagttttatatggttttgagtctcttttg 17463949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.00000000001
Query Start/End: Original strand, 5 - 43
Target Start/End: Complemental strand, 34160135 - 34160097
Alignment:
Q  5 gtttttggtcaagttttatatggttttgagtctcttttg 43  Q
    ||||| |||||||||||||||||||||||||||||||||    
T  34160135 gttttgggtcaagttttatatggttttgagtctcttttg 34160097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.00000000001
Query Start/End: Original strand, 5 - 43
Target Start/End: Original strand, 45577794 - 45577832
Alignment:
Q  5 gtttttggtcaagttttatatggttttgagtctcttttg 43  Q
    ||||| |||||||||||||||||||||||||||||||||    
T  45577794 gttttgggtcaagttttatatggttttgagtctcttttg 45577832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.00000000001
Query Start/End: Original strand, 5 - 43
Target Start/End: Complemental strand, 55477301 - 55477263
Alignment:
Q  5 gtttttggtcaagttttatatggttttgagtctcttttg 43  Q
    ||||| |||||||||||||||||||||||||||||||||    
T  55477301 gttttgggtcaagttttatatggttttgagtctcttttg 55477263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.0000000002
Query Start/End: Original strand, 7 - 43
Target Start/End: Original strand, 16453629 - 16453665
Alignment:
Q  7 ttttggtcaagttttatatggttttgagtctcttttg 43  Q
    |||||||||||||||||||| ||||||||||||||||    
T  16453629 ttttggtcaagttttatatgattttgagtctcttttg 16453665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 31; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 43
Target Start/End: Complemental strand, 6159310 - 6159280
Alignment:
Q  13 tcaagttttatatggttttgagtctcttttg 43  Q
    |||||||||||||||||||||||||||||||    
T  6159310 tcaagttttatatggttttgagtctcttttg 6159280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 43
Target Start/End: Original strand, 7780698 - 7780736
Alignment:
Q  5 gtttttggtcaagttttatatggttttgagtctcttttg 43  Q
    ||||||| |||||||||||||| ||||||||||||||||    
T  7780698 gtttttgatcaagttttatatgattttgagtctcttttg 7780736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 43
Target Start/End: Complemental strand, 15413240 - 15413202
Alignment:
Q  5 gtttttggtcaagttttatatggttttgagtctcttttg 43  Q
    ||||| ||||||||||||||||||||||||||| |||||    
T  15413240 gttttgggtcaagttttatatggttttgagtctattttg 15413202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 43
Target Start/End: Original strand, 45606258 - 45606296
Alignment:
Q  5 gtttttggtcaagttttatatggttttgagtctcttttg 43  Q
    ||||| ||||||||||||| |||||||||||||||||||    
T  45606258 gttttgggtcaagttttatgtggttttgagtctcttttg 45606296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.00000001
Query Start/End: Original strand, 5 - 42
Target Start/End: Complemental strand, 14671695 - 14671658
Alignment:
Q  5 gtttttggtcaagttttatatggttttgagtctctttt 42  Q
    ||||| |||||||||||||||| |||||||||||||||    
T  14671695 gttttgggtcaagttttatatgattttgagtctctttt 14671658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 27; E-Value: 0.0000006
Query Start/End: Original strand, 5 - 35
Target Start/End: Complemental strand, 11563336 - 11563306
Alignment:
Q  5 gtttttggtcaagttttatatggttttgagt 35  Q
    ||||| |||||||||||||||||||||||||    
T  11563336 gttttgggtcaagttttatatggttttgagt 11563306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 27; E-Value: 0.0000006
Query Start/End: Original strand, 13 - 43
Target Start/End: Complemental strand, 14442080 - 14442050
Alignment:
Q  13 tcaagttttatatggttttgagtctcttttg 43  Q
    |||||||||| ||||||||||||||||||||    
T  14442080 tcaagttttacatggttttgagtctcttttg 14442050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 27; E-Value: 0.0000006
Query Start/End: Original strand, 5 - 43
Target Start/End: Complemental strand, 14508717 - 14508679
Alignment:
Q  5 gtttttggtcaagttttatatggttttgagtctcttttg 43  Q
    ||||| ||||||||||||||||||||| || ||||||||    
T  14508717 gttttgggtcaagttttatatggttttcagactcttttg 14508679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 27; E-Value: 0.0000006
Query Start/End: Original strand, 5 - 35
Target Start/End: Original strand, 53646240 - 53646270
Alignment:
Q  5 gtttttggtcaagttttatatggttttgagt 35  Q
    ||||| |||||||||||||||||||||||||    
T  53646240 gttttgggtcaagttttatatggttttgagt 53646270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 39; Significance: 0.00000000000004; HSPs: 27)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 39; E-Value: 0.00000000000004
Query Start/End: Original strand, 5 - 43
Target Start/End: Complemental strand, 572207 - 572169
Alignment:
Q  5 gtttttggtcaagttttatatggttttgagtctcttttg 43  Q
    |||||||||||||||||||||||||||||||||||||||    
T  572207 gtttttggtcaagttttatatggttttgagtctcttttg 572169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 39; E-Value: 0.00000000000004
Query Start/End: Original strand, 5 - 43
Target Start/End: Original strand, 21315844 - 21315882
Alignment:
Q  5 gtttttggtcaagttttatatggttttgagtctcttttg 43  Q
    |||||||||||||||||||||||||||||||||||||||    
T  21315844 gtttttggtcaagttttatatggttttgagtctcttttg 21315882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 39; E-Value: 0.00000000000004
Query Start/End: Original strand, 5 - 43
