View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4305_low_1 (Length: 263)
Name: NF4305_low_1
Description: NF4305
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4305_low_1 |
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Alignment Details
Target: chr2 (Bit Score: 197; Significance: 1e-107; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 1 - 250
Target Start/End: Original strand, 5020036 - 5020285
Alignment:
| Q |
1 |
aatgaatttatcaaataaacttgtttttgaaatatcattttctcttcaacttatttttcaaaatgtataaaagggatatataatatgtaaattatataaa |
100 |
Q |
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| T |
5020036 |
aatgaatttatcaaataaacttgcttttgaaatatcattttctcttcaacttatttttcaaaatgtataaaagggatttataatatgtaaagtatataaa |
5020135 |
T |
|
| Q |
101 |
atttgttattttagtctttttgttgttaagatactaaggatatgtttgctacacatgatagagatatcatatcttgatttaatccggtgttttgtagacc |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||| | ||||||||||||||||||| |||| |
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| T |
5020136 |
atttgttattttagtctttttgttgttaagatactaaggatctgtttggtacacatgatagagatatcatatcctaatttaatccggtgttttgtggacc |
5020235 |
T |
|
| Q |
201 |
aatnnnnnnngatacattaaactcatttttaatcctatcttactcaccct |
250 |
Q |
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||| |||||||||||||||||||||||||||||||||||||||| |
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| T |
5020236 |
aataaaaaaggatacattaaactcatttttaatcctatcttactcaccct |
5020285 |
T |
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