View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4304-Insertion-27 (Length: 209)
Name: NF4304-Insertion-27
Description: NF4304
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4304-Insertion-27 |
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Alignment Details
Target: chr4 (Bit Score: 122; Significance: 9e-63; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 122; E-Value: 9e-63
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 6475909 - 6476050
Alignment:
| Q |
1 |
agagaatgaatgataacgaaataaagtgactcctccaaagtgaagaatgtaaatctaacgcagtttgttatatacatccatgcatgttatcagaatccaa |
100 |
Q |
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| T |
6475909 |
agagaatgaatgataaagaaataaagtgactcctccaaagtgaagaatgtaaatctaacgcggtttgttatatacatccatgcatgttatcataatcaaa |
6476008 |
T |
|
| Q |
101 |
gtcattgatttttcaataaactagttataaatctggaaatgt |
142 |
Q |
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|||||||||||||||||||||| ||||||||||||||||||| |
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| T |
6476009 |
gtcattgatttttcaataaactggttataaatctggaaatgt |
6476050 |
T |
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