Target Start/End: Complemental strand, 23136377 - 23136339
Alignment:
Q  5 gtttttggtcaagttttatatggttttgagtctcttttg 43  Q
    |||||||||||||||||||||||||||||||||||||||    
T  23136377 gtttttggtcaagttttatatggttttgagtctcttttg 23136339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 35; E-Value: 0.00000000001
Query Start/End: Original strand, 5 - 43
Target Start/End: Complemental strand, 18809752 - 18809714
Alignment:
Q  5 gtttttggtcaagttttatatggttttgagtctcttttg 43  Q
    ||||| |||||||||||||||||||||||||||||||||    
T  18809752 gttttgggtcaagttttatatggttttgagtctcttttg 18809714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 35; E-Value: 0.00000000001
Query Start/End: Original strand, 5 - 43
Target Start/End: Complemental strand, 23610345 - 23610307
Alignment:
Q  5 gtttttggtcaagttttatatggttttgagtctcttttg 43  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  23610345 gtttttggtcaagttttatatggctttgagtctcttttg 23610307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 35; E-Value: 0.00000000001
Query Start/End: Original strand, 5 - 43
Target Start/End: Original strand, 23711366 - 23711404
Alignment:
Q  5 gtttttggtcaagttttatatggttttgagtctcttttg 43  Q
    ||||| |||||||||||||||||||||||||||||||||    
T  23711366 gttttgggtcaagttttatatggttttgagtctcttttg 23711404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.00000000001
Query Start/End: Original strand, 5 - 43
Target Start/End: Complemental strand, 26506188 - 26506150
Alignment:
Q  5 gtttttggtcaagttttatatggttttgagtctcttttg 43  Q
    ||||| |||||||||||||||||||||||||||||||||    
T  26506188 gttttgggtcaagttttatatggttttgagtctcttttg 26506150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.00000000001
Query Start/End: Original strand, 5 - 43
Target Start/End: Original strand, 27920117 - 27920155
Alignment:
Q  5 gtttttggtcaagttttatatggttttgagtctcttttg 43  Q
    ||||| |||||||||||||||||||||||||||||||||    
T  27920117 gttttgggtcaagttttatatggttttgagtctcttttg 27920155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.00000000001
Query Start/End: Original strand, 5 - 43
Target Start/End: Complemental strand, 39683125 - 39683087
Alignment:
Q  5 gtttttggtcaagttttatatggttttgagtctcttttg 43  Q
    ||||| |||||||||||||||||||||||||||||||||    
T  39683125 gttttgggtcaagttttatatggttttgagtctcttttg 39683087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.00000000004
Query Start/End: Original strand, 6 - 43
Target Start/End: Complemental strand, 21368977 - 21368940
Alignment:
Q  6 tttttggtcaagttttatatggttttgagtctcttttg 43  Q
    |||| |||||||||||||||||||||||||||||||||    
T  21368977 ttttgggtcaagttttatatggttttgagtctcttttg 21368940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.00000000004
Query Start/End: Original strand, 6 - 43
Target Start/End: Complemental strand, 38968288 - 38968251
Alignment:
Q  6 tttttggtcaagttttatatggttttgagtctcttttg 43  Q
    |||| |||||||||||||||||||||||||||||||||    
T  38968288 ttttgggtcaagttttatatggttttgagtctcttttg 38968251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 31; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 43
Target Start/End: Complemental strand, 23131671 - 23131633
Alignment:
Q  5 gtttttggtcaagttttatatggttttgagtctcttttg 43  Q
    ||||| |||||||||||||||||||| ||||||||||||    
T  23131671 gttttgggtcaagttttatatggtttcgagtctcttttg 23131633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 43
Target Start/End: Complemental strand, 23134138 - 23134100
Alignment:
Q  5 gtttttggtcaagttttatatggttttgagtctcttttg 43  Q
    ||||| |||||||||||||||||||| ||||||||||||    
T  23134138 gttttgggtcaagttttatatggtttcgagtctcttttg 23134100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 43
Target Start/End: Complemental strand, 26508666 - 26508628
Alignment:
Q  5 gtttttggtcaagttttatatggttttgagtctcttttg 43  Q
    ||||| ||||||||||||||||||||||||||| |||||    
T  26508666 gttttgggtcaagttttatatggttttgagtctgttttg 26508628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 43
Target Start/End: Complemental strand, 28577914 - 28577876
Alignment:
Q  5 gtttttggtcaagttttatatggttttgagtctcttttg 43  Q
    ||||| ||||||||||||||||| |||||||||||||||    
T  28577914 gttttgggtcaagttttatatggatttgagtctcttttg 28577876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 43
Target Start/End: Original strand, 32038850 - 32038888
Alignment:
Q  5 gtttttggtcaagttttatatggttttgagtctcttttg 43  Q
    ||||| ||||||||||||||||||||||||||| |||||    
T  32038850 gttttgggtcaagttttatatggttttgagtcttttttg 32038888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.00000001
Query Start/End: Original strand, 6 - 43
Target Start/End: Complemental strand, 9785451 - 9785414
Alignment:
Q  6 tttttggtcaagttttatatggttttgagtctcttttg 43  Q
    |||| |||||||||||||||| ||||||||||||||||    
T  9785451 ttttgggtcaagttttatatgattttgagtctcttttg 9785414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.00000001
Query Start/End: Original strand, 5 - 42
Target Start/End: Original strand, 24897548 - 24897585
Alignment:
Q  5 gtttttggtcaagttttatatggttttgagtctctttt 42  Q
    ||||| ||||||||||||| ||||||||||||||||||    
T  24897548 gttttgggtcaagttttatgtggttttgagtctctttt 24897585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.00000001
