View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4306-Insertion-39 (Length: 121)
Name: NF4306-Insertion-39
Description: NF4306
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4306-Insertion-39 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 100; Significance: 6e-50; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 100; E-Value: 6e-50
Query Start/End: Original strand, 6 - 121
Target Start/End: Complemental strand, 45222303 - 45222189
Alignment:
| Q |
6 |
catcaatctcacacgtcttttgtcttttttattattggctaccattcttaagagtggttatcaacccaatttggtcacttttaatacaattatcaatggt |
105 |
Q |
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| T |
45222303 |
catcaatctcacacggcttttg-ctttttcattattggctaccattcttaagagtggttatcaacccaatttggtcacttttaatacaattatcaatggt |
45222205 |
T |
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| Q |
106 |
ttttgtatcaatggta |
121 |
Q |
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|||||||||||||||| |
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| T |
45222204 |
ttttgtatcaatggta |
45222189 |
T |
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