Query Start/End: Original strand, 5 - 42
Target Start/End: Original strand, 24904985 - 24905022
Alignment:
Q  5 gtttttggtcaagttttatatggttttgagtctctttt 42  Q
    ||||| ||||||||||||| ||||||||||||||||||    
T  24904985 gttttgggtcaagttttatgtggttttgagtctctttt 24905022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.00000004
Query Start/End: Original strand, 6 - 42
Target Start/End: Original strand, 24900032 - 24900068
Alignment:
Q  6 tttttggtcaagttttatatggttttgagtctctttt 42  Q
    |||| ||||||||||||| ||||||||||||||||||    
T  24900032 ttttgggtcaagttttatgtggttttgagtctctttt 24900068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.00000004
Query Start/End: Original strand, 6 - 42
Target Start/End: Original strand, 24902509 - 24902545
Alignment:
Q  6 tttttggtcaagttttatatggttttgagtctctttt 42  Q
    |||| ||||||||||||| ||||||||||||||||||    
T  24902509 ttttgggtcaagttttatgtggttttgagtctctttt 24902545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 28; E-Value: 0.0000001
Query Start/End: Original strand, 12 - 43
Target Start/End: Original strand, 21335641 - 21335672
Alignment:
Q  12 gtcaagttttatatggttttgagtctcttttg 43  Q
    ||||| ||||||||||||||||||||||||||    
T  21335641 gtcaaattttatatggttttgagtctcttttg 21335672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 27; E-Value: 0.0000006
Query Start/End: Original strand, 5 - 43
Target Start/End: Complemental strand, 22690548 - 22690511
Alignment:
Q  5 gtttttggtcaagttttatatggttttgagtctcttttg 43  Q
    ||||| |||||||||||||| ||||||||||||||||||    
T  22690548 gttttgggtcaagttttata-ggttttgagtctcttttg 22690511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 27; E-Value: 0.0000006
Query Start/End: Original strand, 5 - 43
Target Start/End: Complemental strand, 22695144 - 22695107
Alignment:
Q  5 gtttttggtcaagttttatatggttttgagtctcttttg 43  Q
    ||||| |||||||||||||| ||||||||||||||||||    
T  22695144 gttttgggtcaagttttata-ggttttgagtctcttttg 22695107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 27; E-Value: 0.0000006
Query Start/End: Original strand, 5 - 35
Target Start/End: Original strand, 23968804 - 23968834
Alignment:
Q  5 gtttttggtcaagttttatatggttttgagt 35  Q
    ||||| |||||||||||||||||||||||||    
T  23968804 gttttgggtcaagttttatatggttttgagt 23968834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 27; E-Value: 0.0000006
Query Start/End: Original strand, 5 - 35
Target Start/End: Complemental strand, 27852296 - 27852266
Alignment:
Q  5 gtttttggtcaagttttatatggttttgagt 35  Q
    ||||| |||||||||||||||||||||||||    
T  27852296 gttttgggtcaagttttatatggttttgagt 27852266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 27; E-Value: 0.0000006
Query Start/End: Original strand, 5 - 43
Target Start/End: Original strand, 34401875 - 34401913
Alignment:
Q  5 gtttttggtcaagttttatatggttttgagtctcttttg 43  Q
    ||||| |||||| ||||||||||||| ||||||||||||    
T  34401875 gttttgggtcaaattttatatggtttcgagtctcttttg 34401913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 39; Significance: 0.00000000000004; HSPs: 13)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 39; E-Value: 0.00000000000004
Query Start/End: Original strand, 5 - 43
Target Start/End: Original strand, 21922642 - 21922680
Alignment:
Q  5 gtttttggtcaagttttatatggttttgagtctcttttg 43  Q
    |||||||||||||||||||||||||||||||||||||||    
T  21922642 gtttttggtcaagttttatatggttttgagtctcttttg 21922680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 35; E-Value: 0.00000000001
Query Start/End: Original strand, 5 - 43
Target Start/End: Complemental strand, 13989675 - 13989637
Alignment:
Q  5 gtttttggtcaagttttatatggttttgagtctcttttg 43  Q
    ||||| |||||||||||||||||||||||||||||||||    
T  13989675 gttttgggtcaagttttatatggttttgagtctcttttg 13989637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 35; E-Value: 0.00000000001
Query Start/End: Original strand, 5 - 43
Target Start/End: Original strand, 14237794 - 14237832
Alignment:
Q  5 gtttttggtcaagttttatatggttttgagtctcttttg 43  Q
    ||||| |||||||||||||||||||||||||||||||||    
T  14237794 gttttgggtcaagttttatatggttttgagtctcttttg 14237832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 35; E-Value: 0.00000000001
Query Start/End: Original strand, 5 - 43
Target Start/End: Original strand, 21474437 - 21474475
Alignment:
Q  5 gtttttggtcaagttttatatggttttgagtctcttttg 43  Q
    ||||| |||||||||||||||||||||||||||||||||    
T  21474437 gttttgggtcaagttttatatggttttgagtctcttttg 21474475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 35; E-Value: 0.00000000001
Query Start/End: Original strand, 5 - 43
Target Start/End: Complemental strand, 21841580 - 21841542
Alignment:
Q  5 gtttttggtcaagttttatatggttttgagtctcttttg 43  Q
    |||||||||||| ||||||||||||||||||||||||||    
T  21841580 gtttttggtcaaattttatatggttttgagtctcttttg 21841542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 35; E-Value: 0.00000000001
Query Start/End: Original strand, 5 - 43
Target Start/End: Complemental strand, 41373283 - 41373245
Alignment:
Q  5 gtttttggtcaagttttatatggttttgagtctcttttg 43  Q
    ||||| |||||||||||||||||||||||||||||||||    
T  41373283 gttttgggtcaagttttatatggttttgagtctcttttg 41373245  T

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Target: chr1; HSP #7
Raw Score: 34; E-Value: 0.00000000004
Query Start/End: Original strand, 6 - 43
Target Start/End: Complemental strand, 16362727 - 16362690
Alignment:
Q  6 tttttggtcaagttttatatggttttgagtctcttttg 43  Q
    |||| |||||||||||||||||||||||||||||||||    
T  16362727 ttttgggtcaagttttatatggttttgagtctcttttg 16362690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 34; E-Value: 0.00000000004
Query Start/End: Original strand, 6 - 43
Target Start/End: Original strand, 23593085 - 23593122
Alignment:
Q  6 tttttggtcaagttttatatggttttgagtctcttttg 43  Q
    |||| |||||||||||||||||||||||||||||||||    
T  23593085 ttttgggtcaagttttatatggttttgagtctcttttg 23593122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.00000000004
Query Start/End: Original strand, 6 - 43
Target Start/End: Complemental strand, 51083086 - 51083049
Alignment:
Q  6 tttttggtcaagttttatatggttttgagtctcttttg 43  Q
    |||| |||||||||||||||||||||||||||||||||    
T  51083086 ttttgggtcaagttttatatggttttgagtctcttttg 51083049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 31; E-Value: 0.000000002
Query Start/End: Original strand, 11 - 41
Target Start/End: Original strand, 24719882 - 24719912
Alignment:
Q  11 ggtcaagttttatatggttttgagtctcttt 41  Q
    |||||||||||||||||||||||||||||||    
T  24719882 ggtcaagttttatatggttttgagtctcttt 24719912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 30; E-Value: 0.00000001
Query Start/End: Original strand, 13 - 42
Target Start/End: Complemental strand, 20588541 - 20588512
Alignment:
Q  13 tcaagttttatatggttttgagtctctttt 42  Q
    ||||||||||||||||||||||||||||||    
T  20588541 tcaagttttatatggttttgagtctctttt 20588512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 30; E-Value: 0.00000001
Query Start/End: Original strand, 13 - 42
Target Start/End: Complemental strand, 20593079 - 20593050
Alignment:
Q  13 tcaagttttatatggttttgagtctctttt 42  Q
    ||||||||||||||||||||||||||||||    
T  20593079 tcaagttttatatggttttgagtctctttt 20593050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 27; E-Value: 0.0000006
Query Start/End: Original strand, 5 - 43
Target Start/End: Original strand, 4596027 - 4596065
Alignment:
Q  5 gtttttggtcaagttttatatggttttgagtctcttttg 43  Q
    ||||| ||||||||||||||||||||| || ||||||||    
T  4596027 gttttgggtcaagttttatatggttttcagactcttttg 4596065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0363 (Bit Score: 38; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0363
Description:

Target: scaffold0363; HSP #1
Raw Score: 38; E-Value: 0.0000000000002
Query Start/End: Original strand, 6 - 43
Target Start/End: Complemental strand, 10054 - 10017
Alignment:
Q  6 tttttggtcaagttttatatggttttgagtctcttttg 43  Q
    ||||||||||||||||||||||||||||||||||||||    
T  10054 tttttggtcaagttttatatggttttgagtctcttttg 10017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0454 (Bit Score: 35; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0454
Description:

Target: scaffold0454; HSP #1
Raw Score: 35; E-Value: 0.00000000001
Query Start/End: Original strand, 5 - 43
Target Start/End: Complemental strand, 392 - 354
Alignment:
Q  5 gtttttggtcaagttttatatggttttgagtctcttttg 43  Q
    |||||||||||| ||||||||||||||||||||||||||    
T  392 gtttttggtcaaattttatatggttttgagtctcttttg 354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0254 (Bit Score: 35; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0254
Description:

Target: scaffold0254; HSP #1
Raw Score: 35; E-Value: 0.00000000001
Query Start/End: Original strand, 5 - 43
Target Start/End: Complemental strand, 21560 - 21522
Alignment:
Q  5 gtttttggtcaagttttatatggttttgagtctcttttg 43  Q
    ||||| |||||||||||||||||||||||||||||||||    
T  21560 gttttgggtcaagttttatatggttttgagtctcttttg 21522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0134 (Bit Score: 35; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0134
Description:

Target: scaffold0134; HSP #1
Raw Score: 35; E-Value: 0.00000000001
Query Start/End: Original strand, 5 - 43
Target Start/End: Complemental strand, 38631 - 38593
Alignment:
Q  5 gtttttggtcaagttttatatggttttgagtctcttttg 43  Q
    ||||| |||||||||||||||||||||||||||||||||    
T  38631 gttttgggtcaagttttatatggttttgagtctcttttg 38593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 35; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 35; E-Value: 0.00000000001
Query Start/End: Original strand, 5 - 43
Target Start/End: Original strand, 62219 - 62257
Alignment:
Q  5 gtttttggtcaagttttatatggttttgagtctcttttg 43  Q
    ||||| |||||||||||||||||||||||||||||||||    
T  62219 gttttgggtcaagttttatatggttttgagtctcttttg 62257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 35; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 35; E-Value: 0.00000000001
Query Start/End: Original strand, 5 - 43
Target Start/End: Complemental strand, 12099 - 12061
Alignment:
Q  5 gtttttggtcaagttttatatggttttgagtctcttttg 43  Q
    ||||| |||||||||||||||||||||||||||||||||    
T  12099 gttttgggtcaagttttatatggttttgagtctcttttg 12061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 35; Significance: 0.00000000001; HSPs: 6)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 35; E-Value: 0.00000000001
Query Start/End: Original strand, 5 - 43
Target Start/End: Complemental strand, 135022 - 134984
Alignment:
Q  5 gtttttggtcaagttttatatggttttgagtctcttttg 43  Q
    |||||||||||||||||||||||||| ||||||||||||    
T  135022 gtttttggtcaagttttatatggtttcgagtctcttttg 134984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #2
Raw Score: 35; E-Value: 0.00000000001
Query Start/End: Original strand, 5 - 43
Target Start/End: Complemental strand, 137491 - 137453
Alignment:
Q  5 gtttttggtcaagttttatatggttttgagtctcttttg 43  Q
    |||||||||||||||||||||||||| ||||||||||||    
T  137491 gtttttggtcaagttttatatggtttcgagtctcttttg 137453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #3
Raw Score: 35; E-Value: 0.00000000001
Query Start/End: Original strand, 5 - 43
Target Start/End: Complemental strand, 139960 - 139922
Alignment:
Q  5 gtttttggtcaagttttatatggttttgagtctcttttg 43  Q
    |||||||||||||||||||||||||| ||||||||||||    
T  139960 gtttttggtcaagttttatatggtttcgagtctcttttg 139922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #4
Raw Score: 35; E-Value: 0.00000000001
Query Start/End: Original strand, 5 - 43
Target Start/End: Complemental strand, 142429 - 142391
Alignment:
Q  5 gtttttggtcaagttttatatggttttgagtctcttttg 43  Q
    |||||||||||||||||||||||||| ||||||||||||    
T  142429 gtttttggtcaagttttatatggtttcgagtctcttttg 142391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #5
Raw Score: 35; E-Value: 0.00000000001
Query Start/End: Original strand, 5 - 43
Target Start/End: Complemental strand, 144898 - 144860
Alignment:
Q  5 gtttttggtcaagttttatatggttttgagtctcttttg 43  Q
    |||||||||||||||||||||||||| ||||||||||||    
T  144898 gtttttggtcaagttttatatggtttcgagtctcttttg 144860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #6
Raw Score: 27; E-Value: 0.0000006
Query Start/End: Original strand, 5 - 35
Target Start/End: Original strand, 3422 - 3452
Alignment:
Q  5 gtttttggtcaagttttatatggttttgagt 35  Q
    ||||| |||||||||||||||||||||||||    
T  3422 gttttgggtcaagttttatatggttttgagt 3452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 35; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 35; E-Value: 0.00000000001
Query Start/End: Original strand, 5 - 43
Target Start/End: Complemental strand, 95220 - 95182
Alignment:
Q  5 gtttttggtcaagttttatatggttttgagtctcttttg 43  Q
    ||||| |||||||||||||||||||||||||||||||||    
T  95220 gttttgggtcaagttttatatggttttgagtctcttttg 95182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0414 (Bit Score: 34; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0414
Description:

Target: scaffold0414; HSP #1
Raw Score: 34; E-Value: 0.00000000004
Query Start/End: Original strand, 6 - 43
Target Start/End: Original strand, 11530 - 11567
Alignment:
Q  6 tttttggtcaagttttatatggttttgagtctcttttg 43  Q
    |||| |||||||||||||||||||||||||||||||||    
T  11530 ttttgggtcaagttttatatggttttgagtctcttttg 11567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0203 (Bit Score: 34; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0203
Description:

Target: scaffold0203; HSP #1
Raw Score: 34; E-Value: 0.00000000004
Query Start/End: Original strand, 6 - 43
Target Start/End: Original strand, 18309 - 18346
Alignment:
Q  6 tttttggtcaagttttatatggttttgagtctcttttg 43  Q
    |||| |||||||||||||||||||||||||||||||||    
T  18309 ttttgggtcaagttttatatggttttgagtctcttttg 18346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109 (Bit Score: 34; Significance: 0.00000000004; HSPs: 2)
Name: scaffold0109
Description:

Target: scaffold0109; HSP #1
Raw Score: 34; E-Value: 0.00000000004
Query Start/End: Original strand, 6 - 43
Target Start/End: Original strand, 159 - 196
Alignment:
Q  6 tttttggtcaagttttatatggttttgagtctcttttg 43  Q
    |||| |||||||||||||||||||||||||||||||||    
T  159 ttttgggtcaagttttatatggttttgagtctcttttg 196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109; HSP #2
Raw Score: 31; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 43
Target Start/End: Original strand, 5461 - 5499
Alignment:
Q  5 gtttttggtcaagttttatatggttttgagtctcttttg 43  Q
    ||||| |||||||||||||||| ||||||||||||||||    
T  5461 gttttgggtcaagttttatatgattttgagtctcttttg 5499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0232 (Bit Score: 31; Significance: 0.000000002; HSPs: 1)
Name: scaffold0232
Description:

Target: scaffold0232; HSP #1
Raw Score: 31; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 43
Target Start/End: Complemental strand, 4139 - 4101
Alignment:
Q  5 gtttttggtcaagttttatatggttttgagtctcttttg 43  Q
    ||||| |||||||||||||||| ||||||||||||||||    
T  4139 gttttgggtcaagttttatatgattttgagtctcttttg 4101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098 (Bit Score: 31; Significance: 0.000000002; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 31; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 43
Target Start/End: Complemental strand, 40012 - 39982
Alignment:
Q  13 tcaagttttatatggttttgagtctcttttg 43  Q
    |||||||||||||||||||||||||||||||    
T  40012 tcaagttttatatggttttgagtctcttttg 39982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0695 (Bit Score: 30; Significance: 0.00000001; HSPs: 1)
Name: scaffold0695
Description:

Target: scaffold0695; HSP #1
Raw Score: 30; E-Value: 0.00000001
Query Start/End: Original strand, 6 - 43
Target Start/End: Complemental strand, 6753 - 6716
Alignment:
Q  6 tttttggtcaagttttatatggttttgagtctcttttg 43  Q
    |||| |||||||||||||||| ||||||||||||||||    
T  6753 ttttgggtcaagttttatatgattttgagtctcttttg 6716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0630 (Bit Score: 30; Significance: 0.00000001; HSPs: 1)
Name: scaffold0630
Description:

Target: scaffold0630; HSP #1
Raw Score: 30; E-Value: 0.00000001
Query Start/End: Original strand, 6 - 43
Target Start/End: Complemental strand, 8933 - 8896
Alignment:
Q  6 tttttggtcaagttttatatggttttgagtctcttttg 43  Q
    |||| |||||||||||| ||||||||||||||||||||    
T  8933 ttttgggtcaagttttaaatggttttgagtctcttttg 8896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0146 (Bit Score: 30; Significance: 0.00000001; HSPs: 1)
Name: scaffold0146
Description:

Target: scaffold0146; HSP #1
Raw Score: 30; E-Value: 0.00000001
Query Start/End: Original strand, 6 - 43
Target Start/End: Complemental strand, 22897 - 22860
Alignment:
Q  6 tttttggtcaagttttatatggttttgagtctcttttg 43  Q
    |||| |||||| ||||||||||||||||||||||||||    
T  22897 ttttgggtcaatttttatatggttttgagtctcttttg 22860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0063 (Bit Score: 30; Significance: 0.00000001; HSPs: 2)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 30; E-Value: 0.00000001
Query Start/End: Original strand, 6 - 43
Target Start/End: Original strand, 39092 - 39129
Alignment:
Q  6 tttttggtcaagttttatatggttttgagtctcttttg 43  Q
    |||| ||| |||||||||||||||||||||||||||||    
T  39092 ttttgggtaaagttttatatggttttgagtctcttttg 39129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0063; HSP #2
Raw Score: 27; E-Value: 0.0000006
Query Start/End: Original strand, 6 - 40
Target Start/End: Complemental strand, 62588 - 62554
Alignment:
Q  6 tttttggtcaagttttatatggttttgagtctctt 40  Q
    |||| ||||||||||||||||||||||||| ||||    
T  62588 ttttgggtcaagttttatatggttttgagtgtctt 62554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0575 (Bit Score: 28; Significance: 0.0000001; HSPs: 1)
Name: scaffold0575
Description:

Target: scaffold0575; HSP #1
Raw Score: 28; E-Value: 0.0000001
Query Start/End: Original strand, 12 - 43
Target Start/End: Original strand, 5516 - 5547
Alignment:
Q  12 gtcaagttttatatggttttgagtctcttttg 43  Q
    ||||||||||||||| ||||||||||||||||    
T  5516 gtcaagttttatatgattttgagtctcttttg 5547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0431 (Bit Score: 28; Significance: 0.0000001; HSPs: 1)
Name: scaffold0431
Description:

Target: scaffold0431; HSP #1
Raw Score: 28; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 40
Target Start/End: Complemental strand, 5501 - 5466
Alignment:
Q  5 gtttttggtcaagttttatatggttttgagtctctt 40  Q
    ||||| ||||||||||||||||||||||||| ||||    
T  5501 gttttgggtcaagttttatatggttttgagtgtctt 5466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0859 (Bit Score: 27; Significance: 0.0000006; HSPs: 1)
Name: scaffold0859
Description:

Target: scaffold0859; HSP #1
Raw Score: 27; E-Value: 0.0000006
Query Start/End: Original strand, 5 - 35
Target Start/End: Complemental strand, 4404 - 4374
Alignment:
Q  5 gtttttggtcaagttttatatggttttgagt 35  Q
    ||||| |||||||||||||||||||||||||    
T  4404 gttttgggtcaagttttatatggttttgagt 4374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0546 (Bit Score: 27; Significance: 0.0000006; HSPs: 1)
Name: scaffold0546
Description:

Target: scaffold0546; HSP #1
Raw Score: 27; E-Value: 0.0000006
Query Start/End: Original strand, 5 - 43
Target Start/End: Complemental strand, 7846 - 7808
Alignment:
Q  5 gtttttggtcaagttttatatggttttgagtctcttttg 43  Q
    ||||| ||||||||||||| || ||||||||||||||||    
T  7846 gttttgggtcaagttttatttgtttttgagtctcttttg 7808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0401 (Bit Score: 27; Significance: 0.0000006; HSPs: 1)
Name: scaffold0401
Description:

Target: scaffold0401; HSP #1
Raw Score: 27; E-Value: 0.0000006
Query Start/End: Original strand, 5 - 35
Target Start/End: Complemental strand, 8692 - 8662
Alignment:
Q  5 gtttttggtcaagttttatatggttttgagt 35  Q
    ||||| |||||||||||||||||||||||||    
T  8692 gttttgggtcaagttttatatggttttgagt 8662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0369 (Bit Score: 27; Significance: 0.0000006; HSPs: 1)
Name: scaffold0369
Description:

Target: scaffold0369; HSP #1
Raw Score: 27; E-Value: 0.0000006
Query Start/End: Original strand, 13 - 43
Target Start/End: Original strand, 16128 - 16158
Alignment:
Q  13 tcaagttttatatggttttgagtctcttttg 43  Q
    |||||||||||||||||||||||||| ||||    
T  16128 tcaagttttatatggttttgagtctcatttg 16158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 27; Significance: 0.0000006; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 27; E-Value: 0.0000006
Query Start/End: Original strand, 5 - 35
Target Start/End: Original strand, 10109 - 10139
Alignment:
Q  5 gtttttggtcaagttttatatggttttgagt 35  Q
    ||||| |||||||||||||||||||||||||    
T  10109 gttttgggtcaagttttatatggttttgagt 10139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 27; Significance: 0.0000006; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 27; E-Value: 0.0000006
Query Start/End: Original strand, 5 - 35
Target Start/End: Complemental strand, 33325 - 33295
Alignment:
Q  5 gtttttggtcaagttttatatggttttgagt 35  Q
    |||||||||||||||||||| ||||||||||    
T  33325 gtttttggtcaagttttatacggttttgagt 33295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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